Cow genome map

Conread name: LyN1-MLN01E060086

Conread position: 1-143
Cow position: chr1:21720563-21720703 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 104, 87

Conread position: 1-181
Cow position: chr1:33712418-33712598 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 145
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 104, 137

Conread position: 1-201
Cow position: chr1:63502203-63502406 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 103, 0

Conread position: 1-220
Cow position: chr1:72981619-72981840 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-293
Cow position: chr1:40512694-40512410 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 78

Conread position: 1-305
Cow position: chr1:88269859-88269550 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 220
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 102, 158

Conread position: 1-349
Cow position: chr1:55321789-55321441 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 111

Conread position: 1-355
Cow position: chr1:57366780-57366421 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 272

Conread position: 1-361
Cow position: chr1:12061861-12061506 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 25

Conread position: 1-365
Cow position: chr1:30519042-30519406 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 56

Conread position: 1-375
Cow position: chr1:48246196-48246556 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 91

Conread position: 1-376
Cow position: chr1:43571056-43570690 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 78

Conread position: 1-380
Cow position: chr1:82366531-82366913 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 38

Conread position: 1-381
Cow position: chr1:8825402-8825779 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 72

Conread position: 1-381
Cow position: chr1:15026708-15027091 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 156

Conread position: 1-381
Cow position: chr1:21999605-21999224 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-381
Cow position: chr1:22842998-22843372 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 261
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 184, 38

Conread position: 1-381
Cow position: chr1:23052143-23052504 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 269
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 104, 32

Conread position: 1-381
Cow position: chr1:25179679-25179297 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 16

Conread position: 1-381
Cow position: chr1:28873426-28873810 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr1:31403149-31402761 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 225

Conread position: 1-381
Cow position: chr1:33551276-33551656 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr1:49973839-49973458 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 241

Conread position: 1-381
Cow position: chr1:56143985-56143602 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 236

Conread position: 1-381
Cow position: chr1:58336187-58336568 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 239

Conread position: 1-381
Cow position: chr1:63605428-63605046 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 243

Conread position: 1-381
Cow position: chr1:65386680-65387058 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 25

Conread position: 1-381
Cow position: chr1:69922086-69921705 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-381
Cow position: chr1:72081130-72081496 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 47

Conread position: 1-381
Cow position: chr1:72186528-72186149 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 159

Conread position: 1-381
Cow position: chr1:76752301-76751916 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 243

Conread position: 1-381
Cow position: chr1:79456621-79456240 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 242

Conread position: 1-381
Cow position: chr1:82923827-82923457 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 158

Conread position: 1-381
Cow position: chr1:88131123-88131506 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr1:91892771-91892386 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 243

Conread position: 1-381
Cow position: chr1:93854873-93855249 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 163

Conread position: 1-381
Cow position: chr1:94660034-94660405 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 78

Conread position: 1-381
Cow position: chr1:102434687-102434308 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-382
Cow position: chr1:3385669-3385286 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 116

Conread position: 1-386
Cow position: chr1:30534672-30534283 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-386
Cow position: chr1:52358925-52358537 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 14

Conread position: 1-386
Cow position: chr1:67287180-67287558 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 78

Conread position: 1-386
Cow position: chr1:68607195-68606806 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 124

Conread position: 1-386
Cow position: chr1:73070704-73070320 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 238

Conread position: 1-395
Cow position: chr1:67315296-67315682 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 269
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 207, 34

Conread position: 2-113
Cow position: chr1:56193579-56193467 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 103, 0

Conread position: 2-245
Cow position: chr1:31330050-31329796 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 77, 246

Conread position: 2-320
Cow position: chr1:85882351-85882665 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 71

Conread position: 2-341
Cow position: chr1:55156650-55156312 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 240
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 95, 11

Conread position: 2-354
Cow position: chr1:22905131-22905467 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 239
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 90, 58

Conread position: 2-356
Cow position: chr1:67327912-67327566 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 246
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 272, 96

Conread position: 2-361
Cow position: chr1:18027417-18027047 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 346

Conread position: 2-381
Cow position: chr1:31365736-31365360 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 160

Conread position: 2-381
Cow position: chr1:69403333-69403716 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 236

Conread position: 2-384
Cow position: chr1:80358834-80358448 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 237

Conread position: 3-341
Cow position: chr1:18013149-18012815 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 232
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 102, 159

Conread position: 3-356
Cow position: chr1:43985731-43985374 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 239
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 6, 84

Conread position: 3-377
Cow position: chr1:99913770-99914149 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 236

Conread position: 3-381
Cow position: chr1:42736805-42737188 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 236

Conread position: 4-290
Cow position: chr1:69250634-69250925 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 193
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 98, 22

Conread position: 4-377
Cow position: chr1:33389486-33389861 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 53

Conread position: 4-386
Cow position: chr1:79636582-79636229 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 17

Conread position: 5-354
Cow position: chr1:77511580-77511222 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 36

Conread position: 5-356
Cow position: chr1:86698862-86698511 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 237

Conread position: 5-359
Cow position: chr1:58883712-58883356 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 5-381
Cow position: chr1:17941432-17941054 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 160

Conread position: 5-381
Cow position: chr1:34692581-34692946 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 73

Conread position: 5-381
Cow position: chr1:62244292-62243910 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 240

Conread position: 5-381
Cow position: chr1:76545185-76544806 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 145

Conread position: 5-386
Cow position: chr1:59209801-59209415 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 5-386
Cow position: chr1:97226355-97225976 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 219

Conread position: 6-167
Cow position: chr1:61309362-61309524 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 130
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 99, 0

Conread position: 6-190
Cow position: chr1:30283192-30283008 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 99, 153

Conread position: 6-215
Cow position: chr1:89770311-89770096 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 137

Conread position: 6-222
Cow position: chr1:85780423-85780205 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 6-258
Cow position: chr1:28711267-28711520 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-307
Cow position: chr1:18880042-18879741 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 176

Conread position: 6-323
Cow position: chr1:20829240-20829558 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-380
Cow position: chr1:9382197-9381819 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 13

Conread position: 6-385
Cow position: chr1:40574564-40574947 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr1:5355477-5355861 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr1:8554679-8555063 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 38

Conread position: 6-386
Cow position: chr1:11291755-11291375 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 169

Conread position: 6-386
Cow position: chr1:13450557-13450939 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 111

Conread position: 6-386
Cow position: chr1:17012388-17012004 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 231

Conread position: 6-386
Cow position: chr1:17036206-17035824 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 73

Conread position: 6-386
Cow position: chr1:29034652-29035023 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 10

Conread position: 6-386
Cow position: chr1:29362647-29363032 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 177

Conread position: 6-386
Cow position: chr1:31397041-31397427 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 267

Conread position: 6-386
Cow position: chr1:33851628-33852020 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 240

Conread position: 6-386
Cow position: chr1:39544120-39544501 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 232

Conread position: 6-386
Cow position: chr1:40053706-40054089 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 235

Conread position: 6-386
Cow position: chr1:40684340-40683965 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 44

Conread position: 6-386
Cow position: chr1:53198900-53199275 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 233

Conread position: 6-386
Cow position: chr1:56490201-56490586 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 233

Conread position: 6-386
Cow position: chr1:56723505-56723893 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 162

Conread position: 6-386
Cow position: chr1:60339656-60340034 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 136

Conread position: 6-386
Cow position: chr1:66999377-66999747 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 143

Conread position: 6-386
Cow position: chr1:67834790-67834404 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 139

Conread position: 6-386
Cow position: chr1:69766813-69767189 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr1:71562222-71561838 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr1:82564854-82565238 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr1:82653004-82653400 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 244

Conread position: 6-386
Cow position: chr1:82912793-82912400 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 169

Conread position: 6-386
Cow position: chr1:85792037-85792413 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 91

Conread position: 6-386
Cow position: chr1:86547784-86547407 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 70

Conread position: 6-386
Cow position: chr1:89425924-89426308 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr1:91899347-91899739 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 341

Conread position: 6-386
Cow position: chr1:102549593-102549958 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 126

Conread position: 6-387
Cow position: chr1:21087764-21088149 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 7-386
Cow position: chr1:57424487-57424106 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 20

Conread position: 7-386
Cow position: chr1:95239721-95240103 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 230

Conread position: 12-278
Cow position: chr1:30059278-30059546 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 183
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 106

Conread position: 12-358
Cow position: chr1:57657167-57657504 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 39

Conread position: 14-184
Cow position: chr1:99675370-99675202 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 15-307
Cow position: chr1:24651644-24651940 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 223

Conread position: 15-384
Cow position: chr1:77111657-77111296 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 64

Conread position: 16-386
Cow position: chr1:31418150-31417782 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 79

Conread position: 17-338
Cow position: chr1:7142707-7142390 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 232
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 87

Conread position: 18-377
Cow position: chr1:26518518-26518160 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 134

Conread position: 18-386
Cow position: chr1:56163913-56164284 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 49

Conread position: 19-347
Cow position: chr1:52325769-52325449 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 230
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 189, 101

Conread position: 22-281
Cow position: chr1:98659522-98659254 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 41, 117

Conread position: 22-386
Cow position: chr1:5502338-5502703 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 214

Conread position: 24-365
Cow position: chr1:89481160-89481484 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 133

Conread position: 26-323
Cow position: chr1:54377549-54377255 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 186
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 79, 35

Conread position: 27-349
Cow position: chr1:91751091-91750766 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 216

Conread position: 35-381
Cow position: chr1:25550345-25550691 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 202

Conread position: 44-387
Cow position: chr1:11860846-11860514 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 138

Conread position: 48-328
Cow position: chr1:56937637-56937358 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 127

Conread position: 48-381
Cow position: chr1:84150593-84150928 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 228
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 52, 180

Conread position: 49-381
Cow position: chr1:40308669-40308995 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 189

Conread position: 57-381
Cow position: chr1:21936638-21936314 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 232
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 45, 109

Conread position: 60-381
Cow position: chr1:57263393-57263706 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 219
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 57, 39

Conread position: 73-381
Cow position: chr1:55777003-55777314 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 164

Conread position: 80-366
Cow position: chr1:81842117-81841818 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 197
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 42

Conread position: 86-338
Cow position: chr1:58178554-58178301 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 88

Conread position: 86-386
Cow position: chr1:57973234-57972942 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 210
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 22, 156

Conread position: 99-381
Cow position: chr1:6194684-6194964 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 138

Conread position: 99-386
Cow position: chr1:44044227-44044517 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 138

Conread position: 103-358
Cow position: chr1:9258945-9259202 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 134

Conread position: 103-386
Cow position: chr1:1460735-1460480 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 210
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 106, 134

Conread position: 113-381
Cow position: chr1:57568395-57568665 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 124

Conread position: 120-381
Cow position: chr1:86610614-86610876 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 147, 68

Conread position: 127-386
Cow position: chr1:33896215-33896477 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 110

Conread position: 128-381
Cow position: chr1:24443846-24443592 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 52

Conread position: 130-377
Cow position: chr1:50942789-50942542 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 165
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 107, 92

Conread position: 137-381
Cow position: chr1:76621200-76620952 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 189
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 52, 106

Conread position: 140-386
Cow position: chr1:77117081-77116835 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 102

Conread position: 163-381
Cow position: chr1:29979670-29979452 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 49, 7

Conread position: 181-387
Cow position: chr1:33712621-33712830 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 56

Conread position: 213-360
Cow position: chr1:47541192-47541340 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 105, 28

Conread position: 221-381
Cow position: chr1:62805601-62805447 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 99, 20

Conread position: 240-386
Cow position: chr1:72038965-72038824 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 129, 44

Conread position: 255-386
Cow position: chr1:20423129-20422995 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 63, 83

Conread position: 272-386
Cow position: chr1:18241894-18241780 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 97, 64

Conread position: 277-386
Cow position: chr1:49495602-49495490 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 98
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 43, 61

Conread position: 640-847
Cow position: chr1:31417793-31417582 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 152, 77

Conread position: 640-847
Cow position: chr1:76620958-76620754 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 61, 76

Conread position: 644-846
Cow position: chr1:76751918-76751718 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 159
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 71, 0

Conread position: 644-846
Cow position: chr1:102434310-102434109 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr1:21999226-21999024 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr1:25179299-25179100 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 65, 0

Conread position: 644-847
Cow position: chr1:28873808-28874010 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr1:62805449-62805251 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 69, 0

Conread position: 644-847
Cow position: chr1:65387056-65387249 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr1:79456242-79456040 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 161
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr1:82923459-82923258 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr1:85779710-85779517 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 65, 0

Conread position: 644-847
Cow position: chr1:88131504-88131703 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr1:94660403-94660604 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 645-847
Cow position: chr1:72984232-72984432 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 159
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 64, 0

Conread position: 645-847
Cow position: chr1:99914152-99914353 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 70, 0

Conread position: 650-846
Cow position: chr1:73070321-73070127 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 152
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 59, 0

Conread position: 650-847
Cow position: chr1:5502702-5502896 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 156
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 65, 0

Conread position: 650-847
Cow position: chr1:30534284-30534088 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 158
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 59, 0

Conread position: 651-840
Cow position: chr1:48246567-48246755 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 154
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 62, 0

Conread position: 651-847
Cow position: chr1:69921700-69921505 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 152
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 64, 0

Conread position: 660-847
Cow position: chr1:12061470-12061284 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 148
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 49, 0

Conread position: 1-104
Cow position: chr10:25359775-25359878 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-184
Cow position: chr10:38848088-38848270 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 104, 157

Conread position: 1-213
Cow position: chr10:54978876-54978672 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 104, 78

Conread position: 1-220
Cow position: chr10:32064960-32065186 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 116, 0

Conread position: 1-244
Cow position: chr10:10582179-10582420 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 150
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 104, 91

Conread position: 1-244
Cow position: chr10:54965747-54965512 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 21, 87

Conread position: 1-260
Cow position: chr10:21900405-21900151 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 195
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 110, 43

Conread position: 1-268
Cow position: chr10:17432881-17432620 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 157

Conread position: 1-296
Cow position: chr10:41774857-41774571 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 58, 68

Conread position: 1-362
Cow position: chr10:31524471-31524825 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 175

Conread position: 1-372
Cow position: chr10:3542852-3542485 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 78

Conread position: 1-377
Cow position: chr10:21487291-21487670 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr10:2120637-2120258 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 28

Conread position: 1-381
Cow position: chr10:7281719-7281335 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-381
Cow position: chr10:19511981-19512363 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 40

Conread position: 1-381
Cow position: chr10:22101613-22101991 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 42

Conread position: 1-381
Cow position: chr10:26596986-26597368 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 158

Conread position: 1-381
Cow position: chr10:29846276-29845891 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 239

Conread position: 1-381
Cow position: chr10:30685138-30684760 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 29

Conread position: 1-381
Cow position: chr10:38538128-38537744 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 1-381
Cow position: chr10:38545525-38545163 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 20

Conread position: 1-381
Cow position: chr10:39040926-39040551 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 63

Conread position: 2-103
Cow position: chr10:124687-124788 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 2-229
Cow position: chr10:44294541-44294317 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 174
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 103, 76

Conread position: 2-353
Cow position: chr10:41388739-41388386 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 241
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 16, 245

Conread position: 2-358
Cow position: chr10:14861635-14861979 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 259
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 103, 157

Conread position: 3-215
Cow position: chr10:16476619-16476827 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 56

Conread position: 3-381
Cow position: chr10:8290355-8290731 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 49

Conread position: 4-256
Cow position: chr10:21077276-21077522 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 113, 59

Conread position: 4-323
Cow position: chr10:11821139-11821463 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 229
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 94, 48

Conread position: 4-365
Cow position: chr10:64302384-64302031 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 256
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 94, 29

Conread position: 5-207
Cow position: chr10:28931012-28930809 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 113, 128

Conread position: 5-354
Cow position: chr10:8326917-8326566 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 10

Conread position: 5-365
Cow position: chr10:62408471-62408108 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 234

Conread position: 5-376
Cow position: chr10:32557730-32558100 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 261
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 17, 215

Conread position: 5-381
Cow position: chr10:16925910-16926289 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 232

Conread position: 5-381
Cow position: chr10:38344981-38344607 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 231

Conread position: 5-381
Cow position: chr10:39074740-39075115 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 253
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 109, 16

Conread position: 5-381
Cow position: chr10:57989614-57989237 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 233

Conread position: 5-386
Cow position: chr10:4191865-4191490 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 233

Conread position: 5-386
Cow position: chr10:24977386-24977004 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 108

Conread position: 6-247
Cow position: chr10:32578662-32578903 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 46

Conread position: 6-288
Cow position: chr10:25564884-25564605 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 69

Conread position: 6-323
Cow position: chr10:51952248-51951934 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-381
Cow position: chr10:19715187-19714812 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 20

Conread position: 6-381
Cow position: chr10:21740378-21740001 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 131

Conread position: 6-386
Cow position: chr10:280249-279850 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 61

Conread position: 6-386
Cow position: chr10:5849252-5848869 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 231

Conread position: 6-386
Cow position: chr10:11698617-11699001 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr10:14804210-14804592 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 61

Conread position: 6-386
Cow position: chr10:19495912-19495521 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 131

Conread position: 6-386
Cow position: chr10:28641913-28642291 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 230

Conread position: 6-386
Cow position: chr10:39180157-39180547 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 52

Conread position: 6-386
Cow position: chr10:39879994-39879602 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 270
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 71, 156

Conread position: 6-386
Cow position: chr10:41157821-41158199 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr10:41567476-41567857 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr10:41877292-41877675 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 38

Conread position: 6-386
Cow position: chr10:55093639-55094024 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 233

Conread position: 6-386
Cow position: chr10:56065047-56065431 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 231

Conread position: 8-386
Cow position: chr10:21400295-21399913 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 235

Conread position: 13-374
Cow position: chr10:32316301-32315947 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 248
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 83, 140

Conread position: 13-386
Cow position: chr10:47907311-47907688 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 225

Conread position: 14-366
Cow position: chr10:37770754-37771106 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 224

Conread position: 21-229
Cow position: chr10:39816097-39815888 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 87, 72

Conread position: 21-386
Cow position: chr10:40151851-40151487 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 22

Conread position: 22-334
Cow position: chr10:39779630-39779937 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 213

Conread position: 27-220
Cow position: chr10:42394512-42394714 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 29-229
Cow position: chr10:60193074-60193275 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 76, 153

Conread position: 29-381
Cow position: chr10:14335444-14335096 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 204

Conread position: 30-381
Cow position: chr10:28983314-28982962 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 235
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 30, 34

Conread position: 31-296
Cow position: chr10:288951-288690 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 179
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 229, 107

Conread position: 31-367
Cow position: chr10:41632039-41632365 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 242
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 74, 120

Conread position: 32-350
Cow position: chr10:1377647-1377963 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 206

Conread position: 35-306
Cow position: chr10:28115697-28115428 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 15, 21

Conread position: 38-383
Cow position: chr10:31538076-31538414 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 246
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 60, 41

Conread position: 41-365
Cow position: chr10:14929297-14929614 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 66

Conread position: 49-386
Cow position: chr10:24311926-24311590 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 195
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 160, 58

Conread position: 80-376
Cow position: chr10:29102129-29101837 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 201
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 32

Conread position: 84-381
Cow position: chr10:50135015-50135313 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 89-381
Cow position: chr10:38403729-38403439 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 120, 138

Conread position: 97-381
Cow position: chr10:57482573-57482301 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 112, 14

Conread position: 99-386
Cow position: chr10:58596876-58597145 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 109, 67

Conread position: 100-386
Cow position: chr10:11685176-11684888 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 142

Conread position: 103-381
Cow position: chr10:61927724-61927449 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 195
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 102, 77

Conread position: 110-386
Cow position: chr10:19544886-19544615 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 200, 39

Conread position: 111-381
Cow position: chr10:124872-125145 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 126

Conread position: 118-381
Cow position: chr10:42110902-42111159 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 62, 13

Conread position: 120-309
Cow position: chr10:5676-5865 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 152
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 88, 117

Conread position: 120-386
Cow position: chr10:8340368-8340631 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 21

Conread position: 137-376
Cow position: chr10:46196013-46196258 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 183
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 77, 40

Conread position: 137-381
Cow position: chr10:15084510-15084762 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 79, 105

Conread position: 138-386
Cow position: chr10:29632258-29632009 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 159
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 181, 56

Conread position: 140-384
Cow position: chr10:33347857-33348098 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 192
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 69, 91

Conread position: 164-386
Cow position: chr10:49990974-49991199 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 177
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 39, 72

Conread position: 165-381
Cow position: chr10:20370574-20370367 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 96, 72

Conread position: 170-373
Cow position: chr10:25978650-25978449 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 44, 68

Conread position: 181-335
Cow position: chr10:15860127-15859979 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 194-354
Cow position: chr10:10582420-10582581 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 10, 43

Conread position: 224-381
Cow position: chr10:24262722-24262563 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 129
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 96, 17

Conread position: 241-386
Cow position: chr10:21731237-21731089 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 78, 97

Conread position: 247-386
Cow position: chr10:34285873-34286015 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 71, 91

Conread position: 273-396
Cow position: chr10:27664889-27664763 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 44, 65

Conread position: 274-386
Cow position: chr10:39815896-39815781 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 64

Conread position: 640-847
Cow position: chr10:30684766-30684560 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 75, 0

Conread position: 644-754
Cow position: chr10:19714814-19714705 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 644-840
Cow position: chr10:57989239-57989045 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 73, 0

Conread position: 644-845
Cow position: chr10:38344609-38344409 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 71, 0

Conread position: 644-846
Cow position: chr10:7281337-7281136 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 159
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 71, 0

Conread position: 644-846
Cow position: chr10:38537746-38537546 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr10:125143-125345 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 65, 0

Conread position: 644-847
Cow position: chr10:14335098-14334896 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 652-794
Cow position: chr10:31524844-31524980 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 119
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 653-847
Cow position: chr10:29845888-29845695 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 154
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 60, 0

Conread position: 658-763
Cow position: chr10:46183732-46183627 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 101, 55

Conread position: 660-847
Cow position: chr10:39040538-39040355 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 146
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 55, 0

Conread position: 1-108
Cow position: chr11:30124406-30124298 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 1-108
Cow position: chr11:30125231-30125124 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-268
Cow position: chr11:11677366-11677625 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 104, 11

Conread position: 1-295
Cow position: chr11:4270847-4270553 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 236

Conread position: 1-302
Cow position: chr11:8245322-8245624 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 237

Conread position: 1-307
Cow position: chr11:61769331-61769023 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 195
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 48

Conread position: 1-346
Cow position: chr11:28063855-28064182 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 135

Conread position: 1-351
Cow position: chr11:23877317-23877670 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr11:4027549-4027169 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 105

Conread position: 1-381
Cow position: chr11:10847456-10847841 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 340

Conread position: 1-381
Cow position: chr11:11988121-11988502 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr11:12358410-12358026 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 238

Conread position: 1-381
Cow position: chr11:19102472-19102105 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 238

Conread position: 1-381
Cow position: chr11:26124917-26124536 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 184

Conread position: 1-381
Cow position: chr11:36323422-36323807 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 251
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 121

Conread position: 1-381
Cow position: chr11:38835417-38835044 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-381
Cow position: chr11:44157239-44156855 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-381
Cow position: chr11:44251812-44252190 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 42

Conread position: 1-381
Cow position: chr11:53432052-53431668 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-381
Cow position: chr11:58134401-58134784 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr11:76374190-76373825 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 51

Conread position: 1-386
Cow position: chr11:9157140-9156760 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 30

Conread position: 1-386
Cow position: chr11:12093573-12093962 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 30

Conread position: 1-386
Cow position: chr11:31874762-31874383 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 138

Conread position: 1-386
Cow position: chr11:43514622-43514237 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 181

Conread position: 1-386
Cow position: chr11:66727386-66727769 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 181

Conread position: 2-227
Cow position: chr11:20510139-20510363 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 176
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 103, 59

Conread position: 2-357
Cow position: chr11:28049187-28048841 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 65

Conread position: 2-381
Cow position: chr11:15898932-15898556 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 158

Conread position: 2-381
Cow position: chr11:85393796-85393414 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 110

Conread position: 3-370
Cow position: chr11:30187874-30188227 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 245
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 102, 115

Conread position: 3-381
Cow position: chr11:41170677-41170305 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 240

Conread position: 4-323
Cow position: chr11:13066669-13066328 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 234
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 33, 259

Conread position: 4-381
Cow position: chr11:29233245-29232842 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 286
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 93, 126

Conread position: 5-215
Cow position: chr11:33978201-33977980 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 5-381
Cow position: chr11:24393337-24393710 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 234

Conread position: 5-384
Cow position: chr11:84389645-84390030 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 13

Conread position: 5-386
Cow position: chr11:10090694-10091075 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 156

Conread position: 6-210
Cow position: chr11:38505593-38505391 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 99, 74

Conread position: 6-278
Cow position: chr11:4041076-4040808 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 67

Conread position: 6-333
Cow position: chr11:28108162-28108493 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-361
Cow position: chr11:5343205-5342847 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 57

Conread position: 6-381
Cow position: chr11:7116231-7116615 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 72

Conread position: 6-384
Cow position: chr11:31926190-31926566 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 67

Conread position: 6-384
Cow position: chr11:52419400-52419784 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 241

Conread position: 6-385
Cow position: chr11:3493023-3493389 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 57

Conread position: 6-386
Cow position: chr11:1496067-1495693 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 96

Conread position: 6-386
Cow position: chr11:9606562-9606184 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 20

Conread position: 6-386
Cow position: chr11:9734651-9734277 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 234

Conread position: 6-386
Cow position: chr11:15983636-15984021 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 237

Conread position: 6-386
Cow position: chr11:17107674-17107291 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 152

Conread position: 6-386
Cow position: chr11:19064237-19063854 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 231

Conread position: 6-386
Cow position: chr11:28229745-28229360 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 231

Conread position: 6-386
Cow position: chr11:33194541-33194163 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 124

Conread position: 6-386
Cow position: chr11:36744168-36743785 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 38

Conread position: 6-386
Cow position: chr11:57628034-57627642 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 55

Conread position: 6-386
Cow position: chr11:61401039-61400664 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 201

Conread position: 6-386
Cow position: chr11:64046010-64046394 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr11:67450510-67450888 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr11:67846559-67846173 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr11:73477320-73477704 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 231

Conread position: 7-383
Cow position: chr11:46246542-46246156 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 12

Conread position: 10-302
Cow position: chr11:10868514-10868794 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 91, 46

Conread position: 12-353
Cow position: chr11:52886023-52885706 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 245
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 93, 71

Conread position: 12-386
Cow position: chr11:62229214-62229583 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 64

Conread position: 12-387
Cow position: chr11:20734224-20733845 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 231

Conread position: 13-256
Cow position: chr11:47760671-47760427 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 85

Conread position: 13-381
Cow position: chr11:29668587-29668218 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 15

Conread position: 14-386
Cow position: chr11:64082062-64081687 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 7

Conread position: 21-386
Cow position: chr11:45111650-45112012 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 224

Conread position: 26-386
Cow position: chr11:40775962-40775605 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 112

Conread position: 35-339
Cow position: chr11:16986279-16985977 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 217
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 72, 38

Conread position: 35-386
Cow position: chr11:63655296-63654941 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 208

Conread position: 38-376
Cow position: chr11:36762807-36763136 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 234
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 67, 151

Conread position: 39-361
Cow position: chr11:42432197-42432520 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 60

Conread position: 40-305
Cow position: chr11:1851564-1851831 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 173
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 49-407
Cow position: chr11:67153704-67154058 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 50

Conread position: 56-343
Cow position: chr11:22934860-22935148 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 84

Conread position: 57-381
Cow position: chr11:71329658-71329983 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 181

Conread position: 62-227
Cow position: chr11:26625878-26625716 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 65-381
Cow position: chr11:27059042-27058721 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 220
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 14, 98

Conread position: 80-365
Cow position: chr11:10217235-10216960 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 37, 122

Conread position: 80-386
Cow position: chr11:53287079-53286769 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 162

Conread position: 83-381
Cow position: chr11:28054520-28054218 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 162

Conread position: 84-323
Cow position: chr11:52766696-52766936 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 156
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 11, 161

Conread position: 100-381
Cow position: chr11:39802972-39803251 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 218, 52

Conread position: 101-275
Cow position: chr11:4057125-4057299 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 108, 136

Conread position: 107-386
Cow position: chr11:10051837-10052118 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 124

Conread position: 111-385
Cow position: chr11:44492152-44491880 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 77

Conread position: 121-386
Cow position: chr11:17546295-17546563 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 116

Conread position: 128-381
Cow position: chr11:9271040-9271288 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 191, 32

Conread position: 128-381
Cow position: chr11:41084757-41084507 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 182, 60

Conread position: 129-381
Cow position: chr11:9216934-9216687 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 9, 81

Conread position: 156-385
Cow position: chr11:30124311-30124084 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 58, 22

Conread position: 188-392
Cow position: chr11:78186683-78186479 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 54

Conread position: 193-387
Cow position: chr11:37476798-37476601 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 21, 49

Conread position: 246-386
Cow position: chr11:32480923-32480782 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 119
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 74, 26

Conread position: 256-384
Cow position: chr11:71982261-71982130 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 83

Conread position: 635-847
Cow position: chr11:11988490-11988702 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 81

Conread position: 640-847
Cow position: chr11:44252184-44252387 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 161
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 75, 0

Conread position: 644-796
Cow position: chr11:44491886-44491735 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 73, 0

Conread position: 644-847
Cow position: chr11:19102107-19101905 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr11:23877684-23877885 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 69, 0

Conread position: 644-847
Cow position: chr11:26124538-26124336 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 161
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr11:41170307-41170105 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 69, 0

Conread position: 644-847
Cow position: chr11:44156857-44156657 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 13, 0

Conread position: 644-847
Cow position: chr11:53431670-53431468 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 69, 0

Conread position: 644-847
Cow position: chr11:71982135-71981937 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 73, 0

Conread position: 1-374
Cow position: chr12:1869592-1869969 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 162

Conread position: 1-377
Cow position: chr12:11098543-11098911 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 78

Conread position: 1-377
Cow position: chr12:27855659-27855289 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 22

Conread position: 1-381
Cow position: chr12:1402791-1403172 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 238

Conread position: 1-381
Cow position: chr12:3631567-3631185 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 181

Conread position: 1-381
Cow position: chr12:6406350-6405966 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr12:21198261-21198640 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 52

Conread position: 1-381
Cow position: chr12:22205447-22205063 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr12:27932644-27932249 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 148

Conread position: 1-386
Cow position: chr12:28765722-28765335 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-396
Cow position: chr12:42859528-42859128 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 228

Conread position: 2-386
Cow position: chr12:14662331-14661947 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 241

Conread position: 5-381
Cow position: chr12:25100757-25100378 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 6-249
Cow position: chr12:33986461-33986705 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 231

Conread position: 6-259
Cow position: chr12:21254358-21254111 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 99, 110

Conread position: 6-263
Cow position: chr12:16821774-16822032 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-268
Cow position: chr12:21426993-21427254 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 27

Conread position: 6-371
Cow position: chr12:37558855-37559217 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 33

Conread position: 6-386
Cow position: chr12:3361203-3361609 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 260

Conread position: 6-386
Cow position: chr12:4157676-4158060 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr12:8197515-8197899 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 231

Conread position: 6-386
Cow position: chr12:32653843-32654226 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 229

Conread position: 7-357
Cow position: chr12:2282863-2283217 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 233

Conread position: 7-381
Cow position: chr12:10485359-10485733 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 264
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 83, 9

Conread position: 7-386
Cow position: chr12:43031085-43030704 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 60

Conread position: 16-381
Cow position: chr12:21226654-21226290 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 242
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 109, 47

Conread position: 22-381
Cow position: chr12:8677767-8677422 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 124

Conread position: 23-381
Cow position: chr12:601041-600678 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 223

Conread position: 58-331
Cow position: chr12:12292266-12292542 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 187
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 26

Conread position: 68-177
Cow position: chr12:36482802-36482912 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 95
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 68-381
Cow position: chr12:36367197-36367514 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 170

Conread position: 68-381
Cow position: chr12:36427600-36427911 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 169

Conread position: 68-381
Cow position: chr12:36448942-36449256 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 229

Conread position: 68-384
Cow position: chr12:36479538-36479857 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 169

Conread position: 74-386
Cow position: chr12:20997721-20997413 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 221
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 140, 10

Conread position: 102-344
Cow position: chr12:21942133-21942377 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 13, 136

Conread position: 128-386
Cow position: chr12:21209090-21209336 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 195
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 86, 32

Conread position: 137-386
Cow position: chr12:35314220-35313973 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 105

Conread position: 146-387
Cow position: chr12:25263027-25262783 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 96

Conread position: 148-386
Cow position: chr12:1889069-1888831 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 187
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 68, 90

Conread position: 238-386
Cow position: chr12:21428391-21428542 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 80, 100

Conread position: 650-847
Cow position: chr12:28765336-28765140 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 651-831
Cow position: chr12:27932222-27932044 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 58, 0

Conread position: 660-845
Cow position: chr12:27855273-27855089 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-108
Cow position: chr13:34766793-34766685 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 104, 0

Conread position: 1-212
Cow position: chr13:22766104-22766316 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 98, 171

Conread position: 1-247
Cow position: chr13:11064088-11063851 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 189
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 98, 72

Conread position: 1-249
Cow position: chr13:60700767-60700532 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 210, 106

Conread position: 1-342
Cow position: chr13:30238325-30238668 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 156

Conread position: 1-349
Cow position: chr13:4941168-4941512 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 34

Conread position: 1-356
Cow position: chr13:33336339-33335993 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 34

Conread position: 1-377
Cow position: chr13:1593077-1592697 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 241

Conread position: 1-377
Cow position: chr13:34042289-34041914 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-381
Cow position: chr13:15924304-15923920 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr13:27922150-27921776 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 152

Conread position: 1-381
Cow position: chr13:35757322-35757705 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 11

Conread position: 1-386
Cow position: chr13:23003229-23002841 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-386
Cow position: chr13:34937570-34937945 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 32

Conread position: 1-398
Cow position: chr13:9044580-9044981 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 2-125
Cow position: chr13:48357645-48357767 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 103, 77

Conread position: 2-235
Cow position: chr13:29202279-29202042 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 74, 164

Conread position: 2-258
Cow position: chr13:26844174-26844424 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 24

Conread position: 2-344
Cow position: chr13:19413305-19413628 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 239
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 103, 68

Conread position: 2-354
Cow position: chr13:2582580-2582233 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 240
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 17, 87

Conread position: 2-381
Cow position: chr13:30303357-30303742 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 238

Conread position: 2-381
Cow position: chr13:30656899-30656524 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 71

Conread position: 4-381
Cow position: chr13:31556633-31556268 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 265
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 220, 90

Conread position: 4-381
Cow position: chr13:43982999-43982625 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 163

Conread position: 4-386
Cow position: chr13:34048707-34049090 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 31

Conread position: 5-381
Cow position: chr13:3654241-3653861 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 242

Conread position: 5-381
Cow position: chr13:4483877-4484258 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 234

Conread position: 5-381
Cow position: chr13:6668036-6667659 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 5-381
Cow position: chr13:32737741-32737365 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 74

Conread position: 6-202
Cow position: chr13:2296735-2296542 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 99, 55

Conread position: 6-323
Cow position: chr13:3058032-3057714 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 142

Conread position: 6-381
Cow position: chr13:49973763-49974141 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 29

Conread position: 6-384
Cow position: chr13:50109539-50109913 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 231

Conread position: 6-386
Cow position: chr13:2388740-2388351 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 244

Conread position: 6-386
Cow position: chr13:13324827-13325202 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr13:17308553-17308936 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 74

Conread position: 6-386
Cow position: chr13:21840119-21839736 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 21

Conread position: 6-386
Cow position: chr13:30244600-30244217 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr13:31734007-31733623 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr13:32985268-32984887 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr13:34868827-34869209 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 166

Conread position: 6-386
Cow position: chr13:35030626-35031002 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 104

Conread position: 6-386
Cow position: chr13:47229923-47229539 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr13:60466415-60466792 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 55

Conread position: 7-210
Cow position: chr13:34029167-34029369 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 98, 83

Conread position: 7-381
Cow position: chr13:34325478-34325100 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 238

Conread position: 7-386
Cow position: chr13:20541953-20541574 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 239

Conread position: 12-381
Cow position: chr13:15520407-15520048 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 14

Conread position: 21-376
Cow position: chr13:57023802-57024157 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 235
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 84, 12

Conread position: 21-386
Cow position: chr13:41315952-41316321 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 216

Conread position: 22-265
Cow position: chr13:34911063-34910821 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 39

Conread position: 27-386
Cow position: chr13:58118808-58118446 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 17

Conread position: 29-338
Cow position: chr13:36959443-36959139 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 201
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 25

Conread position: 29-381
Cow position: chr13:31612201-31611843 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 215

Conread position: 29-381
Cow position: chr13:32545484-32545840 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 209

Conread position: 35-387
Cow position: chr13:676970-677338 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 215

Conread position: 44-375
Cow position: chr13:15450990-15450660 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 133

Conread position: 55-381
Cow position: chr13:13899999-13900328 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 181

Conread position: 66-265
Cow position: chr13:11799579-11799381 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 125, 22

Conread position: 99-323
Cow position: chr13:5625901-5625681 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 115, 69

Conread position: 114-376
Cow position: chr13:34766651-34766405 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 133, 21

Conread position: 120-336
Cow position: chr13:18331607-18331825 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 172
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 83, 116

Conread position: 149-386
Cow position: chr13:12063727-12063487 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 93

Conread position: 166-381
Cow position: chr13:11063775-11063572 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 200, 42

Conread position: 208-386
Cow position: chr13:16255093-16254916 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 66, 29

Conread position: 644-790
Cow position: chr13:35757703-35757848 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr13:3653863-3653661 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr13:15520050-15519848 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr13:30303740-30303942 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr13:31611845-31611648 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 49, 0

Conread position: 645-847
Cow position: chr13:1592694-1592496 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 70, 0

Conread position: 659-840
Cow position: chr13:41696336-41696515 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 1-102
Cow position: chr14:15276624-15276523 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-187
Cow position: chr14:16919734-16919549 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 146
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 104, 167

Conread position: 1-215
Cow position: chr14:14308600-14308387 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 1-215
Cow position: chr14:33342087-33342303 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 1-222
Cow position: chr14:45834104-45834323 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 171
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 104, 19

Conread position: 1-229
Cow position: chr14:35423582-35423804 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 104, 29

Conread position: 1-235
Cow position: chr14:46465033-46465281 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 144, 171

Conread position: 1-236
Cow position: chr14:17760944-17760709 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 197

Conread position: 1-257
Cow position: chr14:46474794-46475037 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 104, 56

Conread position: 1-343
Cow position: chr14:33236995-33237337 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 137

Conread position: 1-352
Cow position: chr14:45712035-45711682 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 43

Conread position: 1-357
Cow position: chr14:47655112-47655449 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 105, 26

Conread position: 1-359
Cow position: chr14:37223857-37224216 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 131

Conread position: 1-361
Cow position: chr14:44581321-44581670 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 249
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 49, 94

Conread position: 1-379
Cow position: chr14:48970635-48971010 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 57

Conread position: 1-380
Cow position: chr14:11154210-11153830 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 237

Conread position: 1-380
Cow position: chr14:45161053-45161430 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr14:7472324-7472698 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 28

Conread position: 1-381
Cow position: chr14:12743116-12742734 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-381
Cow position: chr14:13302977-13303361 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 238

Conread position: 1-381
Cow position: chr14:16273340-16272963 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 92

Conread position: 1-381
Cow position: chr14:17001106-17000726 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 167

Conread position: 1-381
Cow position: chr14:17685352-17685732 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 241

Conread position: 1-381
Cow position: chr14:20782412-20782795 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr14:44257024-44256631 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 190

Conread position: 1-381
Cow position: chr14:44377764-44378136 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 83

Conread position: 1-381
Cow position: chr14:48254349-48253966 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 244

Conread position: 1-381
Cow position: chr14:50110522-50110907 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 238

Conread position: 1-383
Cow position: chr14:22031466-22031075 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 344

Conread position: 1-385
Cow position: chr14:45302995-45302635 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 20

Conread position: 1-386
Cow position: chr14:45081001-45081388 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 66

Conread position: 1-390
Cow position: chr14:44776094-44775694 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 15

Conread position: 2-158
Cow position: chr14:28993897-28993740 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 130
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 103, 0

Conread position: 2-354
Cow position: chr14:46519056-46519388 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 212, 58

Conread position: 2-357
Cow position: chr14:41408842-41409190 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 219

Conread position: 2-365
Cow position: chr14:34043705-34043331 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 256
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 26, 47

Conread position: 2-381
Cow position: chr14:44287294-44286915 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 241

Conread position: 2-386
Cow position: chr14:23257309-23257697 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 236

Conread position: 2-386
Cow position: chr14:44686000-44686385 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 240

Conread position: 2-387
Cow position: chr14:44226352-44226741 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 235

Conread position: 2-387
Cow position: chr14:44551835-44552232 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 255

Conread position: 2-391
Cow position: chr14:38146954-38147368 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 293
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 60, 42

Conread position: 4-357
Cow position: chr14:46513499-46513844 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 243
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 207, 25

Conread position: 4-376
Cow position: chr14:30706327-30705957 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 261
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 120, 93

Conread position: 5-226
Cow position: chr14:37413482-37413260 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 21, 73

Conread position: 5-226
Cow position: chr14:37457445-37457226 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 173
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 100, 26

Conread position: 5-377
Cow position: chr14:13778914-13779288 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 135

Conread position: 5-380
Cow position: chr14:5511782-5512158 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 233

Conread position: 5-381
Cow position: chr14:5529022-5529401 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 238

Conread position: 6-246
Cow position: chr14:29047949-29047708 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-259
Cow position: chr14:35386852-35386600 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 158

Conread position: 6-342
Cow position: chr14:35366477-35366145 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 234
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 202, 33

Conread position: 6-358
Cow position: chr14:45029170-45028826 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 233

Conread position: 6-376
Cow position: chr14:33393825-33393454 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 64

Conread position: 6-381
Cow position: chr14:9045520-9045900 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 233

Conread position: 6-384
Cow position: chr14:30596423-30596043 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 176

Conread position: 6-386
Cow position: chr14:2284293-2284676 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 119

Conread position: 6-386
Cow position: chr14:13864121-13863752 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 67

Conread position: 6-386
Cow position: chr14:17491502-17491121 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 107

Conread position: 6-386
Cow position: chr14:30584998-30584618 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 55

Conread position: 6-386
Cow position: chr14:45672091-45671709 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 143

Conread position: 6-387
Cow position: chr14:750524-750921 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 245

Conread position: 7-381
Cow position: chr14:19328308-19327935 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 236

Conread position: 8-384
Cow position: chr14:12610419-12610786 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 65

Conread position: 12-386
Cow position: chr14:30735299-30734929 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 76

Conread position: 13-333
Cow position: chr14:40773943-40774274 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 218
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 16, 21

Conread position: 13-386
Cow position: chr14:29777536-29777161 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 229

Conread position: 14-386
Cow position: chr14:43557940-43558316 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 65

Conread position: 16-365
Cow position: chr14:48825264-48825607 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 222

Conread position: 17-228
Cow position: chr14:45917613-45917827 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 89, 0

Conread position: 21-386
Cow position: chr14:38531763-38531401 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 217

Conread position: 22-361
Cow position: chr14:9101743-9101404 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 246
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 81, 22

Conread position: 22-381
Cow position: chr14:13621162-13620816 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 80

Conread position: 22-386
Cow position: chr14:50138569-50138930 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 51

Conread position: 23-358
Cow position: chr14:40340744-40341078 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 143

Conread position: 25-332
Cow position: chr14:33765078-33765381 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 202
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 184, 88

Conread position: 26-386
Cow position: chr14:45206291-45206661 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 156

Conread position: 44-357
Cow position: chr14:40738511-40738818 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 39

Conread position: 80-381
Cow position: chr14:13273479-13273778 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 158

Conread position: 93-377
Cow position: chr14:32446841-32447125 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 142

Conread position: 95-381
Cow position: chr14:34776299-34776578 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 117, 78

Conread position: 104-365
Cow position: chr14:15276173-15275912 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 59

Conread position: 137-381
Cow position: chr14:33676870-33677120 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 187
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 72, 100

Conread position: 138-381
Cow position: chr14:33401780-33402024 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 99

Conread position: 149-386
Cow position: chr14:4862939-4862699 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 93

Conread position: 149-386
Cow position: chr14:23901387-23901627 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 87

Conread position: 150-386
Cow position: chr14:27977458-27977697 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 92

Conread position: 151-350
Cow position: chr14:43554534-43554729 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 61, 75

Conread position: 163-357
Cow position: chr14:29580064-29580258 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 74, 64

Conread position: 165-381
Cow position: chr14:190081-190300 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 174
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 49, 77

Conread position: 183-386
Cow position: chr14:35917471-35917265 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 166
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 31, 55

Conread position: 190-381
Cow position: chr14:12899244-12899435 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 156
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 24, 52

Conread position: 198-386
Cow position: chr14:46392373-46392185 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 16, 44

Conread position: 200-381
Cow position: chr14:16919559-16919381 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 120, 41

Conread position: 209-386
Cow position: chr14:16343989-16343811 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 144
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 109, 32

Conread position: 231-381
Cow position: chr14:44288967-44288819 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 34, 10

Conread position: 237-386
Cow position: chr14:29047499-29047347 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 81, 101

Conread position: 243-386
Cow position: chr14:35385876-35385730 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 75, 96

Conread position: 634-847
Cow position: chr14:19327948-19327736 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 11, 82

Conread position: 639-847
Cow position: chr14:16272971-16272763 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 164
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 6, 75

Conread position: 640-809
Cow position: chr14:13863763-13863595 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 30

Conread position: 644-841
Cow position: chr14:7472696-7472884 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 48, 0

Conread position: 644-846
Cow position: chr14:15275897-15275697 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr14:16919383-16919184 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 71, 0

Conread position: 645-846
Cow position: chr14:32447128-32447328 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 70, 0

Conread position: 650-841
Cow position: chr14:11153825-11153630 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 123, 65

Conread position: 650-847
Cow position: chr14:46465661-46465854 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 1-127
Cow position: chr15:4682188-4682314 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 103, 31

Conread position: 1-169
Cow position: chr15:36642890-36643059 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 25, 84

Conread position: 1-206
Cow position: chr15:41366128-41366330 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 104, 56

Conread position: 1-235
Cow position: chr15:9739685-9739458 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 124

Conread position: 1-256
Cow position: chr15:9912593-9912844 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 1-259
Cow position: chr15:51216545-51216801 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 199

Conread position: 1-341
Cow position: chr15:21449656-21449980 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 1-349
Cow position: chr15:4385224-4385568 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 171

Conread position: 1-350
Cow position: chr15:35753640-35753284 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-360
Cow position: chr15:32673591-32673238 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 43

Conread position: 1-361
Cow position: chr15:2007899-2008248 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 239
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 107, 59

Conread position: 1-365
Cow position: chr15:12421209-12420843 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 73

Conread position: 1-377
Cow position: chr15:21665789-21665414 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-377
Cow position: chr15:32494430-32494053 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-378
Cow position: chr15:1764047-1764423 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 72

Conread position: 1-381
Cow position: chr15:315903-315520 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 177

Conread position: 1-381
Cow position: chr15:524904-524522 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-381
Cow position: chr15:2076605-2076985 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 236

Conread position: 1-381
Cow position: chr15:2413615-2413232 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 172

Conread position: 1-381
Cow position: chr15:6155996-6155608 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 246

Conread position: 1-381
Cow position: chr15:6623051-6623422 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 78

Conread position: 1-381
Cow position: chr15:7837201-7837584 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr15:7966009-7965621 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 266
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 96, 158

Conread position: 1-381
Cow position: chr15:8099445-8099812 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 103

Conread position: 1-381
Cow position: chr15:8750383-8750750 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 86

Conread position: 1-381
Cow position: chr15:15347162-15346779 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 241

Conread position: 1-381
Cow position: chr15:18332871-18332491 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 241

Conread position: 1-381
Cow position: chr15:18576671-18577051 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 120

Conread position: 1-381
Cow position: chr15:19738096-19737715 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr15:19817930-19818301 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 48

Conread position: 1-381
Cow position: chr15:35735535-35735914 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 46

Conread position: 1-381
Cow position: chr15:40105828-40106199 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 93

Conread position: 1-381
Cow position: chr15:42936671-42937049 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 78

Conread position: 1-381
Cow position: chr15:44069881-44070264 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 32

Conread position: 1-381
Cow position: chr15:44828751-44829135 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 241

Conread position: 1-384
Cow position: chr15:36626338-36625931 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 251

Conread position: 1-385
Cow position: chr15:37392449-37392834 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 12

Conread position: 1-386
Cow position: chr15:4961603-4961978 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 78

Conread position: 1-386
Cow position: chr15:7934287-7934670 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 34

Conread position: 2-246
Cow position: chr15:42320469-42320225 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 147

Conread position: 2-349
Cow position: chr15:17292396-17292752 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 185

Conread position: 2-356
Cow position: chr15:3842472-3842123 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 241

Conread position: 2-376
Cow position: chr15:4922108-4922483 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 236

Conread position: 2-378
Cow position: chr15:369202-368840 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 8

Conread position: 2-381
Cow position: chr15:7549362-7549734 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 10

Conread position: 2-381
Cow position: chr15:16507955-16508327 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 92

Conread position: 2-381
Cow position: chr15:31358844-31359222 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 240

Conread position: 2-386
Cow position: chr15:56438-56821 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 178

Conread position: 2-386
Cow position: chr15:21950161-21949788 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 265
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 13, 55

Conread position: 3-263
Cow position: chr15:7787747-7787488 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 101, 24

Conread position: 5-235
Cow position: chr15:17218443-17218212 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 106, 82

Conread position: 5-257
Cow position: chr15:3253845-3253596 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 30

Conread position: 5-303
Cow position: chr15:4765166-4765465 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 239

Conread position: 5-338
Cow position: chr15:498716-499045 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 225
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 46, 42

Conread position: 5-338
Cow position: chr15:32507682-32507338 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 232
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 72, 39

Conread position: 5-380
Cow position: chr15:7894272-7893898 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 94

Conread position: 5-381
Cow position: chr15:1237649-1238017 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 16

Conread position: 5-381
Cow position: chr15:4671391-4671770 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 235

Conread position: 5-381
Cow position: chr15:9429903-9430276 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 7

Conread position: 5-381
Cow position: chr15:24295055-24295435 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 233

Conread position: 5-381
Cow position: chr15:51714918-51715298 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 234

Conread position: 6-196
Cow position: chr15:2012036-2012227 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 99, 0

Conread position: 6-212
Cow position: chr15:7234262-7234466 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 159
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 99, 16

Conread position: 6-217
Cow position: chr15:29009795-29010008 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 6-222
Cow position: chr15:36077203-36077421 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 169
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 99, 0

Conread position: 6-247
Cow position: chr15:6592982-6592752 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 99, 111

Conread position: 6-310
Cow position: chr15:7260590-7260886 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 171

Conread position: 6-386
Cow position: chr15:328389-328760 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 265
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 103, 234

Conread position: 6-386
Cow position: chr15:444563-444945 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 184

Conread position: 6-386
Cow position: chr15:1519194-1518813 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 238

Conread position: 6-386
Cow position: chr15:1772454-1772838 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr15:1834506-1834130 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 136

Conread position: 6-386
Cow position: chr15:1882550-1882166 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr15:2647700-2647314 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 233

Conread position: 6-386
Cow position: chr15:4142862-4142478 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr15:4196418-4196802 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr15:6471962-6471579 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 71

Conread position: 6-386
Cow position: chr15:7544843-7545219 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 131

Conread position: 6-386
Cow position: chr15:17080246-17079865 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 230

Conread position: 6-386
Cow position: chr15:36970880-36971257 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 110

Conread position: 6-386
Cow position: chr15:50123986-50123602 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr15:50147034-50147407 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 139

Conread position: 6-387
Cow position: chr15:28490185-28489807 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 73

Conread position: 7-386
Cow position: chr15:3888835-3889219 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 20

Conread position: 7-386
Cow position: chr15:18268030-18267647 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 230

Conread position: 8-381
Cow position: chr15:3009893-3009517 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 234

Conread position: 12-386
Cow position: chr15:6078725-6079092 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 55

Conread position: 12-386
Cow position: chr15:35647699-35647327 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 225

Conread position: 13-381
Cow position: chr15:2762653-2763011 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 247
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 108, 25

Conread position: 15-358
Cow position: chr15:5980327-5980676 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 225

Conread position: 20-323
Cow position: chr15:30810973-30811266 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 208
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 185, 170

Conread position: 22-381
Cow position: chr15:10888593-10888953 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 56

Conread position: 23-381
Cow position: chr15:3261355-3260983 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 215

Conread position: 23-381
Cow position: chr15:14582372-14582023 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 38

Conread position: 27-383
Cow position: chr15:7984038-7983684 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 43

Conread position: 27-386
Cow position: chr15:4812585-4812940 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 152

Conread position: 28-258
Cow position: chr15:14634402-14634640 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 69, 24

Conread position: 30-381
Cow position: chr15:6553834-6553486 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 23

Conread position: 35-269
Cow position: chr15:686924-687154 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 12, 70

Conread position: 41-386
Cow position: chr15:32720746-32720401 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 200

Conread position: 45-318
Cow position: chr15:24794350-24794624 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 204
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 56, 124

Conread position: 48-195
Cow position: chr15:53339022-53339168 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 57, 31

Conread position: 54-381
Cow position: chr15:4651373-4651700 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 75

Conread position: 65-386
Cow position: chr15:2920974-2920659 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 222
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 49, 7

Conread position: 66-386
Cow position: chr15:32711118-32711433 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 166

Conread position: 74-386
Cow position: chr15:789548-789232 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 169

Conread position: 80-344
Cow position: chr15:690807-691070 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 25, 102

Conread position: 80-374
Cow position: chr15:25107503-25107199 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 214
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 118, 73

Conread position: 81-381
Cow position: chr15:38980701-38981005 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 161

Conread position: 82-386
Cow position: chr15:32693611-32693910 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 122

Conread position: 88-381
Cow position: chr15:8057338-8057633 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 120, 43

Conread position: 88-381
Cow position: chr15:53137178-53136885 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 46

Conread position: 97-265
Cow position: chr15:32480830-32480663 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 140

Conread position: 101-365
Cow position: chr15:7054989-7055243 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 144, 51

Conread position: 120-380
Cow position: chr15:32203735-32203986 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 196
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 89, 8

Conread position: 126-354
Cow position: chr15:4678383-4678612 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 83, 111

Conread position: 128-380
Cow position: chr15:24717175-24717424 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 194
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 86, 42

Conread position: 131-384
Cow position: chr15:4685683-4685937 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 78, 106

Conread position: 148-386
Cow position: chr15:1782322-1782563 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 95

Conread position: 176-386
Cow position: chr15:31862426-31862222 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 166
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 66

Conread position: 178-346
Cow position: chr15:1667840-1668010 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 64

Conread position: 223-386
Cow position: chr15:21466045-21466211 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 95, 115

Conread position: 224-386
Cow position: chr15:2012229-2012392 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 94, 20

Conread position: 224-386
Cow position: chr15:11597831-11597667 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 94, 17

Conread position: 240-381
Cow position: chr15:8811827-8811683 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 80, 99

Conread position: 258-386
Cow position: chr15:20749599-20749730 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 78

Conread position: 640-847
Cow position: chr15:1238011-1238214 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 159
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 62, 0

Conread position: 640-847
Cow position: chr15:4922480-4922683 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 73, 0

Conread position: 640-847
Cow position: chr15:31862233-31862027 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 640-847
Cow position: chr15:35752986-35752783 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 163
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 155, 53

Conread position: 644-830
Cow position: chr15:36971250-36971435 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 146
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 71, 0

Conread position: 644-846
Cow position: chr15:315522-315322 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr15:2076983-2077193 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 99, 71

Conread position: 644-847
Cow position: chr15:6155610-6155408 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 13, 18

Conread position: 644-847
Cow position: chr15:19737717-19737514 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 645-847
Cow position: chr15:32494050-32493852 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 70, 0

Conread position: 650-758
Cow position: chr15:789233-789126 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 653-846
Cow position: chr15:31359225-31359414 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 151
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 62, 0

Conread position: 660-847
Cow position: chr15:20356567-20356386 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-271
Cow position: chr16:25156266-25155997 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 101, 70

Conread position: 1-272
Cow position: chr16:47564021-47564283 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 183, 26

Conread position: 1-338
Cow position: chr16:5483929-5484268 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-353
Cow position: chr16:49235221-49234867 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 30

Conread position: 1-359
Cow position: chr16:15184413-15184761 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 109

Conread position: 1-377
Cow position: chr16:8816496-8816116 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-377
Cow position: chr16:15566351-15566730 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 30

Conread position: 1-380
Cow position: chr16:10203824-10203447 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 40

Conread position: 1-381
Cow position: chr16:407422-407041 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-381
Cow position: chr16:1567844-1567460 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr16:2411358-2410974 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr16:2727678-2727295 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-381
Cow position: chr16:10437851-10438229 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 205

Conread position: 1-381
Cow position: chr16:12538316-12537932 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-381
Cow position: chr16:23982920-23983302 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 163

Conread position: 1-381
Cow position: chr16:26663359-26663742 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 239

Conread position: 1-381
Cow position: chr16:27734182-27733799 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 216

Conread position: 1-381
Cow position: chr16:28471492-28471109 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 66

Conread position: 1-381
Cow position: chr16:29046632-29047015 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 160

Conread position: 1-381
Cow position: chr16:40296568-40296184 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 236

Conread position: 1-386
Cow position: chr16:25085251-25085617 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 144

Conread position: 1-386
Cow position: chr16:25170963-25171346 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 8

Conread position: 1-386
Cow position: chr16:29033658-29034048 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 20

Conread position: 1-387
Cow position: chr16:25257546-25257935 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 174

Conread position: 2-178
Cow position: chr16:18687518-18687341 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 102, 0

Conread position: 2-353
Cow position: chr16:16271986-16271648 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 143

Conread position: 2-381
Cow position: chr16:23808031-23808417 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 46

Conread position: 2-381
Cow position: chr16:25441235-25441619 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 238

Conread position: 2-381
Cow position: chr16:25457854-25457471 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 241

Conread position: 3-386
Cow position: chr16:28437782-28437388 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 271
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 38, 116

Conread position: 5-361
Cow position: chr16:9930548-9930906 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 234

Conread position: 5-377
Cow position: chr16:25341579-25341945 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 173

Conread position: 5-377
Cow position: chr16:43897657-43897284 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 156

Conread position: 5-381
Cow position: chr16:2483526-2483147 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 52

Conread position: 5-408
Cow position: chr16:23252892-23252487 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 141

Conread position: 6-323
Cow position: chr16:31832240-31832558 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 142

Conread position: 6-323
Cow position: chr16:47473185-47473507 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 223
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 101, 169

Conread position: 6-346
Cow position: chr16:2239125-2238793 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 107

Conread position: 6-347
Cow position: chr16:25188244-25188582 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 229

Conread position: 6-349
Cow position: chr16:53045962-53046308 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 231

Conread position: 6-386
Cow position: chr16:32346-32730 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 233

Conread position: 6-386
Cow position: chr16:5661458-5661841 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 231

Conread position: 6-386
Cow position: chr16:10375970-10375601 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 157

Conread position: 6-386
Cow position: chr16:28170756-28170374 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 60

Conread position: 6-386
Cow position: chr16:34529936-34530310 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 232

Conread position: 6-386
Cow position: chr16:41163451-41163074 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 230

Conread position: 7-386
Cow position: chr16:4302722-4302343 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 75

Conread position: 8-313
Cow position: chr16:18498701-18498401 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 19

Conread position: 12-386
Cow position: chr16:24105325-24105700 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 67

Conread position: 14-357
Cow position: chr16:42739474-42739144 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 58

Conread position: 18-376
Cow position: chr16:31592287-31591927 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 225

Conread position: 20-349
Cow position: chr16:25892347-25892673 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 53

Conread position: 22-381
Cow position: chr16:14666182-14665820 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 221

Conread position: 22-386
Cow position: chr16:836676-837040 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 217

Conread position: 23-346
Cow position: chr16:26516785-26516457 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 225
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 84, 125

Conread position: 31-229
Cow position: chr16:36232100-36231904 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 74, 136

Conread position: 32-375
Cow position: chr16:26650875-26651215 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 153

Conread position: 37-323
Cow position: chr16:36159378-36159666 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 199
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 62, 126

Conread position: 41-396
Cow position: chr16:15492878-15493235 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 198

Conread position: 66-386
Cow position: chr16:4479309-4478985 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 177

Conread position: 80-381
Cow position: chr16:15476531-15476834 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 158

Conread position: 80-386
Cow position: chr16:28197991-28197680 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 159

Conread position: 94-283
Cow position: chr16:15237447-15237635 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 11, 54

Conread position: 95-386
Cow position: chr16:49256488-49256209 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 217
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 113, 32

Conread position: 100-333
Cow position: chr16:6943312-6943548 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 137

Conread position: 100-347
Cow position: chr16:12670172-12669931 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 215, 108

Conread position: 105-381
Cow position: chr16:30049211-30049477 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 210
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 212, 22

Conread position: 111-380
Cow position: chr16:1431906-1432182 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 134

Conread position: 127-381
Cow position: chr16:37456289-37456034 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 44

Conread position: 128-357
Cow position: chr16:17057509-17057286 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 196, 90

Conread position: 129-318
Cow position: chr16:41755974-41755788 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 113

Conread position: 145-342
Cow position: chr16:43852364-43852169 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 154
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 69, 43

Conread position: 154-381
Cow position: chr16:21185381-21185607 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 134
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 164, 87

Conread position: 166-381
Cow position: chr16:42671241-42671453 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 149, 68

Conread position: 187-386
Cow position: chr16:28377013-28377215 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 19, 50

Conread position: 188-381
Cow position: chr16:19152083-19151887 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 26, 56

Conread position: 192-384
Cow position: chr16:11283110-11283305 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 156
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 22, 50

Conread position: 208-365
Cow position: chr16:41166946-41166795 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 113, 15

Conread position: 219-381
Cow position: chr16:26374422-26374584 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 99, 18

Conread position: 243-381
Cow position: chr16:23536035-23535897 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 77, 24

Conread position: 622-847
Cow position: chr16:7676484-7676265 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 62, 0

Conread position: 635-847
Cow position: chr16:26663731-26663942 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 164
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 80, 0

Conread position: 644-846
Cow position: chr16:407043-406845 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr16:1567462-1567260 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr16:2483149-2482947 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr16:2727297-2727096 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr16:10438227-10438444 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 151, 71

Conread position: 644-847
Cow position: chr16:12537934-12537735 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr16:15476832-15477033 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr16:31591929-31591727 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 73, 0

Conread position: 644-847
Cow position: chr16:40296186-40295984 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 71, 0

Conread position: 645-847
Cow position: chr16:8816113-8815914 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 160
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 70, 0

Conread position: 647-847
Cow position: chr16:49234670-49234468 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 651-838
Cow position: chr16:37456023-37455830 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 154
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 43, 75

Conread position: 653-847
Cow position: chr16:51405936-51405759 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 659-847
Cow position: chr16:18498285-18498095 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 150
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 155, 0

Conread position: 1-114
Cow position: chr17:13856583-13856470 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-210
Cow position: chr17:20488189-20488393 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 75, 116

Conread position: 1-229
Cow position: chr17:19269179-19268950 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 40

Conread position: 1-307
Cow position: chr17:20811708-20811401 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 204
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 28, 113

Conread position: 1-342
Cow position: chr17:15850585-15850929 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 237

Conread position: 1-355
Cow position: chr17:4082248-4082589 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 244
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 27, 121

Conread position: 1-376
Cow position: chr17:14894341-14894720 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-376
Cow position: chr17:40805005-40805376 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 236

Conread position: 1-381
Cow position: chr17:3642649-3642268 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 240

Conread position: 1-381
Cow position: chr17:4060284-4060664 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 244

Conread position: 1-381
Cow position: chr17:6068747-6069121 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 41

Conread position: 1-381
Cow position: chr17:11087537-11087158 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 159

Conread position: 1-381
Cow position: chr17:18103498-18103123 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 86

Conread position: 1-381
Cow position: chr17:24029812-24029440 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 136

Conread position: 1-385
Cow position: chr17:15156784-15156401 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 175

Conread position: 1-386
Cow position: chr17:3708589-3708206 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 43

Conread position: 1-386
Cow position: chr17:14040841-14040464 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 41

Conread position: 1-386
Cow position: chr17:20087560-20087175 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-386
Cow position: chr17:22132417-22132800 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 237

Conread position: 2-381
Cow position: chr17:19019760-19020139 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 122

Conread position: 4-260
Cow position: chr17:15384470-15384726 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 99, 241

Conread position: 5-168
Cow position: chr17:25737854-25738018 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 100, 0

Conread position: 5-371
Cow position: chr17:1880281-1880656 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 102

Conread position: 5-380
Cow position: chr17:1657650-1657285 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 261
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 101, 14

Conread position: 5-381
Cow position: chr17:2579806-2580187 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 234

Conread position: 5-381
Cow position: chr17:6260035-6260414 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 50

Conread position: 5-386
Cow position: chr17:18300204-18299826 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 89

Conread position: 6-151
Cow position: chr17:181549-181693 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 6-159
Cow position: chr17:24634140-24634294 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 99, 0

Conread position: 6-235
Cow position: chr17:43952377-43952146 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 6-323
Cow position: chr17:2030332-2030650 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 223
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 69, 55

Conread position: 6-381
Cow position: chr17:250349-250730 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 220

Conread position: 6-384
Cow position: chr17:15435977-15436359 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr17:228122-227738 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr17:1382628-1382249 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 239

Conread position: 6-386
Cow position: chr17:2262288-2262673 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 233

Conread position: 6-386
Cow position: chr17:6119894-6120281 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 75

Conread position: 6-386
Cow position: chr17:8209292-8209677 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 233

Conread position: 6-386
Cow position: chr17:14216840-14216464 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 153

Conread position: 6-386
Cow position: chr17:15143181-15142798 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr17:20665540-20665155 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 238

Conread position: 6-386
Cow position: chr17:23324268-23323884 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr17:24782353-24782729 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 131

Conread position: 6-386
Cow position: chr17:31767853-31767472 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 233

Conread position: 6-386
Cow position: chr17:34156314-34156687 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 177

Conread position: 7-381
Cow position: chr17:151684-151309 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 44

Conread position: 9-381
Cow position: chr17:5226812-5227186 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 228

Conread position: 10-287
Cow position: chr17:42265116-42265394 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 192
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 109, 157

Conread position: 11-343
Cow position: chr17:38873813-38874147 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 213
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 48, 57

Conread position: 13-381
Cow position: chr17:15324021-15324393 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 225

Conread position: 13-381
Cow position: chr17:16857325-16856954 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 229

Conread position: 21-361
Cow position: chr17:13695785-13695448 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 233
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 188, 86

Conread position: 22-342
Cow position: chr17:11376582-11376257 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 221

Conread position: 23-354
Cow position: chr17:20183642-20183957 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 46

Conread position: 26-327
Cow position: chr17:2174095-2174381 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 79, 18

Conread position: 39-356
Cow position: chr17:18194050-18194359 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 225
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 59, 200

Conread position: 78-386
Cow position: chr17:43988760-43989070 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 74

Conread position: 80-381
Cow position: chr17:20402669-20402986 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 231
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 26, 275

Conread position: 99-422
Cow position: chr17:41315704-41315394 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 216
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 103, 48

Conread position: 102-386
Cow position: chr17:9081157-9080870 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 140

Conread position: 130-376
Cow position: chr17:6001134-6000885 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 58, 113

Conread position: 143-386
Cow position: chr17:11783171-11783414 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 152
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 63, 94

Conread position: 146-385
Cow position: chr17:2247741-2247501 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 183
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 56, 91

Conread position: 155-319
Cow position: chr17:25897360-25897524 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 81

Conread position: 213-386
Cow position: chr17:181695-181868 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 111, 28

Conread position: 214-358
Cow position: chr17:2148631-2148772 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 20

Conread position: 224-377
Cow position: chr17:14238870-14239023 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 13

Conread position: 232-381
Cow position: chr17:19268417-19268266 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 88, 11

Conread position: 273-386
Cow position: chr17:20100020-20099908 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 93, 54

Conread position: 640-847
Cow position: chr17:22132789-22132990 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 158
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 62, 0

Conread position: 644-840
Cow position: chr17:6260412-6260614 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 51, 78

Conread position: 644-847
Cow position: chr17:18103125-18102926 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr17:24029442-24029240 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 645-847
Cow position: chr17:40805376-40805573 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 47, 0

Conread position: 651-847
Cow position: chr17:19268260-19268065 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 154
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 64, 0

Conread position: 1-335
Cow position: chr18:37505458-37505791 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 78

Conread position: 1-370
Cow position: chr18:27837921-27837552 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-381
Cow position: chr18:14130786-14131166 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr18:14416371-14416758 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 240

Conread position: 1-381
Cow position: chr18:16176223-16175841 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 183

Conread position: 1-381
Cow position: chr18:23798042-23798421 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 32

Conread position: 1-381
Cow position: chr18:25363617-25363993 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 253
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 54, 32

Conread position: 1-381
Cow position: chr18:27987459-27987845 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr18:28973507-28973111 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 255

Conread position: 1-381
Cow position: chr18:32652598-32652990 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 56

Conread position: 1-381
Cow position: chr18:36508728-36509112 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 237

Conread position: 1-381
Cow position: chr18:40478778-40479162 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr18:41840429-41840035 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 246

Conread position: 1-381
Cow position: chr18:51481230-51481613 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 55

Conread position: 1-381
Cow position: chr18:52651315-52651690 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 15

Conread position: 1-386
Cow position: chr18:33269221-33269603 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 78

Conread position: 1-386
Cow position: chr18:33336258-33336650 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 239

Conread position: 1-386
Cow position: chr18:33750411-33750791 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 62

Conread position: 1-386
Cow position: chr18:54023730-54023357 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 145

Conread position: 1-386
Cow position: chr18:54171142-54170753 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 160

Conread position: 2-264
Cow position: chr18:46868165-46867911 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 184
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 66, 40

Conread position: 2-349
Cow position: chr18:8169098-8169448 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 236

Conread position: 2-376
Cow position: chr18:29765368-29765746 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 235

Conread position: 2-386
Cow position: chr18:16088542-16088925 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 236

Conread position: 6-258
Cow position: chr18:54003921-54004163 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 202, 83

Conread position: 6-375
Cow position: chr18:51276606-51276240 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 250
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 20, 7

Conread position: 6-381
Cow position: chr18:19352776-19353144 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 21

Conread position: 6-386
Cow position: chr18:11274712-11274328 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr18:22602881-22603263 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 143

Conread position: 6-386
Cow position: chr18:33953181-33952802 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 111

Conread position: 6-386
Cow position: chr18:51342080-51342464 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 238

Conread position: 6-386
Cow position: chr18:51462685-51462305 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 61

Conread position: 6-386
Cow position: chr18:51660741-51661120 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 182

Conread position: 6-387
Cow position: chr18:55088530-55088141 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 241

Conread position: 8-356
Cow position: chr18:46691147-46690806 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 223
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 8

Conread position: 8-386
Cow position: chr18:24040336-24039947 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 242

Conread position: 9-386
Cow position: chr18:25351151-25351534 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 232

Conread position: 11-365
Cow position: chr18:54270913-54271261 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 147

Conread position: 23-381
Cow position: chr18:51238711-51239071 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 248
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 75, 130

Conread position: 27-379
Cow position: chr18:55991319-55990984 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 248
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 291, 17

Conread position: 41-356
Cow position: chr18:46669489-46669179 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 208
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 12, 33

Conread position: 73-384
Cow position: chr18:16079138-16079447 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 44

Conread position: 80-333
Cow position: chr18:208148-207901 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 35

Conread position: 82-381
Cow position: chr18:36256748-36256456 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 198
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 70

Conread position: 91-356
Cow position: chr18:10036366-10036094 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 181
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 156

Conread position: 116-381
Cow position: chr18:51275529-51275263 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 46, 123

Conread position: 127-381
Cow position: chr18:19406027-19405771 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 171
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 75, 114

Conread position: 197-386
Cow position: chr18:29237536-29237714 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 210-381
Cow position: chr18:20262782-20262611 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 122, 32

Conread position: 631-847
Cow position: chr18:27837549-27837337 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 54, 13

Conread position: 635-847
Cow position: chr18:16175853-16175643 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 10, 75

Conread position: 644-840
Cow position: chr18:41840037-41839842 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 152
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 69, 0

Conread position: 644-846
Cow position: chr18:40479160-40479361 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr18:14416756-14416958 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr18:28973113-28972911 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr18:37506732-37506934 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr18:52651688-52651885 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 40, 0

Conread position: 650-847
Cow position: chr18:25351533-25351729 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 63, 0

Conread position: 1-240
Cow position: chr19:352249-352012 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 180
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 126, 30

Conread position: 1-342
Cow position: chr19:136608-136277 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 19

Conread position: 1-351
Cow position: chr19:40852038-40851687 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 163

Conread position: 1-352
Cow position: chr19:3138336-3138689 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 218

Conread position: 1-381
Cow position: chr19:172611-172987 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 78

Conread position: 1-381
Cow position: chr19:204356-204737 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr19:439041-438658 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 241

Conread position: 1-381
Cow position: chr19:2273986-2273604 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 238

Conread position: 1-381
Cow position: chr19:5729229-5729613 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr19:7488712-7489092 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 66

Conread position: 1-381
Cow position: chr19:33873826-33874203 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 151

Conread position: 1-381
Cow position: chr19:33942010-33942382 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 51

Conread position: 1-381
Cow position: chr19:39185146-39184761 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 340

Conread position: 1-381
Cow position: chr19:39390908-39391288 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 162

Conread position: 1-382
Cow position: chr19:893208-892824 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 236

Conread position: 1-386
Cow position: chr19:162700-162324 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 79

Conread position: 2-215
Cow position: chr19:10514092-10513877 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 15, 68

Conread position: 2-372
Cow position: chr19:39669108-39668744 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 74

Conread position: 2-381
Cow position: chr19:4386012-4386404 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 148

Conread position: 3-381
Cow position: chr19:341621-341996 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 54

Conread position: 4-348
Cow position: chr19:33444025-33443676 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 240
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 25, 11

Conread position: 4-361
Cow position: chr19:32182678-32182327 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 251
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 92, 142

Conread position: 4-386
Cow position: chr19:35385345-35384966 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 256
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 114, 16

Conread position: 5-381
Cow position: chr19:75848-75473 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 39

Conread position: 5-381
Cow position: chr19:28581257-28580881 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 233

Conread position: 5-381
Cow position: chr19:40887331-40886967 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 17

Conread position: 5-386
Cow position: chr19:27052111-27051722 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 33

Conread position: 6-179
Cow position: chr19:5208570-5208744 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 99, 0

Conread position: 6-211
Cow position: chr19:38293-38499 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 99, 199

Conread position: 6-354
Cow position: chr19:28593662-28594008 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 182

Conread position: 6-384
Cow position: chr19:52151432-52151053 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr19:772994-773377 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 169

Conread position: 6-386
Cow position: chr19:7342469-7342849 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 25

Conread position: 6-386
Cow position: chr19:32211675-32211293 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr19:43144114-43144492 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 67

Conread position: 7-361
Cow position: chr19:39095444-39095800 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 244
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 77, 160

Conread position: 19-172
Cow position: chr19:43511-43663 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 32, 9

Conread position: 20-347
Cow position: chr19:27037130-27036815 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 233
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 85, 37

Conread position: 22-386
Cow position: chr19:20105125-20105492 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 221

Conread position: 23-384
Cow position: chr19:168185-167820 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 215

Conread position: 27-381
Cow position: chr19:674819-674467 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 236
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 71, 57

Conread position: 40-376
Cow position: chr19:32203581-32203919 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 238
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 60, 161

Conread position: 44-361
Cow position: chr19:5901058-5900738 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 223

Conread position: 86-374
Cow position: chr19:10956746-10956460 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 199
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 9, 89

Conread position: 90-381
Cow position: chr19:12773602-12773895 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 69

Conread position: 109-305
Cow position: chr19:189924-190119 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 105, 128

Conread position: 144-386
Cow position: chr19:28406166-28405921 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 49

Conread position: 145-307
Cow position: chr19:40817183-40817026 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 15, 92

Conread position: 152-281
Cow position: chr19:50685239-50685366 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 36

Conread position: 166-367
Cow position: chr19:35377930-35378133 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 48, 76

Conread position: 188-335
Cow position: chr19:377028-376878 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 17, 55

Conread position: 192-377
Cow position: chr19:38793-38977 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 15, 51

Conread position: 197-381
Cow position: chr19:53844166-53844366 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 45

Conread position: 234-386
Cow position: chr19:28567294-28567141 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 85, 5

Conread position: 640-846
Cow position: chr19:28580887-28580682 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 159
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 75, 0

Conread position: 644-784
Cow position: chr19:204735-204876 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 71

Conread position: 644-790
Cow position: chr19:39668716-39668576 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 644-821
Cow position: chr19:39002283-39002107 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr19:33942380-33942582 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 65, 0

Conread position: 644-847
Cow position: chr19:39184763-39184561 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 1-134
Cow position: chr2:4926334-4926200 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 104, 0

Conread position: 1-143
Cow position: chr2:1363002-1363144 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-207
Cow position: chr2:69584786-69584578 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 24, 0

Conread position: 1-235
Cow position: chr2:50983387-50983152 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 112

Conread position: 1-244
Cow position: chr2:81256646-81256893 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 1-256
Cow position: chr2:5963240-5962984 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 242

Conread position: 1-263
Cow position: chr2:52062509-52062770 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 115

Conread position: 1-321
Cow position: chr2:53498502-53498208 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 221
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 1-343
Cow position: chr2:28642978-28642642 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 43

Conread position: 1-345
Cow position: chr2:20029252-20029595 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 227
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 43

Conread position: 1-346
Cow position: chr2:78762302-78762631 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 70

Conread position: 1-352
Cow position: chr2:35355538-35355885 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 26

Conread position: 1-364
Cow position: chr2:28650390-28650025 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 78

Conread position: 1-365
Cow position: chr2:12224472-12224100 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 245

Conread position: 1-374
Cow position: chr2:5485135-5484769 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 44

Conread position: 1-374
Cow position: chr2:53329595-53329971 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 238

Conread position: 1-376
Cow position: chr2:19011182-19011560 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 241

Conread position: 1-376
Cow position: chr2:34564762-34564409 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 265
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 104, 121

Conread position: 1-377
Cow position: chr2:5905024-5904649 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 219

Conread position: 1-377
Cow position: chr2:10268818-10268444 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 236

Conread position: 1-377
Cow position: chr2:13045864-13045489 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-378
Cow position: chr2:198950-198571 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 238

Conread position: 1-381
Cow position: chr2:8118378-8118760 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 241

Conread position: 1-381
Cow position: chr2:10186391-10186010 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 78

Conread position: 1-381
Cow position: chr2:11159285-11158900 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-381
Cow position: chr2:16900091-16900471 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr2:24146701-24147088 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 236

Conread position: 1-381
Cow position: chr2:28793094-28793468 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr2:36980217-36980600 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 56

Conread position: 1-381
Cow position: chr2:42333011-42332648 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 20

Conread position: 1-381
Cow position: chr2:50077439-50077819 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 118

Conread position: 1-381
Cow position: chr2:65938609-65938231 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 34

Conread position: 1-384
Cow position: chr2:10732929-10732552 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 229

Conread position: 1-384
Cow position: chr2:44991455-44991070 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 146

Conread position: 1-386
Cow position: chr2:11729709-11730087 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 30

Conread position: 1-386
Cow position: chr2:39622462-39622834 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 135

Conread position: 1-386
Cow position: chr2:40538324-40538700 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 263
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 21, 91

Conread position: 1-386
Cow position: chr2:41172512-41172892 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 50

Conread position: 1-386
Cow position: chr2:47603410-47603023 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 241

Conread position: 2-113
Cow position: chr2:572879-572991 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 2-343
Cow position: chr2:175690-175345 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 241

Conread position: 2-386
Cow position: chr2:36053153-36052784 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 50

Conread position: 2-386
Cow position: chr2:80955800-80955415 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 241

Conread position: 3-388
Cow position: chr2:29029980-29030367 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 277
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 80, 156

Conread position: 4-338
Cow position: chr2:34938570-34938915 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 227
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 17

Conread position: 5-235
Cow position: chr2:63978154-63978384 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 204, 93

Conread position: 5-357
Cow position: chr2:781594-781246 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 160

Conread position: 5-365
Cow position: chr2:20902695-20902353 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 38

Conread position: 5-366
Cow position: chr2:45919720-45919362 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 244
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 110, 39

Conread position: 5-381
Cow position: chr2:282847-282467 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 5-381
Cow position: chr2:80293108-80292733 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 232

Conread position: 5-384
Cow position: chr2:36030492-36030136 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 83

Conread position: 6-154
Cow position: chr2:2184416-2184267 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 99, 0

Conread position: 6-239
Cow position: chr2:51990690-51990457 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 104
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 6-251
Cow position: chr2:44497613-44497370 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 160
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 200, 109

Conread position: 6-264
Cow position: chr2:44091141-44091400 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-305
Cow position: chr2:39421419-39421717 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 154

Conread position: 6-310
Cow position: chr2:54737346-54737651 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-333
Cow position: chr2:5870511-5870191 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 35

Conread position: 6-335
Cow position: chr2:24922239-24922567 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 61

Conread position: 6-355
Cow position: chr2:25030636-25030288 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 114

Conread position: 6-364
Cow position: chr2:57588536-57588897 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-381
Cow position: chr2:26921525-26921892 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 139

Conread position: 6-384
Cow position: chr2:57335036-57335418 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-385
Cow position: chr2:3324724-3324337 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 241

Conread position: 6-386
Cow position: chr2:212382-212001 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr2:2088333-2087949 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 237

Conread position: 6-386
Cow position: chr2:2380948-2381328 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 231

Conread position: 6-386
Cow position: chr2:2412956-2412572 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 236

Conread position: 6-386
Cow position: chr2:4403317-4402935 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr2:5474356-5474740 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr2:5813538-5813169 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 81

Conread position: 6-386
Cow position: chr2:9907753-9908137 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr2:10611786-10611412 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 112

Conread position: 6-386
Cow position: chr2:41686354-41686733 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 51

Conread position: 6-386
Cow position: chr2:47038574-47038190 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr2:49472087-49472471 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr2:49590241-49590625 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 231

Conread position: 6-386
Cow position: chr2:51990408-51990031 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 231

Conread position: 6-386
Cow position: chr2:52616310-52616695 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 232

Conread position: 6-387
Cow position: chr2:59413840-59413459 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 231

Conread position: 7-265
Cow position: chr2:67419459-67419198 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 98, 233

Conread position: 7-386
Cow position: chr2:22077625-22078008 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 231

Conread position: 8-381
Cow position: chr2:74857084-74857442 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 263
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 39, 22

Conread position: 12-250
Cow position: chr2:903882-904108 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 59, 0

Conread position: 13-386
Cow position: chr2:44935074-44934692 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 230

Conread position: 16-388
Cow position: chr2:16290192-16290561 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 222

Conread position: 18-386
Cow position: chr2:31297651-31298021 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 26

Conread position: 19-386
Cow position: chr2:7902874-7903265 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 246

Conread position: 20-366
Cow position: chr2:52351565-52351914 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 252
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 78, 166

Conread position: 21-381
Cow position: chr2:3835113-3834742 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 224

Conread position: 22-222
Cow position: chr2:39932763-39932963 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 137
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 83, 90

Conread position: 22-381
Cow position: chr2:50323067-50323409 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 254
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 84, 127

Conread position: 22-386
Cow position: chr2:14822979-14823326 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 51

Conread position: 23-381
Cow position: chr2:28620167-28619813 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 195

Conread position: 26-412
Cow position: chr2:42671126-42670739 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 212

Conread position: 27-381
Cow position: chr2:81751250-81750895 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 249
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 34, 114

Conread position: 31-321
Cow position: chr2:76024653-76024929 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 196
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 241, 16

Conread position: 31-348
Cow position: chr2:3502355-3502038 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 215
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 74, 48

Conread position: 31-359
Cow position: chr2:72597477-72597802 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 130

Conread position: 35-201
Cow position: chr2:6961334-6961501 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 70, 0

Conread position: 39-381
Cow position: chr2:36974773-36975111 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 228
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 78

Conread position: 41-381
Cow position: chr2:14777942-14777605 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 243
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 62, 34

Conread position: 41-390
Cow position: chr2:49604815-49605173 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 238

Conread position: 45-212
Cow position: chr2:37789971-37789806 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 25

Conread position: 46-386
Cow position: chr2:41657063-41657399 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 95

Conread position: 61-381
Cow position: chr2:3750696-3751017 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 215
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 264, 132

Conread position: 73-381
Cow position: chr2:32066171-32065862 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 165

Conread position: 87-255
Cow position: chr2:1113308-1113145 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 18, 50

Conread position: 88-381
Cow position: chr2:63292177-63291880 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 18

Conread position: 98-348
Cow position: chr2:78742511-78742754 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 191
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 116, 50

Conread position: 99-381
Cow position: chr2:26070948-26070672 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 188
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 115, 14

Conread position: 107-386
Cow position: chr2:16075569-16075292 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 170

Conread position: 113-381
Cow position: chr2:16281268-16281525 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 139, 25

Conread position: 129-381
Cow position: chr2:15576868-15576619 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 61

Conread position: 131-381
Cow position: chr2:1690944-1691192 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 192
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 83, 111

Conread position: 146-386
Cow position: chr2:34051153-34051391 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 180
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 68, 42

Conread position: 149-386
Cow position: chr2:54485739-54485499 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 93

Conread position: 152-374
Cow position: chr2:740982-740760 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 116, 64

Conread position: 153-386
Cow position: chr2:41150614-41150842 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 56, 84

Conread position: 171-386
Cow position: chr2:51617269-51617478 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 71

Conread position: 178-386
Cow position: chr2:365046-364835 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 165
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 36, 64

Conread position: 183-357
Cow position: chr2:573616-573787 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 31, 62

Conread position: 199-383
Cow position: chr2:73193152-73193337 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 113, 42

Conread position: 211-381
Cow position: chr2:12480020-12479848 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 109, 30

Conread position: 242-387
Cow position: chr2:1113324-1113468 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 83, 28

Conread position: 256-381
Cow position: chr2:6961618-6961743 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 110, 80

Conread position: 259-386
Cow position: chr2:53661439-53661569 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 59, 80

Conread position: 640-846
Cow position: chr2:14823315-14823516 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 640-847
Cow position: chr2:65938237-65938034 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 160
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 76, 0

Conread position: 643-842
Cow position: chr2:41150834-41151032 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 644-847
Cow position: chr2:11158902-11158700 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 644-847
Cow position: chr2:28649381-28649180 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr2:28793466-28793666 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 162
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 15, 0

Conread position: 644-847
Cow position: chr2:42670489-42670287 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr2:80292735-80292535 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 71, 0

Conread position: 645-840
Cow position: chr2:12224094-12223900 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 153
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 70, 0

Conread position: 645-847
Cow position: chr2:10268440-10268239 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 70, 0

Conread position: 645-847
Cow position: chr2:13045486-13045295 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 70, 0

Conread position: 651-847
Cow position: chr2:34564396-34564200 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 170, 58

Conread position: 653-847
Cow position: chr2:282464-282271 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 157
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 1-131
Cow position: chr20:10845765-10845632 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 1-226
Cow position: chr20:37580439-37580660 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 105, 15

Conread position: 1-247
Cow position: chr20:3271059-3271302 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 190
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 106, 152

Conread position: 1-348
Cow position: chr20:3679221-3678879 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 232
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 18, 46

Conread position: 1-348
Cow position: chr20:8003869-8003522 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 78

Conread position: 1-349
Cow position: chr20:28161127-28161473 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 78

Conread position: 1-357
Cow position: chr20:2790547-2790196 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 112

Conread position: 1-357
Cow position: chr20:25850635-25850281 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-378
Cow position: chr20:21393951-21394328 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 241

Conread position: 1-381
Cow position: chr20:5535294-5535672 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 78

Conread position: 1-381
Cow position: chr20:8992865-8992484 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 25

Conread position: 1-381
Cow position: chr20:13763261-13763645 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr20:15097520-15097139 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 190

Conread position: 1-381
Cow position: chr20:16179459-16179077 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 188

Conread position: 1-381
Cow position: chr20:21914684-21915056 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr20:23469309-23468926 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 242

Conread position: 1-381
Cow position: chr20:23799242-23799620 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 142

Conread position: 1-381
Cow position: chr20:29948856-29949240 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 80

Conread position: 1-381
Cow position: chr20:30684677-30685058 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr20:35124852-35125232 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 238

Conread position: 1-386
Cow position: chr20:10840352-10839970 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 12

Conread position: 1-386
Cow position: chr20:13679686-13679305 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 189

Conread position: 1-386
Cow position: chr20:18314952-18314598 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 35

Conread position: 2-381
Cow position: chr20:10854986-10854612 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 59

Conread position: 2-381
Cow position: chr20:12438403-12438023 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 166

Conread position: 4-321
Cow position: chr20:18324815-18324509 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 102, 114

Conread position: 4-381
Cow position: chr20:15292367-15292742 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 53

Conread position: 5-321
Cow position: chr20:20754117-20753817 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 220
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 88, 0

Conread position: 5-354
Cow position: chr20:42905575-42905911 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 70

Conread position: 5-381
Cow position: chr20:28565236-28564853 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 241

Conread position: 5-386
Cow position: chr20:27869558-27869946 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 39

Conread position: 6-165
Cow position: chr20:19352895-19353052 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 99, 15

Conread position: 6-386
Cow position: chr20:823122-823501 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr20:19438294-19438665 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 150

Conread position: 6-386
Cow position: chr20:25961458-25961842 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 238

Conread position: 6-386
Cow position: chr20:38351033-38351415 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 153

Conread position: 12-235
Cow position: chr20:7115119-7114894 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 22-380
Cow position: chr20:8215896-8216252 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 144

Conread position: 23-327
Cow position: chr20:22716952-22716649 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 143

Conread position: 26-360
Cow position: chr20:28302959-28303299 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 216
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 213

Conread position: 27-346
Cow position: chr20:31377821-31377508 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 227
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 153, 56

Conread position: 29-331
Cow position: chr20:24371408-24371111 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 207
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 113, 85

Conread position: 32-381
Cow position: chr20:22697656-22697999 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 157

Conread position: 48-212
Cow position: chr20:38624411-38624575 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 94-381
Cow position: chr20:12568968-12569259 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 144

Conread position: 99-342
Cow position: chr20:15065723-15065964 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 160

Conread position: 106-386
Cow position: chr20:8974354-8974077 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 136

Conread position: 117-381
Cow position: chr20:14870476-14870211 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 118

Conread position: 127-357
Cow position: chr20:35105241-35105473 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 75, 115

Conread position: 134-357
Cow position: chr20:24616370-24616140 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 80, 108

Conread position: 146-381
Cow position: chr20:13434086-13433852 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 68, 92

Conread position: 158-355
Cow position: chr20:19355292-19355484 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 78

Conread position: 165-375
Cow position: chr20:13495415-13495626 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 73

Conread position: 166-381
Cow position: chr20:17661557-17661339 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 172
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 48, 76

Conread position: 640-847
Cow position: chr20:18314609-18314411 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 194, 51

Conread position: 644-846
Cow position: chr20:17661341-17661138 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 158
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 120, 65

Conread position: 644-847
Cow position: chr20:13763643-13763841 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr20:15097141-15096944 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 65, 0

Conread position: 651-847
Cow position: chr20:7113446-7113255 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 154
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 66, 0

Conread position: 1-304
Cow position: chr21:21517995-21518294 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 104, 49

Conread position: 1-323
Cow position: chr21:33251982-33252298 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 83

Conread position: 1-351
Cow position: chr21:27282862-27283214 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-352
Cow position: chr21:359843-360177 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 47

Conread position: 1-360
Cow position: chr21:27565870-27566237 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 69

Conread position: 1-365
Cow position: chr21:30562278-30562640 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 205

Conread position: 1-373
Cow position: chr21:48116576-48116947 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 236

Conread position: 1-377
Cow position: chr21:10567144-10567522 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 231

Conread position: 1-381
Cow position: chr21:146398-146780 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr21:467365-467729 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 77

Conread position: 1-381
Cow position: chr21:2883273-2882887 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 244

Conread position: 1-381
Cow position: chr21:3779242-3779619 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 239

Conread position: 1-381
Cow position: chr21:21915162-21915544 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 134

Conread position: 1-381
Cow position: chr21:35144232-35144613 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr21:40271205-40270821 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-386
Cow position: chr21:2710975-2711348 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 28

Conread position: 1-386
Cow position: chr21:23812652-23813035 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 18

Conread position: 1-387
Cow position: chr21:2416689-2417072 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 60

Conread position: 1-387
Cow position: chr21:2540608-2540233 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 15

Conread position: 1-395
Cow position: chr21:31559184-31558791 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 2-200
Cow position: chr21:46916057-46916251 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 103, 135

Conread position: 2-365
Cow position: chr21:23861796-23862161 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 180

Conread position: 2-367
Cow position: chr21:21925848-21925488 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 127

Conread position: 2-374
Cow position: chr21:29553-29918 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 174

Conread position: 2-387
Cow position: chr21:39425533-39425920 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 4-315
Cow position: chr21:25975750-25976062 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 94, 109

Conread position: 4-381
Cow position: chr21:4093978-4094356 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 257
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 220, 88

Conread position: 5-381
Cow position: chr21:4299010-4299372 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 243
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 60

Conread position: 5-381
Cow position: chr21:9892412-9892760 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 157

Conread position: 5-381
Cow position: chr21:10850556-10850931 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 233

Conread position: 5-386
Cow position: chr21:4589512-4589138 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 47

Conread position: 5-386
Cow position: chr21:13313245-13313619 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 235

Conread position: 5-386
Cow position: chr21:28735709-28736094 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 177

Conread position: 6-168
Cow position: chr21:2674131-2673971 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 29

Conread position: 6-193
Cow position: chr21:6340040-6340228 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 148
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 99, 0

Conread position: 6-212
Cow position: chr21:20744031-20743825 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 101, 167

Conread position: 6-250
Cow position: chr21:26650515-26650760 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 150
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 99, 0

Conread position: 6-323
Cow position: chr21:7267050-7266740 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 7

Conread position: 6-351
Cow position: chr21:2511369-2511717 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 169

Conread position: 6-381
Cow position: chr21:4077310-4077687 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 102

Conread position: 6-386
Cow position: chr21:2476067-2475683 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr21:4091123-4091506 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 18

Conread position: 6-386
Cow position: chr21:11406522-11406138 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr21:11453182-11452800 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 158

Conread position: 6-386
Cow position: chr21:11506070-11506453 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr21:12055527-12055146 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr21:37046094-37046478 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr21:37371719-37372097 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 7-381
Cow position: chr21:30599446-30599071 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 236

Conread position: 12-384
Cow position: chr21:1287738-1287364 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 99

Conread position: 15-381
Cow position: chr21:6622073-6622442 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 119

Conread position: 18-387
Cow position: chr21:47949552-47949915 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 111

Conread position: 20-234
Cow position: chr21:12803561-12803347 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 61, 74

Conread position: 20-376
Cow position: chr21:37148526-37148881 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 253
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 78, 15

Conread position: 22-386
Cow position: chr21:47941349-47941714 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 98

Conread position: 23-331
Cow position: chr21:18819672-18819358 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 26-361
Cow position: chr21:27070767-27070429 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 217

Conread position: 33-381
Cow position: chr21:39087510-39087856 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 43

Conread position: 35-335
Cow position: chr21:2940106-2939805 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 44, 22

Conread position: 41-206
Cow position: chr21:6632206-6632038 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 41-381
Cow position: chr21:1192267-1192611 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 203

Conread position: 104-386
Cow position: chr21:26637624-26637346 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 84

Conread position: 105-281
Cow position: chr21:28255777-28255961 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 104, 144

Conread position: 122-386
Cow position: chr21:2502461-2502727 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 114

Conread position: 157-380
Cow position: chr21:18817934-18817705 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 52, 120

Conread position: 191-381
Cow position: chr21:5840606-5840413 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 155
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 23, 52

Conread position: 193-386
Cow position: chr21:5015631-5015449 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 21, 49

Conread position: 208-386
Cow position: chr21:46916353-46916531 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 68, 33

Conread position: 213-386
Cow position: chr21:27149595-27149767 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 141
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 153, 28

Conread position: 224-376
Cow position: chr21:37323898-37323750 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 142, 17

Conread position: 272-386
Cow position: chr21:28256169-28256286 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 66

Conread position: 616-847
Cow position: chr21:27070147-27069917 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 11, 100

Conread position: 640-847
Cow position: chr21:360488-360694 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 161
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 77, 0

Conread position: 644-837
Cow position: chr21:30599073-30598880 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 58, 72

Conread position: 644-846
Cow position: chr21:26402639-26402438 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 644-847
Cow position: chr21:2882889-2882687 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 69, 0

Conread position: 644-847
Cow position: chr21:5840415-5840213 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr21:35144611-35144808 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 163
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 71, 0

Conread position: 651-847
Cow position: chr21:18817698-18817503 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 152
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 66, 0

Conread position: 1-125
Cow position: chr22:1522313-1522438 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 1-193
Cow position: chr22:15851617-15851810 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 105, 182

Conread position: 1-235
Cow position: chr22:1322425-1322660 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 145

Conread position: 1-258
Cow position: chr22:46581292-46581034 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 104, 237

Conread position: 1-260
Cow position: chr22:11781851-11781591 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 104, 175

Conread position: 1-265
Cow position: chr22:36269527-36269796 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 51, 20

Conread position: 1-285
Cow position: chr22:37132719-37133007 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 240

Conread position: 1-298
Cow position: chr22:13918129-13918432 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 292

Conread position: 1-342
Cow position: chr22:3306101-3305759 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 244

Conread position: 1-377
Cow position: chr22:18816083-18815703 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-377
Cow position: chr22:35907091-35906727 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 72

Conread position: 1-381
Cow position: chr22:560402-560022 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 186

Conread position: 1-381
Cow position: chr22:1520712-1520341 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 127

Conread position: 1-381
Cow position: chr22:15313648-15313270 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 42

Conread position: 1-381
Cow position: chr22:17328437-17328053 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr22:19143389-19143011 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr22:21589627-21590016 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 37

Conread position: 1-381
Cow position: chr22:31313642-31314025 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 231

Conread position: 1-381
Cow position: chr22:31334735-31334356 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 238

Conread position: 1-381
Cow position: chr22:39469220-39468842 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 244

Conread position: 1-381
Cow position: chr22:44396745-44397129 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 237

Conread position: 1-381
Cow position: chr22:44934279-44934663 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-384
Cow position: chr22:34599707-34600076 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 106

Conread position: 1-386
Cow position: chr22:11032053-11032436 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 62

Conread position: 1-386
Cow position: chr22:37072775-37072397 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 72

Conread position: 1-386
Cow position: chr22:48004836-48005224 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 113

Conread position: 1-388
Cow position: chr22:6502832-6502449 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 78

Conread position: 2-223
Cow position: chr22:41239383-41239611 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 98, 185

Conread position: 2-333
Cow position: chr22:13674495-13674169 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 218
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 59

Conread position: 2-345
Cow position: chr22:15955871-15955532 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 26

Conread position: 2-357
Cow position: chr22:46630746-46630388 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 82

Conread position: 2-377
Cow position: chr22:42991475-42991854 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 236

Conread position: 2-381
Cow position: chr22:36184060-36184436 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 71

Conread position: 2-381
Cow position: chr22:36861230-36860851 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 241

Conread position: 2-386
Cow position: chr22:8739916-8739529 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 52

Conread position: 2-387
Cow position: chr22:23853966-23854334 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 77

Conread position: 3-331
Cow position: chr22:14208114-14207785 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 224
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 10, 231

Conread position: 4-342
Cow position: chr22:36580495-36580153 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 239
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 39, 32

Conread position: 4-356
Cow position: chr22:36552150-36551802 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 238
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 75, 80

Conread position: 5-292
Cow position: chr22:525388-525100 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 233

Conread position: 5-305
Cow position: chr22:5940984-5940690 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 211
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 98, 11

Conread position: 5-371
Cow position: chr22:44352673-44352317 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 77

Conread position: 5-376
Cow position: chr22:24536055-24536422 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 26

Conread position: 5-381
Cow position: chr22:34168637-34169017 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 233

Conread position: 5-384
Cow position: chr22:12731369-12730987 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 233

Conread position: 6-143
Cow position: chr22:44490186-44490324 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 99, 0

Conread position: 6-266
Cow position: chr22:16814187-16814448 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 231

Conread position: 6-384
Cow position: chr22:326863-326487 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 89

Conread position: 6-386
Cow position: chr22:537402-537784 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 38

Conread position: 6-386
Cow position: chr22:693924-694309 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 237

Conread position: 6-386
Cow position: chr22:1879094-1879477 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 67

Conread position: 6-386
Cow position: chr22:3278055-3277674 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 169

Conread position: 6-386
Cow position: chr22:5232981-5232596 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 233

Conread position: 6-386
Cow position: chr22:6020964-6021346 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 169

Conread position: 6-386
Cow position: chr22:10909532-10909153 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 73

Conread position: 6-386
Cow position: chr22:18027580-18027965 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 233

Conread position: 6-386
Cow position: chr22:24950397-24950781 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr22:27284333-27284710 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 231

Conread position: 6-386
Cow position: chr22:27309472-27309092 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 27

Conread position: 6-386
Cow position: chr22:35672055-35671671 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 236

Conread position: 6-386
Cow position: chr22:44369324-44368943 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 61

Conread position: 6-387
Cow position: chr22:5308408-5308785 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 175

Conread position: 8-386
Cow position: chr22:20240539-20240159 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 59

Conread position: 11-721
Cow position: chr22:1269481-1268774 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 136

Conread position: 21-211
Cow position: chr22:5932510-5932317 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 84, 149

Conread position: 41-229
Cow position: chr22:36275772-36275961 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 64, 32

Conread position: 41-345
Cow position: chr22:8897485-8897799 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 214
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 18, 23

Conread position: 46-297
Cow position: chr22:35942436-35942188 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 52, 30

Conread position: 84-386
Cow position: chr22:14629796-14630102 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 159

Conread position: 89-348
Cow position: chr22:8649345-8649091 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 178
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 235, 10

Conread position: 100-386
Cow position: chr22:42988958-42989247 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 136

Conread position: 109-343
Cow position: chr22:1282950-1282720 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 212, 100

Conread position: 119-381
Cow position: chr22:46522071-46521810 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 28

Conread position: 126-381
Cow position: chr22:44457477-44457734 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 111

Conread position: 128-386
Cow position: chr22:44491457-44491717 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 109

Conread position: 129-343
Cow position: chr22:4230409-4230194 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 106

Conread position: 142-330
Cow position: chr22:11640185-11640001 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 72, 95

Conread position: 151-334
Cow position: chr22:2627328-2627147 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 57, 86

Conread position: 226-386
Cow position: chr22:11804535-11804373 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 92, 15

Conread position: 234-381
Cow position: chr22:9287117-9287267 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 245-381
Cow position: chr22:36129454-36129593 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 94

Conread position: 643-811
Cow position: chr22:44368951-44368784 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 74, 0

Conread position: 644-844
Cow position: chr22:34169015-34169214 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 159
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr22:1520343-1520145 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 65, 0

Conread position: 644-847
Cow position: chr22:6332396-6332589 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 69, 0

Conread position: 644-847
Cow position: chr22:31334358-31334157 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr22:36129591-36129793 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr22:36860853-36860654 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr22:37292993-37292787 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 164
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 174, 71

Conread position: 645-846
Cow position: chr22:42991857-42992057 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 70, 0

Conread position: 650-847
Cow position: chr22:18815695-18815502 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 7, 0

Conread position: 660-847
Cow position: chr22:17327762-17327576 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 182, 55

Conread position: 1-111
Cow position: chr23:30635998-30635888 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-192
Cow position: chr23:2026816-2026620 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 159
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 104, 0

Conread position: 1-209
Cow position: chr23:2574837-2575047 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 136

Conread position: 1-250
Cow position: chr23:25683738-25683488 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 192

Conread position: 1-256
Cow position: chr23:31594944-31594693 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 190
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 105, 26

Conread position: 1-287
Cow position: chr23:29452014-29451734 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 101

Conread position: 1-290
Cow position: chr23:11778791-11779076 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-322
Cow position: chr23:2341392-2341714 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 34

Conread position: 1-341
Cow position: chr23:14965449-14965106 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 238

Conread position: 1-354
Cow position: chr23:15877464-15877116 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 93

Conread position: 1-356
Cow position: chr23:7046357-7045990 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 260
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 78, 191

Conread position: 1-356
Cow position: chr23:14262161-14262517 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 247
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 14, 130

Conread position: 1-357
Cow position: chr23:20155913-20155554 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 243

Conread position: 1-381
Cow position: chr23:967047-966659 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 250

Conread position: 1-381
Cow position: chr23:2716693-2717072 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 25

Conread position: 1-381
Cow position: chr23:4640321-4639943 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 72

Conread position: 1-381
Cow position: chr23:15177374-15177754 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 40

Conread position: 1-381
Cow position: chr23:19489844-19490223 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr23:27399806-27400186 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 23

Conread position: 1-381
Cow position: chr23:28913696-28914075 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 72

Conread position: 1-386
Cow position: chr23:2781911-2781531 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 165

Conread position: 1-386
Cow position: chr23:3014695-3015084 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 243

Conread position: 1-386
Cow position: chr23:4888975-4889369 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 146

Conread position: 1-396
Cow position: chr23:2757897-2758296 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 231

Conread position: 2-229
Cow position: chr23:22146950-22146721 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 2-381
Cow position: chr23:5874338-5873970 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 41

Conread position: 2-381
Cow position: chr23:15219596-15219225 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 77

Conread position: 4-356
Cow position: chr23:26836970-26837310 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 251
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 101, 69

Conread position: 4-361
Cow position: chr23:13509956-13510320 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 250
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 31, 221

Conread position: 5-218
Cow position: chr23:15525918-15526132 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 70

Conread position: 5-232
Cow position: chr23:17185997-17186227 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 156
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 141, 87

Conread position: 5-357
Cow position: chr23:4752905-4753250 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 13

Conread position: 5-381
Cow position: chr23:4510384-4510746 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 112

Conread position: 5-381
Cow position: chr23:36031069-36030694 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 74

Conread position: 6-304
Cow position: chr23:4434760-4435057 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-307
Cow position: chr23:17786021-17785719 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-366
Cow position: chr23:20302512-20302865 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 206

Conread position: 6-376
Cow position: chr23:16616538-16616167 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-384
Cow position: chr23:19950285-19949915 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 17

Conread position: 6-386
Cow position: chr23:2312938-2312558 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 236

Conread position: 6-386
Cow position: chr23:4360130-4360492 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 139

Conread position: 6-386
Cow position: chr23:23830267-23830645 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 67

Conread position: 6-386
Cow position: chr23:28217591-28217975 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr23:31447116-31447500 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 8-333
Cow position: chr23:14974254-14973925 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 167

Conread position: 12-381
Cow position: chr23:16615123-16614757 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 48

Conread position: 20-358
Cow position: chr23:14779059-14778726 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 228
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 62, 31

Conread position: 21-377
Cow position: chr23:4817338-4817695 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 217

Conread position: 22-386
Cow position: chr23:1024700-1024327 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 57

Conread position: 23-381
Cow position: chr23:1402175-1401823 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 96

Conread position: 27-357
Cow position: chr23:2794907-2794577 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 40

Conread position: 27-386
Cow position: chr23:14948413-14948055 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 245
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 181, 72

Conread position: 68-377
Cow position: chr23:28077736-28078044 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 84

Conread position: 68-381
Cow position: chr23:27970903-27971220 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 170

Conread position: 68-381
Cow position: chr23:28025032-28025349 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 170

Conread position: 68-386
Cow position: chr23:28108025-28108335 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 142

Conread position: 73-350
Cow position: chr23:31649573-31649301 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 206
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 46, 66

Conread position: 80-387
Cow position: chr23:28368145-28367834 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 163

Conread position: 86-328
Cow position: chr23:619051-618821 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 128, 27

Conread position: 93-365
Cow position: chr23:7364332-7364589 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 116, 88

Conread position: 99-317
Cow position: chr23:22874787-22874579 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 116, 59

Conread position: 116-375
Cow position: chr23:3861311-3861049 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 177
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 100, 122

Conread position: 128-358
Cow position: chr23:16499021-16498790 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 190, 108

Conread position: 153-377
Cow position: chr23:3880626-3880404 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 181
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 61, 89

Conread position: 167-361
Cow position: chr23:12887514-12887329 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 47, 75

Conread position: 175-381
Cow position: chr23:2026610-2026400 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 63

Conread position: 182-386
Cow position: chr23:3706599-3706805 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 166
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 27, 55

Conread position: 198-334
Cow position: chr23:2575462-2575596 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 201-321
Cow position: chr23:38794702-38794822 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 41

Conread position: 278-386
Cow position: chr23:10157760-10157871 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 60

Conread position: 636-844
Cow position: chr23:27400176-27400383 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 160
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 79, 0

Conread position: 644-841
Cow position: chr23:11779464-11779656 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 71, 0

Conread position: 644-846
Cow position: chr23:2026402-2026201 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr23:4639945-4639746 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 65, 0

Conread position: 644-847
Cow position: chr23:4817699-4817900 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 48, 0

Conread position: 644-847
Cow position: chr23:15219227-15219024 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 119, 71

Conread position: 645-769
Cow position: chr23:14964796-14964672 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 70, 61

Conread position: 645-847
Cow position: chr23:3880401-3880203 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 48, 0

Conread position: 650-847
Cow position: chr23:20155536-20155340 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 156
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 63, 0

Conread position: 1-168
Cow position: chr24:37217401-37217564 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 104, 114

Conread position: 1-260
Cow position: chr24:12232586-12232338 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 104, 121

Conread position: 1-323
Cow position: chr24:13302154-13301818 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 240
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 96, 255

Conread position: 1-364
Cow position: chr24:12130585-12130226 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 40

Conread position: 1-365
Cow position: chr24:16648596-16648231 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 51

Conread position: 1-377
Cow position: chr24:22971479-22971855 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 41

Conread position: 1-380
Cow position: chr24:29187672-29188054 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 231

Conread position: 1-381
Cow position: chr24:6669760-6669379 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 118

Conread position: 1-381
Cow position: chr24:12086588-12086971 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 175

Conread position: 1-381
Cow position: chr24:12335387-12334994 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 251

Conread position: 1-381
Cow position: chr24:17696589-17696207 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 181

Conread position: 1-381
Cow position: chr24:19833774-19834155 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 241

Conread position: 2-222
Cow position: chr24:7090782-7090557 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 104, 0

Conread position: 2-381
Cow position: chr24:4415140-4414767 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 168

Conread position: 2-381
Cow position: chr24:33933756-33934139 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 240

Conread position: 2-385
Cow position: chr24:14390170-14389766 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 71

Conread position: 4-357
Cow position: chr24:14872572-14872217 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 243
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 109, 15

Conread position: 4-365
Cow position: chr24:6048982-6049319 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 247
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 113, 66

Conread position: 4-384
Cow position: chr24:1449645-1450012 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 111

Conread position: 5-322
Cow position: chr24:9091894-9091574 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 47

Conread position: 5-341
Cow position: chr24:16472287-16472624 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 79

Conread position: 5-360
Cow position: chr24:36559369-36559013 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 214

Conread position: 5-380
Cow position: chr24:148226-147846 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 237

Conread position: 5-381
Cow position: chr24:12237623-12238008 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 242

Conread position: 5-381
Cow position: chr24:38637932-38638300 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 238

Conread position: 5-385
Cow position: chr24:6024717-6024335 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 63

Conread position: 6-183
Cow position: chr24:16084268-16084090 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 99, 0

Conread position: 6-206
Cow position: chr24:8030538-8030739 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 71, 170

Conread position: 6-216
Cow position: chr24:6434625-6434835 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 99, 198

Conread position: 6-316
Cow position: chr24:7061781-7062092 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-343
Cow position: chr24:40549260-40549592 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 96

Conread position: 6-351
Cow position: chr24:33738953-33738604 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 239

Conread position: 6-381
Cow position: chr24:6538350-6538720 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 206

Conread position: 6-385
Cow position: chr24:22793559-22793946 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 235

Conread position: 6-386
Cow position: chr24:5992842-5992455 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 239

Conread position: 6-386
Cow position: chr24:6646087-6646471 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr24:9188345-9187964 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 157

Conread position: 6-386
Cow position: chr24:13188560-13188941 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 238

Conread position: 6-386
Cow position: chr24:29305936-29305551 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 238

Conread position: 6-386
Cow position: chr24:43814151-43814534 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 107

Conread position: 6-386
Cow position: chr24:44017920-44018303 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 7-259
Cow position: chr24:14333860-14334111 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 100, 71

Conread position: 7-384
Cow position: chr24:12484930-12484550 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 236

Conread position: 11-386
Cow position: chr24:6084463-6084838 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 227

Conread position: 12-327
Cow position: chr24:12796815-12796513 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 140

Conread position: 12-348
Cow position: chr24:1437305-1436978 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 232
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 13, 83

Conread position: 17-194
Cow position: chr24:30900727-30900555 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 61

Conread position: 19-386
Cow position: chr24:6660095-6659723 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 219

Conread position: 26-380
Cow position: chr24:14754594-14754235 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 217

Conread position: 41-386
Cow position: chr24:23505440-23505095 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 166

Conread position: 58-333
Cow position: chr24:35870223-35869957 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 193
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 156, 48

Conread position: 74-386
Cow position: chr24:12110236-12109937 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 225
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 244, 43

Conread position: 84-252
Cow position: chr24:12569329-12569500 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 54

Conread position: 94-381
Cow position: chr24:6059375-6059665 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 120, 96

Conread position: 99-386
Cow position: chr24:6328832-6328541 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 143

Conread position: 100-381
Cow position: chr24:9544545-9544829 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 137

Conread position: 101-374
Cow position: chr24:31006914-31006649 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 184
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 203, 115

Conread position: 116-386
Cow position: chr24:19702004-19702255 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 218, 49

Conread position: 127-386
Cow position: chr24:12700310-12700047 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 110

Conread position: 128-386
Cow position: chr24:12143825-12143569 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 60, 34

Conread position: 166-349
Cow position: chr24:6145957-6146141 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 43, 14

Conread position: 189-386
Cow position: chr24:8030860-8031060 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 161
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 17, 48

Conread position: 189-386
Cow position: chr24:11866903-11866703 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 25, 53

Conread position: 194-386
Cow position: chr24:6435052-6435248 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 154
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 20, 145

Conread position: 240-381
Cow position: chr24:14280479-14280337 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 99

Conread position: 244-386
Cow position: chr24:44325981-44326126 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 74, 94

Conread position: 273-386
Cow position: chr24:21960297-21960181 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 46, 65

Conread position: 640-847
Cow position: chr24:12129306-12129103 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 160
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 644-847
Cow position: chr24:4414769-4414567 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 71, 0

Conread position: 650-847
Cow position: chr24:6406798-6406994 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 650-847
Cow position: chr24:22971861-22972055 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 156
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 65, 0

Conread position: 1-143
Cow position: chr25:33665334-33665193 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 104, 25

Conread position: 1-263
Cow position: chr25:9544407-9544667 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 77

Conread position: 1-335
Cow position: chr25:8675260-8675598 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-341
Cow position: chr25:18889670-18889330 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-342
Cow position: chr25:12942355-12942011 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-347
Cow position: chr25:11932757-11932412 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 181

Conread position: 1-361
Cow position: chr25:18254633-18254280 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 251
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 97, 26

Conread position: 1-376
Cow position: chr25:33244608-33244965 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 43

Conread position: 1-381
Cow position: chr25:13781375-13781759 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr25:18303744-18304119 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 241

Conread position: 1-381
Cow position: chr25:24659598-24659971 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 236

Conread position: 1-381
Cow position: chr25:34346672-34346289 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 92

Conread position: 2-179
Cow position: chr25:18094546-18094722 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 106, 59

Conread position: 2-328
Cow position: chr25:18422373-18422698 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 237
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 108, 80

Conread position: 2-356
Cow position: chr25:16552486-16552133 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 236
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 160

Conread position: 2-377
Cow position: chr25:26879538-26879913 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 24

Conread position: 3-259
Cow position: chr25:17560290-17560034 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 145

Conread position: 4-171
Cow position: chr25:23344552-23344384 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 97, 0

Conread position: 4-349
Cow position: chr25:27365205-27365553 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 244
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 21, 11

Conread position: 5-349
Cow position: chr25:18274633-18274289 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 236

Conread position: 5-380
Cow position: chr25:34014140-34013755 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 341

Conread position: 6-134
Cow position: chr25:35362086-35361957 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 6-346
Cow position: chr25:19917427-19917770 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 232

Conread position: 6-381
Cow position: chr25:18194755-18194378 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 182

Conread position: 6-386
Cow position: chr25:6172246-6172630 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 231

Conread position: 6-386
Cow position: chr25:13550687-13550303 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr25:17589211-17588826 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 238

Conread position: 6-386
Cow position: chr25:32580308-32580685 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 67

Conread position: 17-384
Cow position: chr25:33258021-33258367 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 248
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 56, 0

Conread position: 18-386
Cow position: chr25:27022208-27021854 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 131

Conread position: 25-381
Cow position: chr25:22147907-22148265 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 92

Conread position: 27-333
Cow position: chr25:20775556-20775254 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 211

Conread position: 27-356
Cow position: chr25:12758718-12758395 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 230
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 176, 94

Conread position: 34-381
Cow position: chr25:26279624-26279969 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 203

Conread position: 36-376
Cow position: chr25:40918780-40918440 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 62, 128

Conread position: 39-380
Cow position: chr25:14958468-14958127 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 233
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 262

Conread position: 48-396
Cow position: chr25:18153042-18153386 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 238
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 40, 66

Conread position: 49-386
Cow position: chr25:18175670-18176004 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 63

Conread position: 65-376
Cow position: chr25:39558013-39557708 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 221
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 144, 7

Conread position: 73-381
Cow position: chr25:20630047-20630355 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 165

Conread position: 80-374
Cow position: chr25:8176927-8176634 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 199
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 37

Conread position: 116-346
Cow position: chr25:46206-46436 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 224, 118

Conread position: 145-380
Cow position: chr25:25507190-25507428 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 97

Conread position: 147-386
Cow position: chr25:33664732-33664489 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 98

Conread position: 644-847
Cow position: chr25:22148263-22148465 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr25:26279967-26280169 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr25:34346291-34346089 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 158
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 141, 49

Conread position: 651-846
Cow position: chr25:25507434-25507628 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 155
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 64, 0

Conread position: 1-119
Cow position: chr26:5675525-5675644 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 1-377
Cow position: chr26:17396565-17396173 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 252

Conread position: 1-377
Cow position: chr26:19351148-19350773 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 236

Conread position: 1-381
Cow position: chr26:6849072-6848700 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 25

Conread position: 1-381
Cow position: chr26:9562992-9562609 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 84

Conread position: 1-381
Cow position: chr26:30589007-30588623 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 2-386
Cow position: chr26:4333937-4333550 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 234

Conread position: 6-214
Cow position: chr26:9113102-9113310 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 121
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 99, 149

Conread position: 6-248
Cow position: chr26:11253692-11253450 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 76

Conread position: 6-357
Cow position: chr26:4806197-4805843 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-384
Cow position: chr26:8870246-8870621 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 94

Conread position: 6-386
Cow position: chr26:2198990-2199374 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr26:3030464-3030080 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr26:8919214-8919581 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr26:12588201-12587817 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr26:15144396-15144012 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr26:18852583-18852968 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 233

Conread position: 6-386
Cow position: chr26:30783107-30783491 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-817
Cow position: chr26:18855452-18856265 (view UCSC Genome Browser custom track)
Alignm length: 814
Alignm identity: 157
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 62, 0

Conread position: 7-386
Cow position: chr26:2351995-2351614 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 60

Conread position: 17-374
Cow position: chr26:9844514-9844165 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 105

Conread position: 25-355
Cow position: chr26:16437908-16438224 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 213
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 56

Conread position: 35-308
Cow position: chr26:17680389-17680112 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 188
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 65, 157

Conread position: 35-376
Cow position: chr26:21826286-21825942 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 141

Conread position: 44-336
Cow position: chr26:17996200-17995898 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 207
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 5, 215

Conread position: 644-846
Cow position: chr26:30588625-30588425 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 65, 0

Conread position: 644-847
Cow position: chr26:6848702-6848500 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 71

Conread position: 645-847
Cow position: chr26:17396170-17395969 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 68, 0

Conread position: 649-847
Cow position: chr26:3030082-3029885 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 66, 0

Conread position: 650-847
Cow position: chr26:19350765-19350570 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 157
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 67, 0

Conread position: 650-847
Cow position: chr26:21825939-21825742 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 35

Conread position: 1-312
Cow position: chr27:15277767-15277455 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 160

Conread position: 1-381
Cow position: chr27:893510-893894 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr27:1209654-1210036 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 163

Conread position: 1-381
Cow position: chr27:5911164-5911548 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 236

Conread position: 1-381
Cow position: chr27:9330024-9330408 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 237

Conread position: 1-381
Cow position: chr27:9992900-9992517 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-381
Cow position: chr27:14460154-14459770 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr27:23335466-23335847 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 236

Conread position: 1-420
Cow position: chr27:15638067-15637645 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 72

Conread position: 2-381
Cow position: chr27:28078747-28079124 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 143

Conread position: 4-381
Cow position: chr27:6014101-6014461 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 262
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 263, 80

Conread position: 5-309
Cow position: chr27:3643939-3643630 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 208
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 213

Conread position: 5-386
Cow position: chr27:26555355-26554977 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 22

Conread position: 6-381
Cow position: chr27:25804596-25804236 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 67

Conread position: 6-386
Cow position: chr27:15541630-15542014 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr27:16034093-16033709 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr27:27752895-27752525 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 161

Conread position: 18-381
Cow position: chr27:16612599-16612237 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 242
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 7, 43

Conread position: 22-249
Cow position: chr27:27663265-27663493 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 216

Conread position: 22-381
Cow position: chr27:15037268-15036907 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 221

Conread position: 22-381
Cow position: chr27:15046493-15046852 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 51

Conread position: 27-214
Cow position: chr27:14660107-14660294 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 17

Conread position: 29-215
Cow position: chr27:28080628-28080808 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 105, 0

Conread position: 33-217
Cow position: chr27:22318080-22318266 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 54, 116

Conread position: 35-274
Cow position: chr27:27498925-27499158 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 63, 22

Conread position: 35-381
Cow position: chr27:26325403-26325753 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 203

Conread position: 48-375
Cow position: chr27:17321669-17321346 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 211
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 146, 33

Conread position: 80-381
Cow position: chr27:15123315-15123614 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 199
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 129

Conread position: 97-381
Cow position: chr27:27196208-27195931 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 117, 67

Conread position: 101-346
Cow position: chr27:17421954-17422193 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 215, 92

Conread position: 224-382
Cow position: chr27:1139111-1139271 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 93, 17

Conread position: 226-386
Cow position: chr27:11095330-11095492 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 92, 15

Conread position: 257-381
Cow position: chr27:27663525-27663652 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 63, 82

Conread position: 644-793
Cow position: chr27:893892-894040 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 64, 0

Conread position: 644-847
Cow position: chr27:3234858-3234661 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 106, 0

Conread position: 644-847
Cow position: chr27:15036909-15036710 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr27:26325751-26325953 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 71, 0

Conread position: 652-847
Cow position: chr27:9992511-9992320 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 154
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 63, 0

Conread position: 652-847
Cow position: chr27:15636661-15636467 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 153
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 63, 0

Conread position: 1-143
Cow position: chr28:14705324-14705181 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 121
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 104, 0

Conread position: 1-160
Cow position: chr28:10617480-10617322 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 104, 34

Conread position: 1-235
Cow position: chr28:29820081-29820316 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 218

Conread position: 1-266
Cow position: chr28:10581638-10581371 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-293
Cow position: chr28:2083941-2084229 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 78

Conread position: 1-332
Cow position: chr28:34594326-34594660 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 72

Conread position: 1-351
Cow position: chr28:5751358-5751009 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 166

Conread position: 1-352
Cow position: chr28:5813356-5813712 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 241

Conread position: 1-361
Cow position: chr28:2988893-2988533 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 21

Conread position: 1-365
Cow position: chr28:10497668-10497312 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 106

Conread position: 1-377
Cow position: chr28:1814520-1814142 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 105

Conread position: 1-377
Cow position: chr28:5937823-5938206 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 134

Conread position: 1-377
Cow position: chr28:7002337-7002718 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 0

Conread position: 1-380
Cow position: chr28:12150650-12151030 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 243

Conread position: 1-381
Cow position: chr28:1167535-1167151 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-381
Cow position: chr28:1505212-1505595 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr28:5113951-5113570 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr28:12409881-12409500 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-381
Cow position: chr28:17388830-17389208 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 116

Conread position: 1-381
Cow position: chr28:22260804-22260426 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 237

Conread position: 1-381
Cow position: chr28:26425904-26425525 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-381
Cow position: chr28:32792033-32791649 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 163

Conread position: 1-381
Cow position: chr28:33252659-33253029 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 116

Conread position: 1-384
Cow position: chr28:24667957-24668347 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 78

Conread position: 1-386
Cow position: chr28:5566492-5566885 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 241

Conread position: 2-235
Cow position: chr28:14913864-14914099 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 102, 131

Conread position: 2-276
Cow position: chr28:6656173-6655890 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 41

Conread position: 2-365
Cow position: chr28:5798095-5798453 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 10

Conread position: 5-268
Cow position: chr28:3020399-3020139 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 143

Conread position: 5-318
Cow position: chr28:31140434-31140120 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 210
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 10, 51

Conread position: 5-347
Cow position: chr28:782744-783087 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 158

Conread position: 5-377
Cow position: chr28:7740830-7741193 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 232

Conread position: 5-381
Cow position: chr28:3191895-3191525 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 74

Conread position: 5-381
Cow position: chr28:7789600-7789221 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 74

Conread position: 5-381
Cow position: chr28:13460320-13460699 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 177

Conread position: 5-381
Cow position: chr28:17666947-17666576 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 112

Conread position: 5-385
Cow position: chr28:10071635-10072005 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 68

Conread position: 5-386
Cow position: chr28:1387053-1386670 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 148

Conread position: 6-126
Cow position: chr28:21359690-21359811 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 6-250
Cow position: chr28:485217-484972 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-300
Cow position: chr28:5801346-5801640 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 206
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 92, 73

Conread position: 6-327
Cow position: chr28:10229870-10229555 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 220
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 63, 178

Conread position: 6-386
Cow position: chr28:1953475-1953861 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 234

Conread position: 6-386
Cow position: chr28:2724577-2724193 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr28:6538916-6538533 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr28:6779991-6779608 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr28:22233054-22232673 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-387
Cow position: chr28:7822603-7822988 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-387
Cow position: chr28:14750892-14751273 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 61

Conread position: 13-378
Cow position: chr28:10647026-10646677 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 247
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 92, 13

Conread position: 16-257
Cow position: chr28:8720937-8720694 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 223

Conread position: 18-202
Cow position: chr28:24588447-24588634 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 68, 0

Conread position: 18-384
Cow position: chr28:24589209-24589581 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 222

Conread position: 22-381
Cow position: chr28:18520078-18519719 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 115

Conread position: 27-386
Cow position: chr28:14195320-14194960 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 252
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 170

Conread position: 29-217
Cow position: chr28:24704874-24705057 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 178, 81

Conread position: 35-364
Cow position: chr28:33259022-33259346 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 217
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 209, 78

Conread position: 39-353
Cow position: chr28:26489686-26490001 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 220
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 62, 198

Conread position: 41-325
Cow position: chr28:18100836-18100556 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 189
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 101, 167

Conread position: 41-345
Cow position: chr28:24304616-24304319 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 200
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 104, 66

Conread position: 42-384
Cow position: chr28:5765150-5765482 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 31

Conread position: 44-216
Cow position: chr28:7882008-7881836 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 140
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 61, 80

Conread position: 61-215
Cow position: chr28:7880929-7881084 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 89-377
Cow position: chr28:8379268-8379559 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 148

Conread position: 91-333
Cow position: chr28:7810937-7811165 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 111, 78

Conread position: 117-386
Cow position: chr28:21359939-21360211 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 125

Conread position: 128-356
Cow position: chr28:29455011-29454783 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 70, 98

Conread position: 146-381
Cow position: chr28:14704897-14704662 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 25

Conread position: 154-356
Cow position: chr28:10617291-10617094 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 55, 83

Conread position: 165-386
Cow position: chr28:18147240-18147021 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 152, 37

Conread position: 222-386
Cow position: chr28:29820570-29820736 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 95, 19

Conread position: 232-381
Cow position: chr28:32330168-32330018 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 9, 108

Conread position: 257-386
Cow position: chr28:7881843-7881715 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 109, 26

Conread position: 265-386
Cow position: chr28:17732450-17732326 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 73

Conread position: 273-386
Cow position: chr28:8720331-8720220 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 96, 42

Conread position: 640-843
Cow position: chr28:10071995-10072196 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 640-844
Cow position: chr28:25169354-25169154 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 66, 81

Conread position: 640-847
Cow position: chr28:3019998-3019792 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 640-847
Cow position: chr28:7789227-7789025 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 160
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 73, 0

Conread position: 640-847
Cow position: chr28:33253023-33253229 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 162
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 75, 0

Conread position: 644-839
Cow position: chr28:12409502-12409311 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr28:783400-783598 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr28:1167153-1166951 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 161
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 111, 65

Conread position: 644-847
Cow position: chr28:17666578-17666381 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr28:32791651-32791450 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 99, 0

Conread position: 645-847
Cow position: chr28:5938209-5938410 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 159
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 70, 0

Conread position: 650-847
Cow position: chr28:8379786-8379981 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 157
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 65, 0

Conread position: 651-844
Cow position: chr28:10646670-10646477 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 153
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 54, 63

Conread position: 1-206
Cow position: chr29:42650578-42650785 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-225
Cow position: chr29:410212-409988 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 27

Conread position: 1-249
Cow position: chr29:6266188-6265938 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 136

Conread position: 1-335
Cow position: chr29:42802438-42802776 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 242

Conread position: 1-358
Cow position: chr29:802613-802264 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 42

Conread position: 1-375
Cow position: chr29:15949237-15948872 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 262
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 104, 78

Conread position: 1-376
Cow position: chr29:9961599-9961972 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 259
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 75

Conread position: 1-377
Cow position: chr29:45460029-45460408 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 25

Conread position: 1-381
Cow position: chr29:2100158-2100541 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr29:2690213-2690597 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr29:2841060-2840687 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 69

Conread position: 1-381
Cow position: chr29:7430906-7430527 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-381
Cow position: chr29:10647938-10647560 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr29:10823656-10823283 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 160

Conread position: 1-381
Cow position: chr29:16022843-16023229 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 239

Conread position: 1-381
Cow position: chr29:21426717-21426330 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-381
Cow position: chr29:25932230-25931847 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 181

Conread position: 1-381
Cow position: chr29:26164510-26164136 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 242

Conread position: 1-381
Cow position: chr29:34799497-34799114 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr29:40502671-40502287 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-381
Cow position: chr29:43322867-43323250 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 74

Conread position: 1-381
Cow position: chr29:45587055-45586671 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 238

Conread position: 1-384
Cow position: chr29:14085822-14085436 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 181

Conread position: 1-386
Cow position: chr29:39079398-39079010 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 127

Conread position: 1-396
Cow position: chr29:32540123-32540515 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 78

Conread position: 2-248
Cow position: chr29:6212839-6213097 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 191
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 18, 189

Conread position: 2-381
Cow position: chr29:5957917-5958293 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 20

Conread position: 4-384
Cow position: chr29:5982400-5982018 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 25

Conread position: 5-312
Cow position: chr29:19653425-19653740 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 68

Conread position: 5-355
Cow position: chr29:23976157-23976504 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 70

Conread position: 5-381
Cow position: chr29:19622931-19622552 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 233

Conread position: 5-381
Cow position: chr29:20251475-20251855 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 233

Conread position: 5-381
Cow position: chr29:38227296-38227669 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 233

Conread position: 5-386
Cow position: chr29:9643441-9643066 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 74

Conread position: 6-318
Cow position: chr29:16110727-16111041 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 63

Conread position: 6-343
Cow position: chr29:7844642-7844982 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-343
Cow position: chr29:13582379-13582714 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 162

Conread position: 6-376
Cow position: chr29:16016460-16016091 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 29

Conread position: 6-384
Cow position: chr29:610301-609922 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 112

Conread position: 6-386
Cow position: chr29:669746-669363 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 170

Conread position: 6-386
Cow position: chr29:15894539-15894155 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr29:15968550-15968166 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 233

Conread position: 6-386
Cow position: chr29:18856632-18856249 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 155

Conread position: 6-386
Cow position: chr29:27250031-27249648 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 61

Conread position: 6-386
Cow position: chr29:27980608-27980230 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 20

Conread position: 6-386
Cow position: chr29:31181726-31182099 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 73

Conread position: 6-386
Cow position: chr29:34925790-34926173 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 160

Conread position: 6-386
Cow position: chr29:35297180-35297548 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 233

Conread position: 6-387
Cow position: chr29:19885381-19885763 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 94

Conread position: 12-268
Cow position: chr29:2950945-2950692 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 27, 83

Conread position: 12-380
Cow position: chr29:105350-105725 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 233

Conread position: 13-381
Cow position: chr29:14586241-14586613 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 10

Conread position: 21-226
Cow position: chr29:9854176-9853961 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 103, 169

Conread position: 22-381
Cow position: chr29:48139-47777 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 216

Conread position: 22-381
Cow position: chr29:35263038-35263383 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 255
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 99, 17

Conread position: 23-332
Cow position: chr29:21459617-21459937 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 224
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 36, 31

Conread position: 27-381
Cow position: chr29:19597916-19597564 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 241
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 20, 8

Conread position: 42-380
Cow position: chr29:9619770-9620112 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 31

Conread position: 58-256
Cow position: chr29:3045996-3046193 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 151, 120

Conread position: 70-381
Cow position: chr29:7856885-7857193 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 214
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 26, 46

Conread position: 73-364
Cow position: chr29:251152-251450 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 167

Conread position: 104-331
Cow position: chr29:7086989-7087216 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 153
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 212, 97

Conread position: 127-386
Cow position: chr29:32559322-32559059 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 115

Conread position: 152-387
Cow position: chr29:24336321-24336091 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 164, 73

Conread position: 167-365
Cow position: chr29:16173854-16173656 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 47, 75

Conread position: 181-381
Cow position: chr29:32803929-32804130 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 56

Conread position: 252-381
Cow position: chr29:6265716-6265584 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 68, 87

Conread position: 273-386
Cow position: chr29:8664104-8664219 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 47, 66

Conread position: 273-386
Cow position: chr29:15785381-15785265 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 65

Conread position: 634-847
Cow position: chr29:14210890-14210678 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 11, 76

Conread position: 635-846
Cow position: chr29:10647572-10647357 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 10, 81

Conread position: 640-833
Cow position: chr29:2949652-2949469 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 11, 80

Conread position: 640-847
Cow position: chr29:6265590-6265384 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 158
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 75, 0

Conread position: 640-847
Cow position: chr29:41367001-41366799 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 77, 0

Conread position: 644-771
Cow position: chr29:16344928-16345054 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 69, 0

Conread position: 644-797
Cow position: chr29:38654959-38654807 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 71, 0

Conread position: 644-841
Cow position: chr29:38227667-38227863 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 156
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 71, 0

Conread position: 644-846
Cow position: chr29:26164138-26163937 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 159
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 71, 0

Conread position: 644-846
Cow position: chr29:40502289-40502088 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 160
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr29:2690595-2690802 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 160
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 120, 71

Conread position: 644-847
Cow position: chr29:2840689-2840487 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr29:7430529-7430328 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 161
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 65, 0

Conread position: 644-847
Cow position: chr29:10823285-10823083 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 73, 0

Conread position: 644-847
Cow position: chr29:14586611-14586811 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 49, 0

Conread position: 644-847
Cow position: chr29:25931849-25931650 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 49, 0

Conread position: 644-847
Cow position: chr29:32540783-32540984 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 161
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr29:35815287-35815085 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 73, 0

Conread position: 645-844
Cow position: chr29:23976813-23977011 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 156
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 70, 0

Conread position: 650-826
Cow position: chr29:2748557-2748383 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 95, 67

Conread position: 650-845
Cow position: chr29:39079011-39078817 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 156
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 65, 0

Conread position: 650-847
Cow position: chr29:2100545-2100739 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 59, 0

Conread position: 650-847
Cow position: chr29:16023233-16023429 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 156
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 59, 0

Conread position: 1-117
Cow position: chr3:2710714-2710597 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 104, 0

Conread position: 1-247
Cow position: chr3:77424035-77424284 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-264
Cow position: chr3:16073962-16074215 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 179
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 51

Conread position: 1-264
Cow position: chr3:19721939-19721671 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 200
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 97, 82

Conread position: 1-267
Cow position: chr3:36881690-36881421 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 245

Conread position: 1-324
Cow position: chr3:5995471-5995150 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 150

Conread position: 1-354
Cow position: chr3:594807-595161 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-356
Cow position: chr3:15178932-15179281 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 33

Conread position: 1-365
Cow position: chr3:23213841-23213480 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 27

Conread position: 1-367
Cow position: chr3:49272260-49271898 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 236

Conread position: 1-374
Cow position: chr3:21259686-21259320 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 256
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 172, 19

Conread position: 1-376
Cow position: chr3:42631650-42632022 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 11

Conread position: 1-376
Cow position: chr3:50011901-50012270 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 83

Conread position: 1-377
Cow position: chr3:57484499-57484122 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 116

Conread position: 1-380
Cow position: chr3:5953956-5953574 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 188

Conread position: 1-381
Cow position: chr3:7481002-7480623 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 116

Conread position: 1-381
Cow position: chr3:10239884-10240266 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 238

Conread position: 1-381
Cow position: chr3:19756728-19756343 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 243

Conread position: 1-381
Cow position: chr3:21182456-21182083 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 11

Conread position: 1-381
Cow position: chr3:23290112-23289728 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 165

Conread position: 1-381
Cow position: chr3:34030668-34030287 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 236

Conread position: 1-381
Cow position: chr3:42432463-42432826 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 226

Conread position: 1-381
Cow position: chr3:48230225-48229856 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 62

Conread position: 1-381
Cow position: chr3:49334015-49334394 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 261
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 116, 88

Conread position: 1-381
Cow position: chr3:49544980-49544601 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 133

Conread position: 1-381
Cow position: chr3:52863905-52863524 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 75

Conread position: 1-381
Cow position: chr3:63003316-63002941 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 84

Conread position: 1-381
Cow position: chr3:66620403-66620789 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 239

Conread position: 1-381
Cow position: chr3:78027179-78026812 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 88

Conread position: 1-382
Cow position: chr3:18811731-18812116 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 14

Conread position: 1-384
Cow position: chr3:49678022-49678411 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 181

Conread position: 1-386
Cow position: chr3:6686038-6686420 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 80

Conread position: 1-386
Cow position: chr3:18463336-18462957 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 34

Conread position: 1-396
Cow position: chr3:18542177-18541782 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 145

Conread position: 2-222
Cow position: chr3:74439528-74439750 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 2-349
Cow position: chr3:6878824-6878496 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 68

Conread position: 2-376
Cow position: chr3:32841793-32841418 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 31

Conread position: 2-378
Cow position: chr3:46502765-46503143 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 238

Conread position: 2-381
Cow position: chr3:2907534-2907164 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 14

Conread position: 2-381
Cow position: chr3:32616771-32616386 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 273
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 96, 37

Conread position: 2-381
Cow position: chr3:53515844-53516220 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 24

Conread position: 2-381
Cow position: chr3:56340195-56339811 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 240

Conread position: 2-386
Cow position: chr3:19939104-19939503 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 179

Conread position: 2-386
Cow position: chr3:58947857-58948227 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 115

Conread position: 4-259
Cow position: chr3:66991324-66991571 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 97, 172

Conread position: 4-264
Cow position: chr3:21304563-21304304 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 34, 27

Conread position: 4-356
Cow position: chr3:31415773-31416113 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 243
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 102, 11

Conread position: 4-362
Cow position: chr3:12679789-12679428 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 251
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 97, 188

Conread position: 4-379
Cow position: chr3:83233003-83232636 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 95

Conread position: 4-381
Cow position: chr3:42052916-42052538 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 260
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 94, 18

Conread position: 4-381
Cow position: chr3:42995456-42995067 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 268
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 18, 242

Conread position: 4-382
Cow position: chr3:70887368-70887742 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 251
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 43, 190

Conread position: 5-134
Cow position: chr3:48060596-48060466 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 108
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 97, 0

Conread position: 5-199
Cow position: chr3:24591084-24590898 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 156
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 100, 23

Conread position: 5-203
Cow position: chr3:64357609-64357417 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 161
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 100, 153

Conread position: 5-215
Cow position: chr3:77548952-77549158 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 5-257
Cow position: chr3:70097456-70097709 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 17, 59

Conread position: 5-265
Cow position: chr3:75047563-75047313 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 232, 51

Conread position: 5-377
Cow position: chr3:5883773-5884145 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 39

Conread position: 5-381
Cow position: chr3:30314801-30315169 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 62

Conread position: 5-381
Cow position: chr3:40823621-40823998 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 233

Conread position: 5-381
Cow position: chr3:45774178-45773792 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 260
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 95, 217

Conread position: 5-381
Cow position: chr3:45895323-45894945 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 68

Conread position: 5-381
Cow position: chr3:45974732-45975108 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 68

Conread position: 5-381
Cow position: chr3:49137304-49136933 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 121

Conread position: 5-381
Cow position: chr3:59861600-59861980 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 233

Conread position: 5-381
Cow position: chr3:64017132-64016755 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 21

Conread position: 5-381
Cow position: chr3:72630303-72630681 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 232

Conread position: 5-381
Cow position: chr3:75040935-75040555 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 6-229
Cow position: chr3:7169021-7169247 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 174
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 99, 0

Conread position: 6-317
Cow position: chr3:51940184-51939885 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 227
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 208, 51

Conread position: 6-349
Cow position: chr3:18356268-18355926 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 233

Conread position: 6-358
Cow position: chr3:29331042-29330684 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-359
Cow position: chr3:1516384-1516740 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-365
Cow position: chr3:49613748-49613390 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 239

Conread position: 6-380
Cow position: chr3:46861074-46860697 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-381
Cow position: chr3:32622808-32622437 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 236

Conread position: 6-382
Cow position: chr3:68873526-68873146 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 233

Conread position: 6-386
Cow position: chr3:2917690-2918073 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 55

Conread position: 6-386
Cow position: chr3:3523250-3523632 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 160

Conread position: 6-386
Cow position: chr3:6782613-6782983 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 176

Conread position: 6-386
Cow position: chr3:14439532-14439152 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr3:18859643-18860023 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 68

Conread position: 6-386
Cow position: chr3:19736809-19737193 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 231

Conread position: 6-386
Cow position: chr3:19878886-19879265 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr3:20380772-20381153 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr3:22336117-22336501 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr3:24314696-24315079 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 231

Conread position: 6-386
Cow position: chr3:37625209-37625581 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 269
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 99, 25

Conread position: 6-386
Cow position: chr3:37969277-37969655 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 55

Conread position: 6-386
Cow position: chr3:40339883-40339502 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 236

Conread position: 6-386
Cow position: chr3:41211508-41211123 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 234

Conread position: 6-386
Cow position: chr3:45032970-45033358 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 10

Conread position: 6-386
Cow position: chr3:46679660-46680040 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 183

Conread position: 6-386
Cow position: chr3:50915561-50915944 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 161

Conread position: 6-386
Cow position: chr3:64027857-64027473 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr3:64650855-64651239 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 232

Conread position: 6-386
Cow position: chr3:66890734-66890353 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 233

Conread position: 6-386
Cow position: chr3:68699744-68699353 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 245

Conread position: 7-361
Cow position: chr3:46015877-46016219 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 254
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 142, 34

Conread position: 8-386
Cow position: chr3:36117893-36118274 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 166

Conread position: 10-386
Cow position: chr3:47081176-47080801 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 8

Conread position: 12-381
Cow position: chr3:4737738-4737368 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 152

Conread position: 13-257
Cow position: chr3:4027987-4028224 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 93, 48

Conread position: 13-337
Cow position: chr3:48842407-48842729 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 225

Conread position: 15-354
Cow position: chr3:67528595-67528921 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 224
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 75, 47

Conread position: 20-381
Cow position: chr3:29578876-29579231 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 224

Conread position: 26-340
Cow position: chr3:51137483-51137782 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 209
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 215, 44

Conread position: 27-376
Cow position: chr3:52654613-52654278 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 241
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 195, 89

Conread position: 27-381
Cow position: chr3:20870474-20870099 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 247
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 73, 251

Conread position: 27-386
Cow position: chr3:27918685-27919047 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 177

Conread position: 30-342
Cow position: chr3:16888788-16888478 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 218
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 31, 38

Conread position: 32-386
Cow position: chr3:7158461-7158114 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 206

Conread position: 34-305
Cow position: chr3:3054939-3055198 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 65, 0

Conread position: 42-259
Cow position: chr3:54341989-54341775 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 40, 110

Conread position: 44-343
Cow position: chr3:43415423-43415730 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 221
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 55, 115

Conread position: 48-365
Cow position: chr3:46347747-46347448 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 222
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 132, 51

Conread position: 65-386
Cow position: chr3:51242660-51242983 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 173

Conread position: 71-296
Cow position: chr3:60208311-60208086 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 37, 164

Conread position: 87-328
Cow position: chr3:38493566-38493806 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 143
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 127, 65

Conread position: 87-386
Cow position: chr3:47177966-47177661 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 95-377
Cow position: chr3:2710546-2710267 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 147

Conread position: 99-356
Cow position: chr3:80304845-80305104 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 171
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 174, 169

Conread position: 99-381
Cow position: chr3:52861812-52862083 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 30

Conread position: 99-386
Cow position: chr3:4286121-4286411 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 138

Conread position: 116-381
Cow position: chr3:83294546-83294279 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 98, 42

Conread position: 125-381
Cow position: chr3:66367548-66367816 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 86, 112

Conread position: 127-381
Cow position: chr3:48059078-48058820 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 115

Conread position: 129-280
Cow position: chr3:56322023-56322174 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 77, 108

Conread position: 129-351
Cow position: chr3:19944610-19944824 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 174
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 80, 102

Conread position: 157-384
Cow position: chr3:64357406-64357181 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 32, 82

Conread position: 166-381
Cow position: chr3:19890208-19889992 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 42, 69

Conread position: 194-384
Cow position: chr3:24589584-24589398 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 169, 21

Conread position: 195-386
Cow position: chr3:19800759-19800565 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 155
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 19, 43

Conread position: 219-386
Cow position: chr3:7169656-7169819 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 147, 23

Conread position: 238-381
Cow position: chr3:42447566-42447713 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 123
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 19, 102

Conread position: 240-386
Cow position: chr3:13967547-13967398 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 80, 98

Conread position: 254-381
Cow position: chr3:4028365-4028492 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 47, 34

Conread position: 634-847
Cow position: chr3:23289741-23289529 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 168
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 11, 82

Conread position: 640-817
Cow position: chr3:68873153-68872978 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 641-847
Cow position: chr3:18812109-18812311 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 74, 0

Conread position: 642-847
Cow position: chr3:64357188-64356989 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 75, 0

Conread position: 644-793
Cow position: chr3:49136935-49136787 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 131, 71

Conread position: 644-838
Cow position: chr3:72630679-72630872 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 75, 0

Conread position: 644-845
Cow position: chr3:75040557-75040357 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr3:7480625-7480423 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr3:30315167-30315366 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 65, 0

Conread position: 644-847
Cow position: chr3:49544603-49544404 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 160
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 114, 49

Conread position: 644-847
Cow position: chr3:64016757-64016558 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 161
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 49, 0

Conread position: 644-847
Cow position: chr3:78026814-78026614 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 71, 0

Conread position: 649-847
Cow position: chr3:47177663-47177467 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 66, 0

Conread position: 650-847
Cow position: chr3:40824001-40824194 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 65, 0

Conread position: 660-847
Cow position: chr3:48058735-48058549 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 661-847
Cow position: chr3:5953558-5953375 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 52, 0

Conread position: 1-215
Cow position: chr4:12587334-12587549 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-256
Cow position: chr4:21256383-21256640 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 177

Conread position: 1-271
Cow position: chr4:33493860-33494133 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-335
Cow position: chr4:41120339-41120689 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-358
Cow position: chr4:47254964-47254621 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 253
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 187, 72

Conread position: 1-359
Cow position: chr4:17926219-17925857 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 240

Conread position: 1-365
Cow position: chr4:43319611-43319244 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 238

Conread position: 1-365
Cow position: chr4:45049263-45048896 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-366
Cow position: chr4:11111386-11111023 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 47

Conread position: 1-377
Cow position: chr4:18516931-18517307 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 137

Conread position: 1-381
Cow position: chr4:355944-356322 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 136

Conread position: 1-381
Cow position: chr4:12241182-12240796 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 241

Conread position: 1-381
Cow position: chr4:26886825-26886442 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 17

Conread position: 1-381
Cow position: chr4:31669307-31669688 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr4:36896403-36896785 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr4:43881144-43881518 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-386
Cow position: chr4:6490329-6489945 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 159

Conread position: 1-386
Cow position: chr4:46664549-46664939 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 239

Conread position: 1-388
Cow position: chr4:48026432-48026822 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 243

Conread position: 1-401
Cow position: chr4:44725119-44725523 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 237

Conread position: 2-364
Cow position: chr4:6211886-6211514 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 254
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 33, 162

Conread position: 2-381
Cow position: chr4:11837604-11837234 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 265
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 20, 53

Conread position: 2-381
Cow position: chr4:25599465-25599083 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 59

Conread position: 2-381
Cow position: chr4:51043215-51042840 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 10

Conread position: 2-386
Cow position: chr4:60264122-60263745 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 28

Conread position: 4-376
Cow position: chr4:54158684-54159038 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 263
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 25, 76

Conread position: 4-387
Cow position: chr4:4176829-4177208 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 260
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 94, 75

Conread position: 5-328
Cow position: chr4:28831381-28831692 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 14

Conread position: 5-338
Cow position: chr4:44925479-44925149 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 226
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 20, 153

Conread position: 5-350
Cow position: chr4:9423403-9423065 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 222
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 103, 17

Conread position: 5-377
Cow position: chr4:16359921-16360287 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 233

Conread position: 5-381
Cow position: chr4:31565265-31564891 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 123

Conread position: 6-114
Cow position: chr4:158549-158658 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 6-179
Cow position: chr4:27333468-27333642 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 99, 0

Conread position: 6-183
Cow position: chr4:65223500-65223322 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 99, 0

Conread position: 6-293
Cow position: chr4:19093459-19093746 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 200
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 7, 69

Conread position: 6-324
Cow position: chr4:9354742-9354424 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-325
Cow position: chr4:6268598-6268274 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 237

Conread position: 6-357
Cow position: chr4:14821508-14821165 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 72

Conread position: 6-386
Cow position: chr4:100900-100516 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr4:1930590-1930211 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 84

Conread position: 6-386
Cow position: chr4:3125829-3126209 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr4:4416115-4416492 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 122

Conread position: 6-386
Cow position: chr4:5880199-5880583 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 222

Conread position: 6-386
Cow position: chr4:13548063-13548446 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 108

Conread position: 6-386
Cow position: chr4:16056635-16057017 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 76

Conread position: 6-386
Cow position: chr4:16326741-16326357 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr4:18190439-18190812 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr4:18424491-18424108 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr4:32212201-32212585 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr4:41954508-41954888 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 19

Conread position: 6-386
Cow position: chr4:41958163-41958543 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 19

Conread position: 13-380
Cow position: chr4:33072780-33072409 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 230

Conread position: 14-343
Cow position: chr4:64984396-64984717 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 220
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 93, 67

Conread position: 21-365
Cow position: chr4:27295463-27295111 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 248
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 85, 229

Conread position: 22-381
Cow position: chr4:13493365-13493731 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 219

Conread position: 23-381
Cow position: chr4:61694456-61694118 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 22

Conread position: 35-229
Cow position: chr4:12607601-12607407 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 154
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 174, 81

Conread position: 41-381
Cow position: chr4:57984056-57984400 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 197

Conread position: 93-381
Cow position: chr4:29531753-29531467 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 144

Conread position: 99-381
Cow position: chr4:62568561-62568845 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 133

Conread position: 106-386
Cow position: chr4:529533-529817 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 132

Conread position: 112-386
Cow position: chr4:159296-159575 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 124

Conread position: 117-386
Cow position: chr4:27301300-27301051 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 249, 27

Conread position: 128-381
Cow position: chr4:41332869-41333125 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 159
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 60, 115

Conread position: 166-386
Cow position: chr4:27333903-27334129 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 175
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 40, 71

Conread position: 197-386
Cow position: chr4:603246-603432 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 152
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 128, 44

Conread position: 210-381
Cow position: chr4:58689847-58689680 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 226-381
Cow position: chr4:12587593-12587750 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 94, 16

Conread position: 240-386
Cow position: chr4:17093596-17093448 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 69

Conread position: 634-845
Cow position: chr4:41333112-41333317 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 11, 82

Conread position: 635-847
Cow position: chr4:58689691-58689480 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 74, 0

Conread position: 636-847
Cow position: chr4:1049859-1049652 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 9, 78

Conread position: 638-847
Cow position: chr4:43319240-43319030 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 639-847
Cow position: chr4:6206002-6206207 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 76, 0

Conread position: 640-847
Cow position: chr4:11110867-11110652 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 62, 0

Conread position: 640-847
Cow position: chr4:43881512-43881718 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 158
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 75, 0

Conread position: 640-847
Cow position: chr4:64853843-64853640 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 161
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 113, 0

Conread position: 644-844
Cow position: chr4:46664932-46665127 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 644-847
Cow position: chr4:356320-356522 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 58, 66

Conread position: 644-847
Cow position: chr4:25599085-25598884 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr4:31564893-31564696 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr4:36896783-36896985 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 161
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 71, 0

Conread position: 650-846
Cow position: chr4:44726013-44726208 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 154
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 65, 0

Conread position: 650-847
Cow position: chr4:33072404-33072208 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 155
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 65, 0

Conread position: 660-809
Cow position: chr4:14820941-14820795 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 147, 57

Conread position: 1-143
Cow position: chr5:32946004-32946147 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 104, 0

Conread position: 1-229
Cow position: chr5:49119150-49118922 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 181

Conread position: 1-331
Cow position: chr5:46660172-46660489 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 32

Conread position: 1-333
Cow position: chr5:5667930-5667600 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 225
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 25, 207

Conread position: 1-352
Cow position: chr5:39246883-39246529 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 240

Conread position: 1-357
Cow position: chr5:41528630-41528276 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-377
Cow position: chr5:34696731-34697107 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 170

Conread position: 1-381
Cow position: chr5:415592-415209 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 164

Conread position: 1-381
Cow position: chr5:2914578-2914957 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 150

Conread position: 1-381
Cow position: chr5:3503976-3503608 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 238

Conread position: 1-381
Cow position: chr5:10918951-10919333 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 23

Conread position: 1-381
Cow position: chr5:30579452-30579835 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 42

Conread position: 1-381
Cow position: chr5:37732476-37732859 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 240

Conread position: 1-381
Cow position: chr5:46738449-46738066 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 236

Conread position: 1-381
Cow position: chr5:54792505-54792129 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 42

Conread position: 1-381
Cow position: chr5:55628116-55628499 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 89

Conread position: 1-381
Cow position: chr5:64781888-64781507 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 238

Conread position: 1-381
Cow position: chr5:73489431-73489050 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 236

Conread position: 1-383
Cow position: chr5:29435443-29435090 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 263
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 104, 127

Conread position: 1-386
Cow position: chr5:31101497-31101112 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 217

Conread position: 1-386
Cow position: chr5:57482416-57482026 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 78

Conread position: 2-323
Cow position: chr5:41957198-41956891 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 226
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 186, 129

Conread position: 2-332
Cow position: chr5:27002164-27002487 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 76

Conread position: 2-357
Cow position: chr5:14785249-14784879 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 178

Conread position: 2-381
Cow position: chr5:4385373-4385751 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 155

Conread position: 2-381
Cow position: chr5:7273955-7274339 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 59

Conread position: 2-381
Cow position: chr5:23228797-23229194 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 283
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 67, 175

Conread position: 2-381
Cow position: chr5:35525946-35526314 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 265
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 92, 22

Conread position: 2-381
Cow position: chr5:43003230-43003599 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 260
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 88, 15

Conread position: 2-387
Cow position: chr5:24588887-24589277 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 256
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 77

Conread position: 5-206
Cow position: chr5:6155087-6154885 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 5-240
Cow position: chr5:56857055-56856817 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 102, 0

Conread position: 5-381
Cow position: chr5:14345575-14345196 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 259
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 17, 59

Conread position: 6-201
Cow position: chr5:24577043-24577238 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 99, 57

Conread position: 6-222
Cow position: chr5:26079092-26078874 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 6-228
Cow position: chr5:59482382-59482607 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 98, 0

Conread position: 6-283
Cow position: chr5:31706702-31706981 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 6-307
Cow position: chr5:54932090-54931789 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 147

Conread position: 6-346
Cow position: chr5:10843291-10842949 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 234

Conread position: 6-359
Cow position: chr5:46644813-46645162 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 23

Conread position: 6-376
Cow position: chr5:10482976-10483349 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-385
Cow position: chr5:46664131-46664503 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 169

Conread position: 6-386
Cow position: chr5:3964580-3964961 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 73

Conread position: 6-386
Cow position: chr5:4019070-4018688 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 231

Conread position: 6-386
Cow position: chr5:4089199-4089583 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr5:6588892-6588509 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 141

Conread position: 6-386
Cow position: chr5:10776136-10775755 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr5:18122340-18121964 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 46

Conread position: 6-386
Cow position: chr5:18666122-18666506 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 169

Conread position: 6-386
Cow position: chr5:23960187-23959803 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr5:27909144-27908760 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr5:44459611-44459995 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr5:46776207-46776591 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr5:59060746-59061126 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-387
Cow position: chr5:14380277-14380655 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 67

Conread position: 6-387
Cow position: chr5:32772610-32773003 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 180

Conread position: 8-365
Cow position: chr5:28023648-28024009 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 255
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 90, 32

Conread position: 8-365
Cow position: chr5:48468149-48467790 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 230

Conread position: 8-375
Cow position: chr5:51770813-51770446 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 219

Conread position: 9-381
Cow position: chr5:24098805-24099180 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 162

Conread position: 10-381
Cow position: chr5:3786064-3786430 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 227

Conread position: 12-377
Cow position: chr5:4069355-4069724 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 226

Conread position: 12-386
Cow position: chr5:12643585-12643207 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 231

Conread position: 13-323
Cow position: chr5:33186623-33186932 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 210
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 66, 125

Conread position: 13-385
Cow position: chr5:48808591-48808227 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 16

Conread position: 21-386
Cow position: chr5:35300242-35300611 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 217

Conread position: 22-386
Cow position: chr5:53625744-53625378 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 89

Conread position: 23-335
Cow position: chr5:49074056-49073753 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 203
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 292, 52

Conread position: 28-381
Cow position: chr5:68470589-68470229 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 244
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 79, 113

Conread position: 35-386
Cow position: chr5:41555450-41555109 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 84

Conread position: 36-260
Cow position: chr5:47074469-47074692 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 43

Conread position: 39-367
Cow position: chr5:26084411-26084090 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 5

Conread position: 44-227
Cow position: chr5:59144537-59144723 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 61, 0

Conread position: 44-386
Cow position: chr5:18663958-18664304 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 131

Conread position: 63-386
Cow position: chr5:2531445-2531767 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 176

Conread position: 64-386
Cow position: chr5:241388-241714 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 174

Conread position: 88-381
Cow position: chr5:18115638-18115341 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 17, 43

Conread position: 90-384
Cow position: chr5:58196245-58196534 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 27

Conread position: 98-271
Cow position: chr5:29761781-29761946 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 111, 75

Conread position: 111-381
Cow position: chr5:41465273-41465537 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 94, 126

Conread position: 111-386
Cow position: chr5:28011889-28012168 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 126

Conread position: 111-386
Cow position: chr5:45700554-45700827 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 131

Conread position: 116-386
Cow position: chr5:47830828-47830559 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 65

Conread position: 116-386
Cow position: chr5:49591852-49591582 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 207
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 26, 126

Conread position: 127-386
Cow position: chr5:46807562-46807824 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 110

Conread position: 129-265
Cow position: chr5:32946410-32946546 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 108

Conread position: 131-386
Cow position: chr5:41961465-41961211 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 198
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 78, 106

Conread position: 148-386
Cow position: chr5:4757893-4757651 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 95

Conread position: 151-312
Cow position: chr5:26343276-26343436 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 59, 24

Conread position: 152-381
Cow position: chr5:1341756-1341524 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 91

Conread position: 157-356
Cow position: chr5:69384383-69384584 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 139
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 59, 85

Conread position: 157-386
Cow position: chr5:45181864-45181632 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 85

Conread position: 161-381
Cow position: chr5:35525040-35525263 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 55, 37

Conread position: 166-381
Cow position: chr5:24999574-24999359 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 43, 71

Conread position: 178-386
Cow position: chr5:11625065-11624855 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 165
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 25, 64

Conread position: 196-381
Cow position: chr5:6154859-6154673 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 125, 21

Conread position: 197-386
Cow position: chr5:42505324-42505516 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 17, 45

Conread position: 200-386
Cow position: chr5:38073356-38073544 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 118, 41

Conread position: 208-386
Cow position: chr5:44784581-44784401 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 111, 33

Conread position: 256-384
Cow position: chr5:29766268-29766399 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 83

Conread position: 263-381
Cow position: chr5:29457122-29457240 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 103, 73

Conread position: 273-386
Cow position: chr5:26078800-26078684 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 45, 65

Conread position: 619-847
Cow position: chr5:32308908-32308686 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 178
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 38, 15

Conread position: 640-846
Cow position: chr5:41961222-41961018 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 640-847
Cow position: chr5:41528273-41528066 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 74

Conread position: 644-825
Cow position: chr5:415211-415032 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 143
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 73, 0

Conread position: 644-830
Cow position: chr5:45181639-45181454 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 146
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 71, 0

Conread position: 644-846
Cow position: chr5:2914955-2915156 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 644-846
Cow position: chr5:3503610-3503411 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 65, 0

Conread position: 644-847
Cow position: chr5:3786428-3786627 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 52, 70

Conread position: 644-847
Cow position: chr5:10919331-10919534 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 162
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 135, 73

Conread position: 644-847
Cow position: chr5:54792131-54791927 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 141, 71

Conread position: 644-847
Cow position: chr5:57482033-57481831 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr5:64781509-64781308 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 71, 0

Conread position: 660-847
Cow position: chr5:46629667-46629478 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 99, 40

Conread position: 661-847
Cow position: chr5:30579852-30580037 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 150
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 54, 0

Conread position: 1-114
Cow position: chr6:702222-702336 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 1-170
Cow position: chr6:4508154-4507984 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 100, 0

Conread position: 1-244
Cow position: chr6:3544755-3545002 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 104, 177

Conread position: 1-268
Cow position: chr6:8021197-8021452 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 100, 150

Conread position: 1-284
Cow position: chr6:8202009-8202292 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 66

Conread position: 1-292
Cow position: chr6:2887439-2887744 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 250

Conread position: 1-295
Cow position: chr6:25214526-25214821 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 241

Conread position: 1-295
Cow position: chr6:55544055-55543759 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 243

Conread position: 1-335
Cow position: chr6:15477175-15477510 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 18

Conread position: 1-342
Cow position: chr6:40554309-40553970 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 258
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 207, 78

Conread position: 1-347
Cow position: chr6:15280284-15279942 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 115

Conread position: 1-349
Cow position: chr6:3277679-3277340 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 61

Conread position: 1-357
Cow position: chr6:44550823-44550474 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 206

Conread position: 1-361
Cow position: chr6:30274907-30274549 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-363
Cow position: chr6:64715501-64715861 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-371
Cow position: chr6:36526320-36526690 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-371
Cow position: chr6:40867290-40866922 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-376
Cow position: chr6:30479374-30479750 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 238

Conread position: 1-377
Cow position: chr6:13317233-13316859 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 53

Conread position: 1-379
Cow position: chr6:52693295-52693675 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 188

Conread position: 1-381
Cow position: chr6:15140912-15140533 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 115

Conread position: 1-381
Cow position: chr6:17046325-17046709 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 241

Conread position: 1-381
Cow position: chr6:27529735-27529356 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 17

Conread position: 1-381
Cow position: chr6:28105582-28105206 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 53

Conread position: 1-381
Cow position: chr6:34892734-34892351 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-381
Cow position: chr6:38900899-38900519 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 69

Conread position: 1-381
Cow position: chr6:47042927-47042549 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-382
Cow position: chr6:65841859-65842233 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 78

Conread position: 1-386
Cow position: chr6:28275248-28275637 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 241

Conread position: 1-387
Cow position: chr6:8761033-8760644 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 166

Conread position: 2-158
Cow position: chr6:43607433-43607274 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 97, 0

Conread position: 2-206
Cow position: chr6:64788595-64788798 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 105, 14

Conread position: 2-220
Cow position: chr6:19337313-19337098 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 96, 16

Conread position: 2-248
Cow position: chr6:33995055-33994808 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 173, 97

Conread position: 2-313
Cow position: chr6:39050951-39050647 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 203
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 103, 16

Conread position: 2-323
Cow position: chr6:58027025-58027342 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 103

Conread position: 2-381
Cow position: chr6:1099909-1099532 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 79

Conread position: 2-381
Cow position: chr6:6566879-6567237 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 135

Conread position: 3-375
Cow position: chr6:31565935-31565553 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 270
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 86, 58

Conread position: 4-365
Cow position: chr6:10631326-10631684 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 245
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 94, 75

Conread position: 5-321
Cow position: chr6:14852308-14851991 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 233

Conread position: 5-381
Cow position: chr6:10643822-10644188 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 232

Conread position: 5-381
Cow position: chr6:20560837-20560458 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 5-381
Cow position: chr6:35876440-35876064 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 233

Conread position: 5-381
Cow position: chr6:51086215-51086594 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 177

Conread position: 5-386
Cow position: chr6:1822357-1821973 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 57

Conread position: 6-134
Cow position: chr6:28491244-28491115 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 99, 0

Conread position: 6-153
Cow position: chr6:58408642-58408494 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 99, 0

Conread position: 6-343
Cow position: chr6:28063606-28063945 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 236

Conread position: 6-350
Cow position: chr6:68027062-68027407 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 42

Conread position: 6-357
Cow position: chr6:39437823-39438170 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 226

Conread position: 6-357
Cow position: chr6:65821856-65821501 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 239

Conread position: 6-361
Cow position: chr6:1411670-1411315 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 24

Conread position: 6-381
Cow position: chr6:29311768-29312147 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr6:331196-330812 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr6:2374971-2375352 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr6:10499454-10499070 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr6:13104328-13104711 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 111

Conread position: 6-386
Cow position: chr6:13847295-13847680 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 235

Conread position: 6-386
Cow position: chr6:13944177-13944561 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr6:16052149-16052534 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 241

Conread position: 6-386
Cow position: chr6:17598009-17597637 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 73

Conread position: 6-386
Cow position: chr6:24323111-24322727 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr6:27169851-27170231 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 183

Conread position: 6-386
Cow position: chr6:39908797-39909181 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr6:40251933-40252314 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 31

Conread position: 6-386
Cow position: chr6:40275358-40275741 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr6:43617985-43618369 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr6:44150286-44149902 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr6:65928240-65928622 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 331

Conread position: 6-386
Cow position: chr6:69221940-69221556 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-387
Cow position: chr6:65914472-65914853 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 35

Conread position: 7-381
Cow position: chr6:3889209-3888832 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 233

Conread position: 8-386
Cow position: chr6:12666041-12665666 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 96

Conread position: 10-381
Cow position: chr6:24239332-24239706 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 190

Conread position: 12-381
Cow position: chr6:5949498-5949125 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 231

Conread position: 12-386
Cow position: chr6:7141193-7140808 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 238

Conread position: 12-386
Cow position: chr6:40315666-40316039 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 224

Conread position: 14-297
Cow position: chr6:25794053-25794335 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 103

Conread position: 15-381
Cow position: chr6:27470883-27471251 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 224

Conread position: 20-381
Cow position: chr6:43793426-43793060 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 117

Conread position: 21-386
Cow position: chr6:44032077-44032446 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 222

Conread position: 22-246
Cow position: chr6:65881198-65881423 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 77, 216

Conread position: 22-377
Cow position: chr6:11724818-11724462 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 68

Conread position: 22-384
Cow position: chr6:66232104-66232465 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 138

Conread position: 23-381
Cow position: chr6:185497-185134 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 67

Conread position: 23-381
Cow position: chr6:7178986-7178621 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 18

Conread position: 27-263
Cow position: chr6:48707845-48707604 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 161
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 17

Conread position: 27-317
Cow position: chr6:28088539-28088256 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 187
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 28-386
Cow position: chr6:26670575-26670212 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 210

Conread position: 31-386
Cow position: chr6:44904790-44905147 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 246
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 31, 82

Conread position: 32-386
Cow position: chr6:38233136-38233487 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 85

Conread position: 37-386
Cow position: chr6:15021526-15021863 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 228
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 148, 62

Conread position: 44-345
Cow position: chr6:40813357-40813054 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 198

Conread position: 68-361
Cow position: chr6:59918738-59918443 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 69

Conread position: 74-386
Cow position: chr6:58600825-58601135 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 88

Conread position: 84-381
Cow position: chr6:65941479-65941176 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 205
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 15, 100

Conread position: 88-332
Cow position: chr6:11274561-11274327 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 185
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 86, 0

Conread position: 90-381
Cow position: chr6:3488063-3487773 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 31

Conread position: 96-384
Cow position: chr6:186109-185817 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 148

Conread position: 99-328
Cow position: chr6:10500664-10500892 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 137, 0

Conread position: 99-381
Cow position: chr6:1382922-1382644 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 173, 59

Conread position: 111-281
Cow position: chr6:26044926-26045096 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 98, 127

Conread position: 113-386
Cow position: chr6:40326302-40326029 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 24

Conread position: 120-386
Cow position: chr6:6475481-6475214 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 32

Conread position: 122-381
Cow position: chr6:51714091-51714349 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 116

Conread position: 127-381
Cow position: chr6:914028-914283 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 110

Conread position: 127-381
Cow position: chr6:40973675-40973927 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 197
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 76, 110

Conread position: 151-373
Cow position: chr6:32330105-32329883 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 63, 37

Conread position: 151-386
Cow position: chr6:28133354-28133594 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 58, 86

Conread position: 151-396
Cow position: chr6:702328-702577 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 92

Conread position: 153-381
Cow position: chr6:48369239-48369457 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 12, 37

Conread position: 190-381
Cow position: chr6:37643663-37643855 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 53

Conread position: 197-386
Cow position: chr6:28491103-28490911 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 154
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 17, 45

Conread position: 208-386
Cow position: chr6:3048792-3048612 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 110, 33

Conread position: 208-386
Cow position: chr6:43999535-43999715 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 115, 33

Conread position: 213-386
Cow position: chr6:28703840-28703671 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 153, 28

Conread position: 252-381
Cow position: chr6:65881729-65881861 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 68, 87

Conread position: 274-386
Cow position: chr6:33271-33386 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 64

Conread position: 640-801
Cow position: chr6:702843-703004 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 131
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 5, 76

Conread position: 640-820
Cow position: chr6:26670223-26670044 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 73, 0

Conread position: 640-847
Cow position: chr6:6475225-6475019 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 640-847
Cow position: chr6:27529362-27529156 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 69, 0

Conread position: 640-847
Cow position: chr6:56043076-56042871 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 160
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 15, 0

Conread position: 644-847
Cow position: chr6:5949127-5948929 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 69, 0

Conread position: 644-847
Cow position: chr6:15140535-15140333 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr6:21973303-21973502 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr6:30274245-30274044 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr6:39334223-39334021 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr6:40866671-40866469 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr6:47042551-47042353 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 71, 0

Conread position: 645-847
Cow position: chr6:51730745-51730945 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 70, 0

Conread position: 650-758
Cow position: chr6:69221557-69221450 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 650-841
Cow position: chr6:55542600-55542406 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 80, 65

Conread position: 1-114
Cow position: chr7:39107558-39107444 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 1-125
Cow position: chr7:55279983-55279858 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 1-181
Cow position: chr7:59683637-59683813 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 93, 0

Conread position: 1-187
Cow position: chr7:54603213-54603399 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 146
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 1-227
Cow position: chr7:19924465-19924235 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-229
Cow position: chr7:38536759-38536989 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-250
Cow position: chr7:67799212-67799462 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-268
Cow position: chr7:4415736-4416002 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 138

Conread position: 1-293
Cow position: chr7:5183767-5184052 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 148

Conread position: 1-323
Cow position: chr7:34149460-34149783 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-342
Cow position: chr7:21985761-21986107 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 239

Conread position: 1-358
Cow position: chr7:1404245-1403876 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 252
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 213, 60

Conread position: 1-367
Cow position: chr7:27560201-27559870 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 255
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 104, 42

Conread position: 1-377
Cow position: chr7:1372290-1371910 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 246

Conread position: 1-377
Cow position: chr7:24808104-24807720 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 269

Conread position: 1-377
Cow position: chr7:55537559-55537184 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 80

Conread position: 1-381
Cow position: chr7:10431057-10430679 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 78

Conread position: 1-381
Cow position: chr7:14139239-14138855 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-381
Cow position: chr7:20305132-20304750 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 273
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 97, 40

Conread position: 1-381
Cow position: chr7:21127301-21126923 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 78

Conread position: 1-381
Cow position: chr7:21234650-21234274 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr7:21929504-21929889 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 40

Conread position: 1-381
Cow position: chr7:33405880-33405501 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr7:34486276-34486654 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr7:45948790-45948410 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 137

Conread position: 1-381
Cow position: chr7:46901719-46901333 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 109

Conread position: 1-381
Cow position: chr7:58377399-58377034 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 272
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 310, 42

Conread position: 1-381
Cow position: chr7:58993953-58994330 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 8

Conread position: 1-386
Cow position: chr7:29470824-29471203 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 20

Conread position: 1-396
Cow position: chr7:446269-445875 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 66

Conread position: 2-205
Cow position: chr7:65338907-65338714 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 2-323
Cow position: chr7:13537221-13536906 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 134

Conread position: 2-356
Cow position: chr7:25250460-25250820 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 2-361
Cow position: chr7:5662732-5663083 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 71

Conread position: 2-361
Cow position: chr7:68232301-68232648 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 46

Conread position: 2-364
Cow position: chr7:54195421-54195074 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 91

Conread position: 2-381
Cow position: chr7:24057798-24058175 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 72

Conread position: 2-381
Cow position: chr7:68908677-68909057 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 233

Conread position: 2-386
Cow position: chr7:994879-995260 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 237

Conread position: 2-386
Cow position: chr7:7294297-7293920 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 268
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 76, 45

Conread position: 2-386
Cow position: chr7:20799090-20798699 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 243

Conread position: 4-301
Cow position: chr7:63951060-63950764 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 113, 219

Conread position: 4-381
Cow position: chr7:26852028-26852415 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 265
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 115, 25

Conread position: 4-381
Cow position: chr7:33072922-33072553 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 235

Conread position: 5-381
Cow position: chr7:8144879-8144499 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 5-381
Cow position: chr7:23836930-23837312 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 169

Conread position: 5-381
Cow position: chr7:27786986-27787374 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 187

Conread position: 5-381
Cow position: chr7:39792120-39792512 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 251

Conread position: 5-381
Cow position: chr7:51014635-51015008 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 30

Conread position: 5-386
Cow position: chr7:48634801-48635182 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 17

Conread position: 6-228
Cow position: chr7:43830665-43830442 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 99, 0

Conread position: 6-316
Cow position: chr7:3234323-3234016 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 197

Conread position: 6-365
Cow position: chr7:60463509-60463871 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr7:16512-16129 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 143

Conread position: 6-386
Cow position: chr7:3300796-3300412 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 233

Conread position: 6-386
Cow position: chr7:6648296-6647913 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 238

Conread position: 6-386
Cow position: chr7:7257553-7257918 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 82

Conread position: 6-386
Cow position: chr7:11446916-11447301 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 233

Conread position: 6-386
Cow position: chr7:20515412-20515032 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr7:21320516-21320900 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr7:25439870-25440254 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr7:61559573-61559957 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr7:61808592-61808976 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 231

Conread position: 6-386
Cow position: chr7:65811207-65811577 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 67

Conread position: 7-386
Cow position: chr7:1450737-1451102 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 212

Conread position: 8-357
Cow position: chr7:1408075-1407734 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 234
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 46, 19

Conread position: 8-375
Cow position: chr7:27127706-27128062 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 118

Conread position: 11-348
Cow position: chr7:64241419-64241082 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 35

Conread position: 12-259
Cow position: chr7:53991573-53991822 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 61

Conread position: 12-361
Cow position: chr7:29369921-29369574 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 72

Conread position: 13-236
Cow position: chr7:30302957-30303176 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 198, 82

Conread position: 13-381
Cow position: chr7:59679220-59679591 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 71

Conread position: 13-386
Cow position: chr7:68480927-68481297 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 43

Conread position: 14-386
Cow position: chr7:60794934-60794557 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 230

Conread position: 17-380
Cow position: chr7:60460078-60459703 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 266
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 12, 64

Conread position: 22-381
Cow position: chr7:525353-525715 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 217

Conread position: 27-381
Cow position: chr7:68333370-68333723 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 245
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 35, 132

Conread position: 28-263
Cow position: chr7:59137829-59138057 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 13, 120

Conread position: 28-350
Cow position: chr7:11466389-11466074 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 174

Conread position: 30-386
Cow position: chr7:63386124-63386476 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 113

Conread position: 35-381
Cow position: chr7:6489582-6489932 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 202

Conread position: 41-322
Cow position: chr7:21310886-21311160 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 209
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 67, 35

Conread position: 41-358
Cow position: chr7:68085561-68085877 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 222
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 173, 200

Conread position: 53-351
Cow position: chr7:67428339-67428648 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 25

Conread position: 54-381
Cow position: chr7:38397225-38397554 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 155

Conread position: 57-387
Cow position: chr7:21853411-21853086 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 227
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 46, 33

Conread position: 84-380
Cow position: chr7:39555018-39554722 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 85-385
Cow position: chr7:3155683-3155991 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 157

Conread position: 86-258
Cow position: chr7:1610619-1610452 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 89

Conread position: 87-386
Cow position: chr7:27101852-27101550 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 158

Conread position: 95-377
Cow position: chr7:54644027-54643754 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 200
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 32, 55

Conread position: 113-386
Cow position: chr7:67675585-67675859 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 17

Conread position: 123-386
Cow position: chr7:545325-545587 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 171
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 116, 65

Conread position: 148-386
Cow position: chr7:33312409-33312169 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 89

Conread position: 151-362
Cow position: chr7:5309786-5309585 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 52, 86

Conread position: 172-376
Cow position: chr7:15810949-15810743 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 166
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 42, 22

Conread position: 240-381
Cow position: chr7:61578050-61578194 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 79, 99

Conread position: 277-381
Cow position: chr7:59683821-59683925 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 89, 59

Conread position: 636-835
Cow position: chr7:21986155-21986356 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 17, 82

Conread position: 640-798
Cow position: chr7:25440243-25440400 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 73, 0

Conread position: 640-845
Cow position: chr7:61578188-61578392 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 75, 0

Conread position: 640-847
Cow position: chr7:57564357-57564158 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 66, 0

Conread position: 644-845
Cow position: chr7:445603-445406 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 71, 0

Conread position: 644-846
Cow position: chr7:13533173-13532962 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 74, 0

Conread position: 644-846
Cow position: chr7:33405503-33405302 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 644-847
Cow position: chr7:14138857-14138657 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 38, 0

Conread position: 644-847
Cow position: chr7:34486652-34486855 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 160
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 59, 72

Conread position: 644-847
Cow position: chr7:38397552-38397754 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr7:46901335-46901135 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 71, 0

Conread position: 645-846
Cow position: chr7:55537181-55536985 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 155
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 70, 0

Conread position: 650-847
Cow position: chr7:24807712-24807518 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 154
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 65, 0

Conread position: 650-847
Cow position: chr7:29471202-29471399 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 158
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 173, 67

Conread position: 1-136
Cow position: chr8:33430949-33431085 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 113
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 100, 0

Conread position: 1-173
Cow position: chr8:12717516-12717682 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 99, 0

Conread position: 1-212
Cow position: chr8:61034469-61034258 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 32

Conread position: 1-221
Cow position: chr8:51667746-51667524 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-248
Cow position: chr8:12542901-12542661 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 183
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 208, 24

Conread position: 1-335
Cow position: chr8:42164264-42163936 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 235
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 23, 93

Conread position: 1-342
Cow position: chr8:47885571-47885908 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 60

Conread position: 1-364
Cow position: chr8:42468284-42468631 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 78

Conread position: 1-364
Cow position: chr8:58186666-58186303 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 84

Conread position: 1-376
Cow position: chr8:60060929-60061304 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 34

Conread position: 1-377
Cow position: chr8:3856466-3856092 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 244

Conread position: 1-377
Cow position: chr8:8911055-8911431 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 17

Conread position: 1-377
Cow position: chr8:24915793-24915413 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-377
Cow position: chr8:42484461-42484841 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-378
Cow position: chr8:11802369-11802744 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 237

Conread position: 1-380
Cow position: chr8:33588923-33589301 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr8:4686944-4687329 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr8:5016730-5017106 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr8:11832246-11832636 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 243

Conread position: 1-381
Cow position: chr8:14591353-14590975 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 43

Conread position: 1-381
Cow position: chr8:17311568-17311950 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr8:19051025-19051403 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 237

Conread position: 1-381
Cow position: chr8:19330284-19330668 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 236

Conread position: 1-381
Cow position: chr8:23771183-23771564 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr8:25776124-25775740 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 160

Conread position: 1-381
Cow position: chr8:30487841-30487453 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 246

Conread position: 1-381
Cow position: chr8:32319000-32318624 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 78

Conread position: 1-381
Cow position: chr8:36635995-36635615 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 11

Conread position: 1-381
Cow position: chr8:39195668-39195281 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 244

Conread position: 1-381
Cow position: chr8:44244025-44243641 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-381
Cow position: chr8:47661776-47661393 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 239

Conread position: 1-381
Cow position: chr8:50994334-50994702 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 176

Conread position: 1-384
Cow position: chr8:38606650-38606271 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 151

Conread position: 1-384
Cow position: chr8:48786735-48787102 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 278
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 98, 29

Conread position: 1-385
Cow position: chr8:24419658-24419290 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 239

Conread position: 1-386
Cow position: chr8:10743082-10742683 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 349

Conread position: 1-387
Cow position: chr8:42160866-42160493 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 69

Conread position: 2-220
Cow position: chr8:8229231-8229012 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 103, 173

Conread position: 2-312
Cow position: chr8:42658305-42657997 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 225
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 42, 139

Conread position: 2-376
Cow position: chr8:45216342-45216716 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 256
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 80

Conread position: 2-381
Cow position: chr8:2170829-2170446 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 292

Conread position: 2-386
Cow position: chr8:11969730-11969351 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 34

Conread position: 2-386
Cow position: chr8:47074815-47075199 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 71

Conread position: 2-393
Cow position: chr8:45160525-45160123 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 231

Conread position: 3-381
Cow position: chr8:7161442-7161824 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 235

Conread position: 4-313
Cow position: chr8:24874569-24874256 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 209
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 101, 236

Conread position: 4-359
Cow position: chr8:19188778-19189135 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 256
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 95, 80

Conread position: 5-282
Cow position: chr8:47673708-47673982 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 194
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 100, 55

Conread position: 5-377
Cow position: chr8:25522952-25523330 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 163

Conread position: 5-381
Cow position: chr8:12449500-12449880 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 216

Conread position: 5-381
Cow position: chr8:25408276-25408657 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 235

Conread position: 6-172
Cow position: chr8:9275558-9275725 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 72, 124

Conread position: 6-249
Cow position: chr8:45797768-45797524 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 231

Conread position: 6-321
Cow position: chr8:9275729-9276046 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 127

Conread position: 6-350
Cow position: chr8:9612999-9612661 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 233
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 87, 29

Conread position: 6-376
Cow position: chr8:11821866-11822229 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 157

Conread position: 6-384
Cow position: chr8:10748911-10749294 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 74

Conread position: 6-384
Cow position: chr8:21158280-21157915 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 43

Conread position: 6-384
Cow position: chr8:37931638-37932020 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr8:1153761-1153378 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 87

Conread position: 6-386
Cow position: chr8:1319591-1319974 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr8:1348687-1348301 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 131

Conread position: 6-386
Cow position: chr8:2886298-2886680 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 231

Conread position: 6-386
Cow position: chr8:6065221-6064843 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr8:6683994-6684378 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr8:8518036-8517655 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr8:8556601-8556216 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 238

Conread position: 6-386
Cow position: chr8:9735794-9736172 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr8:15711869-15711485 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr8:27578949-27579328 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 48

Conread position: 6-386
Cow position: chr8:30891768-30891384 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 108

Conread position: 6-386
Cow position: chr8:32437533-32437153 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 81

Conread position: 6-386
Cow position: chr8:34348225-34348605 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr8:42419882-42419505 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 20

Conread position: 6-386
Cow position: chr8:46944365-46943976 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 242

Conread position: 6-386
Cow position: chr8:47069258-47068875 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 6

Conread position: 6-387
Cow position: chr8:32631480-32631095 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 8-377
Cow position: chr8:38390922-38391291 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 102

Conread position: 8-381
Cow position: chr8:50930575-50930203 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 230

Conread position: 12-250
Cow position: chr8:44694371-44694609 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 182

Conread position: 13-381
Cow position: chr8:34108403-34108784 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 263
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 98, 60

Conread position: 13-381
Cow position: chr8:49214995-49215368 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 225

Conread position: 15-346
Cow position: chr8:44107037-44107360 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 246
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 90, 26

Conread position: 17-160
Cow position: chr8:45692594-45692450 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 18-386
Cow position: chr8:22571751-22571378 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 221

Conread position: 19-386
Cow position: chr8:8315889-8315533 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 225

Conread position: 22-381
Cow position: chr8:14928315-14927952 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 217

Conread position: 22-381
Cow position: chr8:50288357-50287996 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 220

Conread position: 23-381
Cow position: chr8:8401545-8401188 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 220

Conread position: 28-386
Cow position: chr8:45449049-45449416 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 210

Conread position: 31-386
Cow position: chr8:47361494-47361126 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 250
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 67, 211

Conread position: 35-356
Cow position: chr8:44663100-44662785 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 223
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 130, 202

Conread position: 39-384
Cow position: chr8:41944007-41944360 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 160

Conread position: 41-377
Cow position: chr8:16086935-16087274 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 241
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 64, 37

Conread position: 44-246
Cow position: chr8:19499717-19499512 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 61, 81

Conread position: 44-284
Cow position: chr8:41646134-41645896 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 165, 50

Conread position: 44-386
Cow position: chr8:11762530-11762871 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 69

Conread position: 54-386
Cow position: chr8:44074908-44074585 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 161

Conread position: 84-381
Cow position: chr8:59262295-59261991 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 162

Conread position: 89-356
Cow position: chr8:39834585-39834849 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 180
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 79, 25

Conread position: 89-386
Cow position: chr8:13698550-13698249 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 214
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 11, 141

Conread position: 90-350
Cow position: chr8:58296872-58296602 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 183
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 136, 152

Conread position: 90-381
Cow position: chr8:46050820-46051114 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 99

Conread position: 117-375
Cow position: chr8:8308256-8308517 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 175
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 88, 118

Conread position: 118-386
Cow position: chr8:25376421-25376692 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 124

Conread position: 122-321
Cow position: chr8:46221176-46220975 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 51

Conread position: 131-386
Cow position: chr8:9668572-9668820 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 186, 47

Conread position: 134-381
Cow position: chr8:45183936-45184191 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 171
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 93, 43

Conread position: 145-381
Cow position: chr8:28878408-28878174 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 183
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 69, 97

Conread position: 150-386
Cow position: chr8:45692321-45692088 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 120, 72

Conread position: 152-313
Cow position: chr8:46420291-46420447 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 100, 68

Conread position: 156-386
Cow position: chr8:59141024-59141258 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 32, 87

Conread position: 161-386
Cow position: chr8:56883217-56883433 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 10, 83

Conread position: 177-384
Cow position: chr8:31790856-31790649 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 37, 60

Conread position: 196-386
Cow position: chr8:19590871-19591064 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 7, 46

Conread position: 640-830
Cow position: chr8:47068886-47068703 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 640-847
Cow position: chr8:60061303-60061510 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 5, 74

Conread position: 644-846
Cow position: chr8:25408655-25408856 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 69, 0

Conread position: 644-846
Cow position: chr8:50994700-50994899 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 73, 0

Conread position: 644-847
Cow position: chr8:4687327-4687529 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr8:5017104-5017306 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr8:8401190-8400988 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 65, 0

Conread position: 644-847
Cow position: chr8:14927954-14927752 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr8:25775742-25775548 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 644-847
Cow position: chr8:32318626-32318425 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr8:39195283-39195088 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 65, 0

Conread position: 644-847
Cow position: chr8:47661395-47661193 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 645-842
Cow position: chr8:3856089-3855894 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 155
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 70, 0

Conread position: 645-847
Cow position: chr8:24915410-24915209 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 650-847
Cow position: chr8:11969352-11969156 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 156
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 67, 0

Conread position: 654-847
Cow position: chr8:8315526-8315334 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 63, 0

Conread position: 1-247
Cow position: chr9:1995713-1995469 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 104, 15

Conread position: 1-266
Cow position: chr9:6050848-6050584 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 116

Conread position: 1-310
Cow position: chr9:12121189-12121499 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 202
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 36, 15

Conread position: 1-346
Cow position: chr9:2186165-2186500 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 235
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 70, 82

Conread position: 1-362
Cow position: chr9:3566651-3566277 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 251

Conread position: 1-365
Cow position: chr9:4281974-4282338 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 72

Conread position: 1-365
Cow position: chr9:6830309-6829941 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 78

Conread position: 1-376
Cow position: chr9:1980186-1980561 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 37

Conread position: 1-376
Cow position: chr9:28021998-28022378 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 238

Conread position: 1-377
Cow position: chr9:4532692-4533071 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-377
Cow position: chr9:29028000-29027627 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 38

Conread position: 1-379
Cow position: chr9:60464431-60464059 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 121

Conread position: 1-380
Cow position: chr9:59536296-59536674 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 102

Conread position: 1-381
Cow position: chr9:2171258-2171638 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 128

Conread position: 1-381
Cow position: chr9:5004192-5004553 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 88

Conread position: 1-381
Cow position: chr9:7002983-7003387 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr9:7061893-7061499 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 17

Conread position: 1-381
Cow position: chr9:9013299-9013679 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 109

Conread position: 1-381
Cow position: chr9:16175968-16176350 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 163

Conread position: 1-381
Cow position: chr9:18509602-18509220 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 232

Conread position: 1-381
Cow position: chr9:20308949-20308574 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 117

Conread position: 1-381
Cow position: chr9:22653767-22654151 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr9:30487753-30488151 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 258

Conread position: 1-381
Cow position: chr9:37162612-37162235 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 78

Conread position: 1-381
Cow position: chr9:42309882-42310264 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr9:42569100-42569483 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 237

Conread position: 1-381
Cow position: chr9:51181993-51181607 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 137

Conread position: 1-381
Cow position: chr9:59173959-59173567 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 249

Conread position: 1-381
Cow position: chr9:60277821-60277437 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 72

Conread position: 1-386
Cow position: chr9:28688301-28688687 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 236

Conread position: 2-194
Cow position: chr9:3354485-3354290 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 101, 36

Conread position: 2-351
Cow position: chr9:23816197-23816544 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 228
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 13, 144

Conread position: 2-351
Cow position: chr9:37095729-37096069 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 242
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 73, 29

Conread position: 2-374
Cow position: chr9:9705764-9706121 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 263
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 207, 59

Conread position: 2-381
Cow position: chr9:37971009-37970617 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 347

Conread position: 2-381
Cow position: chr9:47002391-47002774 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 236

Conread position: 2-381
Cow position: chr9:59425970-59426347 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 159

Conread position: 2-386
Cow position: chr9:17064192-17063806 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 241

Conread position: 3-214
Cow position: chr9:6974923-6975135 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 95, 58

Conread position: 4-328
Cow position: chr9:4650912-4650587 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 224
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 22, 26

Conread position: 4-358
Cow position: chr9:42556126-42556483 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 243
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 94, 75

Conread position: 4-364
Cow position: chr9:59511587-59511949 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 233

Conread position: 5-245
Cow position: chr9:25023097-25022858 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 21

Conread position: 5-356
Cow position: chr9:53702520-53702180 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 41, 36

Conread position: 5-356
Cow position: chr9:59444050-59444401 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 150

Conread position: 5-367
Cow position: chr9:13476683-13476316 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 241

Conread position: 5-376
Cow position: chr9:29628543-29628175 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 21

Conread position: 5-381
Cow position: chr9:27034884-27035261 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 227

Conread position: 5-381
Cow position: chr9:47544944-47545316 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 248
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 92, 33

Conread position: 5-381
Cow position: chr9:64119433-64119796 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 94

Conread position: 5-384
Cow position: chr9:3803542-3803931 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 233

Conread position: 5-386
Cow position: chr9:30672571-30672949 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 155

Conread position: 5-386
Cow position: chr9:44818389-44818756 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 28

Conread position: 6-172
Cow position: chr9:163304-163137 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 99, 0

Conread position: 6-202
Cow position: chr9:25484070-25484267 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 159
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 99, 169

Conread position: 6-204
Cow position: chr9:60651513-60651314 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 99, 0

Conread position: 6-228
Cow position: chr9:16268571-16268795 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 6-235
Cow position: chr9:25755024-25754794 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 6-279
Cow position: chr9:49177628-49177354 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-357
Cow position: chr9:1075998-1075649 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 142

Conread position: 6-361
Cow position: chr9:31064632-31064990 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 230

Conread position: 6-384
Cow position: chr9:222327-221947 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 73

Conread position: 6-384
Cow position: chr9:25035646-25035264 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-385
Cow position: chr9:3006045-3005665 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr9:130990-130604 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 233

Conread position: 6-386
Cow position: chr9:780605-780222 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr9:1251795-1251414 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 169

Conread position: 6-386
Cow position: chr9:2487931-2487526 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 288
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 99, 111

Conread position: 6-386
Cow position: chr9:27934288-27934671 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 21

Conread position: 6-386
Cow position: chr9:28440008-28440391 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 173

Conread position: 6-386
Cow position: chr9:30826881-30827260 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 61

Conread position: 6-386
Cow position: chr9:36724701-36725085 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 169

Conread position: 6-386
Cow position: chr9:45873546-45873926 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 82

Conread position: 6-386
Cow position: chr9:51210881-51211265 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr9:64018262-64017879 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 233

Conread position: 6-387
Cow position: chr9:5514632-5515007 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 63

Conread position: 7-386
Cow position: chr9:28678173-28678553 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 231

Conread position: 9-381
Cow position: chr9:1636155-1636526 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 167

Conread position: 10-216
Cow position: chr9:7012920-7013123 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 123, 31

Conread position: 13-215
Cow position: chr9:2500087-2499888 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 139
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 13-386
Cow position: chr9:29328862-29329241 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 63

Conread position: 16-353
Cow position: chr9:3393399-3393063 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 230
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 90, 28

Conread position: 21-382
Cow position: chr9:59455046-59454686 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 185

Conread position: 21-386
Cow position: chr9:50790928-50791295 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 216

Conread position: 22-380
Cow position: chr9:3543060-3543422 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 216

Conread position: 24-375
Cow position: chr9:31807789-31808143 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 17

Conread position: 34-381
Cow position: chr9:10322033-10322383 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 204

Conread position: 41-386
Cow position: chr9:34722150-34722488 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 38

Conread position: 48-381
Cow position: chr9:2053009-2053334 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 241
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 57, 171

Conread position: 57-361
Cow position: chr9:44795528-44795821 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 187

Conread position: 65-386
Cow position: chr9:25187366-25187691 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 25

Conread position: 89-386
Cow position: chr9:43664096-43664387 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 32, 71

Conread position: 90-381
Cow position: chr9:32969234-32969529 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 148

Conread position: 91-357
Cow position: chr9:3763297-3763558 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 118, 147

Conread position: 92-384
Cow position: chr9:14762158-14761874 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 129

Conread position: 96-386
Cow position: chr9:4943518-4943228 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 14

Conread position: 99-373
Cow position: chr9:2205254-2205521 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 110, 36

Conread position: 100-381
Cow position: chr9:6249594-6249878 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 137

Conread position: 101-381
Cow position: chr9:59482503-59482222 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 182
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 113, 69

Conread position: 104-356
Cow position: chr9:828823-828587 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 111, 58

Conread position: 106-333
Cow position: chr9:17070595-17070368 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 13, 76

Conread position: 116-386
Cow position: chr9:3998322-3998595 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 121

Conread position: 124-381
Cow position: chr9:17757293-17757544 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 103, 79

Conread position: 181-381
Cow position: chr9:28653950-28654156 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 33, 62

Conread position: 182-387
Cow position: chr9:2209674-2209875 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 32, 60

Conread position: 190-386
Cow position: chr9:40223673-40223872 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 156
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 12, 46

Conread position: 240-365
Cow position: chr9:25022735-25022608 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 99

Conread position: 638-847
Cow position: chr9:29628176-29627975 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 55, 0

Conread position: 640-847
Cow position: chr9:26083946-26083747 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 160
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 54, 0

Conread position: 640-847
Cow position: chr9:59173573-59173370 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 158
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 68, 0

Conread position: 644-846
Cow position: chr9:32969527-32969727 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 160
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr9:16176348-16176547 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 161
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr9:27035259-27035460 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr9:37162237-37162035 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr9:37970619-37970418 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr9:47002772-47002971 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 56, 0

Conread position: 644-847
Cow position: chr9:51181609-51181407 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr9:60277439-60277237 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 71, 0

Conread position: 645-847
Cow position: chr9:28022381-28022582 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 160
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 72, 0

Conread position: 649-847
Cow position: chr9:3148690-3148493 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 66, 0

Conread position: 653-847
Cow position: chr9:7061496-7061304 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 152
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 62, 0

Conread position: 1-143
Cow position: chrX:18954418-18954275 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 121
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 104, 0

Conread position: 1-185
Cow position: chrX:22488288-22488473 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 150
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 104, 0

Conread position: 1-222
Cow position: chrX:5299117-5298894 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-256
Cow position: chrX:22130143-22129882 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 197
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 37, 199

Conread position: 1-260
Cow position: chrX:24112722-24112467 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 208, 34

Conread position: 1-322
Cow position: chrX:14817057-14817382 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 208
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 15

Conread position: 1-346
Cow position: chrX:17613892-17613555 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 237
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 17, 81

Conread position: 1-348
Cow position: chrX:23391492-23391143 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 241

Conread position: 1-351
Cow position: chrX:26767091-26766747 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 79

Conread position: 1-357
Cow position: chrX:29950484-29950122 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 239

Conread position: 1-360
Cow position: chrX:20696988-20696640 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 38

Conread position: 1-375
Cow position: chrX:18534580-18534944 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 53

Conread position: 1-376
Cow position: chrX:31082074-31082445 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 262
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 90, 182

Conread position: 1-376
Cow position: chrX:31198547-31198926 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-377
Cow position: chrX:23277126-23277503 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 236

Conread position: 1-381
Cow position: chrX:320574-320954 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 21

Conread position: 1-381
Cow position: chrX:2536347-2535965 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 243

Conread position: 1-381
Cow position: chrX:13053132-13053490 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 1-381
Cow position: chrX:13413033-13412648 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 243

Conread position: 1-381
Cow position: chrX:15127135-15126752 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 83

Conread position: 1-381
Cow position: chrX:16699407-16699791 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 235

Conread position: 1-381
Cow position: chrX:17667790-17667398 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 20

Conread position: 1-381
Cow position: chrX:21223035-21223410 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 48

Conread position: 1-381
Cow position: chrX:21829631-21830015 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 235

Conread position: 1-381
Cow position: chrX:29096308-29096690 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chrX:29853462-29853081 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 181

Conread position: 1-381
Cow position: chrX:30232001-30231614 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 26

Conread position: 1-386
Cow position: chrX:12478829-12479196 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 51

Conread position: 1-386
Cow position: chrX:13417321-13416937 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 159

Conread position: 1-386
Cow position: chrX:26427540-26427156 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 204

Conread position: 1-386
Cow position: chrX:29285545-29285929 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 153

Conread position: 1-386
Cow position: chrX:29794012-29793633 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 46

Conread position: 1-386
Cow position: chrX:44387228-44387609 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 153

Conread position: 1-387
Cow position: chrX:23070818-23071192 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 263
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 21, 71

Conread position: 2-345
Cow position: chrX:26758498-26758156 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 10

Conread position: 2-377
Cow position: chrX:2482529-2482150 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 2-380
Cow position: chrX:21058899-21059268 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 111

Conread position: 2-381
Cow position: chrX:4410780-4411163 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 259
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 15, 45

Conread position: 2-381
Cow position: chrX:23019432-23019813 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 61

Conread position: 2-381
Cow position: chrX:23041019-23040638 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 162

Conread position: 2-381
Cow position: chrX:24478966-24478604 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 254
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 103, 28

Conread position: 2-381
Cow position: chrX:40246773-40246395 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 236

Conread position: 2-384
Cow position: chrX:3376011-3375625 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 241

Conread position: 3-264
Cow position: chrX:30367053-30366806 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 102, 67

Conread position: 3-314
Cow position: chrX:23418899-23418584 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 204
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 12, 243

Conread position: 4-381
Cow position: chrX:12458929-12459318 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 69

Conread position: 4-385
Cow position: chrX:6282636-6282265 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 31

Conread position: 4-386
Cow position: chrX:10417194-10416802 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 139

Conread position: 5-265
Cow position: chrX:30183784-30183522 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 68

Conread position: 5-365
Cow position: chrX:6250321-6249969 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 240
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 130, 149

Conread position: 5-381
Cow position: chrX:26528086-26528462 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 109

Conread position: 6-111
Cow position: chrX:16275782-16275887 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-114
Cow position: chrX:982743-982852 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 6-124
Cow position: chrX:507352-507471 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 6-155
Cow position: chrX:8670696-8670846 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 99, 0

Conread position: 6-182
Cow position: chrX:29947812-29947989 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 99, 0

Conread position: 6-193
Cow position: chrX:11433806-11433994 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 99, 0

Conread position: 6-227
Cow position: chrX:8454857-8455081 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 6-231
Cow position: chrX:12669752-12669521 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 174
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 99, 0

Conread position: 6-281
Cow position: chrX:12803759-12803486 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 231

Conread position: 6-284
Cow position: chrX:17478417-17478138 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 172
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 99, 0

Conread position: 6-307
Cow position: chrX:30178883-30178580 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 110

Conread position: 6-314
Cow position: chrX:13398015-13397706 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-322
Cow position: chrX:2101964-2102280 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 132

Conread position: 6-323
Cow position: chrX:28758536-28758210 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 6-346
Cow position: chrX:14594876-14595217 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-355
Cow position: chrX:18219502-18219857 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-357
Cow position: chrX:24089506-24089861 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 158

Conread position: 6-358
Cow position: chrX:3421080-3420730 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 158

Conread position: 6-358
Cow position: chrX:16812490-16812135 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 204

Conread position: 6-361
Cow position: chrX:28562109-28561752 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 136

Conread position: 6-365
Cow position: chrX:5394896-5394534 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 232

Conread position: 6-365
Cow position: chrX:27987737-27987358 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 350

Conread position: 6-366
Cow position: chrX:7030291-7030649 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 130

Conread position: 6-377
Cow position: chrX:30055630-30055255 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 238

Conread position: 6-381
Cow position: chrX:21304421-21304041 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 233

Conread position: 6-384
Cow position: chrX:7093703-7094085 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-384
Cow position: chrX:12343061-12343441 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 126

Conread position: 6-384
Cow position: chrX:22619203-22618812 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-384
Cow position: chrX:27426215-27425833 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-385
Cow position: chrX:15980845-15980469 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chrX:1833932-1834307 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 46

Conread position: 6-386
Cow position: chrX:2562752-2562369 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 237

Conread position: 6-386
Cow position: chrX:2604153-2604536 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chrX:5323618-5323234 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chrX:5336381-5335997 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chrX:5863503-5863883 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 176

Conread position: 6-386
Cow position: chrX:6872968-6872584 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chrX:7481737-7482121 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chrX:8479754-8480139 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 233

Conread position: 6-386
Cow position: chrX:9125460-9125849 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 240

Conread position: 6-386
Cow position: chrX:10531453-10531069 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chrX:11464897-11464513 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chrX:12280165-12279784 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chrX:12353345-12353729 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chrX:13076592-13076208 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 76

Conread position: 6-386
Cow position: chrX:13097166-13096782 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 76

Conread position: 6-386
Cow position: chrX:14786767-14786400 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 39

Conread position: 6-386
Cow position: chrX:15179326-15178936 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 12

Conread position: 6-386
Cow position: chrX:16363019-16362635 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chrX:18659677-18659299 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chrX:20315950-20315573 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 67

Conread position: 6-386
Cow position: chrX:20359946-20359562 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 10

Conread position: 6-386
Cow position: chrX:21340509-21340889 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 170

Conread position: 6-386
Cow position: chrX:21490302-21490674 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chrX:22525499-22525115 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chrX:22611052-22611432 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 189

Conread position: 6-386
Cow position: chrX:26400072-26399692 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 227

Conread position: 6-386
Cow position: chrX:28585085-28585468 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chrX:28634311-28633938 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 230

Conread position: 6-386
Cow position: chrX:29885093-29885481 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 241

Conread position: 6-386
Cow position: chrX:30011144-30011528 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 230

Conread position: 6-386
Cow position: chrX:30173566-30173182 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 238

Conread position: 6-386
Cow position: chrX:31187141-31186735 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 254

Conread position: 6-386
Cow position: chrX:31493525-31493907 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chrX:32067051-32066676 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 96

Conread position: 6-386
Cow position: chrX:35529967-35530351 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chrX:37849120-37849502 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 73

Conread position: 6-386
Cow position: chrX:39563826-39563445 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 236

Conread position: 7-250
Cow position: chrX:30056764-30057011 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 7-345
Cow position: chrX:24484299-24483969 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 82

Conread position: 7-381
Cow position: chrX:970880-971259 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 232

Conread position: 7-386
Cow position: chrX:7752006-7752388 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 230

Conread position: 7-386
Cow position: chrX:8588284-8588667 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 231

Conread position: 7-386
Cow position: chrX:37812267-37812651 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 231

Conread position: 8-386
Cow position: chrX:12654653-12654273 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 180

Conread position: 9-386
Cow position: chrX:11149209-11148847 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 132

Conread position: 14-356
Cow position: chrX:1689674-1689331 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 233
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 93, 5

Conread position: 16-321
Cow position: chrX:16237898-16238204 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 227

Conread position: 17-380
Cow position: chrX:21589089-21589451 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 228

Conread position: 18-386
Cow position: chrX:27960686-27961047 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 52

Conread position: 19-236
Cow position: chrX:5833313-5833094 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 20-377
Cow position: chrX:21579595-21579948 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 114

Conread position: 20-379
Cow position: chrX:19873955-19874299 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 21

Conread position: 21-386
Cow position: chrX:12288274-12287914 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 200

Conread position: 22-382
Cow position: chrX:1547102-1547465 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 216

Conread position: 22-386
Cow position: chrX:9008459-9008824 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 216

Conread position: 23-246
Cow position: chrX:41556259-41556488 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 78, 53

Conread position: 26-254
Cow position: chrX:13084599-13084359 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 162
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 26-381
Cow position: chrX:20720115-20720474 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 212

Conread position: 27-234
Cow position: chrX:33214406-33214618 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 78, 123

Conread position: 27-354
Cow position: chrX:3407688-3407361 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 237
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 73, 211

Conread position: 27-386
Cow position: chrX:22582600-22582248 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 52

Conread position: 27-386
Cow position: chrX:29911299-29910936 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 211

Conread position: 28-314
Cow position: chrX:28553776-28554052 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 56

Conread position: 30-381
Cow position: chrX:29779357-29779013 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 238
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 22, 43

Conread position: 35-288
Cow position: chrX:1942608-1942357 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 191
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 70, 38

Conread position: 39-381
Cow position: chrX:27495062-27495404 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 203

Conread position: 41-384
Cow position: chrX:41851053-41850708 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 197

Conread position: 42-354
Cow position: chrX:17491818-17491506 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 214
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 64, 25

Conread position: 45-377
Cow position: chrX:30711734-30712069 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 193

Conread position: 46-386
Cow position: chrX:507186-506842 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 197

Conread position: 50-381
Cow position: chrX:40734596-40734273 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 228
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 265, 58

Conread position: 53-386
Cow position: chrX:4796462-4796808 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 117

Conread position: 54-386
Cow position: chrX:20797140-20797462 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 227
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 312, 37

Conread position: 55-386
Cow position: chrX:23214199-23213858 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 240
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 50, 24

Conread position: 67-221
Cow position: chrX:22814562-22814718 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 67-386
Cow position: chrX:34553296-34553611 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 67

Conread position: 73-323
Cow position: chrX:28871005-28870756 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 177
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 165

Conread position: 84-381
Cow position: chrX:21269852-21269572 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 213
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 130, 151

Conread position: 88-326
Cow position: chrX:2143902-2144146 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 17, 33

Conread position: 92-357
Cow position: chrX:28651352-28651088 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 145

Conread position: 95-386
Cow position: chrX:17478228-17477936 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 18

Conread position: 97-378
Cow position: chrX:12182924-12183206 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 143

Conread position: 98-386
Cow position: chrX:27624194-27624485 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 138

Conread position: 99-386
Cow position: chrX:982861-983151 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 138

Conread position: 104-333
Cow position: chrX:6242448-6242211 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 100, 71

Conread position: 104-342
Cow position: chrX:30069948-30070189 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 107, 185

Conread position: 113-381
Cow position: chrX:16016210-16015945 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 124

Conread position: 116-386
Cow position: chrX:34345454-34345727 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 92, 121

Conread position: 116-442
Cow position: chrX:41411400-41411730 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 120

Conread position: 127-346
Cow position: chrX:25018434-25018214 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 150
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 89, 101

Conread position: 127-381
Cow position: chrX:15599198-15599449 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 114

Conread position: 128-357
Cow position: chrX:24377269-24377497 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 86, 73

Conread position: 128-381
Cow position: chrX:6884833-6884581 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 53

Conread position: 128-386
Cow position: chrX:16275878-16276138 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 114

Conread position: 130-386
Cow position: chrX:5283547-5283288 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 112

Conread position: 137-381
Cow position: chrX:5652103-5651856 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 189
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 71, 100

Conread position: 148-386
Cow position: chrX:24325327-24325092 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 188
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 66, 94

Conread position: 151-309
Cow position: chrX:18953517-18953359 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 134
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 63, 18

Conread position: 151-381
Cow position: chrX:28627386-28627154 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 182
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 109, 83

Conread position: 151-386
Cow position: chrX:3084869-3084636 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 180
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 63, 91

Conread position: 153-337
Cow position: chrX:33801250-33801440 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 78, 92

Conread position: 155-361
Cow position: chrX:25612022-25612230 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 87

Conread position: 158-365
Cow position: chrX:41888728-41888514 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 56, 78

Conread position: 166-386
Cow position: chrX:29173495-29173274 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 175
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 48, 72

Conread position: 220-386
Cow position: chrX:11422195-11422360 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 139
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 148, 21

Conread position: 221-381
Cow position: chrX:18953359-18953197 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 99, 16

Conread position: 224-381
Cow position: chrX:22488476-22488631 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 17

Conread position: 224-386
Cow position: chrX:12703379-12703215 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 94, 17

Conread position: 227-384
Cow position: chrX:12669412-12669262 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 139, 14

Conread position: 240-381
Cow position: chrX:28758155-28758011 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 80, 98

Conread position: 244-386
Cow position: chrX:30057478-30057621 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 74, 25

Conread position: 254-386
Cow position: chrX:22816205-22816338 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 7

Conread position: 273-386
Cow position: chrX:8963200-8963087 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 93, 60

Conread position: 273-386
Cow position: chrX:29934974-29935090 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 45, 65

Conread position: 277-386
Cow position: chrX:17051269-17051381 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 41, 61

Conread position: 622-847
Cow position: chrX:5304615-5304837 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 29, 0

Conread position: 639-847
Cow position: chrX:20720466-20720679 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 6, 77

Conread position: 640-827
Cow position: chrX:12287925-12287739 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 640-847
Cow position: chrX:6242115-6241910 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 70, 78

Conread position: 640-847
Cow position: chrX:26528456-26528659 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 162
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 75, 0

Conread position: 640-847
Cow position: chrX:31372295-31372497 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 644-820
Cow position: chrX:29096688-29096862 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 17, 0

Conread position: 644-821
Cow position: chrX:21223408-21223584 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 71, 0

Conread position: 644-846
Cow position: chrX:320952-321151 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 46, 0

Conread position: 644-846
Cow position: chrX:26758129-26757929 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 62, 0

Conread position: 644-847
Cow position: chrX:15126754-15126552 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chrX:15599447-15599649 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 65, 0

Conread position: 644-847
Cow position: chrX:18953199-18952997 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 644-847
Cow position: chrX:23390035-23389833 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chrX:29853083-29852881 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chrX:31198932-31199134 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 73, 0

Conread position: 645-846
Cow position: chrX:30712072-30712273 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 73