Cow genome map

Conread name: LyN1-MLN01G020086

Conread position: 1-285
Cow position: chr1:27989657-27989933 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 1-287
Cow position: chr1:22631236-22631521 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 44

Conread position: 1-287
Cow position: chr1:53208588-53208869 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 55

Conread position: 1-287
Cow position: chr1:53366699-53366417 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 91

Conread position: 1-287
Cow position: chr1:53422678-53422391 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 124

Conread position: 1-287
Cow position: chr1:56657480-56657762 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 46

Conread position: 1-287
Cow position: chr1:67185828-67186106 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 1-287
Cow position: chr1:76740076-76740362 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-287
Cow position: chr1:100420374-100420093 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 48

Conread position: 1-287
Cow position: chr1:102322327-102322605 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 44

Conread position: 1-289
Cow position: chr1:76701881-76702163 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 48, 62

Conread position: 5-287
Cow position: chr1:31239453-31239737 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 7-286
Cow position: chr1:14529685-14529964 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 107-289
Cow position: chr1:62803198-62803379 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 148
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 94, 0

Conread position: 1-287
Cow position: chr10:25340944-25340671 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 1-287
Cow position: chr10:36444865-36445141 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 1-290
Cow position: chr10:22344266-22343989 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 8

Conread position: 1-303
Cow position: chr10:32830441-32830142 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 48

Conread position: 1-351
Cow position: chr10:20539115-20538758 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 205, 114

Conread position: 109-286
Cow position: chr10:50198725-50198548 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 119-285
Cow position: chr10:21415527-21415693 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 1-287
Cow position: chr11:35862189-35862475 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 206

Conread position: 1-320
Cow position: chr11:66731582-66731274 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 66

Conread position: 2-287
Cow position: chr11:37069914-37070195 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 7-287
Cow position: chr11:48981444-48981166 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 36

Conread position: 16-287
Cow position: chr11:87137793-87138062 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 65-287
Cow position: chr11:30121271-30121493 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 123-287
Cow position: chr11:1487794-1487957 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 134
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 60, 0

Conread position: 1-286
Cow position: chr13:36347609-36347890 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 28

Conread position: 1-287
Cow position: chr13:669754-669474 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 1-287
Cow position: chr13:3314140-3313855 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 0

Conread position: 1-324
Cow position: chr13:34763475-34763785 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 232
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 288, 56

Conread position: 50-287
Cow position: chr13:15447033-15447261 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 181
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 35, 0

Conread position: 110-286
Cow position: chr13:22214986-22215159 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 68, 0

Conread position: 1-287
Cow position: chr14:17689512-17689225 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 1-290
Cow position: chr14:44236033-44235745 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 1-320
Cow position: chr14:13581215-13580896 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 46

Conread position: 13-288
Cow position: chr14:44554198-44553924 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 109

Conread position: 40-287
Cow position: chr14:46123471-46123231 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 77-287
Cow position: chr14:43563256-43563043 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 91, 105

Conread position: 1-287
Cow position: chr15:13546662-13546946 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 56

Conread position: 1-287
Cow position: chr15:21452329-21452048 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-287
Cow position: chr15:35644064-35644349 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 0

Conread position: 1-287
Cow position: chr15:36623271-36623563 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 61

Conread position: 1-288
Cow position: chr15:16788398-16788678 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 204
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 12, 0

Conread position: 3-287
Cow position: chr15:6330404-6330128 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 60

Conread position: 16-287
Cow position: chr15:47202188-47202459 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 19-285
Cow position: chr15:43292805-43293066 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 196
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 116, 94

Conread position: 53-285
Cow position: chr15:6119746-6119517 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 97

Conread position: 1-287
Cow position: chr16:16230352-16230066 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-287
Cow position: chr16:16267856-16268140 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 1-287
Cow position: chr16:45704753-45705037 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 1-287
Cow position: chr16:51401811-51402096 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 1-322
Cow position: chr16:43771523-43771211 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 47

Conread position: 8-287
Cow position: chr16:5762824-5762537 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 0

Conread position: 8-290
Cow position: chr16:15411020-15411297 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 106-287
Cow position: chr16:193976-194152 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 1-287
Cow position: chr17:1458993-1458713 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 85

Conread position: 1-287
Cow position: chr18:17323224-17322944 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 1-287
Cow position: chr18:23702259-23702545 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-287
Cow position: chr18:23801846-23801560 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-287
Cow position: chr18:5535795-5535532 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 1-287
Cow position: chr19:7490928-7490642 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-287
Cow position: chr19:20126844-20126567 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 40-287
Cow position: chr19:3142435-3142176 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 124-287
Cow position: chr19:39665844-39666007 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 132
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 1-287
Cow position: chr2:194438-194714 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 1-287
Cow position: chr2:12330219-12329941 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 206
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 91, 0

Conread position: 1-287
Cow position: chr2:14900681-14900401 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 1-287
Cow position: chr2:16323960-16323678 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 208
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 129, 28

Conread position: 1-287
Cow position: chr2:24436925-24437210 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 44

Conread position: 1-322
Cow position: chr2:44988130-44988448 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 115

Conread position: 1-324
Cow position: chr2:5997110-5996786 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 148

Conread position: 1-326
Cow position: chr2:54695911-54695583 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 16-287
Cow position: chr2:32456811-32457079 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-287
Cow position: chr20:19244253-19243980 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 50

Conread position: 2-287
Cow position: chr20:12047302-12047020 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 18

Conread position: 29-287
Cow position: chr20:8214239-8214489 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 0

Conread position: 1-287
Cow position: chr21:2538246-2538532 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 218

Conread position: 1-287
Cow position: chr21:4186850-4186564 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 87

Conread position: 1-287
Cow position: chr21:7155233-7154951 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 1-287
Cow position: chr21:26699762-26700047 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 0

Conread position: 1-287
Cow position: chr21:34255688-34255975 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 193

Conread position: 1-305
Cow position: chr21:42119-41820 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 24

Conread position: 16-287
Cow position: chr21:13299728-13299464 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 0

Conread position: 18-287
Cow position: chr21:995551-995811 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 103-285
Cow position: chr21:24298726-24298908 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 16, 22

Conread position: 124-287
Cow position: chr21:15548091-15548256 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 1-286
Cow position: chr22:34604943-34604665 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 9, 32

Conread position: 1-287
Cow position: chr22:13768049-13767770 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 1-287
Cow position: chr22:15355423-15355139 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 229

Conread position: 1-287
Cow position: chr22:35668938-35669220 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 1-287
Cow position: chr22:35904450-35904721 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 47, 0

Conread position: 1-290
Cow position: chr22:3303926-3304212 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 13

Conread position: 29-287
Cow position: chr22:40589106-40588850 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 111-286
Cow position: chr22:23826420-23826245 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 112-290
Cow position: chr22:9731482-9731660 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 113-287
Cow position: chr22:10326730-10326560 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 1-287
Cow position: chr23:1800360-1800078 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 110-287
Cow position: chr23:1339162-1339335 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 1-287
Cow position: chr24:14376838-14377127 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 70

Conread position: 1-287
Cow position: chr24:19467771-19468063 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 177

Conread position: 1-287
Cow position: chr24:36713052-36712780 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 1-287
Cow position: chr24:39680329-39680053 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 209
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 90, 56

Conread position: 1-296
Cow position: chr24:31381232-31380940 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 206

Conread position: 1-286
Cow position: chr25:37647951-37647661 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 1-287
Cow position: chr25:11930031-11930313 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 175

Conread position: 3-285
Cow position: chr25:16923628-16923902 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 44

Conread position: 62-287
Cow position: chr25:9984550-9984331 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 36, 55

Conread position: 1-287
Cow position: chr26:9841638-9841922 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 122

Conread position: 113-287
Cow position: chr26:27988155-27988328 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 142
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 125, 0

Conread position: 121-285
Cow position: chr26:31793156-31792992 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-324
Cow position: chr27:22742684-22742985 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 221
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 288, 61

Conread position: 2-326
Cow position: chr27:27278437-27278118 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 98

Conread position: 1-286
Cow position: chr28:25702143-25702421 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 7-287
Cow position: chr28:21379299-21379019 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 62-287
Cow position: chr28:10616334-10616560 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 0

Conread position: 140-287
Cow position: chr28:10294065-10293918 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-287
Cow position: chr29:107794-107511 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 1-287
Cow position: chr29:13057491-13057206 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 113

Conread position: 1-287
Cow position: chr29:27260378-27260668 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 0

Conread position: 1-296
Cow position: chr29:32642948-32642670 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 43, 115

Conread position: 1-316
Cow position: chr29:32805252-32804941 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 62

Conread position: 2-328
Cow position: chr29:43255668-43255995 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 0

Conread position: 3-287
Cow position: chr29:1217459-1217179 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 61-320
Cow position: chr29:2415397-2415658 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 64

Conread position: 145-287
Cow position: chr29:2745857-2746000 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 1-287
Cow position: chr3:3983293-3983003 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 1-287
Cow position: chr3:25689306-25689018 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 186

Conread position: 1-287
Cow position: chr3:62882016-62881733 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 17

Conread position: 1-287
Cow position: chr3:63689593-63689877 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 40

Conread position: 1-290
Cow position: chr3:29581315-29581029 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 58

Conread position: 1-320
Cow position: chr3:48525394-48525079 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 24

Conread position: 1-322
Cow position: chr3:54655423-54655101 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 42

Conread position: 5-287
Cow position: chr3:61277239-61276960 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 6-287
Cow position: chr3:53048129-53048412 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 88

Conread position: 7-288
Cow position: chr3:58036175-58035899 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 0

Conread position: 7-290
Cow position: chr3:72389613-72389323 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 111-287
Cow position: chr3:61676237-61676067 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 113-286
Cow position: chr3:64812902-64813079 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 96, 0

Conread position: 128-287
Cow position: chr3:84112954-84112796 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 75, 87

Conread position: 1-286
Cow position: chr4:27372544-27372829 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 125

Conread position: 1-287
Cow position: chr4:5486934-5487213 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 1-287
Cow position: chr4:27336404-27336110 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 0

Conread position: 8-287
Cow position: chr4:12606431-12606704 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 28-287
Cow position: chr4:36811759-36811500 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 110-287
Cow position: chr4:43869800-43869625 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 120, 0

Conread position: 1-286
Cow position: chr5:24644311-24644582 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 1-287
Cow position: chr5:3252578-3252867 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 218, 0

Conread position: 3-287
Cow position: chr5:27178204-27177919 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 0

Conread position: 7-286
Cow position: chr5:21221224-21221496 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 191
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 51, 63

Conread position: 76-287
Cow position: chr5:26625720-26625930 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 165
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 56, 45

Conread position: 110-287
Cow position: chr5:40922250-40922419 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 1-287
Cow position: chr6:18986713-18986431 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 127

Conread position: 1-287
Cow position: chr6:38274271-38273983 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 9

Conread position: 1-287
Cow position: chr6:50112785-50112514 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 21

Conread position: 9-287
Cow position: chr6:10646361-10646096 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 20-322
Cow position: chr6:3573462-3573159 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 48

Conread position: 93-287
Cow position: chr6:3685499-3685302 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 155
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 140, 0

Conread position: 1-285
Cow position: chr7:26837195-26836922 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 1-285
Cow position: chr7:42297515-42297782 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 1-286
Cow position: chr7:997981-997712 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 110, 0

Conread position: 1-287
Cow position: chr7:3158087-3157803 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 1-287
Cow position: chr7:31877054-31876774 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 1-287
Cow position: chr7:39531197-39531478 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 150

Conread position: 1-287
Cow position: chr7:48637504-48637225 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 54

Conread position: 1-287
Cow position: chr7:58336233-58336519 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-287
Cow position: chr7:59559592-59559875 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 0

Conread position: 1-329
Cow position: chr7:67431328-67431019 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 237
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 296, 56

Conread position: 6-287
Cow position: chr7:56823593-56823312 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 159

Conread position: 7-287
Cow position: chr7:42872901-42872627 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 185

Conread position: 8-287
Cow position: chr7:63924926-63925196 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 53-287
Cow position: chr7:49071263-49071505 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 88-287
Cow position: chr7:58920652-58920452 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 112, 0

Conread position: 1-285
Cow position: chr8:30417602-30417323 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 1-286
Cow position: chr8:52861224-52860940 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 91

Conread position: 1-287
Cow position: chr8:1116611-1116891 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 6-287
Cow position: chr8:47675807-47675528 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 60

Conread position: 11-319
Cow position: chr8:51062166-51062475 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 18

Conread position: 77-287
Cow position: chr8:9537612-9537822 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 119-320
Cow position: chr8:1934831-1935034 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 170, 0

Conread position: 124-326
Cow position: chr8:56507644-56507847 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 168, 12

Conread position: 1-287
Cow position: chr9:3806223-3805934 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 52

Conread position: 1-287
Cow position: chr9:20780518-20780246 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 49, 0

Conread position: 1-287
Cow position: chr9:22320079-22320363 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 1-287
Cow position: chr9:26054674-26054389 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 166

Conread position: 2-285
Cow position: chr9:64005817-64006099 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 120

Conread position: 27-287
Cow position: chr9:1983418-1983158 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 38-287
Cow position: chr9:26081732-26081980 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 189
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 76, 133

Conread position: 115-287
Cow position: chr9:13473267-13473439 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 1-286
Cow position: chrX:22818609-22818326 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 0

Conread position: 1-286
Cow position: chrX:26442713-26442998 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 156

Conread position: 1-287
Cow position: chrX:32328744-32328463 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0