Cow genome map


           Conread name:
           Lym1-jns23_A07.f
        

               Conread position:
               1-336
               

               Cow position:
               chr1:63316063-63316412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               32, 48
               

               Conread position:
               1-341
               

               Cow position:
               chr1:84601793-84602165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               256
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               1-358
               

               Cow position:
               chr1:32954646-32955009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               1-501
               

               Cow position:
               chr1:42727846-42728363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               531
               

               Alignm identity:
               358
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               32, 195
               

               Conread position:
               1-503
               

               Cow position:
               chr1:97100185-97100689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               523
               

               Alignm identity:
               347
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               30, 61
               

               Conread position:
               3-497
               

               Cow position:
               chr1:12678644-12678156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               510
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 51
               

               Conread position:
               53-357
               

               Cow position:
               chr1:43285127-43285453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               38, 186
               

               Conread position:
               65-376
               

               Cow position:
               chr1:30882262-30882578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               23, 87
               

               Conread position:
               86-371
               

               Cow position:
               chr1:67406675-67406388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               66, 77
               

               Conread position:
               90-359
               

               Cow position:
               chr1:71938487-71938757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               60, 8
               

               Conread position:
               96-378
               

               Cow position:
               chr1:55146819-55146536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               98, 21
               

               Conread position:
               97-502
               

               Cow position:
               chr1:2765433-2765029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               16, 96
               

               Conread position:
               112-373
               

               Cow position:
               chr1:30413596-30413325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               39, 11
               

               Conread position:
               112-503
               

               Cow position:
               chr1:14560941-14561319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               271
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               40, 5
               

               Conread position:
               115-375
               

               Cow position:
               chr1:31399219-31399488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               15, 70
               

               Conread position:
               121-353
               

               Cow position:
               chr1:58882017-58882250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               64, 20
               

               Conread position:
               123-502
               

               Cow position:
               chr1:56748583-56748199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               262
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               71, 19
               

               Conread position:
               124-383
               

               Cow position:
               chr1:97619843-97620110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               24, 93
               

               Conread position:
               127-502
               

               Cow position:
               chr1:29379692-29380051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               145, 28
               

               Conread position:
               128-367
               

               Cow position:
               chr1:23624153-23623905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               16, 28
               

               Conread position:
               130-503
               

               Cow position:
               chr1:56643603-56644000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               274
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               15, 20
               

               Conread position:
               133-359
               

               Cow position:
               chr1:52819289-52819071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               143, 43
               

               Conread position:
               133-373
               

               Cow position:
               chr1:20422222-20422467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               56, 110
               

               Conread position:
               137-359
               

               Cow position:
               chr1:71136128-71135907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               69, 81
               

               Conread position:
               138-502
               

               Cow position:
               chr1:22777567-22777955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               260
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               69, 344
               

               Conread position:
               140-359
               

               Cow position:
               chr1:92048803-92048589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               128, 16
               

               Conread position:
               141-373
               

               Cow position:
               chr1:99136457-99136690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               54, 15
               

               Conread position:
               142-358
               

               Cow position:
               chr1:64099291-64099508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               13, 7
               

               Conread position:
               142-369
               

               Cow position:
               chr1:67014357-67014128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               13, 35
               

               Conread position:
               142-387
               

               Cow position:
               chr1:45535679-45535428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               52, 197
               

               Conread position:
               142-503
               

               Cow position:
               chr1:50634427-50634779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               69, 226
               

               Conread position:
               143-376
               

               Cow position:
               chr1:86614836-86614603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               14, 74
               

               Conread position:
               144-348
               

               Cow position:
               chr1:73522176-73522379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               11, 5
               

               Conread position:
               144-357
               

               Cow position:
               chr1:51836542-51836327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               50, 137
               

               Conread position:
               145-503
               

               Cow position:
               chr1:29901004-29901354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               216, 49
               

               Conread position:
               146-489
               

               Cow position:
               chr1:74947153-74947499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               245
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               60, 48
               

               Conread position:
               155-358
               

               Cow position:
               chr1:19440060-19440263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               82, 26
               

               Conread position:
               155-359
               

               Cow position:
               chr1:6322165-6321963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               92, 35
               

               Conread position:
               155-385
               

               Cow position:
               chr1:49131155-49131394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               65, 40
               

               Conread position:
               155-441
               

               Cow position:
               chr1:31871386-31871084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               155-482
               

               Cow position:
               chr1:80764577-80764899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               122, 71
               

               Conread position:
               155-493
               

               Cow position:
               chr1:23099860-23099523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               235
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               39, 260
               

               Conread position:
               155-502
               

               Cow position:
               chr1:5162088-5162431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               250
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               50, 139
               

               Conread position:
               156-346
               

               Cow position:
               chr1:53410956-53411143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               81, 16
               

               Conread position:
               156-357
               

               Cow position:
               chr1:70282896-70282691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               156-358
               

               Cow position:
               chr1:6881266-6881470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               47, 20
               

               Conread position:
               156-499
               

               Cow position:
               chr1:55202664-55202997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               245
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               270, 64
               

               Conread position:
               156-502
               

               Cow position:
               chr1:95765130-95765493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 39
               

               Conread position:
               157-369
               

               Cow position:
               chr1:58889336-58889551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               34, 180
               

               Conread position:
               161-503
               

               Cow position:
               chr1:54162852-54163203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               237
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               45, 132
               

               Conread position:
               162-358
               

               Cow position:
               chr1:90640976-90640780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               110, 9
               

               Conread position:
               163-471
               

               Cow position:
               chr1:71331599-71331908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               36, 8
               

               Conread position:
               163-503
               

               Cow position:
               chr1:57635405-57635055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               114, 9
               

               Conread position:
               164-500
               

               Cow position:
               chr1:98655766-98656081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               12, 56
               

               Conread position:
               167-357
               

               Cow position:
               chr1:69249232-69249044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               36, 12
               

               Conread position:
               167-358
               

               Cow position:
               chr1:44506917-44506722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               27, 152
               

               Conread position:
               167-359
               

               Cow position:
               chr1:86325659-86325857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               27, 88
               

               Conread position:
               167-482
               

               Cow position:
               chr1:27145701-27146018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               27, 175
               

               Conread position:
               169-356
               

               Cow position:
               chr1:82406606-82406796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               74, 26
               

               Conread position:
               169-359
               

               Cow position:
               chr1:13056581-13056774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               39, 171
               

               Conread position:
               169-373
               

               Cow position:
               chr1:71748063-71748267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               108, 16
               

               Conread position:
               181-358
               

               Cow position:
               chr1:61534436-61534612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               95, 39
               

               Conread position:
               182-359
               

               Cow position:
               chr1:22467862-22467684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               17, 45
               

               Conread position:
               186-359
               

               Cow position:
               chr1:635119-634945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               188-353
               

               Cow position:
               chr1:34892493-34892328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               35, 147
               

               Conread position:
               188-472
               

               Cow position:
               chr1:12871082-12871357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               6, 63
               

               Conread position:
               188-502
               

               Cow position:
               chr1:38401716-38401423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               173, 15
               

               Conread position:
               188-502
               

               Cow position:
               chr1:63905544-63905864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               227
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               6, 63
               

               Conread position:
               188-502
               

               Cow position:
               chr1:86020135-86020456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 15
               

               Conread position:
               190-502
               

               Cow position:
               chr1:7731655-7731338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               30, 100
               

               Conread position:
               190-503
               

               Cow position:
               chr1:72791106-72790774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               86, 146
               

               Conread position:
               193-502
               

               Cow position:
               chr1:78794816-78795120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               50, 23
               

               Conread position:
               194-371
               

               Cow position:
               chr1:59557646-59557464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               200-370
               

               Cow position:
               chr1:7583637-7583466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               201-454
               

               Cow position:
               chr1:75833758-75834022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               202-358
               

               Cow position:
               chr1:81371758-81371917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 119
               

               Conread position:
               202-401
               

               Cow position:
               chr1:65103547-65103347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               81, 12
               

               Conread position:
               203-359
               

               Cow position:
               chr1:39418213-39418364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               203-403
               

               Cow position:
               chr1:74084287-74084479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               203-407
               

               Cow position:
               chr1:81868818-81869021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               74, 13
               

               Conread position:
               204-381
               

               Cow position:
               chr1:2659148-2658966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               25, 58
               

               Conread position:
               207-377
               

               Cow position:
               chr1:91450423-91450249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               69, 9
               

               Conread position:
               208-341
               

               Cow position:
               chr1:52863111-52863246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               208-358
               

               Cow position:
               chr1:86709109-86709262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               208-397
               

               Cow position:
               chr1:52774616-52774805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               68, 17
               

               Conread position:
               208-502
               

               Cow position:
               chr1:3872758-3872470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               9, 192
               

               Conread position:
               209-502
               

               Cow position:
               chr1:84226470-84226765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               26, 88
               

               Conread position:
               212-358
               

               Cow position:
               chr1:46218483-46218338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               217-375
               

               Cow position:
               chr1:85410239-85410402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               10, 115
               

               Conread position:
               217-377
               

               Cow position:
               chr1:99691052-99690891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               59, 11
               

               Conread position:
               217-380
               

               Cow position:
               chr1:39718915-39718745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               217-502
               

               Cow position:
               chr1:15028577-15028310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               59, 70
               

               Conread position:
               218-375
               

               Cow position:
               chr1:56408513-56408351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               218-390
               

               Cow position:
               chr1:61736996-61736826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               74, 81
               

               Conread position:
               220-468
               

               Cow position:
               chr1:74532397-74532648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               47, 121
               

               Conread position:
               221-367
               

               Cow position:
               chr1:33441825-33441973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               221-381
               

               Cow position:
               chr1:57646571-57646413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               22, 116
               

               Conread position:
               221-501
               

               Cow position:
               chr1:80973721-80973989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               55, 173
               

               Conread position:
               221-502
               

               Cow position:
               chr1:98613134-98612844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               55, 116
               

               Conread position:
               222-383
               

               Cow position:
               chr1:75744752-75744590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               222-390
               

               Cow position:
               chr1:3661162-3661333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               223-371
               

               Cow position:
               chr1:42887374-42887521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               54, 47
               

               Conread position:
               228-503
               

               Cow position:
               chr1:86364642-86364360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               44, 88
               

               Conread position:
               230-498
               

               Cow position:
               chr1:66828545-66828272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               143, 106
               

               Conread position:
               236-374
               

               Cow position:
               chr1:41092989-41093131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               31, 105
               

               Conread position:
               237-383
               

               Cow position:
               chr1:76170160-76170011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               242-516
               

               Cow position:
               chr1:31123001-31123269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               232, 91
               

               Conread position:
               246-502
               

               Cow position:
               chr1:98023526-98023793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               249-503
               

               Cow position:
               chr1:22388337-22388599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               27, 112
               

               Conread position:
               255-501
               

               Cow position:
               chr1:10881678-10881412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               256-528
               

               Cow position:
               chr1:7202387-7202123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               20, 71
               

               Conread position:
               261-511
               

               Cow position:
               chr1:15956591-15956323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               16, 262
               

               Conread position:
               275-401
               

               Cow position:
               chr1:79915081-79914956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               276-480
               

               Cow position:
               chr1:93810278-93810068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               85, 71
               

               Conread position:
               279-499
               

               Cow position:
               chr1:6166086-6165862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               312-497
               

               Cow position:
               chr1:32072264-32072468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               334-503
               

               Cow position:
               chr1:98348760-98348942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               26, 120
               

               Conread position:
               343-501
               

               Cow position:
               chr1:30665104-30664944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               48, 60
               

               Conread position:
               1-154
               

               Cow position:
               chr10:43890065-43889910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               30, 54
               

               Conread position:
               1-493
               

               Cow position:
               chr10:28450606-28451126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               524
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               2-348
               

               Cow position:
               chr10:58601775-58601423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 51
               

               Conread position:
               8-222
               

               Cow position:
               chr10:22441137-22441356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 49
               

               Conread position:
               85-379
               

               Cow position:
               chr10:29010023-29010308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               93, 64
               

               Conread position:
               86-503
               

               Cow position:
               chr10:6568232-6567816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               49, 18
               

               Conread position:
               92-500
               

               Cow position:
               chr10:42118714-42118289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               290
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               15, 30
               

               Conread position:
               96-502
               

               Cow position:
               chr10:38014357-38013963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               275
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               17, 51
               

               Conread position:
               112-359
               

               Cow position:
               chr10:11032519-11032774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               12, 216
               

               Conread position:
               115-503
               

               Cow position:
               chr10:59675637-59676023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 58
               

               Conread position:
               121-366
               

               Cow position:
               chr10:49680014-49679761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               68, 28
               

               Conread position:
               123-399
               

               Cow position:
               chr10:1351901-1351618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               215
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               11, 28
               

               Conread position:
               129-372
               

               Cow position:
               chr10:31400940-31401188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               65, 17
               

               Conread position:
               132-503
               

               Cow position:
               chr10:24786059-24785696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               73, 177
               

               Conread position:
               133-359
               

               Cow position:
               chr10:45113954-45113729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               61, 22
               

               Conread position:
               133-373
               

               Cow position:
               chr10:28933696-28933451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               12, 120
               

               Conread position:
               133-457
               

               Cow position:
               chr10:16432351-16432693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 21
               

               Conread position:
               140-373
               

               Cow position:
               chr10:22786842-22786610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               41, 20
               

               Conread position:
               141-503
               

               Cow position:
               chr10:65734890-65734523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               16, 59
               

               Conread position:
               142-410
               

               Cow position:
               chr10:58259574-58259843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               35, 80
               

               Conread position:
               142-468
               

               Cow position:
               chr10:35857111-35857436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               52, 177
               

               Conread position:
               142-482
               

               Cow position:
               chr10:15618865-15619196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               249
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               52, 60
               

               Conread position:
               143-358
               

               Cow position:
               chr10:35802426-35802645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               143-359
               

               Cow position:
               chr10:4994622-4994832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               133, 52
               

               Conread position:
               143-373
               

               Cow position:
               chr10:52569534-52569304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               51, 175
               

               Conread position:
               147-373
               

               Cow position:
               chr10:32503379-32503160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               17, 25
               

               Conread position:
               149-359
               

               Cow position:
               chr10:64300426-64300634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               67, 19
               

               Conread position:
               154-388
               

               Cow position:
               chr10:52296426-52296192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               113, 45
               

               Conread position:
               154-393
               

               Cow position:
               chr10:57457267-57457021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               154-482
               

               Cow position:
               chr10:22652632-22652293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 177
               

               Conread position:
               155-359
               

               Cow position:
               chr10:2394536-2394739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               72, 46
               

               Conread position:
               155-367
               

               Cow position:
               chr10:62516811-62516590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               155-379
               

               Cow position:
               chr10:55012071-55011843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               58, 108
               

               Conread position:
               155-380
               

               Cow position:
               chr10:9341802-9342036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               155-471
               

               Cow position:
               chr10:41984958-41985263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               51, 227
               

               Conread position:
               155-503
               

               Cow position:
               chr10:23948991-23949326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               32, 88
               

               Conread position:
               155-504
               

               Cow position:
               chr10:65791762-65791409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               34, 41
               

               Conread position:
               156-370
               

               Cow position:
               chr10:22843611-22843395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               111, 34
               

               Conread position:
               156-424
               

               Cow position:
               chr10:39314641-39314374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               47, 86
               

               Conread position:
               156-502
               

               Cow position:
               chr10:22905834-22906198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               251
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               38, 103
               

               Conread position:
               156-517
               

               Cow position:
               chr10:7366856-7367211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               56, 178
               

               Conread position:
               162-353
               

               Cow position:
               chr10:10124260-10124073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               114, 10
               

               Conread position:
               162-373
               

               Cow position:
               chr10:35767167-35767369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               162-397
               

               Cow position:
               chr10:20505454-20505227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               114, 9
               

               Conread position:
               163-359
               

               Cow position:
               chr10:4502572-4502379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               104, 37
               

               Conread position:
               164-471
               

               Cow position:
               chr10:8206717-8207018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               8, 42
               

               Conread position:
               167-502
               

               Cow position:
               chr10:51779119-51779443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               27, 54
               

               Conread position:
               171-410
               

               Cow position:
               chr10:39244994-39245234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               7, 45
               

               Conread position:
               173-503
               

               Cow position:
               chr10:3317824-3317487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               20, 41
               

               Conread position:
               181-359
               

               Cow position:
               chr10:3180717-3180896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               38, 19
               

               Conread position:
               182-375
               

               Cow position:
               chr10:26607987-26608181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               89, 16
               

               Conread position:
               182-377
               

               Cow position:
               chr10:51306230-51306032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               85, 21
               

               Conread position:
               184-359
               

               Cow position:
               chr10:41916776-41916951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               32, 153
               

               Conread position:
               184-379
               

               Cow position:
               chr10:8923836-8923638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               83, 11
               

               Conread position:
               184-393
               

               Cow position:
               chr10:20110038-20110242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               85, 35
               

               Conread position:
               185-371
               

               Cow position:
               chr10:18845035-18845224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               85, 22
               

               Conread position:
               186-370
               

               Cow position:
               chr10:17887738-17887553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               80, 28
               

               Conread position:
               186-373
               

               Cow position:
               chr10:59839387-59839576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 41
               

               Conread position:
               186-415
               

               Cow position:
               chr10:21424782-21425015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               20, 207
               

               Conread position:
               186-502
               

               Cow position:
               chr10:20543419-20543121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               288, 31
               

               Conread position:
               186-502
               

               Cow position:
               chr10:25293689-25293367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               7, 64
               

               Conread position:
               188-382
               

               Cow position:
               chr10:38449398-38449598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               7, 155
               

               Conread position:
               188-412
               

               Cow position:
               chr10:41151709-41151485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               25, 9
               

               Conread position:
               188-502
               

               Cow position:
               chr10:6173256-6172933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               220
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               6, 54
               

               Conread position:
               188-502
               

               Cow position:
               chr10:31027748-31028052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               6, 138
               

               Conread position:
               188-502
               

               Cow position:
               chr10:42459435-42459765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 167
               

               Conread position:
               190-359
               

               Cow position:
               chr10:68979468-68979298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               24, 45
               

               Conread position:
               190-386
               

               Cow position:
               chr10:67627100-67627289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 46
               

               Conread position:
               191-370
               

               Cow position:
               chr10:69250420-69250241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               50, 36
               

               Conread position:
               193-384
               

               Cow position:
               chr10:2407228-2407410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               195-500
               

               Cow position:
               chr10:14909464-14909153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               32, 89
               

               Conread position:
               198-502
               

               Cow position:
               chr10:53057773-53058070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               209
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               75, 197
               

               Conread position:
               201-369
               

               Cow position:
               chr10:50141314-50141482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               76, 19
               

               Conread position:
               203-359
               

               Cow position:
               chr10:37528727-37528882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               65, 17
               

               Conread position:
               203-359
               

               Cow position:
               chr10:41737186-41737032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               74, 133
               

               Conread position:
               203-374
               

               Cow position:
               chr10:10699630-10699802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               203-401
               

               Cow position:
               chr10:48259353-48259549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               73, 97
               

               Conread position:
               203-517
               

               Cow position:
               chr10:61305159-61304847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               74, 17
               

               Conread position:
               203-519
               

               Cow position:
               chr10:42745795-42745484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               66, 24
               

               Conread position:
               203-526
               

               Cow position:
               chr10:29360787-29360449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               74, 35
               

               Conread position:
               204-503
               

               Cow position:
               chr10:23912618-23912921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               73, 17
               

               Conread position:
               208-373
               

               Cow position:
               chr10:52152399-52152232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               208-424
               

               Cow position:
               chr10:37235673-37235900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               9, 125
               

               Conread position:
               208-465
               

               Cow position:
               chr10:51844768-51844520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               14, 62
               

               Conread position:
               208-502
               

               Cow position:
               chr10:14975919-14976199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               69, 74
               

               Conread position:
               208-502
               

               Cow position:
               chr10:42230537-42230258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               9, 64
               

               Conread position:
               212-359
               

               Cow position:
               chr10:57773595-57773453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               214-346
               

               Cow position:
               chr10:43771492-43771361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               214-503
               

               Cow position:
               chr10:50315846-50315553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               220
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               61, 128
               

               Conread position:
               216-359
               

               Cow position:
               chr10:28194418-28194567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               14, 128
               

               Conread position:
               216-503
               

               Cow position:
               chr10:5745092-5745405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               217-367
               

               Cow position:
               chr10:1328295-1328450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 98
               

               Conread position:
               217-495
               

               Cow position:
               chr10:40645800-40645535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               59, 98
               

               Conread position:
               217-502
               

               Cow position:
               chr10:21709027-21709312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               24, 40
               

               Conread position:
               218-354
               

               Cow position:
               chr10:734618-734754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               218-379
               

               Cow position:
               chr10:39081263-39081097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               219-401
               

               Cow position:
               chr10:5886758-5886573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               149
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               221-356
               

               Cow position:
               chr10:54206566-54206432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               55, 46
               

               Conread position:
               221-367
               

               Cow position:
               chr10:42232898-42232753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               221-373
               

               Cow position:
               chr10:47158969-47158815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               221-377
               

               Cow position:
               chr10:23872599-23872756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               221-437
               

               Cow position:
               chr10:34554226-34554443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               221-502
               

               Cow position:
               chr10:11275532-11275252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               46, 99
               

               Conread position:
               222-374
               

               Cow position:
               chr10:6719762-6719609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 16
               

               Conread position:
               222-400
               

               Cow position:
               chr10:28176528-28176712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               45, 141
               

               Conread position:
               222-401
               

               Cow position:
               chr10:41941715-41941899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               222-503
               

               Cow position:
               chr10:30352709-30352438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               45, 186
               

               Conread position:
               222-512
               

               Cow position:
               chr10:24871750-24871462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               45, 98
               

               Conread position:
               222-526
               

               Cow position:
               chr10:57524043-57523733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               58, 39
               

               Conread position:
               223-369
               

               Cow position:
               chr10:69934917-69935064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               228-493
               

               Cow position:
               chr10:17844619-17844358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               47, 66
               

               Conread position:
               236-401
               

               Cow position:
               chr10:13765317-13765482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               41, 101
               

               Conread position:
               236-502
               

               Cow position:
               chr10:17806172-17805905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               40, 99
               

               Conread position:
               237-502
               

               Cow position:
               chr10:55097836-55098112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 89
               

               Conread position:
               242-401
               

               Cow position:
               chr10:48369763-48369927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               244-482
               

               Cow position:
               chr10:51696587-51696352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               173, 23
               

               Conread position:
               246-502
               

               Cow position:
               chr10:25071397-25071656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               21, 121
               

               Conread position:
               321-498
               

               Cow position:
               chr10:10101810-10101633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               39, 91
               

               Conread position:
               1-309
               

               Cow position:
               chr11:60447798-60448117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               32, 55
               

               Conread position:
               1-342
               

               Cow position:
               chr11:81997723-81998081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               90, 50
               

               Conread position:
               1-359
               

               Cow position:
               chr11:12174719-12175099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               27, 126
               

               Conread position:
               1-359
               

               Cow position:
               chr11:46582474-46582824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               250
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               266, 46
               

               Conread position:
               53-359
               

               Cow position:
               chr11:37991489-37991816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               38, 304
               

               Conread position:
               53-359
               

               Cow position:
               chr11:37995074-37995401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               38, 304
               

               Conread position:
               59-502
               

               Cow position:
               chr11:22505312-22504836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 315
               

               Conread position:
               78-466
               

               Cow position:
               chr11:67940716-67940335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               262
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               6, 124
               

               Conread position:
               90-502
               

               Cow position:
               chr11:34023871-34023449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 8
               

               Conread position:
               97-378
               

               Cow position:
               chr11:49096722-49097000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               59, 33
               

               Conread position:
               120-502
               

               Cow position:
               chr11:48650768-48650378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               271
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               15, 6
               

               Conread position:
               123-352
               

               Cow position:
               chr11:65159485-65159710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               71, 18
               

               Conread position:
               123-504
               

               Cow position:
               chr11:10877209-10876817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               41, 234
               

               Conread position:
               128-359
               

               Cow position:
               chr11:58313206-58312969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               30, 106
               

               Conread position:
               130-496
               

               Cow position:
               chr11:5221459-5221841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               276
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               14, 69
               

               Conread position:
               131-369
               

               Cow position:
               chr11:29014353-29014114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               54, 70
               

               Conread position:
               133-356
               

               Cow position:
               chr11:49216743-49216526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               132, 22
               

               Conread position:
               133-375
               

               Cow position:
               chr11:27681457-27681212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               83, 62
               

               Conread position:
               134-359
               

               Cow position:
               chr11:47193477-47193252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               60, 88
               

               Conread position:
               134-359
               

               Cow position:
               chr11:67745282-67745056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               14, 88
               

               Conread position:
               138-391
               

               Cow position:
               chr11:5288436-5288188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               6, 54
               

               Conread position:
               142-354
               

               Cow position:
               chr11:19238205-19238423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               142-359
               

               Cow position:
               chr11:67293690-67293899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               15, 6
               

               Conread position:
               142-367
               

               Cow position:
               chr11:50152866-50153097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               52, 82
               

               Conread position:
               142-527
               

               Cow position:
               chr11:70521877-70522258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 7
               

               Conread position:
               143-387
               

               Cow position:
               chr11:38009862-38010111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               19, 26
               

               Conread position:
               144-359
               

               Cow position:
               chr11:76768329-76768094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               13, 214
               

               Conread position:
               144-381
               

               Cow position:
               chr11:7333774-7334015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               147-359
               

               Cow position:
               chr11:46473736-46473957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               152-375
               

               Cow position:
               chr11:76114585-76114367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               124, 19
               

               Conread position:
               154-493
               

               Cow position:
               chr11:53142282-53142618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               252
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               112, 26
               

               Conread position:
               155-359
               

               Cow position:
               chr11:15125044-15125251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               28, 51
               

               Conread position:
               155-359
               

               Cow position:
               chr11:46770520-46770726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               64, 46
               

               Conread position:
               155-366
               

               Cow position:
               chr11:1573223-1573438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               32, 95
               

               Conread position:
               155-368
               

               Cow position:
               chr11:50951491-50951270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               155-383
               

               Cow position:
               chr11:14308573-14308343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               39, 62
               

               Conread position:
               155-384
               

               Cow position:
               chr11:50432313-50432083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               32, 44
               

               Conread position:
               155-401
               

               Cow position:
               chr11:1668613-1668361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               51, 79
               

               Conread position:
               155-401
               

               Cow position:
               chr11:42519676-42519431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               185
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               29, 73
               

               Conread position:
               155-492
               

               Cow position:
               chr11:60512723-60512367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               39, 5
               

               Conread position:
               155-502
               

               Cow position:
               chr11:70163834-70163492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               16, 30
               

               Conread position:
               156-359
               

               Cow position:
               chr11:25807819-25808030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               156-379
               

               Cow position:
               chr11:9213917-9214131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               28, 18
               

               Conread position:
               156-500
               

               Cow position:
               chr11:58614598-58614262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               38, 187
               

               Conread position:
               156-502
               

               Cow position:
               chr11:87169675-87170039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               238
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               157-359
               

               Cow position:
               chr11:17192347-17192553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               159-357
               

               Cow position:
               chr11:38381079-38380885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               12, 23
               

               Conread position:
               160-367
               

               Cow position:
               chr11:33103716-33103915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               66, 7
               

               Conread position:
               162-365
               

               Cow position:
               chr11:81174811-81174613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               104, 9
               

               Conread position:
               162-502
               

               Cow position:
               chr11:48932664-48933000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               115, 9
               

               Conread position:
               162-503
               

               Cow position:
               chr11:77241291-77240968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               115, 9
               

               Conread position:
               167-359
               

               Cow position:
               chr11:33341222-33341417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 140
               

               Conread position:
               167-359
               

               Cow position:
               chr11:35252068-35252254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               36, 23
               

               Conread position:
               168-491
               

               Cow position:
               chr11:19508219-19507889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               26, 30
               

               Conread position:
               170-359
               

               Cow position:
               chr11:35919861-35920046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               105, 14
               

               Conread position:
               175-389
               

               Cow position:
               chr11:45651079-45651294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               29, 51
               

               Conread position:
               179-407
               

               Cow position:
               chr11:3282967-3282739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               31, 147
               

               Conread position:
               181-359
               

               Cow position:
               chr11:61846095-61846277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               48, 35
               

               Conread position:
               182-407
               

               Cow position:
               chr11:40478975-40479191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               53, 75
               

               Conread position:
               186-502
               

               Cow position:
               chr11:9221822-9222132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               8, 27
               

               Conread position:
               188-502
               

               Cow position:
               chr11:43526224-43526548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               23, 54
               

               Conread position:
               190-356
               

               Cow position:
               chr11:35283025-35282854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 152
               

               Conread position:
               190-373
               

               Cow position:
               chr11:62019697-62019884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               82, 27
               

               Conread position:
               198-359
               

               Cow position:
               chr11:32652053-32651890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               28, 79
               

               Conread position:
               200-405
               

               Cow position:
               chr11:15278992-15279193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               200, 20
               

               Conread position:
               202-517
               

               Cow position:
               chr11:30110860-30110547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               16, 56
               

               Conread position:
               203-359
               

               Cow position:
               chr11:17112744-17112898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               23, 74
               

               Conread position:
               204-497
               

               Cow position:
               chr11:72023957-72023658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               7, 22
               

               Conread position:
               208-359
               

               Cow position:
               chr11:13942692-13942539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               61, 8
               

               Conread position:
               208-373
               

               Cow position:
               chr11:71846463-71846634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               208-403
               

               Cow position:
               chr11:36125560-36125358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               208-455
               

               Cow position:
               chr11:48474586-48474338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               9, 70
               

               Conread position:
               208-502
               

               Cow position:
               chr11:18210463-18210759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               9, 113
               

               Conread position:
               217-502
               

               Cow position:
               chr11:65988101-65987823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               59, 120
               

               Conread position:
               218-383
               

               Cow position:
               chr11:73473899-73474069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               57, 115
               

               Conread position:
               218-501
               

               Cow position:
               chr11:2568691-2568415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               19, 8
               

               Conread position:
               221-359
               

               Cow position:
               chr11:29608299-29608442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               221-367
               

               Cow position:
               chr11:81337101-81337252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               221-373
               

               Cow position:
               chr11:65970326-65970169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               221-379
               

               Cow position:
               chr11:58793808-58793966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               55, 117
               

               Conread position:
               221-388
               

               Cow position:
               chr11:63920418-63920588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               52, 101
               

               Conread position:
               221-389
               

               Cow position:
               chr11:58210599-58210768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               54, 112
               

               Conread position:
               221-430
               

               Cow position:
               chr11:80011971-80012182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               140, 50
               

               Conread position:
               221-499
               

               Cow position:
               chr11:81297167-81296880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               29, 50
               

               Conread position:
               222-359
               

               Cow position:
               chr11:26585847-26585707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               222-373
               

               Cow position:
               chr11:44642419-44642571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               222-402
               

               Cow position:
               chr11:50778241-50778055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               223-499
               

               Cow position:
               chr11:23418897-23418617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 185
               

               Conread position:
               228-502
               

               Cow position:
               chr11:21841921-21842182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               48, 33
               

               Conread position:
               228-503
               

               Cow position:
               chr11:24314417-24314141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               48, 5
               

               Conread position:
               229-521
               

               Cow position:
               chr11:51020183-51019881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               43, 220
               

               Conread position:
               232-407
               

               Cow position:
               chr11:10620465-10620645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               35, 67
               

               Conread position:
               234-388
               

               Cow position:
               chr11:41104753-41104910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               42, 79
               

               Conread position:
               237-503
               

               Cow position:
               chr11:28382483-28382217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               35, 184
               

               Conread position:
               240-375
               

               Cow position:
               chr11:18612535-18612672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               241-393
               

               Cow position:
               chr11:56866072-56866228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               242-503
               

               Cow position:
               chr11:37160644-37160371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               34, 103
               

               Conread position:
               242-503
               

               Cow position:
               chr11:37547063-37547335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               34, 209
               

               Conread position:
               246-415
               

               Cow position:
               chr11:65826895-65827064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               115, 27
               

               Conread position:
               251-521
               

               Cow position:
               chr11:44874212-44873950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 40
               

               Conread position:
               254-503
               

               Cow position:
               chr11:67600600-67600354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               172, 16
               

               Conread position:
               255-502
               

               Cow position:
               chr11:46580200-46579953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               36, 143
               

               Conread position:
               256-503
               

               Cow position:
               chr11:23739275-23739529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               11, 44
               

               Conread position:
               257-502
               

               Cow position:
               chr11:40608890-40609148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               258-481
               

               Cow position:
               chr11:22932140-22932347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               267-503
               

               Cow position:
               chr11:38577995-38578238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               9, 167
               

               Conread position:
               276-467
               

               Cow position:
               chr11:70278763-70278961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               46, 39
               

               Conread position:
               308-503
               

               Cow position:
               chr11:18104930-18105132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               101, 28
               

               Conread position:
               32-502
               

               Cow position:
               chr12:11539109-11539582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               336
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               57, 21
               

               Conread position:
               74-282
               

               Cow position:
               chr12:10894932-10894716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               17, 72
               

               Conread position:
               97-350
               

               Cow position:
               chr12:5797581-5797826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               179, 24
               

               Conread position:
               97-354
               

               Cow position:
               chr12:4656609-4656859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               134, 51
               

               Conread position:
               124-359
               

               Cow position:
               chr12:24755089-24755315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               152, 13
               

               Conread position:
               127-381
               

               Cow position:
               chr12:10028838-10028579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               29, 13
               

               Conread position:
               130-358
               

               Cow position:
               chr12:45555479-45555708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 19
               

               Conread position:
               133-359
               

               Cow position:
               chr12:31198702-31198477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               44, 99
               

               Conread position:
               141-383
               

               Cow position:
               chr12:4518263-4518512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               69, 19
               

               Conread position:
               142-373
               

               Cow position:
               chr12:41979369-41979604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               49, 173
               

               Conread position:
               145-502
               

               Cow position:
               chr12:25456043-25455668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               49, 17
               

               Conread position:
               155-356
               

               Cow position:
               chr12:32400115-32399908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               39, 146
               

               Conread position:
               155-502
               

               Cow position:
               chr12:18769157-18769519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               39, 297
               

               Conread position:
               155-502
               

               Cow position:
               chr12:30688258-30687901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               246
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               51, 81
               

               Conread position:
               156-359
               

               Cow position:
               chr12:36049317-36049107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               157-502
               

               Cow position:
               chr12:31218367-31218028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               18, 25
               

               Conread position:
               160-503
               

               Cow position:
               chr12:12939012-12939363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 77
               

               Conread position:
               162-420
               

               Cow position:
               chr12:27562929-27563186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               105, 9
               

               Conread position:
               164-367
               

               Cow position:
               chr12:794459-794251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               188-513
               

               Cow position:
               chr12:6210275-6210590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               29, 195
               

               Conread position:
               190-357
               

               Cow position:
               chr12:12982989-12983159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               24, 107
               

               Conread position:
               190-359
               

               Cow position:
               chr12:31925529-31925359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               190-364
               

               Cow position:
               chr12:7131721-7131889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               86, 24
               

               Conread position:
               190-376
               

               Cow position:
               chr12:44013957-44014148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               202-359
               

               Cow position:
               chr12:20795774-20795616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               203-371
               

               Cow position:
               chr12:36338869-36338700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               73, 30
               

               Conread position:
               203-371
               

               Cow position:
               chr12:36954511-36954678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               74, 17
               

               Conread position:
               203-379
               

               Cow position:
               chr12:7109054-7108877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               204-373
               

               Cow position:
               chr12:46143686-46143516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               208-373
               

               Cow position:
               chr12:15034110-15034274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               68, 24
               

               Conread position:
               208-425
               

               Cow position:
               chr12:1284597-1284816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 48
               

               Conread position:
               209-503
               

               Cow position:
               chr12:25619517-25619817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 129
               

               Conread position:
               217-359
               

               Cow position:
               chr12:25550429-25550572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 122
               

               Conread position:
               221-371
               

               Cow position:
               chr12:4866662-4866513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               56, 115
               

               Conread position:
               221-371
               

               Cow position:
               chr12:36450641-36450491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               221-401
               

               Cow position:
               chr12:21922284-21922102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               22, 126
               

               Conread position:
               221-502
               

               Cow position:
               chr12:4191020-4190722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 42
               

               Conread position:
               222-353
               

               Cow position:
               chr12:7055441-7055573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               232-399
               

               Cow position:
               chr12:38647895-38647732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               246-509
               

               Cow position:
               chr12:37270723-37270465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               194
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               31, 88
               

               Conread position:
               257-502
               

               Cow position:
               chr12:17708528-17708273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               276-502
               

               Cow position:
               chr12:28582700-28582922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               162, 95
               

               Conread position:
               1-336
               

               Cow position:
               chr13:18535448-18535091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               249
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               28, 56
               

               Conread position:
               1-359
               

               Cow position:
               chr13:3479617-3479985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               255
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               28, 56
               

               Conread position:
               1-372
               

               Cow position:
               chr13:21256475-21256102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 46
               

               Conread position:
               16-359
               

               Cow position:
               chr13:40543546-40543882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               78, 37
               

               Conread position:
               56-397
               

               Cow position:
               chr13:21694625-21694284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 133
               

               Conread position:
               85-359
               

               Cow position:
               chr13:57028381-57028093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               208
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               97-375
               

               Cow position:
               chr13:34995355-34995072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               196
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               16, 60
               

               Conread position:
               128-369
               

               Cow position:
               chr13:45497255-45497015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               82, 67
               

               Conread position:
               133-358
               

               Cow position:
               chr13:60487453-60487219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               23, 9
               

               Conread position:
               133-390
               

               Cow position:
               chr13:1959019-1959278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               61, 89
               

               Conread position:
               133-501
               

               Cow position:
               chr13:57746093-57745728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 209
               

               Conread position:
               137-502
               

               Cow position:
               chr13:35659766-35660144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               249
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               138-503
               

               Cow position:
               chr13:1839394-1839765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 200
               

               Conread position:
               143-350
               

               Cow position:
               chr13:46458641-46458851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               155-341
               

               Cow position:
               chr13:35654061-35653872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               48, 86
               

               Conread position:
               155-347
               

               Cow position:
               chr13:17346836-17347034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               51, 5
               

               Conread position:
               155-351
               

               Cow position:
               chr13:50823520-50823326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               112, 26
               

               Conread position:
               155-352
               

               Cow position:
               chr13:11768011-11767810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               155-359
               

               Cow position:
               chr13:24539522-24539733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               39, 189
               

               Conread position:
               155-359
               

               Cow position:
               chr13:30510090-30510299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               53, 66
               

               Conread position:
               155-367
               

               Cow position:
               chr13:9125698-9125919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               39, 158
               

               Conread position:
               155-369
               

               Cow position:
               chr13:32717843-32717623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               39, 73
               

               Conread position:
               155-373
               

               Cow position:
               chr13:6945398-6945625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               155-375
               

               Cow position:
               chr13:46501332-46501558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               155-383
               

               Cow position:
               chr13:18350871-18351102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               51, 87
               

               Conread position:
               155-395
               

               Cow position:
               chr13:7262423-7262668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               51, 87
               

               Conread position:
               155-399
               

               Cow position:
               chr13:24280278-24280526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               39, 21
               

               Conread position:
               155-512
               

               Cow position:
               chr13:16343717-16344071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               39, 88
               

               Conread position:
               156-359
               

               Cow position:
               chr13:47863668-47863461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               47, 33
               

               Conread position:
               156-359
               

               Cow position:
               chr13:48037653-48037858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               156-367
               

               Cow position:
               chr13:1766802-1767013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               50, 79
               

               Conread position:
               162-367
               

               Cow position:
               chr13:18243908-18244102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               162-415
               

               Cow position:
               chr13:22277126-22276878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               105, 19
               

               Conread position:
               167-411
               

               Cow position:
               chr13:52879455-52879699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               108, 37
               

               Conread position:
               167-497
               

               Cow position:
               chr13:4604336-4604665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 48
               

               Conread position:
               169-366
               

               Cow position:
               chr13:54331064-54331264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               34, 51
               

               Conread position:
               183-367
               

               Cow position:
               chr13:41608303-41608126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               184-399
               

               Cow position:
               chr13:6621537-6621320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               86, 20
               

               Conread position:
               186-359
               

               Cow position:
               chr13:41359813-41359987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               186-390
               

               Cow position:
               chr13:52284874-52285084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               28, 17
               

               Conread position:
               187-359
               

               Cow position:
               chr13:20834790-20834619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               90, 14
               

               Conread position:
               187-375
               

               Cow position:
               chr13:11290754-11290566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               90, 13
               

               Conread position:
               188-369
               

               Cow position:
               chr13:38278071-38277889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               6, 54
               

               Conread position:
               188-437
               

               Cow position:
               chr13:9246786-9247030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               89, 24
               

               Conread position:
               190-502
               

               Cow position:
               chr13:9570060-9570376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               168, 18
               

               Conread position:
               191-359
               

               Cow position:
               chr13:47591078-47590903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               12, 37
               

               Conread position:
               195-375
               

               Cow position:
               chr13:43384563-43384384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               72, 13
               

               Conread position:
               197-359
               

               Cow position:
               chr13:46984473-46984633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               12, 31
               

               Conread position:
               201-359
               

               Cow position:
               chr13:32316749-32316908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               202-383
               

               Cow position:
               chr13:14104763-14104582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               6, 134
               

               Conread position:
               202-502
               

               Cow position:
               chr13:5619423-5619718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               21, 92
               

               Conread position:
               203-367
               

               Cow position:
               chr13:37517053-37516890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               73, 17
               

               Conread position:
               203-372
               

               Cow position:
               chr13:21275938-21276106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               73, 17
               

               Conread position:
               203-389
               

               Cow position:
               chr13:15974696-15974878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               133, 23
               

               Conread position:
               203-502
               

               Cow position:
               chr13:14063438-14063139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               74, 16
               

               Conread position:
               204-359
               

               Cow position:
               chr13:55843564-55843722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               204-404
               

               Cow position:
               chr13:46637049-46636846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               7, 23
               

               Conread position:
               204-487
               

               Cow position:
               chr13:25926875-25927154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               73, 22
               

               Conread position:
               208-359
               

               Cow position:
               chr13:62019008-62018854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               68, 18
               

               Conread position:
               208-371
               

               Cow position:
               chr13:37069434-37069599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 158
               

               Conread position:
               208-456
               

               Cow position:
               chr13:25261726-25261480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               67, 159
               

               Conread position:
               208-485
               

               Cow position:
               chr13:33517838-33517566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               67, 172
               

               Conread position:
               208-503
               

               Cow position:
               chr13:16243311-16243597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               68, 12
               

               Conread position:
               211-401
               

               Cow position:
               chr13:15850075-15850273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               217-356
               

               Cow position:
               chr13:60221340-60221199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               59, 11
               

               Conread position:
               217-359
               

               Cow position:
               chr13:7010560-7010707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               217-359
               

               Cow position:
               chr13:17981888-17982027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               217-387
               

               Cow position:
               chr13:43848876-43849046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               60, 145
               

               Conread position:
               218-472
               

               Cow position:
               chr13:24822670-24822422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               58, 50
               

               Conread position:
               220-357
               

               Cow position:
               chr13:19451632-19451492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               55, 119
               

               Conread position:
               220-370
               

               Cow position:
               chr13:47852125-47852281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               221-371
               

               Cow position:
               chr13:35853254-35853100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               46, 120
               

               Conread position:
               221-383
               

               Cow position:
               chr13:29671340-29671179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               55, 115
               

               Conread position:
               221-407
               

               Cow position:
               chr13:30674046-30673858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               51, 27
               

               Conread position:
               221-502
               

               Cow position:
               chr13:16014914-16015174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               253, 32
               

               Conread position:
               221-503
               

               Cow position:
               chr13:11316462-11316188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               22, 121
               

               Conread position:
               222-371
               

               Cow position:
               chr13:15172311-15172157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               222-502
               

               Cow position:
               chr13:45023112-45022826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               44, 130
               

               Conread position:
               225-424
               

               Cow position:
               chr13:24238367-24238171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               51, 42
               

               Conread position:
               228-375
               

               Cow position:
               chr13:33218307-33218451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               48, 106
               

               Conread position:
               228-503
               

               Cow position:
               chr13:60966873-60967156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               149, 49
               

               Conread position:
               235-373
               

               Cow position:
               chr13:57494070-57493932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               41, 81
               

               Conread position:
               236-391
               

               Cow position:
               chr13:53012272-53012117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               44, 126
               

               Conread position:
               237-395
               

               Cow position:
               chr13:15731376-15731536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               42, 101
               

               Conread position:
               251-503
               

               Cow position:
               chr13:15945625-15945879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               20, 151
               

               Conread position:
               253-393
               

               Cow position:
               chr13:30693832-30693973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               17, 7
               

               Conread position:
               254-393
               

               Cow position:
               chr13:26255538-26255681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               13, 85
               

               Conread position:
               255-502
               

               Cow position:
               chr13:48251859-48251620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               21, 159
               

               Conread position:
               261-503
               

               Cow position:
               chr13:23856355-23856598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               15, 49
               

               Conread position:
               319-454
               

               Cow position:
               chr13:47188891-47189026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               95, 17
               

               Conread position:
               341-525
               

               Cow position:
               chr13:7297134-7297327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               20, 185
               

               Conread position:
               1-358
               

               Cow position:
               chr14:17651924-17651551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               31, 264
               

               Conread position:
               1-502
               

               Cow position:
               chr14:6456638-6456134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               524
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 124
               

               Conread position:
               82-386
               

               Cow position:
               chr14:47646539-47646240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               48, 39
               

               Conread position:
               86-501
               

               Cow position:
               chr14:26406752-26406335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               285
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               130, 62
               

               Conread position:
               97-359
               

               Cow position:
               chr14:35018724-35018460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               13, 24
               

               Conread position:
               109-358
               

               Cow position:
               chr14:25362389-25362642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               39, 8
               

               Conread position:
               113-359
               

               Cow position:
               chr14:18448965-18448711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               113-407
               

               Cow position:
               chr14:3588394-3588108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               81, 24
               

               Conread position:
               127-359
               

               Cow position:
               chr14:45584129-45583904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               33, 80
               

               Conread position:
               127-503
               

               Cow position:
               chr14:14307852-14308207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               9, 25
               

               Conread position:
               127-503
               

               Cow position:
               chr14:40737607-40737244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               37, 14
               

               Conread position:
               128-379
               

               Cow position:
               chr14:15514070-15514333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               17, 240
               

               Conread position:
               128-502
               

               Cow position:
               chr14:23526996-23527375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               6, 47
               

               Conread position:
               130-503
               

               Cow position:
               chr14:8488250-8488604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               270
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               76, 25
               

               Conread position:
               133-367
               

               Cow position:
               chr14:10906781-10907021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               70, 183
               

               Conread position:
               139-391
               

               Cow position:
               chr14:24837881-24837635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               128, 51
               

               Conread position:
               142-376
               

               Cow position:
               chr14:27578713-27578476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               9, 19
               

               Conread position:
               142-381
               

               Cow position:
               chr14:37333766-37334009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               69, 10
               

               Conread position:
               142-492
               

               Cow position:
               chr14:45292845-45292484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 54
               

               Conread position:
               144-358
               

               Cow position:
               chr14:31888625-31888411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               7, 17
               

               Conread position:
               144-358
               

               Cow position:
               chr14:35700503-35700726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               154-365
               

               Cow position:
               chr14:37624398-37624186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               40, 48
               

               Conread position:
               155-359
               

               Cow position:
               chr14:12488611-12488406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               34, 26
               

               Conread position:
               155-367
               

               Cow position:
               chr14:21018200-21018415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               56, 185
               

               Conread position:
               155-503
               

               Cow position:
               chr14:34163784-34163445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               72, 39
               

               Conread position:
               155-527
               

               Cow position:
               chr14:31399665-31400024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               259
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               64, 22
               

               Conread position:
               156-348
               

               Cow position:
               chr14:3437082-3437275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               38, 73
               

               Conread position:
               156-358
               

               Cow position:
               chr14:39807369-39807164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               71, 39
               

               Conread position:
               156-364
               

               Cow position:
               chr14:46782303-46782094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               38, 124
               

               Conread position:
               156-373
               

               Cow position:
               chr14:48427162-48427386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               38, 42
               

               Conread position:
               158-372
               

               Cow position:
               chr14:27848291-27848509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               54, 32
               

               Conread position:
               162-357
               

               Cow position:
               chr14:19624189-19624384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               43, 9
               

               Conread position:
               162-480
               

               Cow position:
               chr14:8541111-8540804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               182-401
               

               Cow position:
               chr14:12559369-12559146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               85, 47
               

               Conread position:
               184-401
               

               Cow position:
               chr14:12856722-12856934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               92, 16
               

               Conread position:
               185-469
               

               Cow position:
               chr14:8763376-8763665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               30, 12
               

               Conread position:
               186-362
               

               Cow position:
               chr14:18984781-18984605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               57, 34
               

               Conread position:
               186-502
               

               Cow position:
               chr14:44878668-44878345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               8, 66
               

               Conread position:
               187-353
               

               Cow position:
               chr14:8257059-8256890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               84, 33
               

               Conread position:
               188-503
               

               Cow position:
               chr14:36709240-36709593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               6, 156
               

               Conread position:
               190-402
               

               Cow position:
               chr14:33209228-33209020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               87, 30
               

               Conread position:
               190-503
               

               Cow position:
               chr14:43031932-43032251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 122
               

               Conread position:
               191-401
               

               Cow position:
               chr14:33580734-33580936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               193-513
               

               Cow position:
               chr14:35936383-35936061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               82, 11
               

               Conread position:
               197-379
               

               Cow position:
               chr14:23179132-23179313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               7, 141
               

               Conread position:
               200-381
               

               Cow position:
               chr14:44253032-44253212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               74, 35
               

               Conread position:
               201-377
               

               Cow position:
               chr14:44482929-44482751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               201-402
               

               Cow position:
               chr14:14280559-14280756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               76, 19
               

               Conread position:
               203-415
               

               Cow position:
               chr14:14187473-14187690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               19, 33
               

               Conread position:
               204-373
               

               Cow position:
               chr14:13997573-13997408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               131, 16
               

               Conread position:
               204-503
               

               Cow position:
               chr14:19850889-19850576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               154, 36
               

               Conread position:
               208-359
               

               Cow position:
               chr14:35360345-35360495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               65, 12
               

               Conread position:
               208-359
               

               Cow position:
               chr14:39616770-39616613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               208-359
               

               Cow position:
               chr14:42776334-42776180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               208-390
               

               Cow position:
               chr14:25231503-25231323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               9, 29
               

               Conread position:
               217-529
               

               Cow position:
               chr14:28605326-28605640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               58, 116
               

               Conread position:
               221-374
               

               Cow position:
               chr14:39821320-39821477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               46, 121
               

               Conread position:
               221-381
               

               Cow position:
               chr14:25385732-25385574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               55, 38
               

               Conread position:
               221-409
               

               Cow position:
               chr14:41960590-41960778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               38, 98
               

               Conread position:
               221-493
               

               Cow position:
               chr14:47974141-47974397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               253, 7
               

               Conread position:
               221-503
               

               Cow position:
               chr14:41128049-41128333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 117
               

               Conread position:
               222-452
               

               Cow position:
               chr14:16834492-16834725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               161, 54
               

               Conread position:
               223-393
               

               Cow position:
               chr14:19957752-19957581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               228-373
               

               Cow position:
               chr14:28378531-28378674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               237-379
               

               Cow position:
               chr14:38851800-38851940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               39, 45
               

               Conread position:
               237-415
               

               Cow position:
               chr14:48412708-48412522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               251-400
               

               Cow position:
               chr14:44861058-44860904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               258-503
               

               Cow position:
               chr14:20795987-20796229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               18, 69
               

               Conread position:
               261-470
               

               Cow position:
               chr14:27104291-27104498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               15, 151
               

               Conread position:
               261-488
               

               Cow position:
               chr14:26108838-26109085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               100, 222
               

               Conread position:
               275-496
               

               Cow position:
               chr14:31373336-31373110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               52, 71
               

               Conread position:
               1-283
               

               Cow position:
               chr15:29252309-29252014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               32, 54
               

               Conread position:
               1-311
               

               Cow position:
               chr15:46035836-46036169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               72, 27
               

               Conread position:
               1-359
               

               Cow position:
               chr15:53481433-53481786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 48
               

               Conread position:
               1-365
               

               Cow position:
               chr15:22160549-22160927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 6
               

               Conread position:
               3-359
               

               Cow position:
               chr15:40190141-40189775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               31, 24
               

               Conread position:
               97-413
               

               Cow position:
               chr15:11658497-11658169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               13, 283
               

               Conread position:
               109-358
               

               Cow position:
               chr15:37632792-37632534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               25, 8
               

               Conread position:
               114-374
               

               Cow position:
               chr15:4373568-4373832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               10, 18
               

               Conread position:
               121-472
               

               Cow position:
               chr15:26754999-26754666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               29, 16
               

               Conread position:
               123-393
               

               Cow position:
               chr15:23791567-23791833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               35, 14
               

               Conread position:
               125-358
               

               Cow position:
               chr15:9178104-9177871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               95, 76
               

               Conread position:
               130-375
               

               Cow position:
               chr15:34176350-34176104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               23, 53
               

               Conread position:
               140-359
               

               Cow position:
               chr15:22713710-22713488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               54, 79
               

               Conread position:
               141-367
               

               Cow position:
               chr15:31855401-31855170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 168
               

               Conread position:
               142-357
               

               Cow position:
               chr15:44209690-44209911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               64, 9
               

               Conread position:
               142-359
               

               Cow position:
               chr15:15215141-15215362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               144-502
               

               Cow position:
               chr15:43248648-43248289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               62, 196
               

               Conread position:
               153-503
               

               Cow position:
               chr15:20347380-20347753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               255
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               55, 161
               

               Conread position:
               154-367
               

               Cow position:
               chr15:24285114-24285336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               155-379
               

               Cow position:
               chr15:6282797-6282576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               51, 133
               

               Conread position:
               155-401
               

               Cow position:
               chr15:6491456-6491205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               22, 36
               

               Conread position:
               155-502
               

               Cow position:
               chr15:33680787-33681120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               51, 59
               

               Conread position:
               155-503
               

               Cow position:
               chr15:40724568-40724914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               48, 155
               

               Conread position:
               156-502
               

               Cow position:
               chr15:21802030-21801685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 64
               

               Conread position:
               157-501
               

               Cow position:
               chr15:53118458-53118796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               49, 182
               

               Conread position:
               161-400
               

               Cow position:
               chr15:14020622-14020854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               116, 10
               

               Conread position:
               162-401
               

               Cow position:
               chr15:4535061-4535291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               115, 9
               

               Conread position:
               162-472
               

               Cow position:
               chr15:23768114-23767797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               199, 9
               

               Conread position:
               162-516
               

               Cow position:
               chr15:20482695-20482316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               263
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               56, 9
               

               Conread position:
               167-370
               

               Cow position:
               chr15:35041728-35041517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               27, 203
               

               Conread position:
               167-375
               

               Cow position:
               chr15:25825707-25825502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               109, 28
               

               Conread position:
               167-441
               

               Cow position:
               chr15:44252510-44252789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               36, 169
               

               Conread position:
               168-371
               

               Cow position:
               chr15:19781692-19781888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               26, 47
               

               Conread position:
               182-367
               

               Cow position:
               chr15:38322993-38323180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               60, 13
               

               Conread position:
               182-377
               

               Cow position:
               chr15:13285202-13285394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               184-359
               

               Cow position:
               chr15:3572534-3572362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               35, 20
               

               Conread position:
               185-502
               

               Cow position:
               chr15:19725570-19725257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               93, 16
               

               Conread position:
               185-503
               

               Cow position:
               chr15:1297907-1298230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               92, 14
               

               Conread position:
               185-503
               

               Cow position:
               chr15:45678408-45678072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               81, 36
               

               Conread position:
               190-502
               

               Cow position:
               chr15:9062426-9062113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               74, 210
               

               Conread position:
               190-502
               

               Cow position:
               chr15:24128821-24129145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               191-369
               

               Cow position:
               chr15:24977022-24976839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               193-383
               

               Cow position:
               chr15:50964434-50964632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               203-358
               

               Cow position:
               chr15:22136869-22137024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               74, 17
               

               Conread position:
               203-373
               

               Cow position:
               chr15:19186432-19186259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               64, 17
               

               Conread position:
               203-403
               

               Cow position:
               chr15:38883339-38883541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               72, 16
               

               Conread position:
               203-468
               

               Cow position:
               chr15:17100523-17100261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               200
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               216, 17
               

               Conread position:
               203-503
               

               Cow position:
               chr15:11011417-11011117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               194, 16
               

               Conread position:
               203-503
               

               Cow position:
               chr15:31085723-31086014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               74, 18
               

               Conread position:
               204-387
               

               Cow position:
               chr15:45322974-45323153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               73, 15
               

               Conread position:
               208-358
               

               Cow position:
               chr15:13669714-13669563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               15, 129
               

               Conread position:
               208-502
               

               Cow position:
               chr15:32325509-32325783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               10, 21
               

               Conread position:
               212-365
               

               Cow position:
               chr15:8630090-8629937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               64, 14
               

               Conread position:
               216-394
               

               Cow position:
               chr15:8230378-8230203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               69, 27
               

               Conread position:
               217-359
               

               Cow position:
               chr15:7980349-7980492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               217-371
               

               Cow position:
               chr15:22607008-22607161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               59, 29
               

               Conread position:
               217-379
               

               Cow position:
               chr15:34255548-34255386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               59, 132
               

               Conread position:
               217-469
               

               Cow position:
               chr15:10487701-10487449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               42, 183
               

               Conread position:
               218-358
               

               Cow position:
               chr15:21836890-21837030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               218-369
               

               Cow position:
               chr15:17683226-17683380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               49, 99
               

               Conread position:
               218-502
               

               Cow position:
               chr15:38732429-38732146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               59, 14
               

               Conread position:
               221-357
               

               Cow position:
               chr15:15865974-15865832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               221-359
               

               Cow position:
               chr15:27732601-27732740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               221-377
               

               Cow position:
               chr15:37985357-37985201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               55, 116
               

               Conread position:
               221-401
               

               Cow position:
               chr15:3539196-3539014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               15, 67
               

               Conread position:
               221-472
               

               Cow position:
               chr15:12316127-12316395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               221-502
               

               Cow position:
               chr15:14322860-14322584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               56, 171
               

               Conread position:
               221-503
               

               Cow position:
               chr15:9642637-9642912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               46, 93
               

               Conread position:
               221-529
               

               Cow position:
               chr15:46468402-46468711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               54, 145
               

               Conread position:
               223-376
               

               Cow position:
               chr15:5653936-5654094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               228-373
               

               Cow position:
               chr15:20459090-20458944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               229-393
               

               Cow position:
               chr15:19812857-19813026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               236-511
               

               Cow position:
               chr15:6657325-6657605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               41, 80
               

               Conread position:
               247-381
               

               Cow position:
               chr15:26734839-26734974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               255-511
               

               Cow position:
               chr15:14577663-14577933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               22, 264
               

               Conread position:
               276-503
               

               Cow position:
               chr15:49279714-49279935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               137, 61
               

               Conread position:
               283-395
               

               Cow position:
               chr15:286724-286836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-342
               

               Cow position:
               chr16:46570915-46571281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               72, 27
               

               Conread position:
               1-350
               

               Cow position:
               chr16:11055607-11055256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               255
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               90, 32
               

               Conread position:
               1-500
               

               Cow position:
               chr16:5446973-5446478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               516
               

               Alignm identity:
               344
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               34, 54
               

               Conread position:
               2-359
               

               Cow position:
               chr16:15471034-15470662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               259
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               27, 55
               

               Conread position:
               2-409
               

               Cow position:
               chr16:36212274-36212682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               278
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               27, 18
               

               Conread position:
               10-373
               

               Cow position:
               chr16:52585910-52586270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               82, 19
               

               Conread position:
               33-338
               

               Cow position:
               chr16:26973874-26974174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               55, 20
               

               Conread position:
               97-424
               

               Cow position:
               chr16:4499449-4499122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               109-489
               

               Cow position:
               chr16:45799918-45799525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               274
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               82, 150
               

               Conread position:
               120-358
               

               Cow position:
               chr16:19152684-19152445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               37, 20
               

               Conread position:
               125-377
               

               Cow position:
               chr16:40272034-40271798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               95, 24
               

               Conread position:
               128-359
               

               Cow position:
               chr16:32384840-32385074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               130-359
               

               Cow position:
               chr16:17867491-17867728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               130-401
               

               Cow position:
               chr16:30572627-30572906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               64, 15
               

               Conread position:
               130-503
               

               Cow position:
               chr16:22868202-22868579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               23, 33
               

               Conread position:
               131-358
               

               Cow position:
               chr16:3918513-3918277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               10, 135
               

               Conread position:
               133-359
               

               Cow position:
               chr16:36930341-36930573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               12, 104
               

               Conread position:
               133-373
               

               Cow position:
               chr16:32132503-32132262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               18, 164
               

               Conread position:
               133-502
               

               Cow position:
               chr16:27005180-27004783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               23, 9
               

               Conread position:
               141-359
               

               Cow position:
               chr16:15677529-15677304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 27
               

               Conread position:
               143-367
               

               Cow position:
               chr16:50417722-50417949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               119, 13
               

               Conread position:
               144-359
               

               Cow position:
               chr16:10857658-10857877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               11, 5
               

               Conread position:
               154-359
               

               Cow position:
               chr16:55047154-55047357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               121, 28
               

               Conread position:
               155-356
               

               Cow position:
               chr16:23990528-23990737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               155-373
               

               Cow position:
               chr16:5243924-5243696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               155-373
               

               Cow position:
               chr16:34210454-34210680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               155-376
               

               Cow position:
               chr16:7639945-7639725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               112, 19
               

               Conread position:
               155-377
               

               Cow position:
               chr16:20633924-20634141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               39, 170
               

               Conread position:
               155-378
               

               Cow position:
               chr16:16548564-16548343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               27, 96
               

               Conread position:
               155-387
               

               Cow position:
               chr16:55586645-55586882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               155-389
               

               Cow position:
               chr16:3628766-3628535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               155-502
               

               Cow position:
               chr16:23025300-23024962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               254
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               39, 189
               

               Conread position:
               156-359
               

               Cow position:
               chr16:19632820-19633026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               111, 65
               

               Conread position:
               160-359
               

               Cow position:
               chr16:14799794-14799993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               34, 178
               

               Conread position:
               160-389
               

               Cow position:
               chr16:22786098-22786329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               34, 175
               

               Conread position:
               163-375
               

               Cow position:
               chr16:7426921-7427135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               10, 20
               

               Conread position:
               163-387
               

               Cow position:
               chr16:5636530-5636308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               172, 56
               

               Conread position:
               167-359
               

               Cow position:
               chr16:37442183-37442381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               167-372
               

               Cow position:
               chr16:11620865-11621069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               27, 54
               

               Conread position:
               167-502
               

               Cow position:
               chr16:14242313-14241976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               240
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               27, 56
               

               Conread position:
               167-516
               

               Cow position:
               chr16:53613246-53612892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               27, 178
               

               Conread position:
               178-470
               

               Cow position:
               chr16:15443575-15443262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               30, 19
               

               Conread position:
               182-359
               

               Cow position:
               chr16:11449692-11449516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               37, 13
               

               Conread position:
               182-425
               

               Cow position:
               chr16:17745755-17745520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               94, 21
               

               Conread position:
               184-377
               

               Cow position:
               chr16:53086409-53086595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               184-502
               

               Cow position:
               chr16:23747653-23747979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               10, 63
               

               Conread position:
               185-373
               

               Cow position:
               chr16:13043725-13043530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               15, 161
               

               Conread position:
               185-375
               

               Cow position:
               chr16:54100278-54100099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               25, 43
               

               Conread position:
               186-395
               

               Cow position:
               chr16:26373034-26373239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               91, 18
               

               Conread position:
               187-359
               

               Cow position:
               chr16:45157516-45157693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               28, 155
               

               Conread position:
               188-393
               

               Cow position:
               chr16:4979729-4979529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               31, 66
               

               Conread position:
               189-503
               

               Cow position:
               chr16:30515672-30515980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               28, 44
               

               Conread position:
               190-406
               

               Cow position:
               chr16:19445708-19445485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               77, 24
               

               Conread position:
               193-359
               

               Cow position:
               chr16:47780987-47780818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               82, 10
               

               Conread position:
               193-501
               

               Cow position:
               chr16:17606212-17605916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               10, 138
               

               Conread position:
               201-482
               

               Cow position:
               chr16:52218996-52218703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               66, 13
               

               Conread position:
               203-359
               

               Cow position:
               chr16:43804399-43804244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               73, 16
               

               Conread position:
               203-381
               

               Cow position:
               chr16:52889507-52889685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               69, 9
               

               Conread position:
               208-357
               

               Cow position:
               chr16:44667190-44667338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               14, 57
               

               Conread position:
               208-359
               

               Cow position:
               chr16:238166-238008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               208-359
               

               Cow position:
               chr16:14754422-14754575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               208-369
               

               Cow position:
               chr16:5477449-5477610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               35, 30
               

               Conread position:
               208-401
               

               Cow position:
               chr16:8366920-8367120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               208-482
               

               Cow position:
               chr16:53891881-53892168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               208-502
               

               Cow position:
               chr16:18693234-18693528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               70, 18
               

               Conread position:
               208-502
               

               Cow position:
               chr16:23681270-23680960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               9, 60
               

               Conread position:
               216-371
               

               Cow position:
               chr16:43275913-43275757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               217-373
               

               Cow position:
               chr16:47341590-47341749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               55, 9
               

               Conread position:
               217-375
               

               Cow position:
               chr16:17297476-17297316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               19, 122
               

               Conread position:
               217-503
               

               Cow position:
               chr16:16566372-16566087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               12, 37
               

               Conread position:
               218-359
               

               Cow position:
               chr16:15320576-15320722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               11, 105
               

               Conread position:
               218-407
               

               Cow position:
               chr16:11153302-11153488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               58, 49
               

               Conread position:
               221-367
               

               Cow position:
               chr16:23038215-23038361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               55, 116
               

               Conread position:
               221-379
               

               Cow position:
               chr16:25606989-25606829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               221-385
               

               Cow position:
               chr16:18427071-18426906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 117
               

               Conread position:
               221-401
               

               Cow position:
               chr16:46434236-46434411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               56, 24
               

               Conread position:
               221-407
               

               Cow position:
               chr16:44898843-44899032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               50, 100
               

               Conread position:
               221-483
               

               Cow position:
               chr16:33405871-33406137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               56, 163
               

               Conread position:
               221-503
               

               Cow position:
               chr16:42177337-42177059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               43, 98
               

               Conread position:
               222-502
               

               Cow position:
               chr16:20025332-20025049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               64, 143
               

               Conread position:
               222-502
               

               Cow position:
               chr16:41752687-41752955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               29, 169
               

               Conread position:
               236-400
               

               Cow position:
               chr16:1019429-1019259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               237-358
               

               Cow position:
               chr16:19976841-19976713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               250-389
               

               Cow position:
               chr16:11886491-11886628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               254-389
               

               Cow position:
               chr16:50934281-50934416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               254-503
               

               Cow position:
               chr16:51996906-51997160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               22, 85
               

               Conread position:
               255-502
               

               Cow position:
               chr16:50872320-50872554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               21, 81
               

               Conread position:
               255-503
               

               Cow position:
               chr16:25484220-25483975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               29, 83
               

               Conread position:
               261-471
               

               Cow position:
               chr16:935600-935804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               16, 136
               

               Conread position:
               300-502
               

               Cow position:
               chr16:3821007-3820790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               1-359
               

               Cow position:
               chr17:19946378-19946765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               261
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               90, 52
               

               Conread position:
               1-472
               

               Cow position:
               chr17:4677620-4677130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               33-370
               

               Cow position:
               chr17:8230754-8230394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 20
               

               Conread position:
               53-500
               

               Cow position:
               chr17:5996987-5997433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               313
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               38, 173
               

               Conread position:
               65-359
               

               Cow position:
               chr17:24129058-24128758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               97, 90
               

               Conread position:
               86-350
               

               Cow position:
               chr17:27612343-27612612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               99, 46
               

               Conread position:
               97-503
               

               Cow position:
               chr17:8279653-8280060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 40
               

               Conread position:
               123-371
               

               Cow position:
               chr17:34016945-34017192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               144, 26
               

               Conread position:
               127-502
               

               Cow position:
               chr17:20815397-20815025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               29, 93
               

               Conread position:
               139-359
               

               Cow position:
               chr17:1275530-1275307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               24, 44
               

               Conread position:
               139-502
               

               Cow position:
               chr17:17452594-17452946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               254
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               141-367
               

               Cow position:
               chr17:4299626-4299403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               15, 7
               

               Conread position:
               142-375
               

               Cow position:
               chr17:12216064-12216305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               142-381
               

               Cow position:
               chr17:38276695-38276458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               64, 13
               

               Conread position:
               142-396
               

               Cow position:
               chr17:12219927-12220187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               142-502
               

               Cow position:
               chr17:24787015-24787396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               261
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               125, 77
               

               Conread position:
               154-359
               

               Cow position:
               chr17:24580300-24580511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               40, 189
               

               Conread position:
               155-359
               

               Cow position:
               chr17:26085030-26084823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               51, 185
               

               Conread position:
               155-369
               

               Cow position:
               chr17:13236729-13236948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               54, 35
               

               Conread position:
               155-391
               

               Cow position:
               chr17:13989179-13989418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               39, 26
               

               Conread position:
               155-394
               

               Cow position:
               chr17:24761232-24761470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 102
               

               Conread position:
               155-502
               

               Cow position:
               chr17:20592226-20591889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               253
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               66, 167
               

               Conread position:
               156-359
               

               Cow position:
               chr17:37414901-37415112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               35, 180
               

               Conread position:
               156-367
               

               Cow position:
               chr17:3139835-3139630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               186, 39
               

               Conread position:
               158-359
               

               Cow position:
               chr17:3182592-3182796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               36, 66
               

               Conread position:
               162-358
               

               Cow position:
               chr17:3471400-3471210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               162-373
               

               Cow position:
               chr17:1295590-1295797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               115, 9
               

               Conread position:
               163-502
               

               Cow position:
               chr17:4064391-4064043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               91, 27
               

               Conread position:
               164-357
               

               Cow position:
               chr17:11305019-11304826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               30, 38
               

               Conread position:
               164-443
               

               Cow position:
               chr17:32554038-32554319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               30, 38
               

               Conread position:
               167-359
               

               Cow position:
               chr17:15450340-15450143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               34, 18
               

               Conread position:
               167-503
               

               Cow position:
               chr17:7559686-7560012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               60, 14
               

               Conread position:
               168-359
               

               Cow position:
               chr17:29040483-29040678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               169-371
               

               Cow position:
               chr17:27162630-27162428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               109, 34
               

               Conread position:
               178-503
               

               Cow position:
               chr17:27979145-27978823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               13, 50
               

               Conread position:
               181-397
               

               Cow position:
               chr17:23680950-23680734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               38, 77
               

               Conread position:
               182-502
               

               Cow position:
               chr17:24608820-24608489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 48
               

               Conread position:
               184-391
               

               Cow position:
               chr17:30999737-30999532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 10
               

               Conread position:
               185-375
               

               Cow position:
               chr17:7760500-7760691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               32, 71
               

               Conread position:
               186-367
               

               Cow position:
               chr17:39553-39364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               37, 22
               

               Conread position:
               186-489
               

               Cow position:
               chr17:36817906-36817597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               8, 254
               

               Conread position:
               190-372
               

               Cow position:
               chr17:3095785-3095600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               77, 30
               

               Conread position:
               190-502
               

               Cow position:
               chr17:8214886-8214575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               30, 117
               

               Conread position:
               190-504
               

               Cow position:
               chr17:5745288-5745593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               27, 60
               

               Conread position:
               193-366
               

               Cow position:
               chr17:27505082-27504907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               201-378
               

               Cow position:
               chr17:11655371-11655196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               47, 7
               

               Conread position:
               202-492
               

               Cow position:
               chr17:30413989-30413683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               203-357
               

               Cow position:
               chr17:966796-966949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               74, 17
               

               Conread position:
               203-367
               

               Cow position:
               chr17:242580-242416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               33, 17
               

               Conread position:
               203-373
               

               Cow position:
               chr17:27679295-27679470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               203-438
               

               Cow position:
               chr17:9778190-9777949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               158, 23
               

               Conread position:
               203-501
               

               Cow position:
               chr17:5246840-5246553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               73, 133
               

               Conread position:
               204-502
               

               Cow position:
               chr17:31798763-31798470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               23, 190
               

               Conread position:
               207-502
               

               Cow position:
               chr17:34316764-34317050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               68, 141
               

               Conread position:
               208-375
               

               Cow position:
               chr17:3578183-3578017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               17, 60
               

               Conread position:
               208-376
               

               Cow position:
               chr17:24818192-24818024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               21, 41
               

               Conread position:
               208-387
               

               Cow position:
               chr17:1358859-1359037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               9, 48
               

               Conread position:
               208-501
               

               Cow position:
               chr17:5767856-5767569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               15, 203
               

               Conread position:
               214-469
               

               Cow position:
               chr17:8066999-8067256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               63, 124
               

               Conread position:
               216-387
               

               Cow position:
               chr17:21312878-21313041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               61, 35
               

               Conread position:
               217-369
               

               Cow position:
               chr17:34563837-34563685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               18, 33
               

               Conread position:
               221-367
               

               Cow position:
               chr17:14848600-14848743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               221-377
               

               Cow position:
               chr17:25707886-25707725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               221-401
               

               Cow position:
               chr17:14088396-14088581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               223-400
               

               Cow position:
               chr17:24587547-24587365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               225-374
               

               Cow position:
               chr17:23517245-23517394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               52, 112
               

               Conread position:
               225-454
               

               Cow position:
               chr17:15376245-15376019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               52, 36
               

               Conread position:
               229-359
               

               Cow position:
               chr17:9753710-9753579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               229-516
               

               Cow position:
               chr17:6844096-6843809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               38, 85
               

               Conread position:
               236-381
               

               Cow position:
               chr17:36786409-36786550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               236-423
               

               Cow position:
               chr17:225944-225754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               99, 43
               

               Conread position:
               240-383
               

               Cow position:
               chr17:32407190-32407333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               36, 97
               

               Conread position:
               242-381
               

               Cow position:
               chr17:23205945-23205801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               243-502
               

               Cow position:
               chr17:24294075-24293819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               32, 56
               

               Conread position:
               256-468
               

               Cow position:
               chr17:11832247-11832458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               21, 81
               

               Conread position:
               32-503
               

               Cow position:
               chr18:31626741-31626242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               506
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 28
               

               Conread position:
               35-356
               

               Cow position:
               chr18:15859655-15859325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               12, 191
               

               Conread position:
               88-525
               

               Cow position:
               chr18:40336969-40337412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 31
               

               Conread position:
               97-365
               

               Cow position:
               chr18:248835-249094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               9, 16
               

               Conread position:
               109-359
               

               Cow position:
               chr18:28085538-28085290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               48, 8
               

               Conread position:
               109-502
               

               Cow position:
               chr18:11367787-11368184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               47, 22
               

               Conread position:
               112-503
               

               Cow position:
               chr18:10101454-10101057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               276
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               17, 40
               

               Conread position:
               121-359
               

               Cow position:
               chr18:1069865-1070098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               125-402
               

               Cow position:
               chr18:329320-329606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               20, 54
               

               Conread position:
               128-357
               

               Cow position:
               chr18:17669854-17670085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               66, 28
               

               Conread position:
               128-373
               

               Cow position:
               chr18:25002930-25003176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               27, 110
               

               Conread position:
               133-472
               

               Cow position:
               chr18:25970690-25971029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               232
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               23, 9
               

               Conread position:
               134-377
               

               Cow position:
               chr18:51298424-51298178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               14, 148
               

               Conread position:
               138-365
               

               Cow position:
               chr18:14480409-14480184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               23, 59
               

               Conread position:
               138-424
               

               Cow position:
               chr18:23424858-23424579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               56, 75
               

               Conread position:
               143-353
               

               Cow position:
               chr18:19487047-19486834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               14, 6
               

               Conread position:
               155-373
               

               Cow position:
               chr18:16842148-16842364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               16, 36
               

               Conread position:
               155-381
               

               Cow position:
               chr18:35797546-35797319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               48, 184
               

               Conread position:
               155-383
               

               Cow position:
               chr18:3073242-3073470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               116, 70
               

               Conread position:
               155-410
               

               Cow position:
               chr18:17334490-17334752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               65, 250
               

               Conread position:
               156-371
               

               Cow position:
               chr18:34052074-34052284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               111, 41
               

               Conread position:
               156-509
               

               Cow position:
               chr18:35472012-35472364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               40, 211
               

               Conread position:
               157-375
               

               Cow position:
               chr18:52869122-52868893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               162-359
               

               Cow position:
               chr18:36445345-36445147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               114, 9
               

               Conread position:
               162-371
               

               Cow position:
               chr18:22065445-22065660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               9, 77
               

               Conread position:
               162-401
               

               Cow position:
               chr18:11166886-11166652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               115, 9
               

               Conread position:
               167-359
               

               Cow position:
               chr18:19124089-19123890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               167-389
               

               Cow position:
               chr18:50700581-50700350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               167-502
               

               Cow position:
               chr18:42747502-42747181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               37, 132
               

               Conread position:
               167-503
               

               Cow position:
               chr18:4578558-4578901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 55
               

               Conread position:
               181-457
               

               Cow position:
               chr18:36186277-36186564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               23, 231
               

               Conread position:
               182-367
               

               Cow position:
               chr18:32860534-32860355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               94, 38
               

               Conread position:
               182-373
               

               Cow position:
               chr18:33606520-33606335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               186-371
               

               Cow position:
               chr18:5487135-5486954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               186-393
               

               Cow position:
               chr18:33843165-33843381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               13, 41
               

               Conread position:
               186-502
               

               Cow position:
               chr18:29224564-29224242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               81, 20
               

               Conread position:
               187-490
               

               Cow position:
               chr18:42060966-42060639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               7, 29
               

               Conread position:
               188-502
               

               Cow position:
               chr18:39115256-39115571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               79, 11
               

               Conread position:
               188-504
               

               Cow position:
               chr18:16258748-16258418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 31
               

               Conread position:
               190-503
               

               Cow position:
               chr18:33275197-33274887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               13, 133
               

               Conread position:
               192-502
               

               Cow position:
               chr18:36264903-36265218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               28, 21
               

               Conread position:
               201-502
               

               Cow position:
               chr18:45576732-45577033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               234
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               66, 120
               

               Conread position:
               203-400
               

               Cow position:
               chr18:47868329-47868129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               72, 17
               

               Conread position:
               206-359
               

               Cow position:
               chr18:23669691-23669846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               207-359
               

               Cow position:
               chr18:24491209-24491364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               17, 24
               

               Conread position:
               207-502
               

               Cow position:
               chr18:33157687-33157377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               10, 40
               

               Conread position:
               208-373
               

               Cow position:
               chr18:39279125-39279297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               208-503
               

               Cow position:
               chr18:36346194-36346473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               220
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               8, 22
               

               Conread position:
               209-367
               

               Cow position:
               chr18:20195637-20195796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               210-399
               

               Cow position:
               chr18:20127238-20127427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               66, 127
               

               Conread position:
               212-359
               

               Cow position:
               chr18:31997340-31997196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               10, 62
               

               Conread position:
               214-368
               

               Cow position:
               chr18:26391548-26391393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               13, 57
               

               Conread position:
               217-472
               

               Cow position:
               chr18:4515885-4515632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               59, 144
               

               Conread position:
               221-357
               

               Cow position:
               chr18:36207603-36207740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               221-359
               

               Cow position:
               chr18:22121027-22121167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               221-399
               

               Cow position:
               chr18:24977499-24977674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               56, 40
               

               Conread position:
               221-503
               

               Cow position:
               chr18:21067793-21067488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 22
               

               Conread position:
               222-369
               

               Cow position:
               chr18:21095106-21095248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               222-502
               

               Cow position:
               chr18:8191304-8191576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               33, 52
               

               Conread position:
               222-502
               

               Cow position:
               chr18:31082474-31082745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               188, 49
               

               Conread position:
               222-502
               

               Cow position:
               chr18:51212039-51211760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               45, 120
               

               Conread position:
               223-502
               

               Cow position:
               chr18:20215501-20215769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               251, 38
               

               Conread position:
               228-502
               

               Cow position:
               chr18:29043498-29043787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               210
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               228-502
               

               Cow position:
               chr18:51537814-51538087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               57, 19
               

               Conread position:
               236-502
               

               Cow position:
               chr18:11680563-11680284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               255-401
               

               Cow position:
               chr18:43114100-43114247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               256-502
               

               Cow position:
               chr18:33895999-33895767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               15, 82
               

               Conread position:
               260-397
               

               Cow position:
               chr18:51271924-51272063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               275-480
               

               Cow position:
               chr18:2295005-2295215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               142, 59
               

               Conread position:
               320-501
               

               Cow position:
               chr18:10115209-10115032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               154, 58
               

               Conread position:
               1-236
               

               Cow position:
               chr19:34683391-34683150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               26, 54
               

               Conread position:
               1-502
               

               Cow position:
               chr19:30436349-30435827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               539
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 54
               

               Conread position:
               6-223
               

               Cow position:
               chr19:21854069-21854305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 49
               

               Conread position:
               22-380
               

               Cow position:
               chr19:1695707-1695330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               265
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               64, 31
               

               Conread position:
               36-222
               

               Cow position:
               chr19:457216-457031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               50, 17
               

               Conread position:
               54-359
               

               Cow position:
               chr19:22508418-22508729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               37, 92
               

               Conread position:
               54-501
               

               Cow position:
               chr19:33620733-33621194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               311
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               32, 355
               

               Conread position:
               85-513
               

               Cow position:
               chr19:36602401-36601971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 68
               

               Conread position:
               96-377
               

               Cow position:
               chr19:48478985-48478687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               112-342
               

               Cow position:
               chr19:44490082-44489844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               12, 27
               

               Conread position:
               115-373
               

               Cow position:
               chr19:42465506-42465766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               15, 41
               

               Conread position:
               119-359
               

               Cow position:
               chr19:39751459-39751217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               22, 78
               

               Conread position:
               123-358
               

               Cow position:
               chr19:12170629-12170872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               18, 95
               

               Conread position:
               123-505
               

               Cow position:
               chr19:19242079-19241690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               284
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               25, 55
               

               Conread position:
               133-358
               

               Cow position:
               chr19:55236455-55236230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               12, 24
               

               Conread position:
               133-373
               

               Cow position:
               chr19:41212085-41212330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               139-373
               

               Cow position:
               chr19:38340025-38340252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               14, 45
               

               Conread position:
               141-359
               

               Cow position:
               chr19:42240331-42240555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               16, 60
               

               Conread position:
               142-357
               

               Cow position:
               chr19:3812055-3812277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               9, 31
               

               Conread position:
               142-359
               

               Cow position:
               chr19:43517189-43516972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               77, 58
               

               Conread position:
               142-467
               

               Cow position:
               chr19:33285324-33285622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               15, 39
               

               Conread position:
               144-368
               

               Cow position:
               chr19:33823272-33823044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               51, 73
               

               Conread position:
               150-345
               

               Cow position:
               chr19:16587273-16587473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               56, 25
               

               Conread position:
               153-359
               

               Cow position:
               chr19:22765558-22765353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               18, 8
               

               Conread position:
               154-357
               

               Cow position:
               chr19:18788159-18788368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               154-503
               

               Cow position:
               chr19:19661990-19661612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               155-487
               

               Cow position:
               chr19:5648714-5649043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               230
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               122, 65
               

               Conread position:
               155-502
               

               Cow position:
               chr19:19924656-19925024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               50, 167
               

               Conread position:
               155-502
               

               Cow position:
               chr19:39986601-39986941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               233
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               23, 118
               

               Conread position:
               155-520
               

               Cow position:
               chr19:1713200-1713561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               230
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               56, 12
               

               Conread position:
               156-350
               

               Cow position:
               chr19:36478837-36478640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               47, 34
               

               Conread position:
               156-358
               

               Cow position:
               chr19:8839545-8839340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               162-373
               

               Cow position:
               chr19:46918777-46918563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               60, 9
               

               Conread position:
               167-359
               

               Cow position:
               chr19:33468956-33468760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               167-371
               

               Cow position:
               chr19:31395962-31396166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               27, 48
               

               Conread position:
               167-373
               

               Cow position:
               chr19:23005429-23005643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               167-374
               

               Cow position:
               chr19:3084277-3084486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               27, 35
               

               Conread position:
               179-455
               

               Cow position:
               chr19:42092283-42092572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               181-502
               

               Cow position:
               chr19:3119500-3119163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               94, 136
               

               Conread position:
               184-359
               

               Cow position:
               chr19:31595210-31595035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               93, 15
               

               Conread position:
               186-492
               

               Cow position:
               chr19:42216019-42215705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               17, 41
               

               Conread position:
               186-502
               

               Cow position:
               chr19:35064281-35064597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               34, 18
               

               Conread position:
               186-503
               

               Cow position:
               chr19:9583225-9582920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               13, 43
               

               Conread position:
               187-359
               

               Cow position:
               chr19:33622213-33622042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               91, 33
               

               Conread position:
               189-393
               

               Cow position:
               chr19:42694900-42694690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               191-359
               

               Cow position:
               chr19:30461506-30461330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               202-380
               

               Cow position:
               chr19:37654715-37654534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               63, 18
               

               Conread position:
               203-491
               

               Cow position:
               chr19:14347903-14347602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               74, 15
               

               Conread position:
               204-504
               

               Cow position:
               chr19:43733653-43733355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               13, 61
               

               Conread position:
               208-375
               

               Cow position:
               chr19:43067075-43066902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               208-400
               

               Cow position:
               chr19:33033552-33033751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               208-489
               

               Cow position:
               chr19:7492324-7492039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               9, 66
               

               Conread position:
               212-502
               

               Cow position:
               chr19:11376522-11376819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 5
               

               Conread position:
               213-502
               

               Cow position:
               chr19:52305018-52305304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 50
               

               Conread position:
               214-359
               

               Cow position:
               chr19:31287666-31287808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               62, 122
               

               Conread position:
               214-369
               

               Cow position:
               chr19:25048718-25048876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 99
               

               Conread position:
               217-519
               

               Cow position:
               chr19:2260244-2260531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               54, 24
               

               Conread position:
               218-371
               

               Cow position:
               chr19:42647186-42647338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               58, 23
               

               Conread position:
               219-499
               

               Cow position:
               chr19:24423885-24423620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               255, 54
               

               Conread position:
               221-356
               

               Cow position:
               chr19:3905430-3905564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               55, 20
               

               Conread position:
               221-372
               

               Cow position:
               chr19:32457518-32457365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               46, 16
               

               Conread position:
               221-373
               

               Cow position:
               chr19:36461652-36461804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               55, 117
               

               Conread position:
               221-502
               

               Cow position:
               chr19:42706480-42706753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               55, 142
               

               Conread position:
               221-503
               

               Cow position:
               chr19:55646909-55647181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               47, 117
               

               Conread position:
               222-400
               

               Cow position:
               chr19:11145735-11145915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               222-498
               

               Cow position:
               chr19:40250888-40250617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               49, 180
               

               Conread position:
               232-502
               

               Cow position:
               chr19:36845111-36844841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               45, 36
               

               Conread position:
               238-353
               

               Cow position:
               chr19:54225440-54225556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               91
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               244-385
               

               Cow position:
               chr19:41024075-41023939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               37, 29
               

               Conread position:
               246-379
               

               Cow position:
               chr19:9294119-9293986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               31, 91
               

               Conread position:
               246-503
               

               Cow position:
               chr19:23304646-23304891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               31, 21
               

               Conread position:
               255-502
               

               Cow position:
               chr19:43418259-43417997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               204
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               22, 73
               

               Conread position:
               262-504
               

               Cow position:
               chr19:9703996-9704241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               281-472
               

               Cow position:
               chr19:29351856-29351664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               158
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               136, 28
               

               Conread position:
               332-482
               

               Cow position:
               chr19:30052466-30052613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               98, 62
               

               Conread position:
               340-517
               

               Cow position:
               chr19:42274096-42274291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1-346
               

               Cow position:
               chr2:50052264-50052628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               258
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               32, 11
               

               Conread position:
               1-369
               

               Cow position:
               chr2:39376477-39376090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               268
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               1-502
               

               Cow position:
               chr2:54726215-54726739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               536
               

               Alignm identity:
               356
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               26, 54
               

               Conread position:
               3-404
               

               Cow position:
               chr2:85244453-85244054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 52
               

               Conread position:
               6-373
               

               Cow position:
               chr2:56077843-56077452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               275
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               23, 49
               

               Conread position:
               8-354
               

               Cow position:
               chr2:1826523-1826878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               25, 48
               

               Conread position:
               53-502
               

               Cow position:
               chr2:36145083-36144647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               305
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               51, 41
               

               Conread position:
               85-358
               

               Cow position:
               chr2:52379145-52379427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               40, 63
               

               Conread position:
               97-355
               

               Cow position:
               chr2:14555734-14555999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               117-517
               

               Cow position:
               chr2:71495385-71494979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               274
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               40, 10
               

               Conread position:
               121-520
               

               Cow position:
               chr2:64765170-64765555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               264
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               31, 67
               

               Conread position:
               123-359
               

               Cow position:
               chr2:27145381-27145616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               13, 46
               

               Conread position:
               124-367
               

               Cow position:
               chr2:10296085-10295842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               33, 22
               

               Conread position:
               127-375
               

               Cow position:
               chr2:6292625-6292375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               37, 150
               

               Conread position:
               128-367
               

               Cow position:
               chr2:42592432-42592202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               71, 21
               

               Conread position:
               130-396
               

               Cow position:
               chr2:14749570-14749306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               196
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               131-359
               

               Cow position:
               chr2:72598774-72598552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               141-502
               

               Cow position:
               chr2:17444754-17444406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               9, 41
               

               Conread position:
               142-348
               

               Cow position:
               chr2:55255344-55255557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               14, 203
               

               Conread position:
               142-359
               

               Cow position:
               chr2:68084480-68084262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               52, 10
               

               Conread position:
               142-381
               

               Cow position:
               chr2:22859675-22859911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               52, 7
               

               Conread position:
               142-387
               

               Cow position:
               chr2:69047002-69046760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               81, 9
               

               Conread position:
               142-480
               

               Cow position:
               chr2:35359760-35359437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               19, 7
               

               Conread position:
               143-367
               

               Cow position:
               chr2:46202237-46202008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               51, 9
               

               Conread position:
               143-468
               

               Cow position:
               chr2:46189132-46189454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               51, 6
               

               Conread position:
               144-379
               

               Cow position:
               chr2:63865361-63865604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               152-472
               

               Cow position:
               chr2:32403021-32403338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 20
               

               Conread position:
               154-492
               

               Cow position:
               chr2:73069681-73069306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               155-353
               

               Cow position:
               chr2:15769536-15769736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               39, 64
               

               Conread position:
               155-358
               

               Cow position:
               chr2:41313848-41313638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               39, 189
               

               Conread position:
               155-367
               

               Cow position:
               chr2:51644971-51644763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               121, 59
               

               Conread position:
               155-367
               

               Cow position:
               chr2:76822294-76822513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               155-369
               

               Cow position:
               chr2:27613066-27613288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               155-379
               

               Cow position:
               chr2:31541451-31541222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               72, 95
               

               Conread position:
               156-424
               

               Cow position:
               chr2:79939491-79939752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               111, 51
               

               Conread position:
               156-487
               

               Cow position:
               chr2:42309600-42309960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               247
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               57, 146
               

               Conread position:
               159-496
               

               Cow position:
               chr2:53000460-53000139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               29, 43
               

               Conread position:
               162-377
               

               Cow position:
               chr2:22035587-22035381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               9, 20
               

               Conread position:
               162-503
               

               Cow position:
               chr2:79404041-79403723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               232
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               115, 10
               

               Conread position:
               164-358
               

               Cow position:
               chr2:42643147-42643345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               60, 33
               

               Conread position:
               169-502
               

               Cow position:
               chr2:50606488-50606141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 106
               

               Conread position:
               184-503
               

               Cow position:
               chr2:23640416-23640078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               19, 11
               

               Conread position:
               185-374
               

               Cow position:
               chr2:70708086-70708275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               82, 12
               

               Conread position:
               186-371
               

               Cow position:
               chr2:26219847-26219669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               47, 8
               

               Conread position:
               186-503
               

               Cow position:
               chr2:40427876-40428208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               17, 292
               

               Conread position:
               187-359
               

               Cow position:
               chr2:56827965-56828133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               89, 16
               

               Conread position:
               188-487
               

               Cow position:
               chr2:76110313-76110027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               89, 9
               

               Conread position:
               188-503
               

               Cow position:
               chr2:10867975-10868279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               6, 38
               

               Conread position:
               193-359
               

               Cow position:
               chr2:71120947-71120787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               86, 11
               

               Conread position:
               193-391
               

               Cow position:
               chr2:65050948-65050752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               194-359
               

               Cow position:
               chr2:43123232-43123066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               82, 26
               

               Conread position:
               198-346
               

               Cow position:
               chr2:25056860-25056711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               202-373
               

               Cow position:
               chr2:43718822-43718649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               202-529
               

               Cow position:
               chr2:21698908-21698572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 173
               

               Conread position:
               203-392
               

               Cow position:
               chr2:13354578-13354390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               74, 17
               

               Conread position:
               204-385
               

               Cow position:
               chr2:11706317-11706131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               74, 17
               

               Conread position:
               207-503
               

               Cow position:
               chr2:31264585-31264878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 204
               

               Conread position:
               208-367
               

               Cow position:
               chr2:44065492-44065332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               9, 130
               

               Conread position:
               208-371
               

               Cow position:
               chr2:68109842-68110007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               208-374
               

               Cow position:
               chr2:21355949-21356120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               10, 134
               

               Conread position:
               208-465
               

               Cow position:
               chr2:39068207-39067951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               15, 131
               

               Conread position:
               208-500
               

               Cow position:
               chr2:46745824-46745516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               227
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               15, 25
               

               Conread position:
               214-360
               

               Cow position:
               chr2:15162403-15162252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               214-386
               

               Cow position:
               chr2:62685531-62685357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               217-375
               

               Cow position:
               chr2:45231087-45230933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               217-387
               

               Cow position:
               chr2:29546102-29546279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               218-482
               

               Cow position:
               chr2:40492261-40491985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               220-359
               

               Cow position:
               chr2:36866880-36867017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               56, 66
               

               Conread position:
               220-502
               

               Cow position:
               chr2:68051069-68051356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               49, 178
               

               Conread position:
               221-359
               

               Cow position:
               chr2:62501434-62501571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               58, 65
               

               Conread position:
               221-420
               

               Cow position:
               chr2:7962371-7962170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               34, 168
               

               Conread position:
               221-479
               

               Cow position:
               chr2:32643274-32643025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               57, 96
               

               Conread position:
               221-499
               

               Cow position:
               chr2:22132452-22132736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               55, 114
               

               Conread position:
               221-501
               

               Cow position:
               chr2:26102667-26102379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               221-502
               

               Cow position:
               chr2:6720747-6720457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 146
               

               Conread position:
               221-503
               

               Cow position:
               chr2:469542-469272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               115, 52
               

               Conread position:
               221-503
               

               Cow position:
               chr2:26339933-26340201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               250, 32
               

               Conread position:
               221-503
               

               Cow position:
               chr2:70933260-70933558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               221-508
               

               Cow position:
               chr2:4740822-4740527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 83
               

               Conread position:
               222-410
               

               Cow position:
               chr2:36878328-36878521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               222-475
               

               Cow position:
               chr2:80074-80323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 18
               

               Conread position:
               222-502
               

               Cow position:
               chr2:41248453-41248155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               55, 96
               

               Conread position:
               223-389
               

               Cow position:
               chr2:29734393-29734220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               228-502
               

               Cow position:
               chr2:41897344-41897075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               40, 105
               

               Conread position:
               229-356
               

               Cow position:
               chr2:74763379-74763507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               232-503
               

               Cow position:
               chr2:85496442-85496723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               9, 23
               

               Conread position:
               236-364
               

               Cow position:
               chr2:52318093-52318218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               40, 99
               

               Conread position:
               240-503
               

               Cow position:
               chr2:44199020-44198755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               163, 33
               

               Conread position:
               244-389
               

               Cow position:
               chr2:62978801-62978947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               250-387
               

               Cow position:
               chr2:73999205-73999068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               319-503
               

               Cow position:
               chr2:36397737-36397556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               91, 42
               

               Conread position:
               350-503
               

               Cow position:
               chr2:54882955-54882790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               7-359
               

               Cow position:
               chr20:4909178-4908795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               273
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               22, 48
               

               Conread position:
               40-358
               

               Cow position:
               chr20:27566129-27565812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               68-367
               

               Cow position:
               chr20:21767313-21767607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               23, 43
               

               Conread position:
               85-370
               

               Cow position:
               chr20:24440513-24440211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               57, 144
               

               Conread position:
               97-350
               

               Cow position:
               chr20:15073779-15074033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               48, 126
               

               Conread position:
               112-359
               

               Cow position:
               chr20:5576814-5576558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 30
               

               Conread position:
               122-503
               

               Cow position:
               chr20:27977675-27978060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               13, 29
               

               Conread position:
               128-356
               

               Cow position:
               chr20:20350963-20351196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               29, 40
               

               Conread position:
               132-375
               

               Cow position:
               chr20:14831595-14831839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               71, 23
               

               Conread position:
               139-359
               

               Cow position:
               chr20:15576873-15577101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               142-371
               

               Cow position:
               chr20:6571339-6571110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               14, 133
               

               Conread position:
               142-485
               

               Cow position:
               chr20:23505836-23505491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               52, 13
               

               Conread position:
               142-499
               

               Cow position:
               chr20:12041137-12041502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               250
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               30, 13
               

               Conread position:
               144-359
               

               Cow position:
               chr20:19266163-19265947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               50, 75
               

               Conread position:
               149-398
               

               Cow position:
               chr20:4205971-4205714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               154-385
               

               Cow position:
               chr20:25017775-25018004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               43, 153
               

               Conread position:
               155-369
               

               Cow position:
               chr20:17670179-17669962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               23, 60
               

               Conread position:
               155-503
               

               Cow position:
               chr20:40511761-40512119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               39, 184
               

               Conread position:
               156-359
               

               Cow position:
               chr20:23834120-23833916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               15, 26
               

               Conread position:
               156-371
               

               Cow position:
               chr20:19238432-19238654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               38, 187
               

               Conread position:
               156-371
               

               Cow position:
               chr20:27843646-27843429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               111, 58
               

               Conread position:
               156-501
               

               Cow position:
               chr20:12420623-12420968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               239
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               67, 246
               

               Conread position:
               156-503
               

               Cow position:
               chr20:25293589-25293235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               47, 34
               

               Conread position:
               157-374
               

               Cow position:
               chr20:22920173-22920385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               119, 54
               

               Conread position:
               158-383
               

               Cow position:
               chr20:35897513-35897284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               161-506
               

               Cow position:
               chr20:10838224-10838584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 184
               

               Conread position:
               163-502
               

               Cow position:
               chr20:14735656-14735330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               244
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               82, 8
               

               Conread position:
               167-359
               

               Cow position:
               chr20:32577939-32578130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               60, 28
               

               Conread position:
               167-387
               

               Cow position:
               chr20:15148028-15148251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               167-521
               

               Cow position:
               chr20:15078648-15079011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               27, 215
               

               Conread position:
               182-404
               

               Cow position:
               chr20:20471760-20471532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               21, 12
               

               Conread position:
               186-359
               

               Cow position:
               chr20:22235281-22235104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               186-503
               

               Cow position:
               chr20:13465474-13465168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 34
               

               Conread position:
               188-449
               

               Cow position:
               chr20:20557691-20557961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               79, 26
               

               Conread position:
               188-491
               

               Cow position:
               chr20:39405721-39405426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               79, 32
               

               Conread position:
               190-358
               

               Cow position:
               chr20:3599429-3599599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               190-359
               

               Cow position:
               chr20:31311264-31311092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               39, 18
               

               Conread position:
               197-515
               

               Cow position:
               chr20:16157401-16157725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               226
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               30, 306
               

               Conread position:
               201-504
               

               Cow position:
               chr20:31564018-31564311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               19, 100
               

               Conread position:
               203-359
               

               Cow position:
               chr20:10818279-10818434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               65, 16
               

               Conread position:
               203-359
               

               Cow position:
               chr20:23850228-23850074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               75, 23
               

               Conread position:
               203-367
               

               Cow position:
               chr20:22959397-22959559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               73, 17
               

               Conread position:
               203-407
               

               Cow position:
               chr20:22007447-22007246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               209-401
               

               Cow position:
               chr20:37028716-37028519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               11, 87
               

               Conread position:
               216-398
               

               Cow position:
               chr20:11975175-11975356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               120, 55
               

               Conread position:
               217-504
               

               Cow position:
               chr20:13795709-13795438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               50, 106
               

               Conread position:
               221-372
               

               Cow position:
               chr20:3427083-3426934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               114, 52
               

               Conread position:
               221-373
               

               Cow position:
               chr20:7110186-7110340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               55, 118
               

               Conread position:
               221-490
               

               Cow position:
               chr20:8910849-8910586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               205, 55
               

               Conread position:
               221-501
               

               Cow position:
               chr20:10575863-10576158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               55, 116
               

               Conread position:
               221-502
               

               Cow position:
               chr20:36181246-36181528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               54, 113
               

               Conread position:
               221-503
               

               Cow position:
               chr20:19667894-19667611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               51, 145
               

               Conread position:
               222-358
               

               Cow position:
               chr20:14806814-14806677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               222-373
               

               Cow position:
               chr20:32847284-32847128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 147
               

               Conread position:
               222-483
               

               Cow position:
               chr20:7442198-7442456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               194
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               39, 55
               

               Conread position:
               228-404
               

               Cow position:
               chr20:11544529-11544709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               44, 115
               

               Conread position:
               229-487
               

               Cow position:
               chr20:5407833-5408096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               47, 94
               

               Conread position:
               238-371
               

               Cow position:
               chr20:39019607-39019474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               39, 99
               

               Conread position:
               242-401
               

               Cow position:
               chr20:382219-382379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               255-378
               

               Cow position:
               chr20:16956930-16957053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               255-503
               

               Cow position:
               chr20:9006649-9006918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 82
               

               Conread position:
               338-503
               

               Cow position:
               chr20:32352825-32352663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               72, 61
               

               Conread position:
               1-367
               

               Cow position:
               chr21:17218426-17218813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               275
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               25, 33
               

               Conread position:
               2-359
               

               Cow position:
               chr21:31763946-31764325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               272
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               89, 45
               

               Conread position:
               5-359
               

               Cow position:
               chr21:39641707-39641353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               259
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               24, 50
               

               Conread position:
               9-355
               

               Cow position:
               chr21:44292156-44292531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               20, 46
               

               Conread position:
               28-352
               

               Cow position:
               chr21:23550478-23550145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               64, 19
               

               Conread position:
               32-378
               

               Cow position:
               chr21:21919987-21919633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               238
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               59, 28
               

               Conread position:
               96-502
               

               Cow position:
               chr21:6051581-6051173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               263
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               98, 28
               

               Conread position:
               97-399
               

               Cow position:
               chr21:29002078-29002391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               213
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               13, 54
               

               Conread position:
               109-367
               

               Cow position:
               chr21:24944835-24945093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               32, 8
               

               Conread position:
               121-359
               

               Cow position:
               chr21:28993571-28993815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 30
               

               Conread position:
               124-369
               

               Cow position:
               chr21:44754730-44754979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               143, 57
               

               Conread position:
               125-372
               

               Cow position:
               chr21:34390925-34391172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               22, 152
               

               Conread position:
               129-358
               

               Cow position:
               chr21:34347050-34346819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               102, 12
               

               Conread position:
               129-369
               

               Cow position:
               chr21:27229751-27229994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               65, 13
               

               Conread position:
               133-355
               

               Cow position:
               chr21:4723518-4723294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               94, 48
               

               Conread position:
               133-359
               

               Cow position:
               chr21:28997860-28998095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               18, 23
               

               Conread position:
               133-503
               

               Cow position:
               chr21:5137451-5137818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               16, 40
               

               Conread position:
               138-359
               

               Cow position:
               chr21:28512562-28512343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               56, 11
               

               Conread position:
               142-520
               

               Cow position:
               chr21:20910065-20910439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               269
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               15, 7
               

               Conread position:
               143-502
               

               Cow position:
               chr21:29485009-29484639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               51, 55
               

               Conread position:
               144-367
               

               Cow position:
               chr21:30150237-30150466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               59, 8
               

               Conread position:
               154-359
               

               Cow position:
               chr21:42053247-42053454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               155-359
               

               Cow position:
               chr21:8289618-8289830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               155-367
               

               Cow position:
               chr21:23478699-23478916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               39, 180
               

               Conread position:
               155-503
               

               Cow position:
               chr21:28944347-28944717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               156-353
               

               Cow position:
               chr21:37282319-37282126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               120, 29
               

               Conread position:
               156-359
               

               Cow position:
               chr21:35997191-35996983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               156-366
               

               Cow position:
               chr21:29943019-29942810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               71, 39
               

               Conread position:
               162-490
               

               Cow position:
               chr21:24765292-24764969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               90, 9
               

               Conread position:
               162-502
               

               Cow position:
               chr21:8618279-8617927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               234
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               115, 9
               

               Conread position:
               167-367
               

               Cow position:
               chr21:30897419-30897222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               55, 34
               

               Conread position:
               175-373
               

               Cow position:
               chr21:17282705-17282500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               178-517
               

               Cow position:
               chr21:4276595-4276931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               16, 40
               

               Conread position:
               179-376
               

               Cow position:
               chr21:38482918-38482721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               24, 113
               

               Conread position:
               182-359
               

               Cow position:
               chr21:24698477-24698300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               95, 32
               

               Conread position:
               182-373
               

               Cow position:
               chr21:9416233-9416039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               93, 19
               

               Conread position:
               184-373
               

               Cow position:
               chr21:16166646-16166836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               42, 11
               

               Conread position:
               184-389
               

               Cow position:
               chr21:29247864-29248063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               118, 20
               

               Conread position:
               185-502
               

               Cow position:
               chr21:18828319-18828647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               9, 157
               

               Conread position:
               186-359
               

               Cow position:
               chr21:12973265-12973442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               188-502
               

               Cow position:
               chr21:22722492-22722816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               229
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               6, 14
               

               Conread position:
               190-394
               

               Cow position:
               chr21:5425957-5425757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               86, 31
               

               Conread position:
               196-359
               

               Cow position:
               chr21:36712170-36712009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               80, 8
               

               Conread position:
               196-373
               

               Cow position:
               chr21:19436145-19436320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               80, 24
               

               Conread position:
               201-459
               

               Cow position:
               chr21:14464549-14464299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               59, 146
               

               Conread position:
               202-349
               

               Cow position:
               chr21:33215555-33215402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               6, 142
               

               Conread position:
               202-373
               

               Cow position:
               chr21:36657538-36657370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               12, 18
               

               Conread position:
               203-373
               

               Cow position:
               chr21:19258795-19258623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               66, 17
               

               Conread position:
               203-373
               

               Cow position:
               chr21:45330636-45330811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               203-503
               

               Cow position:
               chr21:2927237-2927545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               68, 37
               

               Conread position:
               212-359
               

               Cow position:
               chr21:8232779-8232926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               64, 124
               

               Conread position:
               216-401
               

               Cow position:
               chr21:45355791-45355605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               60, 98
               

               Conread position:
               217-378
               

               Cow position:
               chr21:13256759-13256596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               217-503
               

               Cow position:
               chr21:21000076-21000361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 40
               

               Conread position:
               221-359
               

               Cow position:
               chr21:16270682-16270543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               55, 117
               

               Conread position:
               221-502
               

               Cow position:
               chr21:46132027-46132305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               6, 178
               

               Conread position:
               222-359
               

               Cow position:
               chr21:14168018-14167880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               222-502
               

               Cow position:
               chr21:12801798-12802091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 115
               

               Conread position:
               228-382
               

               Cow position:
               chr21:26742645-26742798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               228-408
               

               Cow position:
               chr21:24598604-24598421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               236-359
               

               Cow position:
               chr21:27089868-27089991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               40, 24
               

               Conread position:
               248-501
               

               Cow position:
               chr21:34835503-34835765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               199
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               29, 71
               

               Conread position:
               257-502
               

               Cow position:
               chr21:27614201-27613958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               20, 88
               

               Conread position:
               259-407
               

               Cow position:
               chr21:33947337-33947481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               17, 10
               

               Conread position:
               276-500
               

               Cow position:
               chr21:28955419-28955173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               329-502
               

               Cow position:
               chr21:31661924-31661752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               145, 69
               

               Conread position:
               345-511
               

               Cow position:
               chr21:10046091-10045918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               16, 167
               

               Conread position:
               1-268
               

               Cow position:
               chr22:31555353-31555629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               90, 13
               

               Conread position:
               7-301
               

               Cow position:
               chr22:20371467-20371161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 48
               

               Conread position:
               10-455
               

               Cow position:
               chr22:1028615-1028151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               327
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               32-314
               

               Cow position:
               chr22:44690093-44689806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               59, 22
               

               Conread position:
               33-359
               

               Cow position:
               chr22:25259153-25259489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               61, 20
               

               Conread position:
               78-352
               

               Cow position:
               chr22:39452621-39452339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               17, 35
               

               Conread position:
               97-377
               

               Cow position:
               chr22:41245258-41244972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               16, 225
               

               Conread position:
               115-367
               

               Cow position:
               chr22:26184171-26184424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               80, 186
               

               Conread position:
               115-502
               

               Cow position:
               chr22:26822353-26821959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               272
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               15, 52
               

               Conread position:
               126-373
               

               Cow position:
               chr22:15398596-15398848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               52, 46
               

               Conread position:
               126-503
               

               Cow position:
               chr22:34886640-34886259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 57
               

               Conread position:
               129-397
               

               Cow position:
               chr22:23861173-23861437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               200
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               65, 45
               

               Conread position:
               130-358
               

               Cow position:
               chr22:2476234-2476464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               26, 19
               

               Conread position:
               130-373
               

               Cow position:
               chr22:4043905-4043663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               21, 91
               

               Conread position:
               133-359
               

               Cow position:
               chr22:10683686-10683921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               29, 16
               

               Conread position:
               133-359
               

               Cow position:
               chr22:44835619-44835386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               23, 9
               

               Conread position:
               139-491
               

               Cow position:
               chr22:15428480-15428829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               244
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               67, 37
               

               Conread position:
               140-469
               

               Cow position:
               chr22:14820595-14820912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               8, 36
               

               Conread position:
               142-359
               

               Cow position:
               chr22:4651145-4650925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               142-489
               

               Cow position:
               chr22:7979666-7979311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               78, 14
               

               Conread position:
               143-373
               

               Cow position:
               chr22:38939986-38940219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               51, 12
               

               Conread position:
               152-401
               

               Cow position:
               chr22:25341967-25341722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               5, 20
               

               Conread position:
               154-372
               

               Cow position:
               chr22:24126891-24126675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               113, 63
               

               Conread position:
               154-377
               

               Cow position:
               chr22:13187831-13187598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               28, 70
               

               Conread position:
               155-359
               

               Cow position:
               chr22:39303051-39303262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               39, 153
               

               Conread position:
               155-380
               

               Cow position:
               chr22:19787728-19787956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               27, 103
               

               Conread position:
               155-503
               

               Cow position:
               chr22:45355330-45354996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               242
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               46, 62
               

               Conread position:
               156-359
               

               Cow position:
               chr22:609987-610185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               38, 125
               

               Conread position:
               156-359
               

               Cow position:
               chr22:6583785-6583584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               60, 34
               

               Conread position:
               158-359
               

               Cow position:
               chr22:30655260-30655062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               30, 57
               

               Conread position:
               162-502
               

               Cow position:
               chr22:26658989-26658632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               115, 9
               

               Conread position:
               167-522
               

               Cow position:
               chr22:36761567-36761210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               27, 76
               

               Conread position:
               182-401
               

               Cow position:
               chr22:534417-534195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               93, 21
               

               Conread position:
               184-503
               

               Cow position:
               chr22:29574913-29575230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               221, 10
               

               Conread position:
               190-493
               

               Cow position:
               chr22:34750593-34750267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               192-366
               

               Cow position:
               chr22:28146596-28146421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               85, 173
               

               Conread position:
               194-359
               

               Cow position:
               chr22:22968145-22967975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               32, 69
               

               Conread position:
               195-503
               

               Cow position:
               chr22:14154796-14155094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               51, 31
               

               Conread position:
               201-502
               

               Cow position:
               chr22:41927438-41927734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               26, 190
               

               Conread position:
               203-503
               

               Cow position:
               chr22:13720625-13720911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               34, 17
               

               Conread position:
               204-479
               

               Cow position:
               chr22:25311641-25311917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               15, 190
               

               Conread position:
               207-403
               

               Cow position:
               chr22:16263917-16263723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               71, 13
               

               Conread position:
               208-393
               

               Cow position:
               chr22:845799-845613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               19, 130
               

               Conread position:
               208-501
               

               Cow position:
               chr22:22613008-22612705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               15, 48
               

               Conread position:
               208-502
               

               Cow position:
               chr22:6936109-6935811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               9, 46
               

               Conread position:
               208-503
               

               Cow position:
               chr22:3837331-3837616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               19, 6
               

               Conread position:
               214-394
               

               Cow position:
               chr22:6014239-6014422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               216-386
               

               Cow position:
               chr22:12777694-12777866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               61, 135
               

               Conread position:
               216-406
               

               Cow position:
               chr22:9521034-9520847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               60, 118
               

               Conread position:
               217-373
               

               Cow position:
               chr22:12086492-12086648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               67, 145
               

               Conread position:
               221-375
               

               Cow position:
               chr22:15090623-15090468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               221-502
               

               Cow position:
               chr22:27791355-27791058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               221-516
               

               Cow position:
               chr22:39601153-39600860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               57, 39
               

               Conread position:
               225-348
               

               Cow position:
               chr22:22399060-22399183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-401
               

               Cow position:
               chr22:22039150-22038989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               241-502
               

               Cow position:
               chr22:838563-838835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               26, 97
               

               Conread position:
               246-383
               

               Cow position:
               chr22:28058186-28058321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               31, 74
               

               Conread position:
               251-511
               

               Cow position:
               chr22:19139595-19139869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               16, 268
               

               Conread position:
               256-407
               

               Cow position:
               chr22:23854828-23854676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               265-503
               

               Cow position:
               chr22:23833134-23832895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               6, 72
               

               Conread position:
               276-401
               

               Cow position:
               chr22:9286565-9286690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               113, 60
               

               Conread position:
               308-503
               

               Cow position:
               chr22:17125265-17125062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               341-503
               

               Cow position:
               chr22:10586192-10586357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               1-372
               

               Cow position:
               chr23:26435336-26435721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               32-359
               

               Cow position:
               chr23:5883626-5883272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               56, 23
               

               Conread position:
               85-369
               

               Cow position:
               chr23:15728653-15728949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               84, 241
               

               Conread position:
               96-375
               

               Cow position:
               chr23:5737704-5737994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               97-358
               

               Cow position:
               chr23:1883410-1883143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               13, 82
               

               Conread position:
               97-459
               

               Cow position:
               chr23:16881147-16881509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               45, 29
               

               Conread position:
               112-359
               

               Cow position:
               chr23:16058593-16058348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               14, 61
               

               Conread position:
               120-358
               

               Cow position:
               chr23:12408516-12408761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               14, 31
               

               Conread position:
               130-353
               

               Cow position:
               chr23:3715755-3715520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               24, 200
               

               Conread position:
               130-401
               

               Cow position:
               chr23:29242926-29242651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               8, 44
               

               Conread position:
               133-372
               

               Cow position:
               chr23:29459108-29459352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               10, 112
               

               Conread position:
               135-392
               

               Cow position:
               chr23:14662029-14662280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               132, 21
               

               Conread position:
               136-359
               

               Cow position:
               chr23:25531474-25531695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               48, 31
               

               Conread position:
               137-375
               

               Cow position:
               chr23:22588292-22588537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               41, 19
               

               Conread position:
               138-504
               

               Cow position:
               chr23:9725255-9725616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               14, 32
               

               Conread position:
               139-367
               

               Cow position:
               chr23:10415055-10415285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               18, 10
               

               Conread position:
               146-501
               

               Cow position:
               chr23:11380287-11380649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               48, 177
               

               Conread position:
               151-359
               

               Cow position:
               chr23:16170649-16170448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               34, 11
               

               Conread position:
               155-492
               

               Cow position:
               chr23:9711626-9711965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               39, 78
               

               Conread position:
               156-373
               

               Cow position:
               chr23:16609852-16610075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               162-370
               

               Cow position:
               chr23:14164460-14164662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               167-373
               

               Cow position:
               chr23:3247529-3247323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 106
               

               Conread position:
               168-502
               

               Cow position:
               chr23:29742333-29741982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               249
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               13, 49
               

               Conread position:
               169-374
               

               Cow position:
               chr23:2371315-2371116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 48
               

               Conread position:
               169-503
               

               Cow position:
               chr23:21631161-21630842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               166, 25
               

               Conread position:
               186-503
               

               Cow position:
               chr23:28700924-28700608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               222
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               81, 28
               

               Conread position:
               200-359
               

               Cow position:
               chr23:27563801-27563960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               76, 21
               

               Conread position:
               202-367
               

               Cow position:
               chr23:20744687-20744848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               203-358
               

               Cow position:
               chr23:28366422-28366576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               74, 22
               

               Conread position:
               207-367
               

               Cow position:
               chr23:26003967-26003805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               208-353
               

               Cow position:
               chr23:7321899-7322042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               27, 85
               

               Conread position:
               208-359
               

               Cow position:
               chr23:7937642-7937790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               69, 45
               

               Conread position:
               208-502
               

               Cow position:
               chr23:21394665-21394967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               29, 12
               

               Conread position:
               208-503
               

               Cow position:
               chr23:11434361-11434640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               264, 6
               

               Conread position:
               218-504
               

               Cow position:
               chr23:26067004-26066727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               200, 51
               

               Conread position:
               219-502
               

               Cow position:
               chr23:30912404-30912675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               8, 174
               

               Conread position:
               221-381
               

               Cow position:
               chr23:38414070-38414230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               55, 27
               

               Conread position:
               221-482
               

               Cow position:
               chr23:17092596-17092863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               16, 11
               

               Conread position:
               221-502
               

               Cow position:
               chr23:11933136-11932848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               59, 196
               

               Conread position:
               222-371
               

               Cow position:
               chr23:26461962-26462112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               222-401
               

               Cow position:
               chr23:11853513-11853693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               47, 108
               

               Conread position:
               223-400
               

               Cow position:
               chr23:3967665-3967839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               231-358
               

               Cow position:
               chr23:28026726-28026596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               232-375
               

               Cow position:
               chr23:11129111-11128967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               232-503
               

               Cow position:
               chr23:11209890-11209623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               35, 168
               

               Conread position:
               236-503
               

               Cow position:
               chr23:39806743-39806490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               41, 17
               

               Conread position:
               256-387
               

               Cow position:
               chr23:11054971-11054839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               257-402
               

               Cow position:
               chr23:26795052-26795198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               294-502
               

               Cow position:
               chr23:2269478-2269685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               110, 38
               

               Conread position:
               1-282
               

               Cow position:
               chr24:14724806-14724509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               85, 52
               

               Conread position:
               2-493
               

               Cow position:
               chr24:40257392-40257881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               516
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 51
               

               Conread position:
               3-212
               

               Cow position:
               chr24:16844220-16844421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               85, 25
               

               Conread position:
               9-298
               

               Cow position:
               chr24:30710965-30710673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               20, 53
               

               Conread position:
               91-501
               

               Cow position:
               chr24:17763274-17763661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               273
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               52, 26
               

               Conread position:
               107-371
               

               Cow position:
               chr24:30900249-30900516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               14, 85
               

               Conread position:
               115-359
               

               Cow position:
               chr24:39955067-39955323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               127-359
               

               Cow position:
               chr24:39681815-39681578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               9, 73
               

               Conread position:
               130-505
               

               Cow position:
               chr24:25229096-25229476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               263
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               16, 216
               

               Conread position:
               134-375
               

               Cow position:
               chr24:29845325-29845563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               142, 50
               

               Conread position:
               135-407
               

               Cow position:
               chr24:39742778-39742502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               21, 35
               

               Conread position:
               140-377
               

               Cow position:
               chr24:28028762-28029000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               15, 9
               

               Conread position:
               141-373
               

               Cow position:
               chr24:6149966-6149739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               142-502
               

               Cow position:
               chr24:37386409-37386756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               85, 13
               

               Conread position:
               145-503
               

               Cow position:
               chr24:6507829-6508188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 22
               

               Conread position:
               146-366
               

               Cow position:
               chr24:39500339-39500567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               155-356
               

               Cow position:
               chr24:35529850-35529649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               121, 49
               

               Conread position:
               155-357
               

               Cow position:
               chr24:43733901-43733694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               155-369
               

               Cow position:
               chr24:37204948-37205167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               155-491
               

               Cow position:
               chr24:30860567-30860241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               51, 186
               

               Conread position:
               155-503
               

               Cow position:
               chr24:18076077-18075740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               40, 62
               

               Conread position:
               156-353
               

               Cow position:
               chr24:16476332-16476136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               120, 26
               

               Conread position:
               157-383
               

               Cow position:
               chr24:6061469-6061692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               51, 181
               

               Conread position:
               162-374
               

               Cow position:
               chr24:35836320-35836530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               113, 32
               

               Conread position:
               167-353
               

               Cow position:
               chr24:27259064-27259250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               63, 37
               

               Conread position:
               167-502
               

               Cow position:
               chr24:23694977-23695322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 18
               

               Conread position:
               167-503
               

               Cow position:
               chr24:32758841-32759184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               250
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               27, 240
               

               Conread position:
               169-530
               

               Cow position:
               chr24:28279557-28279187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               248
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               171-369
               

               Cow position:
               chr24:32669190-32668989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               96, 26
               

               Conread position:
               182-373
               

               Cow position:
               chr24:814362-814556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               182-503
               

               Cow position:
               chr24:2730672-2730979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               94, 21
               

               Conread position:
               186-503
               

               Cow position:
               chr24:13783600-13783929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               234
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               85, 28
               

               Conread position:
               188-365
               

               Cow position:
               chr24:15919600-15919421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               79, 24
               

               Conread position:
               188-367
               

               Cow position:
               chr24:27683542-27683727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               15, 40
               

               Conread position:
               188-502
               

               Cow position:
               chr24:27096579-27096262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               6, 91
               

               Conread position:
               188-502
               

               Cow position:
               chr24:27608208-27608540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               89, 13
               

               Conread position:
               190-407
               

               Cow position:
               chr24:25112099-25111877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               27, 39
               

               Conread position:
               190-407
               

               Cow position:
               chr24:33723952-33724188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               190-501
               

               Cow position:
               chr24:31816482-31816155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               33, 51
               

               Conread position:
               190-503
               

               Cow position:
               chr24:39259060-39258738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               224
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               194-503
               

               Cow position:
               chr24:39607660-39607989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               203-358
               

               Cow position:
               chr24:29673397-29673243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               74, 22
               

               Conread position:
               203-504
               

               Cow position:
               chr24:17860378-17860675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               203, 16
               

               Conread position:
               208-373
               

               Cow position:
               chr24:27844646-27844811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               15, 34
               

               Conread position:
               208-500
               

               Cow position:
               chr24:42943248-42943544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 20
               

               Conread position:
               209-406
               

               Cow position:
               chr24:33526445-33526645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               58, 7
               

               Conread position:
               210-359
               

               Cow position:
               chr24:27229177-27229322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               65, 109
               

               Conread position:
               211-378
               

               Cow position:
               chr24:23685189-23685357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               217-502
               

               Cow position:
               chr24:36730366-36730076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               59, 113
               

               Conread position:
               217-503
               

               Cow position:
               chr24:45004822-45004530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               35, 67
               

               Conread position:
               218-371
               

               Cow position:
               chr24:15639032-15639189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               49, 124
               

               Conread position:
               221-359
               

               Cow position:
               chr24:28060564-28060703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               6, 118
               

               Conread position:
               221-410
               

               Cow position:
               chr24:33579332-33579137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               46, 7
               

               Conread position:
               222-379
               

               Cow position:
               chr24:8591203-8591041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               10, 120
               

               Conread position:
               240-375
               

               Cow position:
               chr24:36345039-36345170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               242-517
               

               Cow position:
               chr24:25991317-25991578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               184, 25
               

               Conread position:
               255-502
               

               Cow position:
               chr24:16267619-16267378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               210, 136
               

               Conread position:
               255-502
               

               Cow position:
               chr24:30545028-30545277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               22, 157
               

               Conread position:
               257-396
               

               Cow position:
               chr24:27629912-27630052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               263-402
               

               Cow position:
               chr24:31845630-31845771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               303-499
               

               Cow position:
               chr24:24457750-24457955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-374
               

               Cow position:
               chr25:28326979-28327360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               32-367
               

               Cow position:
               chr25:36513574-36513255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               59, 21
               

               Conread position:
               129-502
               

               Cow position:
               chr25:34236587-34236956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               33, 56
               

               Conread position:
               132-365
               

               Cow position:
               chr25:40957012-40957247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               62, 173
               

               Conread position:
               133-355
               

               Cow position:
               chr25:12234787-12235009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               86, 70
               

               Conread position:
               133-502
               

               Cow position:
               chr25:10012071-10012429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               267
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               63, 121
               

               Conread position:
               142-401
               

               Cow position:
               chr25:18453095-18452827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               46, 87
               

               Conread position:
               143-373
               

               Cow position:
               chr25:18206338-18206568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               8, 14
               

               Conread position:
               156-372
               

               Cow position:
               chr25:25051429-25051652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               38, 42
               

               Conread position:
               157-348
               

               Cow position:
               chr25:30035497-30035304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               46, 33
               

               Conread position:
               160-497
               

               Cow position:
               chr25:26757384-26757060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               34, 54
               

               Conread position:
               162-502
               

               Cow position:
               chr25:12081384-12081729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               114, 9
               

               Conread position:
               168-379
               

               Cow position:
               chr25:5837026-5837241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 53
               

               Conread position:
               188-380
               

               Cow position:
               chr25:33260657-33260464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               6, 34
               

               Conread position:
               188-502
               

               Cow position:
               chr25:24136516-24136819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               7, 146
               

               Conread position:
               190-501
               

               Cow position:
               chr25:24405819-24406144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 269
               

               Conread position:
               191-501
               

               Cow position:
               chr25:5567820-5568135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               76, 8
               

               Conread position:
               192-356
               

               Cow position:
               chr25:23410577-23410411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               203-401
               

               Cow position:
               chr25:24452268-24452465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               73, 17
               

               Conread position:
               207-363
               

               Cow position:
               chr25:31586941-31586780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 44
               

               Conread position:
               208-373
               

               Cow position:
               chr25:21245710-21245875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               68, 129
               

               Conread position:
               208-376
               

               Cow position:
               chr25:18934974-18935147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               12, 96
               

               Conread position:
               208-504
               

               Cow position:
               chr25:24302339-24302632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               19, 130
               

               Conread position:
               216-470
               

               Cow position:
               chr25:11131470-11131211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               60, 119
               

               Conread position:
               216-502
               

               Cow position:
               chr25:38135636-38135352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               61, 52
               

               Conread position:
               221-377
               

               Cow position:
               chr25:22909959-22910117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               6, 117
               

               Conread position:
               222-359
               

               Cow position:
               chr25:7306185-7306043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               222-359
               

               Cow position:
               chr25:26238754-26238616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               222-367
               

               Cow position:
               chr25:9842887-9842737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               50, 86
               

               Conread position:
               222-462
               

               Cow position:
               chr25:36036897-36037125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               54, 163
               

               Conread position:
               222-503
               

               Cow position:
               chr25:16691403-16691128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               43, 155
               

               Conread position:
               227-503
               

               Cow position:
               chr25:24168023-24168306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               40, 110
               

               Conread position:
               228-372
               

               Cow position:
               chr25:3992671-3992522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               39, 92
               

               Conread position:
               237-503
               

               Cow position:
               chr25:18425193-18424913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               11, 59
               

               Conread position:
               255-377
               

               Cow position:
               chr25:37006834-37006957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               255-501
               

               Cow position:
               chr25:27510381-27510633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 60
               

               Conread position:
               255-502
               

               Cow position:
               chr25:13940860-13941108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               21, 14
               

               Conread position:
               256-502
               

               Cow position:
               chr25:37594263-37594022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               21, 136
               

               Conread position:
               261-503
               

               Cow position:
               chr25:13443756-13444009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               15, 131
               

               Conread position:
               272-503
               

               Cow position:
               chr25:20007980-20007744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               8, 133
               

               Conread position:
               1-150
               

               Cow position:
               chr26:7655666-7655821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               1-154
               

               Cow position:
               chr26:18279861-18279703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               85, 52
               

               Conread position:
               1-375
               

               Cow position:
               chr26:17605225-17604847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               175, 10
               

               Conread position:
               2-202
               

               Cow position:
               chr26:2605930-2606137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               27, 53
               

               Conread position:
               85-358
               

               Cow position:
               chr26:17145133-17145425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               60, 272
               

               Conread position:
               112-502
               

               Cow position:
               chr26:34032111-34031730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               271
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               45, 67
               

               Conread position:
               127-501
               

               Cow position:
               chr26:17675729-17676121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               267
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               31, 19
               

               Conread position:
               129-379
               

               Cow position:
               chr26:2246952-2246692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               133-354
               

               Cow position:
               chr26:9666415-9666638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               12, 130
               

               Conread position:
               138-502
               

               Cow position:
               chr26:5552992-5552633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               259
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               11, 58
               

               Conread position:
               142-359
               

               Cow position:
               chr26:12669183-12668964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               14, 82
               

               Conread position:
               145-381
               

               Cow position:
               chr26:14080691-14080459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               191, 50
               

               Conread position:
               155-341
               

               Cow position:
               chr26:17992457-17992642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               113, 48
               

               Conread position:
               155-373
               

               Cow position:
               chr26:7103060-7103287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               155-375
               

               Cow position:
               chr26:29353535-29353764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               155-387
               

               Cow position:
               chr26:2769869-2770100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               48, 134
               

               Conread position:
               155-389
               

               Cow position:
               chr26:19769113-19769351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               39, 67
               

               Conread position:
               155-503
               

               Cow position:
               chr26:1674027-1673667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               255
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               37, 74
               

               Conread position:
               156-359
               

               Cow position:
               chr26:12069585-12069388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               156-365
               

               Cow position:
               chr26:8277596-8277814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               156-502
               

               Cow position:
               chr26:14924453-14924108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               47, 64
               

               Conread position:
               157-378
               

               Cow position:
               chr26:5685418-5685190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               34, 142
               

               Conread position:
               160-369
               

               Cow position:
               chr26:6323631-6323419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               59, 41
               

               Conread position:
               160-449
               

               Cow position:
               chr26:6828136-6827832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               167-503
               

               Cow position:
               chr26:4747896-4748235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               240
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               27, 175
               

               Conread position:
               184-359
               

               Cow position:
               chr26:18719173-18718997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               188-501
               

               Cow position:
               chr26:22622919-22622580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               242
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               32, 9
               

               Conread position:
               188-516
               

               Cow position:
               chr26:10491725-10491396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               234
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               6, 225
               

               Conread position:
               203-373
               

               Cow position:
               chr26:30751944-30752114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               74, 18
               

               Conread position:
               208-357
               

               Cow position:
               chr26:4397192-4397047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               127, 9
               

               Conread position:
               214-455
               

               Cow position:
               chr26:12216758-12216516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               5, 40
               

               Conread position:
               214-503
               

               Cow position:
               chr26:2408801-2409098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 11
               

               Conread position:
               218-353
               

               Cow position:
               chr26:20129765-20129905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               221-367
               

               Cow position:
               chr26:4293124-4293264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               221-407
               

               Cow position:
               chr26:5394569-5394375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               49, 81
               

               Conread position:
               222-502
               

               Cow position:
               chr26:26665851-26666140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               47, 117
               

               Conread position:
               223-371
               

               Cow position:
               chr26:12655006-12654857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               235-454
               

               Cow position:
               chr26:16921834-16921598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               246-502
               

               Cow position:
               chr26:12125426-12125673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               31, 36
               

               Conread position:
               246-502
               

               Cow position:
               chr26:33011790-33012024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               228, 40
               

               Conread position:
               1-150
               

               Cow position:
               chr27:7094146-7094292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               137, 52
               

               Conread position:
               7-502
               

               Cow position:
               chr27:20120291-20120795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               527
               

               Alignm identity:
               355
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               84, 22
               

               Conread position:
               32-367
               

               Cow position:
               chr27:11724043-11723687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               59, 28
               

               Conread position:
               128-503
               

               Cow position:
               chr27:15200676-15201057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               134-373
               

               Cow position:
               chr27:26441080-26440835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               60, 210
               

               Conread position:
               143-375
               

               Cow position:
               chr27:29019763-29019521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               145-356
               

               Cow position:
               chr27:13860742-13860536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               11, 37
               

               Conread position:
               149-375
               

               Cow position:
               chr27:22179790-22179572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               154-402
               

               Cow position:
               chr27:11762733-11762487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               41, 59
               

               Conread position:
               155-368
               

               Cow position:
               chr27:30560916-30561130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               50, 42
               

               Conread position:
               155-502
               

               Cow position:
               chr27:12241031-12240689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 60
               

               Conread position:
               157-358
               

               Cow position:
               chr27:29038935-29038732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               46, 60
               

               Conread position:
               162-501
               

               Cow position:
               chr27:20765945-20765620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               115, 19
               

               Conread position:
               167-425
               

               Cow position:
               chr27:19577688-19577948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 173
               

               Conread position:
               167-501
               

               Cow position:
               chr27:25676240-25676593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 23
               

               Conread position:
               167-502
               

               Cow position:
               chr27:10307288-10306946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               17, 242
               

               Conread position:
               204-374
               

               Cow position:
               chr27:1998191-1998361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               72, 16
               

               Conread position:
               204-406
               

               Cow position:
               chr27:19543852-19543653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               204-502
               

               Cow position:
               chr27:6523098-6523385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               72, 16
               

               Conread position:
               208-359
               

               Cow position:
               chr27:4508513-4508662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               15, 97
               

               Conread position:
               208-503
               

               Cow position:
               chr27:2847949-2848246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               9, 91
               

               Conread position:
               214-502
               

               Cow position:
               chr27:28685206-28685491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               192, 122
               

               Conread position:
               217-353
               

               Cow position:
               chr27:31267216-31267077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               217-357
               

               Cow position:
               chr27:13847705-13847846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               217-376
               

               Cow position:
               chr27:4664538-4664696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               59, 36
               

               Conread position:
               217-502
               

               Cow position:
               chr27:25471202-25471489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               49, 138
               

               Conread position:
               221-359
               

               Cow position:
               chr27:630391-630530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               221-359
               

               Cow position:
               chr27:16784826-16784963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               55, 28
               

               Conread position:
               221-359
               

               Cow position:
               chr27:22518699-22518837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               36, 63
               

               Conread position:
               221-372
               

               Cow position:
               chr27:12650560-12650407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               55, 146
               

               Conread position:
               221-406
               

               Cow position:
               chr27:13921742-13921556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               58, 7
               

               Conread position:
               221-502
               

               Cow position:
               chr27:21578532-21578242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               221-518
               

               Cow position:
               chr27:30446271-30446566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               112, 54
               

               Conread position:
               240-377
               

               Cow position:
               chr27:13696428-13696290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               31, 131
               

               Conread position:
               248-502
               

               Cow position:
               chr27:4295333-4295084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               38, 140
               

               Conread position:
               255-465
               

               Cow position:
               chr27:29860808-29860601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               14, 80
               

               Conread position:
               263-502
               

               Cow position:
               chr27:6641337-6641586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               187
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               272-500
               

               Cow position:
               chr27:12112613-12112388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 145
               

               Conread position:
               300-504
               

               Cow position:
               chr27:7648415-7648202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               61, 35
               

               Conread position:
               1-397
               

               Cow position:
               chr28:29077711-29077290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               291
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               81, 36
               

               Conread position:
               32-502
               

               Cow position:
               chr28:22081668-22081178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 21
               

               Conread position:
               52-415
               

               Cow position:
               chr28:25797190-25796812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               8, 13
               

               Conread position:
               97-502
               

               Cow position:
               chr28:11380022-11380430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               282
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               29, 22
               

               Conread position:
               113-502
               

               Cow position:
               chr28:7607235-7606841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               35, 7
               

               Conread position:
               125-373
               

               Cow position:
               chr28:16441370-16441126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               54, 26
               

               Conread position:
               135-373
               

               Cow position:
               chr28:3914691-3914449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               59, 204
               

               Conread position:
               138-513
               

               Cow position:
               chr28:15689017-15688642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               260
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               139-373
               

               Cow position:
               chr28:5805486-5805264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               7, 18
               

               Conread position:
               143-358
               

               Cow position:
               chr28:6486565-6486347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               51, 17
               

               Conread position:
               148-504
               

               Cow position:
               chr28:20265355-20265006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               149-392
               

               Cow position:
               chr28:2340500-2340251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               8, 17
               

               Conread position:
               155-367
               

               Cow position:
               chr28:31971795-31972002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               34, 122
               

               Conread position:
               155-415
               

               Cow position:
               chr28:28414633-28414367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               51, 186
               

               Conread position:
               155-423
               

               Cow position:
               chr28:14218515-14218789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               40, 141
               

               Conread position:
               156-327
               

               Cow position:
               chr28:21940156-21939980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               47, 25
               

               Conread position:
               156-353
               

               Cow position:
               chr28:10456574-10456763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               120, 25
               

               Conread position:
               156-502
               

               Cow position:
               chr28:21873729-21873381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 79
               

               Conread position:
               163-373
               

               Cow position:
               chr28:31871801-31872008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               8, 19
               

               Conread position:
               167-356
               

               Cow position:
               chr28:16109884-16109700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               110, 32
               

               Conread position:
               169-503
               

               Cow position:
               chr28:34150581-34150904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               37, 199
               

               Conread position:
               182-502
               

               Cow position:
               chr28:19079916-19080238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               80, 21
               

               Conread position:
               187-359
               

               Cow position:
               chr28:15272335-15272508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               61, 53
               

               Conread position:
               187-359
               

               Cow position:
               chr28:25334952-25334773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               187-367
               

               Cow position:
               chr28:10642094-10642274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               89, 13
               

               Conread position:
               190-356
               

               Cow position:
               chr28:13902040-13902203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               86, 16
               

               Conread position:
               191-359
               

               Cow position:
               chr28:22583556-22583385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               33, 150
               

               Conread position:
               201-373
               

               Cow position:
               chr28:13356680-13356846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               201-375
               

               Cow position:
               chr28:22351411-22351230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               201-502
               

               Cow position:
               chr28:31415515-31415826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 135
               

               Conread position:
               203-359
               

               Cow position:
               chr28:16475908-16475748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               16, 137
               

               Conread position:
               208-359
               

               Cow position:
               chr28:2905486-2905333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               208-380
               

               Cow position:
               chr28:5773542-5773374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               69, 12
               

               Conread position:
               208-388
               

               Cow position:
               chr28:13176772-13176955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               64, 12
               

               Conread position:
               208-401
               

               Cow position:
               chr28:4841486-4841686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               9, 154
               

               Conread position:
               209-505
               

               Cow position:
               chr28:12864940-12864643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               20, 136
               

               Conread position:
               217-353
               

               Cow position:
               chr28:16686926-16686791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               59, 50
               

               Conread position:
               217-359
               

               Cow position:
               chr28:30978173-30978035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               217-371
               

               Cow position:
               chr28:7697107-7697261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               59, 100
               

               Conread position:
               217-376
               

               Cow position:
               chr28:5255645-5255486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               59, 43
               

               Conread position:
               218-359
               

               Cow position:
               chr28:29455762-29455904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               218-380
               

               Cow position:
               chr28:28590633-28590471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               60, 119
               

               Conread position:
               221-359
               

               Cow position:
               chr28:13936307-13936169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               56, 7
               

               Conread position:
               221-503
               

               Cow position:
               chr28:23793411-23793688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               56, 117
               

               Conread position:
               221-503
               

               Cow position:
               chr28:25315089-25314812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               58, 140
               

               Conread position:
               222-393
               

               Cow position:
               chr28:2862756-2862580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               242-503
               

               Cow position:
               chr28:1537576-1537312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               35, 13
               

               Conread position:
               253-503
               

               Cow position:
               chr28:3820313-3820558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               79, 65
               

               Conread position:
               267-500
               

               Cow position:
               chr28:19961755-19961523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               9, 34
               

               Conread position:
               273-503
               

               Cow position:
               chr28:32747777-32747546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               149, 30
               

               Conread position:
               277-501
               

               Cow position:
               chr28:27428587-27428356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               299-503
               

               Cow position:
               chr28:14721007-14721208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               111, 10
               

               Conread position:
               1-348
               

               Cow position:
               chr29:19744032-19744376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               90, 52
               

               Conread position:
               1-359
               

               Cow position:
               chr29:27033040-27032683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               258
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               28, 53
               

               Conread position:
               14-359
               

               Cow position:
               chr29:20538316-20538655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               72, 39
               

               Conread position:
               97-353
               

               Cow position:
               chr29:16359632-16359365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               16, 29
               

               Conread position:
               112-359
               

               Cow position:
               chr29:650274-650020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               82, 37
               

               Conread position:
               121-359
               

               Cow position:
               chr29:7749891-7750128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               53, 28
               

               Conread position:
               128-503
               

               Cow position:
               chr29:26224313-26223957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               27, 75
               

               Conread position:
               130-359
               

               Cow position:
               chr29:13554114-13553878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               18, 12
               

               Conread position:
               134-502
               

               Cow position:
               chr29:478078-477688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               273
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               60, 37
               

               Conread position:
               134-503
               

               Cow position:
               chr29:16083108-16082742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               267
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               17, 188
               

               Conread position:
               142-342
               

               Cow position:
               chr29:17339338-17339534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               134, 53
               

               Conread position:
               152-501
               

               Cow position:
               chr29:2588943-2589273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               240
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               19, 30
               

               Conread position:
               155-384
               

               Cow position:
               chr29:26129454-26129220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               51, 21
               

               Conread position:
               155-501
               

               Cow position:
               chr29:94601-94941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               247
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               122, 85
               

               Conread position:
               155-503
               

               Cow position:
               chr29:18521069-18521421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 21
               

               Conread position:
               156-373
               

               Cow position:
               chr29:18338589-18338814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               38, 216
               

               Conread position:
               156-393
               

               Cow position:
               chr29:6472267-6472027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               38, 52
               

               Conread position:
               156-483
               

               Cow position:
               chr29:295870-296183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               38, 61
               

               Conread position:
               156-497
               

               Cow position:
               chr29:30812700-30812360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 66
               

               Conread position:
               156-503
               

               Cow position:
               chr29:42268647-42268279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               253
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               32, 298
               

               Conread position:
               157-401
               

               Cow position:
               chr29:21925161-21924914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               46, 183
               

               Conread position:
               167-502
               

               Cow position:
               chr29:798515-798867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               43, 30
               

               Conread position:
               169-353
               

               Cow position:
               chr29:34757965-34757782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               25, 33
               

               Conread position:
               177-507
               

               Cow position:
               chr29:32655496-32655820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               240
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               17, 28
               

               Conread position:
               182-401
               

               Cow position:
               chr29:18695177-18694961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               96, 22
               

               Conread position:
               185-359
               

               Cow position:
               chr29:13040632-13040806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               13, 20
               

               Conread position:
               185-359
               

               Cow position:
               chr29:15940711-15940892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               185-359
               

               Cow position:
               chr29:38760238-38760411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               11, 36
               

               Conread position:
               186-460
               

               Cow position:
               chr29:16663005-16662725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               17, 83
               

               Conread position:
               201-503
               

               Cow position:
               chr29:2885546-2885866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               13, 68
               

               Conread position:
               203-401
               

               Cow position:
               chr29:12784056-12784252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               75, 17
               

               Conread position:
               204-471
               

               Cow position:
               chr29:254987-254717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 8
               

               Conread position:
               208-373
               

               Cow position:
               chr29:40337628-40337792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 87
               

               Conread position:
               208-375
               

               Cow position:
               chr29:19601443-19601607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               50, 12
               

               Conread position:
               208-503
               

               Cow position:
               chr29:32809362-32809053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               56, 135
               

               Conread position:
               217-359
               

               Cow position:
               chr29:7972149-7972291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               12, 51
               

               Conread position:
               217-383
               

               Cow position:
               chr29:22339324-22339491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               59, 152
               

               Conread position:
               217-385
               

               Cow position:
               chr29:9938181-9938351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               59, 135
               

               Conread position:
               221-373
               

               Cow position:
               chr29:28280646-28280798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               55, 116
               

               Conread position:
               221-497
               

               Cow position:
               chr29:7051843-7051564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               42, 122
               

               Conread position:
               222-371
               

               Cow position:
               chr29:37719793-37719646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               54, 15
               

               Conread position:
               236-365
               

               Cow position:
               chr29:22948789-22948922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               36, 103
               

               Conread position:
               236-502
               

               Cow position:
               chr29:19338853-19338585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               36, 156
               

               Conread position:
               236-509
               

               Cow position:
               chr29:8070671-8070386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               13, 55
               

               Conread position:
               238-472
               

               Cow position:
               chr29:3487872-3487641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               33, 18
               

               Conread position:
               238-503
               

               Cow position:
               chr29:38932727-38933001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               29, 101
               

               Conread position:
               255-381
               

               Cow position:
               chr29:22332634-22332762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               257-502
               

               Cow position:
               chr29:41182866-41183114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               19, 88
               

               Conread position:
               261-489
               

               Cow position:
               chr29:41076183-41076424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               332-502
               

               Cow position:
               chr29:10153988-10154157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               26, 32
               

               Conread position:
               1-359
               

               Cow position:
               chr3:24276796-24276431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 13
               

               Conread position:
               2-500
               

               Cow position:
               chr3:53415284-53414785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               525
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 15
               

               Conread position:
               37-375
               

               Cow position:
               chr3:82165608-82165927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               86, 16
               

               Conread position:
               53-342
               

               Cow position:
               chr3:17726233-17725928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               38, 264
               

               Conread position:
               63-502
               

               Cow position:
               chr3:65580987-65581431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 66
               

               Conread position:
               78-346
               

               Cow position:
               chr3:37007074-37007363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               13, 99
               

               Conread position:
               91-371
               

               Cow position:
               chr3:40345405-40345112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               5, 62
               

               Conread position:
               97-493
               

               Cow position:
               chr3:51255777-51255386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               268
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               47, 24
               

               Conread position:
               99-359
               

               Cow position:
               chr3:73443102-73443363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               11, 45
               

               Conread position:
               113-501
               

               Cow position:
               chr3:60854865-60855258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 37
               

               Conread position:
               120-359
               

               Cow position:
               chr3:26493253-26493500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               26, 43
               

               Conread position:
               125-367
               

               Cow position:
               chr3:34315994-34316248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               132-369
               

               Cow position:
               chr3:27532703-27532948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               133-359
               

               Cow position:
               chr3:56703902-56704130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               61, 21
               

               Conread position:
               133-373
               

               Cow position:
               chr3:11949405-11949643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 18
               

               Conread position:
               133-502
               

               Cow position:
               chr3:54862462-54862845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               272
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               70, 100
               

               Conread position:
               134-387
               

               Cow position:
               chr3:23945050-23944793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               17, 39
               

               Conread position:
               134-503
               

               Cow position:
               chr3:32870101-32869723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 137
               

               Conread position:
               136-359
               

               Cow position:
               chr3:17284794-17284560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               57, 19
               

               Conread position:
               139-502
               

               Cow position:
               chr3:56430-56789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               249
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               55, 78
               

               Conread position:
               141-401
               

               Cow position:
               chr3:77467881-77467614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               14, 8
               

               Conread position:
               142-359
               

               Cow position:
               chr3:68583061-68583278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               52, 13
               

               Conread position:
               142-364
               

               Cow position:
               chr3:54946072-54945844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               70, 195
               

               Conread position:
               142-501
               

               Cow position:
               chr3:43007456-43007818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               258
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               80, 32
               

               Conread position:
               143-357
               

               Cow position:
               chr3:32596983-32597202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               143-459
               

               Cow position:
               chr3:67744683-67745004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 70
               

               Conread position:
               144-359
               

               Cow position:
               chr3:32399313-32399531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               50, 114
               

               Conread position:
               144-502
               

               Cow position:
               chr3:17936900-17937248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               258
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               60, 16
               

               Conread position:
               144-502
               

               Cow position:
               chr3:48629651-48630010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               50, 99
               

               Conread position:
               154-386
               

               Cow position:
               chr3:56637600-56637363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               154-502
               

               Cow position:
               chr3:33327637-33327297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               237
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               40, 44
               

               Conread position:
               155-359
               

               Cow position:
               chr3:33632961-33633162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               64, 46
               

               Conread position:
               155-362
               

               Cow position:
               chr3:17757013-17757224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               40, 149
               

               Conread position:
               155-367
               

               Cow position:
               chr3:58285968-58286182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               48, 34
               

               Conread position:
               155-369
               

               Cow position:
               chr3:36100766-36100542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               155-372
               

               Cow position:
               chr3:66116180-66116401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               155-410
               

               Cow position:
               chr3:8457585-8457332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               112, 50
               

               Conread position:
               156-339
               

               Cow position:
               chr3:3690793-3690980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               31, 48
               

               Conread position:
               156-502
               

               Cow position:
               chr3:38497873-38497547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               60, 29
               

               Conread position:
               157-359
               

               Cow position:
               chr3:42563379-42563174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               14, 34
               

               Conread position:
               159-359
               

               Cow position:
               chr3:42461628-42461424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               47, 76
               

               Conread position:
               163-373
               

               Cow position:
               chr3:23678470-23678679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               24, 14
               

               Conread position:
               163-502
               

               Cow position:
               chr3:64281018-64281356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               104, 9
               

               Conread position:
               164-502
               

               Cow position:
               chr3:29596313-29595975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               53, 30
               

               Conread position:
               167-359
               

               Cow position:
               chr3:55460577-55460777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               27, 19
               

               Conread position:
               167-371
               

               Cow position:
               chr3:77225034-77224832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               27, 56
               

               Conread position:
               167-502
               

               Cow position:
               chr3:56102355-56102015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 48
               

               Conread position:
               168-414
               

               Cow position:
               chr3:74699473-74699727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               26, 149
               

               Conread position:
               176-501
               

               Cow position:
               chr3:13329868-13330190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               18, 66
               

               Conread position:
               177-501
               

               Cow position:
               chr3:66964391-66964711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               180-497
               

               Cow position:
               chr3:46345112-46345415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               58, 17
               

               Conread position:
               182-393
               

               Cow position:
               chr3:42594755-42594967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               86, 39
               

               Conread position:
               182-504
               

               Cow position:
               chr3:84153224-84152916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               232
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               94, 38
               

               Conread position:
               183-503
               

               Cow position:
               chr3:58383865-58383564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               219
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               14, 20
               

               Conread position:
               184-388
               

               Cow position:
               chr3:44861405-44861613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               36, 17
               

               Conread position:
               185-383
               

               Cow position:
               chr3:73236668-73236470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               11, 31
               

               Conread position:
               188-359
               

               Cow position:
               chr3:48371027-48370855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               84, 13
               

               Conread position:
               188-374
               

               Cow position:
               chr3:8753365-8753173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               6, 14
               

               Conread position:
               189-359
               

               Cow position:
               chr3:1498766-1498594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               78, 19
               

               Conread position:
               190-503
               

               Cow position:
               chr3:58865564-58865870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               13, 74
               

               Conread position:
               191-387
               

               Cow position:
               chr3:27347408-27347605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 127
               

               Conread position:
               192-503
               

               Cow position:
               chr3:23496669-23496977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               75, 10
               

               Conread position:
               193-383
               

               Cow position:
               chr3:66649545-66649742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               28, 11
               

               Conread position:
               196-359
               

               Cow position:
               chr3:56125642-56125471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               197-359
               

               Cow position:
               chr3:16622139-16622304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               74, 108
               

               Conread position:
               198-501
               

               Cow position:
               chr3:42914340-42914028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 9
               

               Conread position:
               201-369
               

               Cow position:
               chr3:40231814-40231643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               66, 13
               

               Conread position:
               202-359
               

               Cow position:
               chr3:74849156-74849314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               21, 136
               

               Conread position:
               203-489
               

               Cow position:
               chr3:5097084-5096799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               74, 65
               

               Conread position:
               203-502
               

               Cow position:
               chr3:48275711-48275401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               33, 137
               

               Conread position:
               204-401
               

               Cow position:
               chr3:54050139-54050337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               59, 84
               

               Conread position:
               204-401
               

               Cow position:
               chr3:59333649-59333457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               54, 16
               

               Conread position:
               204-410
               

               Cow position:
               chr3:17957342-17957136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               157, 72
               

               Conread position:
               208-359
               

               Cow position:
               chr3:54909439-54909288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               71, 29
               

               Conread position:
               208-377
               

               Cow position:
               chr3:52722123-52722291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 45
               

               Conread position:
               208-396
               

               Cow position:
               chr3:15158918-15158728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               208-397
               

               Cow position:
               chr3:63179739-63179554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               9, 33
               

               Conread position:
               208-503
               

               Cow position:
               chr3:16886002-16886311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 18
               

               Conread position:
               208-503
               

               Cow position:
               chr3:39171606-39171902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               214
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               9, 156
               

               Conread position:
               208-503
               

               Cow position:
               chr3:73467501-73467189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               12, 101
               

               Conread position:
               210-359
               

               Cow position:
               chr3:23478111-23477959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               217-386
               

               Cow position:
               chr3:71104711-71104540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               52, 9
               

               Conread position:
               218-373
               

               Cow position:
               chr3:75143166-75143322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               219-359
               

               Cow position:
               chr3:37580449-37580600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               221-370
               

               Cow position:
               chr3:3096486-3096634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               221-387
               

               Cow position:
               chr3:55815204-55815040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               55, 19
               

               Conread position:
               221-389
               

               Cow position:
               chr3:76285313-76285479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 114
               

               Conread position:
               221-402
               

               Cow position:
               chr3:23471600-23471789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               222-391
               

               Cow position:
               chr3:19006525-19006359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               54, 35
               

               Conread position:
               222-401
               

               Cow position:
               chr3:72018776-72018593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               49, 119
               

               Conread position:
               222-464
               

               Cow position:
               chr3:78945971-78946214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               53, 93
               

               Conread position:
               236-384
               

               Cow position:
               chr3:49784159-49784010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               236-461
               

               Cow position:
               chr3:64679434-64679204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               30, 213
               

               Conread position:
               242-378
               

               Cow position:
               chr3:17681008-17680867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               242-502
               

               Cow position:
               chr3:52816589-52816332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               190
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               231, 34
               

               Conread position:
               251-527
               

               Cow position:
               chr3:73956859-73956581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 190
               

               Conread position:
               253-502
               

               Cow position:
               chr3:16890567-16890318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               10, 126
               

               Conread position:
               257-390
               

               Cow position:
               chr3:63203273-63203138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               258-504
               

               Cow position:
               chr3:36085932-36086192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               267-513
               

               Cow position:
               chr3:45744530-45744264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               201
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               9, 258
               

               Conread position:
               303-493
               

               Cow position:
               chr3:27867641-27867443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               58, 179
               

               Conread position:
               303-503
               

               Cow position:
               chr3:1483996-1483796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               114, 100
               

               Conread position:
               1-359
               

               Cow position:
               chr4:30960614-30960258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 36
               

               Conread position:
               1-501
               

               Cow position:
               chr4:21057291-21056808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               506
               

               Alignm identity:
               322
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               26, 54
               

               Conread position:
               33-374
               

               Cow position:
               chr4:37955053-37955416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               251
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               59, 330
               

               Conread position:
               85-366
               

               Cow position:
               chr4:62954052-62953748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               63, 199
               

               Conread position:
               97-359
               

               Cow position:
               chr4:41867449-41867184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               13, 46
               

               Conread position:
               97-381
               

               Cow position:
               chr4:28772061-28772349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               16, 72
               

               Conread position:
               109-469
               

               Cow position:
               chr4:5623211-5623551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               85, 8
               

               Conread position:
               120-402
               

               Cow position:
               chr4:6630311-6630596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               39, 103
               

               Conread position:
               120-454
               

               Cow position:
               chr4:9714712-9714365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               64, 35
               

               Conread position:
               121-365
               

               Cow position:
               chr4:13818452-13818697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               116, 28
               

               Conread position:
               121-371
               

               Cow position:
               chr4:23536230-23535975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               74, 28
               

               Conread position:
               121-371
               

               Cow position:
               chr4:61720894-61721145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               71, 28
               

               Conread position:
               125-359
               

               Cow position:
               chr4:32726203-32725964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               69, 217
               

               Conread position:
               125-503
               

               Cow position:
               chr4:22115586-22115209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               264
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               31, 242
               

               Conread position:
               128-358
               

               Cow position:
               chr4:12913820-12914060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               29, 14
               

               Conread position:
               129-373
               

               Cow position:
               chr4:23600150-23599896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 93
               

               Conread position:
               133-359
               

               Cow position:
               chr4:31172645-31172406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               138-406
               

               Cow position:
               chr4:33030513-33030250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               18, 11
               

               Conread position:
               142-367
               

               Cow position:
               chr4:14159166-14159392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               42, 135
               

               Conread position:
               143-351
               

               Cow position:
               chr4:17176122-17175914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               14, 6
               

               Conread position:
               143-402
               

               Cow position:
               chr4:6792395-6792139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 6
               

               Conread position:
               146-359
               

               Cow position:
               chr4:20562571-20562356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               70, 14
               

               Conread position:
               151-482
               

               Cow position:
               chr4:62570763-62570433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 32
               

               Conread position:
               155-359
               

               Cow position:
               chr4:27561344-27561136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               155-422
               

               Cow position:
               chr4:46082945-46083224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               56, 10
               

               Conread position:
               155-503
               

               Cow position:
               chr4:48499784-48499450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               65, 40
               

               Conread position:
               156-358
               

               Cow position:
               chr4:65919559-65919359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               35, 120
               

               Conread position:
               156-359
               

               Cow position:
               chr4:51408027-51408225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 65
               

               Conread position:
               156-395
               

               Cow position:
               chr4:32749148-32748899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               156-502
               

               Cow position:
               chr4:11389591-11389960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               59, 187
               

               Conread position:
               156-503
               

               Cow position:
               chr4:49885365-49885705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               69, 11
               

               Conread position:
               156-509
               

               Cow position:
               chr4:45114659-45115015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 239
               

               Conread position:
               157-359
               

               Cow position:
               chr4:53763178-53763379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               46, 21
               

               Conread position:
               162-365
               

               Cow position:
               chr4:30690652-30690458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               115, 9
               

               Conread position:
               162-369
               

               Cow position:
               chr4:4321069-4321276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               113, 9
               

               Conread position:
               162-502
               

               Cow position:
               chr4:44072833-44073193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               261
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               9, 20
               

               Conread position:
               162-514
               

               Cow position:
               chr4:11021723-11022069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               173, 9
               

               Conread position:
               165-379
               

               Cow position:
               chr4:15623780-15623564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               29, 11
               

               Conread position:
               167-367
               

               Cow position:
               chr4:46668502-46668302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 54
               

               Conread position:
               177-357
               

               Cow position:
               chr4:44782298-44782116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               182-401
               

               Cow position:
               chr4:46591579-46591360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               85, 22
               

               Conread position:
               183-401
               

               Cow position:
               chr4:19542710-19542494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               94, 21
               

               Conread position:
               184-359
               

               Cow position:
               chr4:61271717-61271893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               88, 36
               

               Conread position:
               186-359
               

               Cow position:
               chr4:36813285-36813112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               66, 15
               

               Conread position:
               186-367
               

               Cow position:
               chr4:2141655-2141478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               94, 17
               

               Conread position:
               186-502
               

               Cow position:
               chr4:59129733-59130044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               23, 35
               

               Conread position:
               187-502
               

               Cow position:
               chr4:36755661-36755342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 34
               

               Conread position:
               190-502
               

               Cow position:
               chr4:28789214-28789531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               86, 22
               

               Conread position:
               190-503
               

               Cow position:
               chr4:52225915-52225604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               223
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               60, 27
               

               Conread position:
               195-353
               

               Cow position:
               chr4:58433299-58433465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               196-359
               

               Cow position:
               chr4:47773734-47773892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               198-393
               

               Cow position:
               chr4:4300445-4300245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               10, 20
               

               Conread position:
               199-373
               

               Cow position:
               chr4:29527270-29527447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               9, 166
               

               Conread position:
               203-359
               

               Cow position:
               chr4:15904992-15904838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               73, 17
               

               Conread position:
               203-397
               

               Cow position:
               chr4:54930526-54930714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               87, 52
               

               Conread position:
               203-502
               

               Cow position:
               chr4:15462381-15462688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               74, 17
               

               Conread position:
               205-401
               

               Cow position:
               chr4:51122949-51122755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               73, 15
               

               Conread position:
               208-359
               

               Cow position:
               chr4:36731087-36730930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               208-372
               

               Cow position:
               chr4:38999317-38999154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               9, 34
               

               Conread position:
               208-503
               

               Cow position:
               chr4:51739816-51740122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               228
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               9, 52
               

               Conread position:
               213-502
               

               Cow position:
               chr4:3274647-3274944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               14, 46
               

               Conread position:
               214-359
               

               Cow position:
               chr4:16339707-16339852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               62, 123
               

               Conread position:
               216-503
               

               Cow position:
               chr4:3837167-3836881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               51, 149
               

               Conread position:
               217-358
               

               Cow position:
               chr4:42103978-42103837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               59, 120
               

               Conread position:
               218-373
               

               Cow position:
               chr4:22528506-22528661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               58, 119
               

               Conread position:
               218-490
               

               Cow position:
               chr4:24187732-24188006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               49, 147
               

               Conread position:
               220-376
               

               Cow position:
               chr4:59976427-59976579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               221-371
               

               Cow position:
               chr4:61399553-61399697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 46
               

               Conread position:
               221-393
               

               Cow position:
               chr4:5924645-5924817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               55, 16
               

               Conread position:
               221-398
               

               Cow position:
               chr4:59358555-59358734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               42, 28
               

               Conread position:
               221-503
               

               Cow position:
               chr4:29710155-29710424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               55, 140
               

               Conread position:
               222-502
               

               Cow position:
               chr4:19438338-19438064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               49, 177
               

               Conread position:
               222-502
               

               Cow position:
               chr4:51784056-51783790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               55, 31
               

               Conread position:
               236-501
               

               Cow position:
               chr4:13920234-13920499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               10, 164
               

               Conread position:
               254-502
               

               Cow position:
               chr4:34043903-34044160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 87
               

               Conread position:
               255-401
               

               Cow position:
               chr4:48172954-48172809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               22, 13
               

               Conread position:
               255-454
               

               Cow position:
               chr4:34630744-34630532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               106, 23
               

               Conread position:
               255-513
               

               Cow position:
               chr4:28094605-28094866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 63
               

               Conread position:
               258-503
               

               Cow position:
               chr4:46456208-46456456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               19, 43
               

               Conread position:
               260-375
               

               Cow position:
               chr4:33149678-33149562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               264-502
               

               Cow position:
               chr4:27287270-27287527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               13, 81
               

               Conread position:
               265-399
               

               Cow position:
               chr4:59105976-59106111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               267-401
               

               Cow position:
               chr4:11543084-11542949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               9, 72
               

               Conread position:
               1-369
               

               Cow position:
               chr5:51292587-51292964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               1-375
               

               Cow position:
               chr5:9083487-9083094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 26
               

               Conread position:
               1-501
               

               Cow position:
               chr5:50864506-50864010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               516
               

               Alignm identity:
               342
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               26, 68
               

               Conread position:
               1-503
               

               Cow position:
               chr5:7740140-7740665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               542
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               3-381
               

               Cow position:
               chr5:18842746-18842362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 52
               

               Conread position:
               9-359
               

               Cow position:
               chr5:44703466-44703115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               247
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               20, 46
               

               Conread position:
               12-371
               

               Cow position:
               chr5:31972617-31972980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               255
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               15, 49
               

               Conread position:
               18-359
               

               Cow position:
               chr5:57114101-57113753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 36
               

               Conread position:
               33-350
               

               Cow position:
               chr5:51314730-51315065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               60, 20
               

               Conread position:
               92-501
               

               Cow position:
               chr5:25225607-25226008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               287
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               24, 32
               

               Conread position:
               97-358
               

               Cow position:
               chr5:50263566-50263825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               70, 39
               

               Conread position:
               97-359
               

               Cow position:
               chr5:21828907-21828637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               13, 130
               

               Conread position:
               113-504
               

               Cow position:
               chr5:27615538-27615154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               11, 16
               

               Conread position:
               121-500
               

               Cow position:
               chr5:54557256-54556859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               262
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               70, 47
               

               Conread position:
               123-345
               

               Cow position:
               chr5:27904421-27904200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               25, 57
               

               Conread position:
               123-359
               

               Cow position:
               chr5:51076633-51076872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               11, 99
               

               Conread position:
               123-367
               

               Cow position:
               chr5:22934440-22934691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               83, 199
               

               Conread position:
               123-370
               

               Cow position:
               chr5:25927684-25927930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               22, 62
               

               Conread position:
               124-401
               

               Cow position:
               chr5:31784899-31784618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               23, 12
               

               Conread position:
               129-367
               

               Cow position:
               chr5:45940608-45940842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               89, 66
               

               Conread position:
               130-359
               

               Cow position:
               chr5:34638889-34638658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               79, 135
               

               Conread position:
               133-371
               

               Cow position:
               chr5:35209472-35209711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 76
               

               Conread position:
               140-375
               

               Cow position:
               chr5:61030228-61030472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               142-367
               

               Cow position:
               chr5:21547304-21547531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               74, 17
               

               Conread position:
               142-406
               

               Cow position:
               chr5:34921844-34922109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               131, 13
               

               Conread position:
               142-502
               

               Cow position:
               chr5:49479324-49478984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               238
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               113, 36
               

               Conread position:
               143-372
               

               Cow position:
               chr5:48238105-48238331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               14, 48
               

               Conread position:
               143-500
               

               Cow position:
               chr5:26046327-26045953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 198
               

               Conread position:
               144-484
               

               Cow position:
               chr5:50900891-50900543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               243
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               50, 77
               

               Conread position:
               155-359
               

               Cow position:
               chr5:27690079-27690286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               39, 63
               

               Conread position:
               155-359
               

               Cow position:
               chr5:41636850-41636646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               48, 126
               

               Conread position:
               155-502
               

               Cow position:
               chr5:40711457-40711800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               259
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               35, 133
               

               Conread position:
               155-502
               

               Cow position:
               chr5:55989727-55989363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               29, 133
               

               Conread position:
               156-351
               

               Cow position:
               chr5:39442273-39442073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               50, 25
               

               Conread position:
               156-359
               

               Cow position:
               chr5:6987142-6986931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               38, 60
               

               Conread position:
               156-359
               

               Cow position:
               chr5:57126992-57126788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               111, 49
               

               Conread position:
               156-406
               

               Cow position:
               chr5:56385209-56384953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               50, 155
               

               Conread position:
               156-500
               

               Cow position:
               chr5:3825066-3824729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 38
               

               Conread position:
               156-503
               

               Cow position:
               chr5:26562135-26561795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               38, 211
               

               Conread position:
               157-369
               

               Cow position:
               chr5:14154125-14153905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               37, 8
               

               Conread position:
               157-489
               

               Cow position:
               chr5:33467064-33467395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               236
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               37, 107
               

               Conread position:
               160-375
               

               Cow position:
               chr5:26099403-26099613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               124, 53
               

               Conread position:
               163-487
               

               Cow position:
               chr5:37713934-37714266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 8
               

               Conread position:
               165-502
               

               Cow position:
               chr5:42744758-42744421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               29, 113
               

               Conread position:
               167-502
               

               Cow position:
               chr5:32963663-32963993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               27, 18
               

               Conread position:
               168-512
               

               Cow position:
               chr5:39049419-39049065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               254
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               26, 47
               

               Conread position:
               175-472
               

               Cow position:
               chr5:19905315-19905612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               52, 39
               

               Conread position:
               178-401
               

               Cow position:
               chr5:6033197-6032965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               182-381
               

               Cow position:
               chr5:26099182-26098982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               12, 46
               

               Conread position:
               182-503
               

               Cow position:
               chr5:4032045-4032356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               244, 21
               

               Conread position:
               182-503
               

               Cow position:
               chr5:40356918-40357236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               90, 22
               

               Conread position:
               184-470
               

               Cow position:
               chr5:54530935-54530640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               5, 19
               

               Conread position:
               186-356
               

               Cow position:
               chr5:55985598-55985774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               187-501
               

               Cow position:
               chr5:3058622-3058324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               224
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               188-355
               

               Cow position:
               chr5:66280850-66281016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               89, 32
               

               Conread position:
               188-384
               

               Cow position:
               chr5:74358660-74358850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               190-359
               

               Cow position:
               chr5:34441847-34442019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               27, 68
               

               Conread position:
               190-501
               

               Cow position:
               chr5:40928031-40928350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               27, 126
               

               Conread position:
               193-359
               

               Cow position:
               chr5:14832672-14832835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               83, 11
               

               Conread position:
               195-359
               

               Cow position:
               chr5:68715772-68715606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               196-502
               

               Cow position:
               chr5:68481159-68480862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               81, 21
               

               Conread position:
               196-503
               

               Cow position:
               chr5:58548431-58548728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               80, 165
               

               Conread position:
               201-357
               

               Cow position:
               chr5:68082033-68082192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               201-424
               

               Cow position:
               chr5:4509434-4509197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               202-359
               

               Cow position:
               chr5:70608932-70608770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               18, 27
               

               Conread position:
               203-358
               

               Cow position:
               chr5:58856031-58855878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               74, 9
               

               Conread position:
               203-381
               

               Cow position:
               chr5:23234387-23234209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               24, 134
               

               Conread position:
               204-504
               

               Cow position:
               chr5:9498312-9498017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               214
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               222, 57
               

               Conread position:
               208-373
               

               Cow position:
               chr5:43474773-43474606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               208-502
               

               Cow position:
               chr5:28230080-28229779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 9
               

               Conread position:
               208-502
               

               Cow position:
               chr5:52438076-52437764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               228
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               208-513
               

               Cow position:
               chr5:53835639-53835335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               69, 148
               

               Conread position:
               212-359
               

               Cow position:
               chr5:41952886-41953031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               62, 108
               

               Conread position:
               214-503
               

               Cow position:
               chr5:48406642-48406929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               53, 110
               

               Conread position:
               215-402
               

               Cow position:
               chr5:42562701-42562895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               216-407
               

               Cow position:
               chr5:51360867-51360670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               216-433
               

               Cow position:
               chr5:34915070-34915292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               55, 32
               

               Conread position:
               216-502
               

               Cow position:
               chr5:34232664-34232381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               7, 149
               

               Conread position:
               216-503
               

               Cow position:
               chr5:1247193-1246891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               217-381
               

               Cow position:
               chr5:28035626-28035461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               217-405
               

               Cow position:
               chr5:23641077-23641264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               51, 63
               

               Conread position:
               218-385
               

               Cow position:
               chr5:56753641-56753474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               50, 112
               

               Conread position:
               218-406
               

               Cow position:
               chr5:17869621-17869439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               58, 107
               

               Conread position:
               218-502
               

               Cow position:
               chr5:1343940-1344231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               52, 142
               

               Conread position:
               221-379
               

               Cow position:
               chr5:65325952-65325793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               221-383
               

               Cow position:
               chr5:68604770-68604608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               56, 116
               

               Conread position:
               221-391
               

               Cow position:
               chr5:26541204-26541037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               56, 41
               

               Conread position:
               221-502
               

               Cow position:
               chr5:30332852-30332588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               55, 32
               

               Conread position:
               221-503
               

               Cow position:
               chr5:72042135-72041863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               46, 28
               

               Conread position:
               221-526
               

               Cow position:
               chr5:364654-364951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               49, 150
               

               Conread position:
               222-407
               

               Cow position:
               chr5:24837035-24837215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               55, 115
               

               Conread position:
               222-460
               

               Cow position:
               chr5:37814534-37814283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               58, 27
               

               Conread position:
               222-502
               

               Cow position:
               chr5:34923202-34923473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               55, 45
               

               Conread position:
               222-508
               

               Cow position:
               chr5:32815819-32815528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               111, 151
               

               Conread position:
               223-503
               

               Cow position:
               chr5:10789764-10790051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               44, 184
               

               Conread position:
               229-517
               

               Cow position:
               chr5:13555177-13554888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               47, 120
               

               Conread position:
               232-380
               

               Cow position:
               chr5:59387218-59387369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               237-391
               

               Cow position:
               chr5:20454677-20454516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               242-497
               

               Cow position:
               chr5:9499198-9499468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               245-359
               

               Cow position:
               chr5:40234022-40233906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               248-503
               

               Cow position:
               chr5:15455754-15455495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               19, 73
               

               Conread position:
               255-512
               

               Cow position:
               chr5:57890377-57890113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               256-401
               

               Cow position:
               chr5:60960198-60960053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               256-503
               

               Cow position:
               chr5:29138868-29138623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               20, 81
               

               Conread position:
               259-401
               

               Cow position:
               chr5:32339102-32339244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               18, 78
               

               Conread position:
               262-478
               

               Cow position:
               chr5:66297109-66296889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               14, 136
               

               Conread position:
               263-442
               

               Cow position:
               chr5:11668309-11668486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               14, 74
               

               Conread position:
               269-502
               

               Cow position:
               chr5:34300790-34300543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               275-502
               

               Cow position:
               chr5:55195333-55195107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               151, 80
               

               Conread position:
               304-502
               

               Cow position:
               chr5:36407017-36406827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               155, 24
               

               Conread position:
               309-524
               

               Cow position:
               chr5:41945404-41945622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               95, 107
               

               Conread position:
               1-155
               

               Cow position:
               chr6:34508357-34508204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               31, 54
               

               Conread position:
               1-269
               

               Cow position:
               chr6:47216048-47215770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               87, 52
               

               Conread position:
               2-373
               

               Cow position:
               chr6:42840301-42839939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               212, 45
               

               Conread position:
               32-359
               

               Cow position:
               chr6:31879253-31879585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               56, 21
               

               Conread position:
               56-359
               

               Cow position:
               chr6:60485811-60485474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               74-503
               

               Cow position:
               chr6:60166237-60166681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               310
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               17, 235
               

               Conread position:
               85-357
               

               Cow position:
               chr6:28564249-28563969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               63, 108
               

               Conread position:
               87-485
               

               Cow position:
               chr6:17933182-17932772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               288
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               65, 274
               

               Conread position:
               96-480
               

               Cow position:
               chr6:4079338-4079716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               112, 20
               

               Conread position:
               121-373
               

               Cow position:
               chr6:49627381-49627129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               73, 28
               

               Conread position:
               127-359
               

               Cow position:
               chr6:68112466-68112699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               19, 70
               

               Conread position:
               133-501
               

               Cow position:
               chr6:30474337-30473953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               268
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               73, 28
               

               Conread position:
               134-389
               

               Cow position:
               chr6:47327050-47327311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               138-503
               

               Cow position:
               chr6:28977033-28977382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               252
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               199, 60
               

               Conread position:
               139-358
               

               Cow position:
               chr6:5500777-5501006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               142-356
               

               Cow position:
               chr6:10423174-10422964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               13, 73
               

               Conread position:
               142-356
               

               Cow position:
               chr6:44377277-44377056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               15, 158
               

               Conread position:
               142-359
               

               Cow position:
               chr6:2582878-2582662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               9, 14
               

               Conread position:
               142-359
               

               Cow position:
               chr6:24962149-24961932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               124, 62
               

               Conread position:
               142-366
               

               Cow position:
               chr6:1907550-1907319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               6, 76
               

               Conread position:
               142-371
               

               Cow position:
               chr6:12387318-12387547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               47, 54
               

               Conread position:
               142-373
               

               Cow position:
               chr6:29077736-29077502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               13, 49
               

               Conread position:
               143-385
               

               Cow position:
               chr6:38218675-38218433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               39, 79
               

               Conread position:
               143-401
               

               Cow position:
               chr6:1889084-1889336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               83, 38
               

               Conread position:
               155-359
               

               Cow position:
               chr6:60153031-60152823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               155-367
               

               Cow position:
               chr6:19427448-19427228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               155-377
               

               Cow position:
               chr6:44511238-44511008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               51, 26
               

               Conread position:
               155-409
               

               Cow position:
               chr6:6994960-6995207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               65, 39
               

               Conread position:
               155-433
               

               Cow position:
               chr6:11789996-11789712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               40, 85
               

               Conread position:
               155-502
               

               Cow position:
               chr6:1890850-1891195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               53, 186
               

               Conread position:
               155-502
               

               Cow position:
               chr6:3118201-3118567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 96
               

               Conread position:
               155-503
               

               Cow position:
               chr6:22969075-22968721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               251
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               39, 23
               

               Conread position:
               156-367
               

               Cow position:
               chr6:45617443-45617661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               156-367
               

               Cow position:
               chr6:57686147-57685938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               38, 65
               

               Conread position:
               156-368
               

               Cow position:
               chr6:27710645-27710433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               116, 29
               

               Conread position:
               156-503
               

               Cow position:
               chr6:3017441-3017104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               238
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               71, 51
               

               Conread position:
               157-378
               

               Cow position:
               chr6:58594116-58594340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               37, 51
               

               Conread position:
               160-357
               

               Cow position:
               chr6:50271108-50271305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               34, 18
               

               Conread position:
               162-378
               

               Cow position:
               chr6:54490757-54490972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               43, 9
               

               Conread position:
               162-399
               

               Cow position:
               chr6:20172203-20171968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               9, 23
               

               Conread position:
               162-503
               

               Cow position:
               chr6:45065038-45065367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               249
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               152, 9
               

               Conread position:
               162-509
               

               Cow position:
               chr6:51191806-51191448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 20
               

               Conread position:
               167-374
               

               Cow position:
               chr6:44371964-44372171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               167-377
               

               Cow position:
               chr6:60930916-60931131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               60, 40
               

               Conread position:
               167-471
               

               Cow position:
               chr6:21869669-21869982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               45, 14
               

               Conread position:
               168-377
               

               Cow position:
               chr6:6596562-6596351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               26, 172
               

               Conread position:
               169-502
               

               Cow position:
               chr6:55659733-55660068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               238
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               49, 27
               

               Conread position:
               186-358
               

               Cow position:
               chr6:24515230-24515405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               186-504
               

               Cow position:
               chr6:29084259-29084579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               11, 77
               

               Conread position:
               188-339
               

               Cow position:
               chr6:57680472-57680629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               79, 38
               

               Conread position:
               188-358
               

               Cow position:
               chr6:55936022-55936188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               88, 29
               

               Conread position:
               188-359
               

               Cow position:
               chr6:55366355-55366536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               188-378
               

               Cow position:
               chr6:52401815-52401629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               191-464
               

               Cow position:
               chr6:40137106-40137380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               205
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               79, 37
               

               Conread position:
               192-359
               

               Cow position:
               chr6:62485971-62486142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               17, 26
               

               Conread position:
               193-373
               

               Cow position:
               chr6:34235479-34235660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               24, 38
               

               Conread position:
               195-381
               

               Cow position:
               chr6:56902820-56902629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               27, 13
               

               Conread position:
               201-503
               

               Cow position:
               chr6:14289391-14289703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 65
               

               Conread position:
               202-501
               

               Cow position:
               chr6:11465940-11466249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               23, 193
               

               Conread position:
               203-367
               

               Cow position:
               chr6:9008670-9008832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               74, 17
               

               Conread position:
               203-373
               

               Cow position:
               chr6:130220-130391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               64, 16
               

               Conread position:
               203-373
               

               Cow position:
               chr6:68049378-68049209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               74, 18
               

               Conread position:
               203-503
               

               Cow position:
               chr6:49685525-49685224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 18
               

               Conread position:
               204-410
               

               Cow position:
               chr6:36202768-36202562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               73, 15
               

               Conread position:
               204-502
               

               Cow position:
               chr6:66433886-66433582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               73, 47
               

               Conread position:
               205-448
               

               Cow position:
               chr6:22986046-22986297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               13, 29
               

               Conread position:
               208-500
               

               Cow position:
               chr6:35613474-35613759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               15, 121
               

               Conread position:
               214-402
               

               Cow position:
               chr6:12519445-12519264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               8, 26
               

               Conread position:
               216-379
               

               Cow position:
               chr6:28477109-28476949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               217-362
               

               Cow position:
               chr6:33311405-33311256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 124
               

               Conread position:
               217-502
               

               Cow position:
               chr6:7253492-7253772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               50, 171
               

               Conread position:
               217-503
               

               Cow position:
               chr6:13717774-13717483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               221
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               142, 52
               

               Conread position:
               218-359
               

               Cow position:
               chr6:52002297-52002156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               218-369
               

               Cow position:
               chr6:9026446-9026294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               218-371
               

               Cow position:
               chr6:54357445-54357596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               58, 118
               

               Conread position:
               221-374
               

               Cow position:
               chr6:33360258-33360100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               221-462
               

               Cow position:
               chr6:24941281-24941045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 7
               

               Conread position:
               221-482
               

               Cow position:
               chr6:20420300-20420025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               22, 12
               

               Conread position:
               221-503
               

               Cow position:
               chr6:67304731-67304446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               54, 120
               

               Conread position:
               222-358
               

               Cow position:
               chr6:52556549-52556686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               54, 108
               

               Conread position:
               222-379
               

               Cow position:
               chr6:10106066-10106229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               222-385
               

               Cow position:
               chr6:53460647-53460810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               55, 123
               

               Conread position:
               222-393
               

               Cow position:
               chr6:44194617-44194792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               222-503
               

               Cow position:
               chr6:9323087-9322805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               44, 71
               

               Conread position:
               223-386
               

               Cow position:
               chr6:18977551-18977384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               228-359
               

               Cow position:
               chr6:38987756-38987888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               228-359
               

               Cow position:
               chr6:48655151-48655280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               47, 87
               

               Conread position:
               237-503
               

               Cow position:
               chr6:24557546-24557283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               39, 107
               

               Conread position:
               237-503
               

               Cow position:
               chr6:56860220-56859932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               254-385
               

               Cow position:
               chr6:17456761-17456625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               255-365
               

               Cow position:
               chr6:55743273-55743162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               255-503
               

               Cow position:
               chr6:20379573-20379825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               21, 129
               

               Conread position:
               261-502
               

               Cow position:
               chr6:65846561-65846823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               267-523
               

               Cow position:
               chr6:41413155-41413414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               9, 70
               

               Conread position:
               270-472
               

               Cow position:
               chr6:17736504-17736292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               168
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               289-502
               

               Cow position:
               chr6:66874219-66873994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               289-503
               

               Cow position:
               chr6:30159728-30159508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               317-502
               

               Cow position:
               chr6:24583384-24583569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               5, 82
               

               Conread position:
               1-321
               

               Cow position:
               chr7:32997919-32997562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               1-359
               

               Cow position:
               chr7:43235937-43236317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               28, 13
               

               Conread position:
               1-503
               

               Cow position:
               chr7:58499547-58500025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               517
               

               Alignm identity:
               355
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               28, 48
               

               Conread position:
               2-369
               

               Cow position:
               chr7:19190723-19191119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               49, 26
               

               Conread position:
               3-341
               

               Cow position:
               chr7:58222299-58222636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               247
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               13, 51
               

               Conread position:
               3-365
               

               Cow position:
               chr7:52061665-52061303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               80, 43
               

               Conread position:
               13-221
               

               Cow position:
               chr7:4389772-4389555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               78, 12
               

               Conread position:
               25-359
               

               Cow position:
               chr7:61771248-61771584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               244
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               66, 28
               

               Conread position:
               34-358
               

               Cow position:
               chr7:53409788-53409442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               232
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               57, 27
               

               Conread position:
               34-501
               

               Cow position:
               chr7:32478716-32478256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               323
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               60, 19
               

               Conread position:
               40-358
               

               Cow position:
               chr7:45909036-45908697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               68-367
               

               Cow position:
               chr7:98036-98335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               20, 84
               

               Conread position:
               107-467
               

               Cow position:
               chr7:19896773-19897133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               244
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               38, 94
               

               Conread position:
               109-516
               

               Cow position:
               chr7:52130548-52130152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               286
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               39, 8
               

               Conread position:
               112-383
               

               Cow position:
               chr7:51708340-51708623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               115-415
               

               Cow position:
               chr7:20443-20131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               124-368
               

               Cow position:
               chr7:34716275-34716026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               18, 31
               

               Conread position:
               129-502
               

               Cow position:
               chr7:34554279-34553917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               34, 43
               

               Conread position:
               131-359
               

               Cow position:
               chr7:48289389-48289156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 150
               

               Conread position:
               131-387
               

               Cow position:
               chr7:21197359-21197618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               25, 79
               

               Conread position:
               133-472
               

               Cow position:
               chr7:56838477-56838825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               249
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               24, 90
               

               Conread position:
               133-503
               

               Cow position:
               chr7:26665536-26665928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               70, 211
               

               Conread position:
               136-480
               

               Cow position:
               chr7:10445327-10445663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               36, 16
               

               Conread position:
               138-502
               

               Cow position:
               chr7:14079155-14079539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               129, 69
               

               Conread position:
               142-357
               

               Cow position:
               chr7:68753678-68753896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               52, 93
               

               Conread position:
               142-359
               

               Cow position:
               chr7:5914212-5913992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               81, 34
               

               Conread position:
               142-367
               

               Cow position:
               chr7:10942840-10943074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               142-472
               

               Cow position:
               chr7:40263645-40263971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               29, 40
               

               Conread position:
               143-359
               

               Cow position:
               chr7:34199338-34199114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               13, 102
               

               Conread position:
               143-359
               

               Cow position:
               chr7:59148790-59148578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               13, 6
               

               Conread position:
               144-359
               

               Cow position:
               chr7:59713478-59713254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               50, 209
               

               Conread position:
               145-371
               

               Cow position:
               chr7:21650109-21649878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               149-405
               

               Cow position:
               chr7:54633425-54633686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               9, 65
               

               Conread position:
               155-358
               

               Cow position:
               chr7:27387982-27388192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               34, 81
               

               Conread position:
               155-359
               

               Cow position:
               chr7:43215504-43215301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               122, 52
               

               Conread position:
               155-367
               

               Cow position:
               chr7:19399683-19399895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               39, 43
               

               Conread position:
               155-371
               

               Cow position:
               chr7:5209422-5209206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               48, 76
               

               Conread position:
               155-373
               

               Cow position:
               chr7:13985324-13985539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               61, 22
               

               Conread position:
               155-386
               

               Cow position:
               chr7:40727190-40726954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               50, 136
               

               Conread position:
               155-530
               

               Cow position:
               chr7:19616705-19617098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               39, 125
               

               Conread position:
               156-351
               

               Cow position:
               chr7:61425553-61425361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               178, 39
               

               Conread position:
               156-357
               

               Cow position:
               chr7:35754454-35754255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               60, 11
               

               Conread position:
               156-503
               

               Cow position:
               chr7:34670107-34669784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               252
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               38, 59
               

               Conread position:
               161-371
               

               Cow position:
               chr7:3134457-3134670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               45, 10
               

               Conread position:
               162-370
               

               Cow position:
               chr7:58841637-58841430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               9, 20
               

               Conread position:
               162-379
               

               Cow position:
               chr7:34162765-34162561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               163-371
               

               Cow position:
               chr7:40067639-40067435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               114, 8
               

               Conread position:
               167-359
               

               Cow position:
               chr7:36746307-36746108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               167-395
               

               Cow position:
               chr7:40405832-40405605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               50, 30
               

               Conread position:
               167-500
               

               Cow position:
               chr7:45955911-45955578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               27, 50
               

               Conread position:
               167-528
               

               Cow position:
               chr7:54700061-54699687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 37
               

               Conread position:
               168-359
               

               Cow position:
               chr7:60458950-60459144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               16, 51
               

               Conread position:
               168-502
               

               Cow position:
               chr7:15608394-15608063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               26, 49
               

               Conread position:
               169-358
               

               Cow position:
               chr7:59245946-59245753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               97, 43
               

               Conread position:
               178-359
               

               Cow position:
               chr7:26195821-26195997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               98, 30
               

               Conread position:
               181-387
               

               Cow position:
               chr7:25223568-25223363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               94, 32
               

               Conread position:
               182-367
               

               Cow position:
               chr7:14252507-14252321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               21, 8
               

               Conread position:
               183-502
               

               Cow position:
               chr7:38070041-38070364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               233
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               82, 21
               

               Conread position:
               184-358
               

               Cow position:
               chr7:10345461-10345643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               184-358
               

               Cow position:
               chr7:66894577-66894750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               93, 19
               

               Conread position:
               185-502
               

               Cow position:
               chr7:41445326-41444993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               18, 97
               

               Conread position:
               188-359
               

               Cow position:
               chr7:28561088-28561263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               188-359
               

               Cow position:
               chr7:57162109-57161938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               90, 11
               

               Conread position:
               188-385
               

               Cow position:
               chr7:25703261-25703455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               17, 45
               

               Conread position:
               188-510
               

               Cow position:
               chr7:40621903-40621573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 156
               

               Conread position:
               189-370
               

               Cow position:
               chr7:68588359-68588175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               78, 31
               

               Conread position:
               190-377
               

               Cow position:
               chr7:62610271-62610077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               197-372
               

               Cow position:
               chr7:52895278-52895102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               65, 19
               

               Conread position:
               200-502
               

               Cow position:
               chr7:61621219-61621532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               41, 33
               

               Conread position:
               201-502
               

               Cow position:
               chr7:29622782-29622483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               74, 16
               

               Conread position:
               203-371
               

               Cow position:
               chr7:56820628-56820794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               73, 16
               

               Conread position:
               203-373
               

               Cow position:
               chr7:268938-268771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 51
               

               Conread position:
               203-502
               

               Cow position:
               chr7:16022241-16021936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               206, 17
               

               Conread position:
               203-503
               

               Cow position:
               chr7:25867563-25867874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               74, 16
               

               Conread position:
               204-359
               

               Cow position:
               chr7:57610702-57610545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               204-372
               

               Cow position:
               chr7:20105069-20105243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               208-359
               

               Cow position:
               chr7:15755507-15755660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               208-371
               

               Cow position:
               chr7:17782736-17782895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 45
               

               Conread position:
               208-456
               

               Cow position:
               chr7:46928931-46928673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               208-476
               

               Cow position:
               chr7:53786016-53786279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               15, 107
               

               Conread position:
               208-502
               

               Cow position:
               chr7:64003410-64003112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               217
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               68, 105
               

               Conread position:
               209-359
               

               Cow position:
               chr7:67498644-67498494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               67, 5
               

               Conread position:
               209-502
               

               Cow position:
               chr7:53358781-53359073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               58, 133
               

               Conread position:
               210-367
               

               Cow position:
               chr7:40758302-40758465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               210-369
               

               Cow position:
               chr7:52751949-52752113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               16, 7
               

               Conread position:
               212-458
               

               Cow position:
               chr7:5665247-5665003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               13, 145
               

               Conread position:
               214-359
               

               Cow position:
               chr7:32880345-32880490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               62, 123
               

               Conread position:
               214-379
               

               Cow position:
               chr7:54559605-54559770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               62, 49
               

               Conread position:
               216-503
               

               Cow position:
               chr7:34569137-34568834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               220
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               219-502
               

               Cow position:
               chr7:48012241-48011959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 7
               

               Conread position:
               220-379
               

               Cow position:
               chr7:53743970-53744133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               47, 121
               

               Conread position:
               220-388
               

               Cow position:
               chr7:41597738-41597910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               7, 120
               

               Conread position:
               220-401
               

               Cow position:
               chr7:20081133-20081316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               221-358
               

               Cow position:
               chr7:57583763-57583624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               221-367
               

               Cow position:
               chr7:31446283-31446430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               32, 7
               

               Conread position:
               221-369
               

               Cow position:
               chr7:52295060-52294914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               56, 94
               

               Conread position:
               221-373
               

               Cow position:
               chr7:40894453-40894296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               221-389
               

               Cow position:
               chr7:49395629-49395798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               221-391
               

               Cow position:
               chr7:14458986-14459158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               17, 118
               

               Conread position:
               221-429
               

               Cow position:
               chr7:37317759-37317968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               55, 113
               

               Conread position:
               221-526
               

               Cow position:
               chr7:43873154-43872846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               46, 161
               

               Conread position:
               222-389
               

               Cow position:
               chr7:17967190-17967358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               62, 166
               

               Conread position:
               222-501
               

               Cow position:
               chr7:1350384-1350659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               54, 92
               

               Conread position:
               222-502
               

               Cow position:
               chr7:48695729-48695443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               50, 179
               

               Conread position:
               222-506
               

               Cow position:
               chr7:34871953-34872239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               45, 143
               

               Conread position:
               223-373
               

               Cow position:
               chr7:12659065-12659223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               223-502
               

               Cow position:
               chr7:20827694-20827969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               205, 37
               

               Conread position:
               235-512
               

               Cow position:
               chr7:32260365-32260656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               103, 35
               

               Conread position:
               236-502
               

               Cow position:
               chr7:50095297-50095022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 69
               

               Conread position:
               236-503
               

               Cow position:
               chr7:20355871-20355615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               42, 154
               

               Conread position:
               237-526
               

               Cow position:
               chr7:51472897-51473181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               39, 167
               

               Conread position:
               240-424
               

               Cow position:
               chr7:41727847-41727666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               36, 76
               

               Conread position:
               247-375
               

               Cow position:
               chr7:38144756-38144885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               250-502
               

               Cow position:
               chr7:37455222-37454958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               253-502
               

               Cow position:
               chr7:58867506-58867246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               253-503
               

               Cow position:
               chr7:36996274-36996026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               24, 109
               

               Conread position:
               257-497
               

               Cow position:
               chr7:52130876-52131130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               20, 242
               

               Conread position:
               273-480
               

               Cow position:
               chr7:41498747-41498542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               132, 61
               

               Conread position:
               276-503
               

               Cow position:
               chr7:29302484-29302718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               278-401
               

               Cow position:
               chr7:12424167-12424044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               337-502
               

               Cow position:
               chr7:23761805-23761636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               89, 64
               

               Conread position:
               1-359
               

               Cow position:
               chr8:36871225-36871596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               254
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               28, 55
               

               Conread position:
               3-384
               

               Cow position:
               chr8:20282134-20281757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               30, 65
               

               Conread position:
               4-502
               

               Cow position:
               chr8:20649278-20648787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               513
               

               Alignm identity:
               328
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               23, 51
               

               Conread position:
               38-316
               

               Cow position:
               chr8:21717259-21716983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               9, 16
               

               Conread position:
               62-351
               

               Cow position:
               chr8:35570312-35570609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               29, 75
               

               Conread position:
               97-503
               

               Cow position:
               chr8:20107767-20108167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               16, 37
               

               Conread position:
               109-353
               

               Cow position:
               chr8:45686426-45686664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               157, 8
               

               Conread position:
               113-407
               

               Cow position:
               chr8:32719978-32719690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               44, 10
               

               Conread position:
               124-367
               

               Cow position:
               chr8:24934149-24933902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               82, 166
               

               Conread position:
               129-394
               

               Cow position:
               chr8:39985749-39986012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               16, 74
               

               Conread position:
               130-503
               

               Cow position:
               chr8:43904775-43904399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               266
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               15, 74
               

               Conread position:
               131-359
               

               Cow position:
               chr8:51905054-51905287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               18, 25
               

               Conread position:
               136-407
               

               Cow position:
               chr8:24909588-24909325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 14
               

               Conread position:
               142-373
               

               Cow position:
               chr8:9624737-9624509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               16, 10
               

               Conread position:
               142-497
               

               Cow position:
               chr8:42578100-42578455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               256
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               61, 53
               

               Conread position:
               142-502
               

               Cow position:
               chr8:24867766-24868134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               254
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               81, 52
               

               Conread position:
               143-401
               

               Cow position:
               chr8:6073841-6074081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               69, 79
               

               Conread position:
               144-397
               

               Cow position:
               chr8:10263190-10263443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               50, 69
               

               Conread position:
               150-387
               

               Cow position:
               chr8:10434777-10434538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               44, 8
               

               Conread position:
               155-356
               

               Cow position:
               chr8:24834679-24834488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               121, 39
               

               Conread position:
               155-359
               

               Cow position:
               chr8:29028115-29028324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               51, 168
               

               Conread position:
               155-359
               

               Cow position:
               chr8:35436649-35436856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               51, 185
               

               Conread position:
               155-502
               

               Cow position:
               chr8:8010864-8010514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               121, 55
               

               Conread position:
               155-503
               

               Cow position:
               chr8:60320484-60320132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 52
               

               Conread position:
               156-353
               

               Cow position:
               chr8:21078499-21078300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               38, 21
               

               Conread position:
               156-359
               

               Cow position:
               chr8:8480992-8481188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               102, 38
               

               Conread position:
               156-359
               

               Cow position:
               chr8:22103218-22103424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               48, 34
               

               Conread position:
               156-415
               

               Cow position:
               chr8:44664613-44664885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               201
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               156-504
               

               Cow position:
               chr8:27369058-27368732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               120, 61
               

               Conread position:
               158-359
               

               Cow position:
               chr8:8134540-8134750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               162-503
               

               Cow position:
               chr8:225417-225766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               248
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               75, 9
               

               Conread position:
               163-373
               

               Cow position:
               chr8:38572323-38572536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               41, 8
               

               Conread position:
               167-374
               

               Cow position:
               chr8:4563471-4563685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               27, 35
               

               Conread position:
               167-502
               

               Cow position:
               chr8:37122927-37122603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               27, 122
               

               Conread position:
               167-503
               

               Cow position:
               chr8:53642466-53642796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               27, 31
               

               Conread position:
               176-389
               

               Cow position:
               chr8:606490-606702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               46, 96
               

               Conread position:
               181-501
               

               Cow position:
               chr8:55323619-55323289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               29, 328
               

               Conread position:
               184-377
               

               Cow position:
               chr8:4940377-4940569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               93, 42
               

               Conread position:
               185-502
               

               Cow position:
               chr8:20673842-20674152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               9, 37
               

               Conread position:
               186-359
               

               Cow position:
               chr8:25349642-25349466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 34
               

               Conread position:
               186-501
               

               Cow position:
               chr8:16093204-16092887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 17
               

               Conread position:
               187-368
               

               Cow position:
               chr8:42889203-42889384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               32, 133
               

               Conread position:
               190-359
               

               Cow position:
               chr8:4161101-4161269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               86, 30
               

               Conread position:
               194-375
               

               Cow position:
               chr8:60688295-60688471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               84, 26
               

               Conread position:
               196-359
               

               Cow position:
               chr8:21947906-21948072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               10, 26
               

               Conread position:
               202-348
               

               Cow position:
               chr8:42315120-42315262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               74, 12
               

               Conread position:
               202-385
               

               Cow position:
               chr8:34663767-34663581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               65, 18
               

               Conread position:
               203-373
               

               Cow position:
               chr8:21961161-21960994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               74, 16
               

               Conread position:
               208-357
               

               Cow position:
               chr8:59061583-59061431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               208-359
               

               Cow position:
               chr8:6232987-6233140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               208-359
               

               Cow position:
               chr8:40030549-40030704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               60, 18
               

               Conread position:
               208-369
               

               Cow position:
               chr8:11606245-11606082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               208-374
               

               Cow position:
               chr8:10337113-10337285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               208-426
               

               Cow position:
               chr8:47136098-47136323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               69, 125
               

               Conread position:
               208-480
               

               Cow position:
               chr8:26877362-26877078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               39, 106
               

               Conread position:
               210-503
               

               Cow position:
               chr8:1107280-1107568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               57, 129
               

               Conread position:
               217-371
               

               Cow position:
               chr8:8902063-8902224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               217-377
               

               Cow position:
               chr8:51361465-51361299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 19
               

               Conread position:
               218-415
               

               Cow position:
               chr8:32491455-32491260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               58, 115
               

               Conread position:
               219-369
               

               Cow position:
               chr8:58642782-58642933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               57, 44
               

               Conread position:
               220-369
               

               Cow position:
               chr8:57650252-57650397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               56, 69
               

               Conread position:
               221-384
               

               Cow position:
               chr8:12660852-12661014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               55, 116
               

               Conread position:
               222-369
               

               Cow position:
               chr8:33814839-33814690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               222-503
               

               Cow position:
               chr8:26922534-26922255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               56, 155
               

               Conread position:
               223-385
               

               Cow position:
               chr8:31637730-31637567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               30, 104
               

               Conread position:
               223-496
               

               Cow position:
               chr8:31289070-31289338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               53, 91
               

               Conread position:
               228-371
               

               Cow position:
               chr8:1841003-1841143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               48, 82
               

               Conread position:
               228-502
               

               Cow position:
               chr8:51303580-51303299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               13, 114
               

               Conread position:
               232-502
               

               Cow position:
               chr8:47678414-47678141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               18, 165
               

               Conread position:
               234-502
               

               Cow position:
               chr8:42794430-42794713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               43, 34
               

               Conread position:
               236-395
               

               Cow position:
               chr8:24517549-24517706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               41, 99
               

               Conread position:
               241-502
               

               Cow position:
               chr8:31262578-31262322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 95
               

               Conread position:
               242-503
               

               Cow position:
               chr8:48955792-48955547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               34, 117
               

               Conread position:
               245-365
               

               Cow position:
               chr8:51588704-51588824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               32, 89
               

               Conread position:
               252-401
               

               Cow position:
               chr8:300151-300301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               255-481
               

               Cow position:
               chr8:54231161-54230931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               22, 37
               

               Conread position:
               257-500
               

               Cow position:
               chr8:58346669-58346425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               19, 57
               

               Conread position:
               260-502
               

               Cow position:
               chr8:18081394-18081157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               17, 102
               

               Conread position:
               261-375
               

               Cow position:
               chr8:10400164-10400049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               275-502
               

               Cow position:
               chr8:13559582-13559351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 127
               

               Conread position:
               335-493
               

               Cow position:
               chr8:28205478-28205311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-399
               

               Cow position:
               chr9:9324839-9325264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 54
               

               Conread position:
               11-313
               

               Cow position:
               chr9:64024116-64024430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               80, 18
               

               Conread position:
               32-358
               

               Cow position:
               chr9:12322116-12321779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               52, 21
               

               Conread position:
               84-359
               

               Cow position:
               chr9:52409468-52409173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               78, 275
               

               Conread position:
               85-350
               

               Cow position:
               chr9:47547748-47547481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               25, 21
               

               Conread position:
               85-357
               

               Cow position:
               chr9:33847083-33846795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               59, 270
               

               Conread position:
               85-422
               

               Cow position:
               chr9:34762843-34762509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               47, 32
               

               Conread position:
               96-415
               

               Cow position:
               chr9:52578523-52578195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               46, 21
               

               Conread position:
               97-406
               

               Cow position:
               chr9:51311685-51311997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               13, 37
               

               Conread position:
               109-353
               

               Cow position:
               chr9:4285236-4284998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               48, 23
               

               Conread position:
               113-503
               

               Cow position:
               chr9:41781928-41782340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 10
               

               Conread position:
               124-504
               

               Cow position:
               chr9:8779192-8778800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 17
               

               Conread position:
               130-359
               

               Cow position:
               chr9:11146605-11146373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               26, 11
               

               Conread position:
               130-380
               

               Cow position:
               chr9:3722824-3722565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               26, 207
               

               Conread position:
               131-359
               

               Cow position:
               chr9:5141128-5141356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               26, 161
               

               Conread position:
               131-367
               

               Cow position:
               chr9:34310076-34310324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               131-381
               

               Cow position:
               chr9:21674941-21674681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               20, 25
               

               Conread position:
               132-371
               

               Cow position:
               chr9:60459239-60459468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               133-358
               

               Cow position:
               chr9:20839665-20839897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               26, 120
               

               Conread position:
               133-373
               

               Cow position:
               chr9:19382381-19382618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               18, 23
               

               Conread position:
               141-372
               

               Cow position:
               chr9:64091745-64091984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               144-502
               

               Cow position:
               chr9:44408105-44408461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               11, 5
               

               Conread position:
               155-359
               

               Cow position:
               chr9:3724988-3724780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               39, 186
               

               Conread position:
               155-502
               

               Cow position:
               chr9:34093360-34093008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               240
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               39, 195
               

               Conread position:
               155-507
               

               Cow position:
               chr9:14961025-14961382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               252
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               54, 40
               

               Conread position:
               156-349
               

               Cow position:
               chr9:9200647-9200453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               47, 11
               

               Conread position:
               156-359
               

               Cow position:
               chr9:5621959-5621748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               156-373
               

               Cow position:
               chr9:32396019-32396239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               38, 196
               

               Conread position:
               156-511
               

               Cow position:
               chr9:8950982-8951327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               38, 46
               

               Conread position:
               157-354
               

               Cow position:
               chr9:26828741-26828544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               112, 8
               

               Conread position:
               157-359
               

               Cow position:
               chr9:12355934-12356138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               46, 38
               

               Conread position:
               159-406
               

               Cow position:
               chr9:9416322-9416079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               45, 68
               

               Conread position:
               160-503
               

               Cow position:
               chr9:16745755-16746120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               257
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               34, 155
               

               Conread position:
               162-367
               

               Cow position:
               chr9:55084207-55084007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               46, 9
               

               Conread position:
               162-370
               

               Cow position:
               chr9:3070330-3070130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               115, 9
               

               Conread position:
               162-431
               

               Cow position:
               chr9:47875866-47875593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               9, 20
               

               Conread position:
               162-518
               

               Cow position:
               chr9:41317881-41317533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               247
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               9, 53
               

               Conread position:
               164-454
               

               Cow position:
               chr9:24850326-24850623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               66, 31
               

               Conread position:
               167-384
               

               Cow position:
               chr9:38692448-38692231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               95, 18
               

               Conread position:
               167-456
               

               Cow position:
               chr9:36999973-36999678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               27, 5
               

               Conread position:
               167-502
               

               Cow position:
               chr9:10761263-10760917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               242
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               27, 31
               

               Conread position:
               168-374
               

               Cow position:
               chr9:35368965-35369177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               26, 83
               

               Conread position:
               170-359
               

               Cow position:
               chr9:8099730-8099540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               170-506
               

               Cow position:
               chr9:41958710-41958378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               232
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               24, 228
               

               Conread position:
               182-359
               

               Cow position:
               chr9:54924729-54924908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               86, 32
               

               Conread position:
               182-372
               

               Cow position:
               chr9:5340736-5340927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               27, 154
               

               Conread position:
               188-379
               

               Cow position:
               chr9:35100975-35101169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               188-503
               

               Cow position:
               chr9:58673848-58674159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               60, 11
               

               Conread position:
               190-359
               

               Cow position:
               chr9:5029628-5029797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               86, 36
               

               Conread position:
               193-359
               

               Cow position:
               chr9:35850013-35850180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               24, 145
               

               Conread position:
               194-366
               

               Cow position:
               chr9:3216322-3216494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               73, 26
               

               Conread position:
               194-455
               

               Cow position:
               chr9:3582830-3582565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               30, 143
               

               Conread position:
               201-352
               

               Cow position:
               chr9:28706079-28705928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               26, 55
               

               Conread position:
               203-395
               

               Cow position:
               chr9:49403881-49404072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               119, 16
               

               Conread position:
               203-438
               

               Cow position:
               chr9:33940732-33940970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               74, 226
               

               Conread position:
               203-502
               

               Cow position:
               chr9:37069442-37069148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               74, 17
               

               Conread position:
               204-502
               

               Cow position:
               chr9:44552873-44553173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               72, 150
               

               Conread position:
               205-357
               

               Cow position:
               chr9:18002822-18002669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               208-367
               

               Cow position:
               chr9:24886491-24886333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               18, 60
               

               Conread position:
               208-373
               

               Cow position:
               chr9:11155637-11155801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               68, 5
               

               Conread position:
               208-391
               

               Cow position:
               chr9:49764785-49764970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               214-396
               

               Cow position:
               chr9:11743753-11743940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               217-369
               

               Cow position:
               chr9:9556448-9556600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               18, 33
               

               Conread position:
               217-502
               

               Cow position:
               chr9:5518511-5518213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               52, 233
               

               Conread position:
               217-503
               

               Cow position:
               chr9:30020113-30020401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               17, 125
               

               Conread position:
               217-503
               

               Cow position:
               chr9:34400173-34400474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               20, 15
               

               Conread position:
               219-379
               

               Cow position:
               chr9:10118524-10118360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               220-501
               

               Cow position:
               chr9:26099479-26099745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               56, 156
               

               Conread position:
               221-359
               

               Cow position:
               chr9:52787394-52787254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               221-359
               

               Cow position:
               chr9:55262436-55262301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               55, 114
               

               Conread position:
               221-373
               

               Cow position:
               chr9:27449477-27449629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               55, 49
               

               Conread position:
               221-379
               

               Cow position:
               chr9:24904619-24904779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               221-401
               

               Cow position:
               chr9:15054020-15054202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               221-502
               

               Cow position:
               chr9:8600476-8600758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               25, 144
               

               Conread position:
               221-503
               

               Cow position:
               chr9:5399862-5400167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               55, 116
               

               Conread position:
               221-503
               

               Cow position:
               chr9:40060188-40059900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 146
               

               Conread position:
               222-371
               

               Cow position:
               chr9:36586675-36586525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               230-359
               

               Cow position:
               chr9:33100989-33100860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               38, 109
               

               Conread position:
               234-372
               

               Cow position:
               chr9:2205902-2205764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               42, 103
               

               Conread position:
               235-472
               

               Cow position:
               chr9:9368800-9368570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               33, 105
               

               Conread position:
               239-381
               

               Cow position:
               chr9:51744305-51744161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               29, 102
               

               Conread position:
               249-503
               

               Cow position:
               chr9:20579447-20579191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               111, 29
               

               Conread position:
               250-502
               

               Cow position:
               chr9:19067971-19068227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               259-418
               

               Cow position:
               chr9:27292063-27291907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               17, 70
               

               Conread position:
               275-385
               

               Cow position:
               chr9:47836846-47836736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               277-503
               

               Cow position:
               chr9:3844875-3844662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               197, 32
               

               Conread position:
               337-503
               

               Cow position:
               chr9:32688537-32688366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1-353
               

               Cow position:
               chrX:3395631-3395981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               256
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               28, 63
               

               Conread position:
               1-357
               

               Cow position:
               chrX:27069755-27070107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               254
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               88, 52
               

               Conread position:
               2-153
               

               Cow position:
               chrX:37299766-37299617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               87, 26
               

               Conread position:
               2-359
               

               Cow position:
               chrX:30763273-30763646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               27, 53
               

               Conread position:
               2-381
               

               Cow position:
               chrX:26880744-26880362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 60
               

               Conread position:
               7-291
               

               Cow position:
               chrX:19438023-19437742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               26, 48
               

               Conread position:
               8-384
               

               Cow position:
               chrX:40540005-40540393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               275
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               83, 17
               

               Conread position:
               9-367
               

               Cow position:
               chrX:14909157-14908782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               266
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               79, 16
               

               Conread position:
               17-502
               

               Cow position:
               chrX:19023566-19023080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               331
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               10, 39
               

               Conread position:
               32-359
               

               Cow position:
               chrX:6694310-6694656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               241
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               80, 21
               

               Conread position:
               33-341
               

               Cow position:
               chrX:38667499-38667830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               7, 21
               

               Conread position:
               33-393
               

               Cow position:
               chrX:17933360-17933722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               144, 27
               

               Conread position:
               35-315
               

               Cow position:
               chrX:12094299-12094593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               117, 18
               

               Conread position:
               89-503
               

               Cow position:
               chrX:16732678-16733093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               291
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               60, 99
               

               Conread position:
               91-502
               

               Cow position:
               chrX:40279877-40279461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               287
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               7, 52
               

               Conread position:
               97-359
               

               Cow position:
               chrX:25232633-25232364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               16, 170
               

               Conread position:
               97-383
               

               Cow position:
               chrX:26875841-26876131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               13, 234
               

               Conread position:
               97-502
               

               Cow position:
               chrX:17630763-17631177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 50
               

               Conread position:
               103-375
               

               Cow position:
               chrX:10373351-10373065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               40, 20
               

               Conread position:
               107-359
               

               Cow position:
               chrX:18293949-18293706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               169, 13
               

               Conread position:
               109-359
               

               Cow position:
               chrX:488520-488264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               15, 35
               

               Conread position:
               112-357
               

               Cow position:
               chrX:630287-630532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               91, 30
               

               Conread position:
               113-504
               

               Cow position:
               chrX:11675087-11674711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               275
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               115-500
               

               Cow position:
               chrX:24259562-24259954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               105, 222
               

               Conread position:
               123-501
               

               Cow position:
               chrX:905359-904965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               273
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               76, 23
               

               Conread position:
               127-344
               

               Cow position:
               chrX:18248312-18248100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               127-358
               

               Cow position:
               chrX:20791811-20792043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               67, 19
               

               Conread position:
               127-502
               

               Cow position:
               chrX:29032417-29032039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 10
               

               Conread position:
               129-373
               

               Cow position:
               chrX:20653400-20653155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               17, 32
               

               Conread position:
               129-503
               

               Cow position:
               chrX:2764882-2764489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               27, 16
               

               Conread position:
               130-359
               

               Cow position:
               chrX:18456407-18456166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               132-381
               

               Cow position:
               chrX:619006-619256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               27, 42
               

               Conread position:
               133-372
               

               Cow position:
               chrX:17271281-17271528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               20, 66
               

               Conread position:
               133-377
               

               Cow position:
               chrX:25419154-25419405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               73, 211
               

               Conread position:
               133-502
               

               Cow position:
               chrX:7425470-7425083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 18
               

               Conread position:
               133-527
               

               Cow position:
               chrX:40692750-40693132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               274
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               61, 85
               

               Conread position:
               135-367
               

               Cow position:
               chrX:25338186-25337945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               21, 14
               

               Conread position:
               141-377
               

               Cow position:
               chrX:8517864-8517632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               15, 8
               

               Conread position:
               141-407
               

               Cow position:
               chrX:21672551-21672277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               142-383
               

               Cow position:
               chrX:8558468-8558713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               15, 7
               

               Conread position:
               142-503
               

               Cow position:
               chrX:38840883-38840508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               261
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               64, 97
               

               Conread position:
               143-500
               

               Cow position:
               chrX:16283950-16284321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 6
               

               Conread position:
               144-356
               

               Cow position:
               chrX:1616052-1616271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               154-359
               

               Cow position:
               chrX:28856956-28856751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               48, 65
               

               Conread position:
               154-372
               

               Cow position:
               chrX:36693218-36692996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               154-375
               

               Cow position:
               chrX:160050-160275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               52, 185
               

               Conread position:
               155-350
               

               Cow position:
               chrX:28929818-28929625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               39, 43
               

               Conread position:
               155-357
               

               Cow position:
               chrX:17042674-17042466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               155-359
               

               Cow position:
               chrX:2648372-2648576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               39, 126
               

               Conread position:
               155-370
               

               Cow position:
               chrX:36840851-36840636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               82, 22
               

               Conread position:
               155-373
               

               Cow position:
               chrX:32743516-32743298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               51, 101
               

               Conread position:
               155-379
               

               Cow position:
               chrX:6563502-6563266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               51, 167
               

               Conread position:
               155-454
               

               Cow position:
               chrX:21004662-21004360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               39, 20
               

               Conread position:
               155-472
               

               Cow position:
               chrX:13323016-13323335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               47, 39
               

               Conread position:
               156-358
               

               Cow position:
               chrX:35925936-35925742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               156-359
               

               Cow position:
               chrX:43647767-43647970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               71, 38
               

               Conread position:
               156-401
               

               Cow position:
               chrX:21816243-21815991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               38, 183
               

               Conread position:
               160-359
               

               Cow position:
               chrX:13245571-13245365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               34, 148
               

               Conread position:
               162-373
               

               Cow position:
               chrX:32020154-32020362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               115, 9
               

               Conread position:
               162-377
               

               Cow position:
               chrX:12249767-12249561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               115, 9
               

               Conread position:
               162-406
               

               Cow position:
               chrX:2206585-2206817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               115, 9
               

               Conread position:
               162-502
               

               Cow position:
               chrX:2147312-2146971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               243
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               54, 10
               

               Conread position:
               162-503
               

               Cow position:
               chrX:39558385-39558715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               115, 9
               

               Conread position:
               164-471
               

               Cow position:
               chrX:23514052-23514354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               113, 7
               

               Conread position:
               167-353
               

               Cow position:
               chrX:281093-280914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               27, 55
               

               Conread position:
               167-359
               

               Cow position:
               chrX:17794944-17794759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               110, 14
               

               Conread position:
               167-482
               

               Cow position:
               chrX:35284589-35284255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               27, 113
               

               Conread position:
               168-373
               

               Cow position:
               chrX:33020452-33020246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               26, 170
               

               Conread position:
               172-383
               

               Cow position:
               chrX:6607389-6607171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               14, 167
               

               Conread position:
               179-503
               

               Cow position:
               chrX:42499071-42499416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               38, 24
               

               Conread position:
               180-500
               

               Cow position:
               chrX:26625716-26626030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               37, 14
               

               Conread position:
               181-373
               

               Cow position:
               chrX:20710026-20709830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               86, 31
               

               Conread position:
               182-359
               

               Cow position:
               chrX:42855363-42855182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               85, 21
               

               Conread position:
               182-373
               

               Cow position:
               chrX:6012150-6012347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               182-502
               

               Cow position:
               chrX:23414409-23414729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               12, 40
               

               Conread position:
               186-367
               

               Cow position:
               chrX:39346832-39347020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               12, 158
               

               Conread position:
               188-359
               

               Cow position:
               chrX:41743854-41743687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               89, 15
               

               Conread position:
               188-373
               

               Cow position:
               chrX:31442879-31443061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               88, 8
               

               Conread position:
               189-353
               

               Cow position:
               chrX:24827276-24827106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               31, 19
               

               Conread position:
               190-359
               

               Cow position:
               chrX:4482910-4482736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               193-502
               

               Cow position:
               chrX:2700866-2701178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               18, 227
               

               Conread position:
               193-503
               

               Cow position:
               chrX:38935226-38934907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               225
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               71, 215
               

               Conread position:
               194-503
               

               Cow position:
               chrX:15994348-15994052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 194
               

               Conread position:
               195-502
               

               Cow position:
               chrX:47243333-47243650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 212
               

               Conread position:
               195-504
               

               Cow position:
               chrX:13058523-13058215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 203
               

               Conread position:
               196-501
               

               Cow position:
               chrX:25281527-25281831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               78, 30
               

               Conread position:
               197-406
               

               Cow position:
               chrX:2029333-2029117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               23, 147
               

               Conread position:
               200-501
               

               Cow position:
               chrX:18287124-18287431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               25, 49
               

               Conread position:
               201-502
               

               Cow position:
               chrX:31571325-31571038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               212, 46
               

               Conread position:
               201-502
               

               Cow position:
               chrX:33827084-33827378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               24, 214
               

               Conread position:
               202-359
               

               Cow position:
               chrX:6659312-6659147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               6, 108
               

               Conread position:
               203-359
               

               Cow position:
               chrX:41167036-41167190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               74, 17
               

               Conread position:
               203-373
               

               Cow position:
               chrX:20582956-20582790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               54, 16
               

               Conread position:
               203-391
               

               Cow position:
               chrX:36975880-36975692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               74, 166
               

               Conread position:
               203-401
               

               Cow position:
               chrX:20168137-20167936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               55, 23
               

               Conread position:
               203-502
               

               Cow position:
               chrX:37489656-37489371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               271, 23
               

               Conread position:
               203-502
               

               Cow position:
               chrX:42492585-42492877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               74, 25
               

               Conread position:
               208-365
               

               Cow position:
               chrX:22074727-22074568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               208-381
               

               Cow position:
               chrX:27394093-27394262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               69, 43
               

               Conread position:
               208-490
               

               Cow position:
               chrX:44961676-44961378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               212
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               9, 25
               

               Conread position:
               208-503
               

               Cow position:
               chrX:7513441-7513143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               217
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               15, 122
               

               Conread position:
               208-503
               

               Cow position:
               chrX:11073262-11073553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               69, 169
               

               Conread position:
               210-389
               

               Cow position:
               chrX:6640049-6639868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               210-497
               

               Cow position:
               chrX:24524799-24524501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               66, 166
               

               Conread position:
               212-358
               

               Cow position:
               chrX:7361929-7362078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               64, 141
               

               Conread position:
               214-502
               

               Cow position:
               chrX:42530535-42530831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 54
               

               Conread position:
               216-503
               

               Cow position:
               chrX:22139150-22139431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               183, 5
               

               Conread position:
               217-359
               

               Cow position:
               chrX:3154327-3154472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               51, 123
               

               Conread position:
               217-359
               

               Cow position:
               chrX:15329567-15329427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               59, 36
               

               Conread position:
               217-502
               

               Cow position:
               chrX:23970301-23970011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 59
               

               Conread position:
               217-503
               

               Cow position:
               chrX:9538479-9538196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               58, 167
               

               Conread position:
               217-504
               

               Cow position:
               chrX:9838059-9837771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               211
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               54, 149
               

               Conread position:
               218-359
               

               Cow position:
               chrX:17743980-17743834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               221-359
               

               Cow position:
               chrX:10462548-10462411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               221-359
               

               Cow position:
               chrX:31059059-31058922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               55, 64
               

               Conread position:
               221-359
               

               Cow position:
               chrX:42500404-42500268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 115
               

               Conread position:
               221-367
               

               Cow position:
               chrX:3161101-3161250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               221-407
               

               Cow position:
               chrX:18989581-18989389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               46, 146
               

               Conread position:
               221-414
               

               Cow position:
               chrX:8519420-8519231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               58, 91
               

               Conread position:
               221-502
               

               Cow position:
               chrX:37364654-37364376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               137, 52
               

               Conread position:
               221-502
               

               Cow position:
               chrX:37906881-37906605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               214
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               46, 182
               

               Conread position:
               221-502
               

               Cow position:
               chrX:38549365-38549065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               221-503
               

               Cow position:
               chrX:9855217-9854931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               210
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               46, 203
               

               Conread position:
               221-503
               

               Cow position:
               chrX:9954058-9953772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               46, 203
               

               Conread position:
               221-503
               

               Cow position:
               chrX:44908232-44907968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               57, 48
               

               Conread position:
               221-520
               

               Cow position:
               chrX:25163732-25163434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               216
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               51, 135
               

               Conread position:
               222-353
               

               Cow position:
               chrX:23091793-23091661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               222-356
               

               Cow position:
               chrX:13177553-13177688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               222-379
               

               Cow position:
               chrX:25617996-25618158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               222-407
               

               Cow position:
               chrX:38642173-38641985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               45, 118
               

               Conread position:
               228-373
               

               Cow position:
               chrX:13912985-13912839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               48, 33
               

               Conread position:
               228-458
               

               Cow position:
               chrX:20129066-20129308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               8, 82
               

               Conread position:
               228-502
               

               Cow position:
               chrX:43075904-43075634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               49, 157
               

               Conread position:
               255-502
               

               Cow position:
               chrX:32623461-32623218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               22, 103
               

               Conread position:
               255-502
               

               Cow position:
               chrX:33538826-33538580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               22, 41
               

               Conread position:
               258-502
               

               Cow position:
               chrX:46044920-46044672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               20, 104
               

               Conread position:
               261-467
               

               Cow position:
               chrX:46984624-46984845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               261-503
               

               Cow position:
               chrX:33519490-33519231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 230
               

               Conread position:
               288-503
               

               Cow position:
               chrX:42757525-42757309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               48, 122
               

               Conread position:
               290-502
               

               Cow position:
               chrX:27287877-27288089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               184, 46