Non-Coding RNA Search

Cow genome map


           Conread name:
           Lym2-sn35_F03.f1
        

               Conread position:
               421-679
               

               Cow position:
               chr1:6166128-6165868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               9, 23
               

               Conread position:
               426-551
               

               Cow position:
               chr1:67916906-67916781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               75, 91
               

               Conread position:
               426-680
               

               Cow position:
               chr1:98023522-98023785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 170
               

               Conread position:
               428-556
               

               Cow position:
               chr1:51394291-51394159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               62, 8
               

               Conread position:
               429-542
               

               Cow position:
               chr1:81355837-81355949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               429-680
               

               Cow position:
               chr1:22615757-22616020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               196
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               16, 185
               

               Conread position:
               430-563
               

               Cow position:
               chr1:25856557-25856422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               432-531
               

               Cow position:
               chr1:55357422-55357521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-556
               

               Cow position:
               chr1:52435133-52435010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-680
               

               Cow position:
               chr1:52913005-52913256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               59, 84
               

               Conread position:
               433-680
               

               Cow position:
               chr1:57635328-57635065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 15
               

               Conread position:
               434-680
               

               Cow position:
               chr1:102825954-102826205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               122, 17
               

               Conread position:
               436-680
               

               Cow position:
               chr1:10881679-10881420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               437-542
               

               Cow position:
               chr1:53520765-53520660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               88
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               437-680
               

               Cow position:
               chr1:98613100-98612852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               183, 86
               

               Conread position:
               438-568
               

               Cow position:
               chr1:65144603-65144733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               443-633
               

               Cow position:
               chr1:31871273-31871087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               177, 135
               

               Conread position:
               443-679
               

               Cow position:
               chr1:82337932-82338169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               83, 51
               

               Conread position:
               443-680
               

               Cow position:
               chr1:63905622-63905856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               142, 33
               

               Conread position:
               445-680
               

               Cow position:
               chr1:70534083-70534321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               175, 133
               

               Conread position:
               461-633
               

               Cow position:
               chr1:32072233-32072407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               84, 38
               

               Conread position:
               543-680
               

               Cow position:
               chr1:79328973-79329121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               428-680
               

               Cow position:
               chr10:59675767-59676014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               9, 150
               

               Conread position:
               429-532
               

               Cow position:
               chr10:59152027-59152130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               37, 33
               

               Conread position:
               429-542
               

               Cow position:
               chr10:24752992-24752881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               429-555
               

               Cow position:
               chr10:20735543-20735417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               91, 7
               

               Conread position:
               429-638
               

               Cow position:
               chr10:55097844-55098048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               9, 81
               

               Conread position:
               432-550
               

               Cow position:
               chr10:4311021-4310903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               432-556
               

               Cow position:
               chr10:49846609-49846485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-540
               

               Cow position:
               chr10:19895231-19895125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               433-542
               

               Cow position:
               chr10:35857222-35857331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               50, 71
               

               Conread position:
               433-542
               

               Cow position:
               chr10:41737138-41737032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               433-556
               

               Cow position:
               chr10:52569424-52569304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               433-557
               

               Cow position:
               chr10:10699678-10699802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-658
               

               Cow position:
               chr10:61305113-61304891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               172, 90
               

               Conread position:
               433-676
               

               Cow position:
               chr10:6173192-6172945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               94, 155
               

               Conread position:
               433-680
               

               Cow position:
               chr10:15293107-15292847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               16, 67
               

               Conread position:
               433-680
               

               Cow position:
               chr10:29360740-29360480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               192
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               434-542
               

               Cow position:
               chr10:19402766-19402659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               437-618
               

               Cow position:
               chr10:37235725-37235902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               151
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               437-620
               

               Cow position:
               chr10:49456248-49456434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               97, 151
               

               Conread position:
               438-614
               

               Cow position:
               chr10:38014200-38014022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               143
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               441-680
               

               Cow position:
               chr10:53179128-53178885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               75, 125
               

               Conread position:
               443-598
               

               Cow position:
               chr10:41941758-41941914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               443-639
               

               Cow position:
               chr10:5745141-5745346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               100, 161
               

               Conread position:
               443-678
               

               Cow position:
               chr10:15498839-15499088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               149, 110
               

               Conread position:
               449-633
               

               Cow position:
               chr10:52296313-52296121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               96, 74
               

               Conread position:
               449-639
               

               Cow position:
               chr10:16432491-16432681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               153
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               171, 145
               

               Conread position:
               449-639
               

               Cow position:
               chr10:42459521-42459706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               171, 81
               

               Conread position:
               462-680
               

               Cow position:
               chr10:24276943-24277154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               122, 64
               

               Conread position:
               496-680
               

               Cow position:
               chr10:17705676-17705496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               49, 103
               

               Conread position:
               429-542
               

               Cow position:
               chr11:52381029-52381142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               429-562
               

               Cow position:
               chr11:31885362-31885227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               88, 125
               

               Conread position:
               429-680
               

               Cow position:
               chr11:56654387-56654124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               136, 7
               

               Conread position:
               430-556
               

               Cow position:
               chr11:68910007-68910134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               432-571
               

               Cow position:
               chr11:41104769-41104910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               33, 59
               

               Conread position:
               433-541
               

               Cow position:
               chr11:17968738-17968846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-548
               

               Cow position:
               chr11:47125403-47125288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-555
               

               Cow position:
               chr11:60302120-60302242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-668
               

               Cow position:
               chr11:25165281-25165031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               110, 87
               

               Conread position:
               436-680
               

               Cow position:
               chr11:51144552-51144296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               159, 194
               

               Conread position:
               437-680
               

               Cow position:
               chr11:67345216-67345451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               438-556
               

               Cow position:
               chr11:65857690-65857572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               441-628
               

               Cow position:
               chr11:80012005-80012188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               179, 70
               

               Conread position:
               443-676
               

               Cow position:
               chr11:40608894-40609136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 18
               

               Conread position:
               449-679
               

               Cow position:
               chr11:81162611-81162838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               171, 8
               

               Conread position:
               543-639
               

               Cow position:
               chr11:40292871-40292969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               426-671
               

               Cow position:
               chr12:11498236-11498484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               11, 48
               

               Conread position:
               429-613
               

               Cow position:
               chr12:27563010-27563187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               7, 109
               

               Conread position:
               429-668
               

               Cow position:
               chr12:4190996-4190742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               11, 7
               

               Conread position:
               431-556
               

               Cow position:
               chr12:10461825-10461701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               433-542
               

               Cow position:
               chr12:11109587-11109479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               433-542
               

               Cow position:
               chr12:17495374-17495483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-542
               

               Cow position:
               chr12:31925468-31925359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-542
               

               Cow position:
               chr12:32391663-32391554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-552
               

               Cow position:
               chr12:18123504-18123386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               433-557
               

               Cow position:
               chr12:19866060-19865936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-680
               

               Cow position:
               chr12:27365460-27365211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               187, 85
               

               Conread position:
               433-680
               

               Cow position:
               chr12:48415695-48415936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               201, 87
               

               Conread position:
               434-542
               

               Cow position:
               chr12:5905874-5905766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               438-660
               

               Cow position:
               chr12:25619564-25619788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               29, 86
               

               Conread position:
               441-568
               

               Cow position:
               chr12:6410918-6411045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               443-639
               

               Cow position:
               chr12:4004790-4004593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               153, 80
               

               Conread position:
               444-679
               

               Cow position:
               chr12:12939123-12939353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               23, 80
               

               Conread position:
               445-675
               

               Cow position:
               chr12:17708521-17708286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               182, 140
               

               Conread position:
               543-679
               

               Cow position:
               chr12:31218185-31218037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               421-542
               

               Cow position:
               chr13:34941540-34941419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               21, 12
               

               Conread position:
               426-531
               

               Cow position:
               chr13:34261354-34261459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               426-552
               

               Cow position:
               chr13:38278015-38277889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               429-557
               

               Cow position:
               chr13:23270088-23269960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               429-678
               

               Cow position:
               chr13:43594989-43594737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               160, 7
               

               Conread position:
               433-541
               

               Cow position:
               chr13:2339559-2339666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               433-552
               

               Cow position:
               chr13:60436754-60436635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-554
               

               Cow position:
               chr13:37069478-37069599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               106, 114
               

               Conread position:
               433-555
               

               Cow position:
               chr13:18989834-18989956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-558
               

               Cow position:
               chr13:34728708-34728585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               433-603
               

               Cow position:
               chr13:52879537-52879699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               16, 94
               

               Conread position:
               433-666
               

               Cow position:
               chr13:33517795-33517571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               170, 129
               

               Conread position:
               433-680
               

               Cow position:
               chr13:22780075-22780340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 90
               

               Conread position:
               434-556
               

               Cow position:
               chr13:58043759-58043880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               434-680
               

               Cow position:
               chr13:9570118-9570368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               186, 28
               

               Conread position:
               434-680
               

               Cow position:
               chr13:48251864-48251628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 152
               

               Conread position:
               436-535
               

               Cow position:
               chr13:15041340-15041241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               82
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               437-558
               

               Cow position:
               chr13:11290688-11290566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               44, 112
               

               Conread position:
               437-593
               

               Cow position:
               chr13:23166963-23166808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               437-678
               

               Cow position:
               chr13:57745966-57745737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               440-680
               

               Cow position:
               chr13:11825750-11825994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               8, 82
               

               Conread position:
               443-676
               

               Cow position:
               chr13:14063385-14063151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               177, 77
               

               Conread position:
               443-679
               

               Cow position:
               chr13:42200758-42201008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               102, 80
               

               Conread position:
               444-626
               

               Cow position:
               chr13:30674003-30673816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               101, 18
               

               Conread position:
               481-680
               

               Cow position:
               chr13:606878-606659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               64, 9
               

               Conread position:
               486-639
               

               Cow position:
               chr13:53069647-53069800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               134, 102
               

               Conread position:
               429-675
               

               Cow position:
               chr14:41128073-41128320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 90
               

               Conread position:
               432-554
               

               Cow position:
               chr14:39774869-39774747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               432-614
               

               Cow position:
               chr14:14187519-14187697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               433-533
               

               Cow position:
               chr14:33538739-33538638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               433-550
               

               Cow position:
               chr14:35651019-35650902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               87, 68
               

               Conread position:
               436-529
               

               Cow position:
               chr14:24786123-24786215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               80
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               436-561
               

               Cow position:
               chr14:15032945-15033071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               437-599
               

               Cow position:
               chr14:3588256-3588108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               16, 58
               

               Conread position:
               437-673
               

               Cow position:
               chr14:43031999-43032236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               183, 48
               

               Conread position:
               438-550
               

               Cow position:
               chr14:45848891-45848779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               442-541
               

               Cow position:
               chr14:14466283-14466185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               443-618
               

               Cow position:
               chr14:27104291-27104469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               101, 158
               

               Conread position:
               443-678
               

               Cow position:
               chr14:45292724-45292484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               177, 100
               

               Conread position:
               444-639
               

               Cow position:
               chr14:23107526-23107726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               16, 10
               

               Conread position:
               429-540
               

               Cow position:
               chr15:10283923-10284034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               429-555
               

               Cow position:
               chr15:49738818-49738692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               432-542
               

               Cow position:
               chr15:29792680-29792570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-533
               

               Cow position:
               chr15:21421176-21421274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               433-556
               

               Cow position:
               chr15:23865796-23865673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               72, 91
               

               Conread position:
               433-639
               

               Cow position:
               chr15:17100482-17100284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               8, 91
               

               Conread position:
               436-531
               

               Cow position:
               chr15:22939097-22939002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               80
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               437-565
               

               Cow position:
               chr15:14322826-14322698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               437-577
               

               Cow position:
               chr15:8230344-8230203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               437-678
               

               Cow position:
               chr15:14577663-14577915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               183, 0
               

               Conread position:
               441-674
               

               Cow position:
               chr15:24994284-24994056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               179, 82
               

               Conread position:
               442-680
               

               Cow position:
               chr15:36782090-36781854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               178, 93
               

               Conread position:
               449-680
               

               Cow position:
               chr15:38732383-38732154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               472-639
               

               Cow position:
               chr15:14337479-14337647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               148, 18
               

               Conread position:
               398-680
               

               Cow position:
               chr16:48145504-48145808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               224
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               32, 237
               

               Conread position:
               427-595
               

               Cow position:
               chr16:11422175-11422003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               10, 163
               

               Conread position:
               429-540
               

               Cow position:
               chr16:42633893-42633999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               429-680
               

               Cow position:
               chr16:23681232-23680968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 176
               

               Conread position:
               432-552
               

               Cow position:
               chr16:51399889-51400009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               432-640
               

               Cow position:
               chr16:50661092-50661307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               433-556
               

               Cow position:
               chr16:8706694-8706818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               433-680
               

               Cow position:
               chr16:14242233-14241984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               8, 121
               

               Conread position:
               435-542
               

               Cow position:
               chr16:15370533-15370427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               436-633
               

               Cow position:
               chr16:52218942-52218748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               184, 149
               

               Conread position:
               436-656
               

               Cow position:
               chr16:45799770-45799553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               184, 84
               

               Conread position:
               437-630
               

               Cow position:
               chr16:47518702-47518499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               438-680
               

               Cow position:
               chr16:8959212-8959465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               182, 0
               

               Conread position:
               445-680
               

               Cow position:
               chr16:11523084-11523315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               175, 25
               

               Conread position:
               481-680
               

               Cow position:
               chr16:3821009-3820798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               167
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               511-639
               

               Cow position:
               chr16:40732016-40731881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               33, 102
               

               Conread position:
               426-550
               

               Cow position:
               chr17:30718513-30718639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               428-593
               

               Cow position:
               chr17:6624160-6623993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               429-542
               

               Cow position:
               chr17:923778-923668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               429-554
               

               Cow position:
               chr17:12059191-12059310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               429-556
               

               Cow position:
               chr17:23337112-23337240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               429-557
               

               Cow position:
               chr17:26183122-26182995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               429-639
               

               Cow position:
               chr17:11832238-11832435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               191, 91
               

               Conread position:
               433-540
               

               Cow position:
               chr17:966842-966949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-560
               

               Cow position:
               chr17:5246792-5246666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               100, 90
               

               Conread position:
               433-680
               

               Cow position:
               chr17:5745350-5745585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               157, 25
               

               Conread position:
               433-680
               

               Cow position:
               chr17:24787120-24787388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               436-557
               

               Cow position:
               chr17:2275169-2275047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               439-680
               

               Cow position:
               chr17:6423648-6423403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               163, 28
               

               Conread position:
               441-678
               

               Cow position:
               chr17:20157504-20157249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               104, 79
               

               Conread position:
               443-674
               

               Cow position:
               chr17:24587505-24587253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               196
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               443-679
               

               Cow position:
               chr17:35180723-35180482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               152, 29
               

               Conread position:
               459-680
               

               Cow position:
               chr17:36791010-36790784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               119, 57
               

               Conread position:
               520-680
               

               Cow position:
               chr17:3270151-3269986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               110, 80
               

               Conread position:
               429-541
               

               Cow position:
               chr18:27078675-27078565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               432-679
               

               Cow position:
               chr18:33157646-33157386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               433-538
               

               Cow position:
               chr18:23447258-23447363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-613
               

               Cow position:
               chr18:31626509-31626329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               19, 47
               

               Conread position:
               435-632
               

               Cow position:
               chr18:20271198-20271405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               109, 179
               

               Conread position:
               436-680
               

               Cow position:
               chr18:4578646-4578892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               15, 173
               

               Conread position:
               437-614
               

               Cow position:
               chr18:20127283-20127463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               153, 86
               

               Conread position:
               437-636
               

               Cow position:
               chr18:42060899-42060686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               443-588
               

               Cow position:
               chr18:4515841-4515695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               443-680
               

               Cow position:
               chr18:33852068-33851829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               177, 117
               

               Conread position:
               443-680
               

               Cow position:
               chr18:36478009-36477754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               101, 77
               

               Conread position:
               508-680
               

               Cow position:
               chr18:56464088-56464270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               37, 95
               

               Conread position:
               428-541
               

               Cow position:
               chr19:8839455-8839340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               433-542
               

               Cow position:
               chr19:27104591-27104486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               433-542
               

               Cow position:
               chr19:31595144-31595035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-542
               

               Cow position:
               chr19:52381375-52381268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               433-564
               

               Cow position:
               chr19:9583160-9583029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-676
               

               Cow position:
               chr19:7492285-7492038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               8, 30
               

               Conread position:
               433-680
               

               Cow position:
               chr19:43418263-43418005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 79
               

               Conread position:
               435-680
               

               Cow position:
               chr19:11376562-11376811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               189
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               168, 150
               

               Conread position:
               437-639
               

               Cow position:
               chr19:19924763-19924966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               82, 165
               

               Conread position:
               444-598
               

               Cow position:
               chr19:35142183-35142336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               101, 36
               

               Conread position:
               428-556
               

               Cow position:
               chr2:22372083-22372211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               7, 94
               

               Conread position:
               429-534
               

               Cow position:
               chr2:51824787-51824684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               90
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               429-542
               

               Cow position:
               chr2:56771703-56771591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               429-542
               

               Cow position:
               chr2:82581068-82581183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               429-549
               

               Cow position:
               chr2:26318494-26318372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               429-673
               

               Cow position:
               chr2:76110257-76110027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               11, 125
               

               Conread position:
               429-680
               

               Cow position:
               chr2:41157834-41157568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               26, 7
               

               Conread position:
               433-556
               

               Cow position:
               chr2:13582439-13582318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               433-556
               

               Cow position:
               chr2:21171255-21171132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-556
               

               Cow position:
               chr2:43624670-43624793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-594
               

               Cow position:
               chr2:6063160-6063320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               433-639
               

               Cow position:
               chr2:32408630-32408827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               161, 25
               

               Conread position:
               433-639
               

               Cow position:
               chr2:46745780-46745572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               64, 115
               

               Conread position:
               433-680
               

               Cow position:
               chr2:41248424-41248163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               134, 63
               

               Conread position:
               436-542
               

               Cow position:
               chr2:8295688-8295582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               436-679
               

               Cow position:
               chr2:85281259-85281498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               82, 68
               

               Conread position:
               437-679
               

               Cow position:
               chr2:2689025-2688781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               183, 86
               

               Conread position:
               440-648
               

               Cow position:
               chr2:45880914-45881124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               8, 109
               

               Conread position:
               440-679
               

               Cow position:
               chr2:29802258-29802495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               87, 63
               

               Conread position:
               443-550
               

               Cow position:
               chr2:25282954-25282847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               100, 105
               

               Conread position:
               443-596
               

               Cow position:
               chr2:25928299-25928149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               443-669
               

               Cow position:
               chr2:21698842-21698615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               5, 111
               

               Conread position:
               443-680
               

               Cow position:
               chr2:6720703-6720465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               98, 179
               

               Conread position:
               443-680
               

               Cow position:
               chr2:10320108-10320354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               107, 55
               

               Conread position:
               443-680
               

               Cow position:
               chr2:36044503-36044771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               443-680
               

               Cow position:
               chr2:40427956-40428199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               177, 219
               

               Conread position:
               449-680
               

               Cow position:
               chr2:50766329-50766088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               116, 165
               

               Conread position:
               449-680
               

               Cow position:
               chr2:70933309-70933549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               63, 145
               

               Conread position:
               480-638
               

               Cow position:
               chr2:58770723-58770572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               140, 19
               

               Conread position:
               525-640
               

               Cow position:
               chr2:19153972-19154088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               533-675
               

               Cow position:
               chr2:54882955-54882804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               92, 63
               

               Conread position:
               427-557
               

               Cow position:
               chr20:9379316-9379184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               9, 126
               

               Conread position:
               427-679
               

               Cow position:
               chr20:36256585-36256322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               193, 6
               

               Conread position:
               429-542
               

               Cow position:
               chr20:23679243-23679356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-541
               

               Cow position:
               chr20:15593195-15593087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-542
               

               Cow position:
               chr20:20201885-20201782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               433-586
               

               Cow position:
               chr20:14735575-14735422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               151, 90
               

               Conread position:
               433-624
               

               Cow position:
               chr20:22007399-22007211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               149, 26
               

               Conread position:
               433-680
               

               Cow position:
               chr20:14759761-14760031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               433-680
               

               Cow position:
               chr20:40511859-40512110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               192, 90
               

               Conread position:
               434-637
               

               Cow position:
               chr20:37195349-37195146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               190, 62
               

               Conread position:
               436-679
               

               Cow position:
               chr20:9006648-9006908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               108, 87
               

               Conread position:
               436-680
               

               Cow position:
               chr20:10759571-10759810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               6, 37
               

               Conread position:
               437-635
               

               Cow position:
               chr20:35009846-35010044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               104, 96
               

               Conread position:
               437-680
               

               Cow position:
               chr20:16157460-16157704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               458-606
               

               Cow position:
               chr20:29633117-29633255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               426-550
               

               Cow position:
               chr21:36642835-36642710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               427-680
               

               Cow position:
               chr21:21000099-21000352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               13, 57
               

               Conread position:
               432-680
               

               Cow position:
               chr21:8618195-8617935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               113, 160
               

               Conread position:
               433-542
               

               Cow position:
               chr21:28512452-28512343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-542
               

               Cow position:
               chr21:32535896-32535787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               434-556
               

               Cow position:
               chr21:17282622-17282500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               434-623
               

               Cow position:
               chr21:37361548-37361748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               437-577
               

               Cow position:
               chr21:5425895-5425757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               437-680
               

               Cow position:
               chr21:28944448-28944708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               439-542
               

               Cow position:
               chr21:44251912-44252015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               443-604
               

               Cow position:
               chr21:14464486-14464336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               443-639
               

               Cow position:
               chr21:24758979-24758791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               177, 100
               

               Conread position:
               443-680
               

               Cow position:
               chr21:3047594-3047362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               148, 74
               

               Conread position:
               443-680
               

               Cow position:
               chr21:10515842-10516088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               184, 102
               

               Conread position:
               443-680
               

               Cow position:
               chr21:12801837-12802083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 74
               

               Conread position:
               443-680
               

               Cow position:
               chr21:27614197-27613966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               172, 139
               

               Conread position:
               450-599
               

               Cow position:
               chr21:4594697-4594841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               455-680
               

               Cow position:
               chr21:28955423-28955179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               16, 161
               

               Conread position:
               552-680
               

               Cow position:
               chr21:10046073-10045934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               430-542
               

               Cow position:
               chr22:30954895-30954783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               432-542
               

               Cow position:
               chr22:11257881-11257992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               432-680
               

               Cow position:
               chr22:12892713-12892970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               433-542
               

               Cow position:
               chr22:21012243-21012134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-542
               

               Cow position:
               chr22:26106911-26106802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-566
               

               Cow position:
               chr22:1710427-1710296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               433-576
               

               Cow position:
               chr22:845755-845613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               433-617
               

               Cow position:
               chr22:1590876-1590678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 37
               

               Conread position:
               433-680
               

               Cow position:
               chr22:6497641-6497906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               27, 82
               

               Conread position:
               434-673
               

               Cow position:
               chr22:30963983-30963743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               7, 29
               

               Conread position:
               434-680
               

               Cow position:
               chr22:35902846-35903086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               185, 28
               

               Conread position:
               437-677
               

               Cow position:
               chr22:34886513-34886271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               105, 86
               

               Conread position:
               437-679
               

               Cow position:
               chr22:22612961-22612713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               91, 159
               

               Conread position:
               441-564
               

               Cow position:
               chr22:26760014-26759895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               443-631
               

               Cow position:
               chr22:9520989-9520806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               177, 73
               

               Conread position:
               443-668
               

               Cow position:
               chr22:44390036-44390276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               443-679
               

               Cow position:
               chr22:13210471-13210235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               155, 83
               

               Conread position:
               444-599
               

               Cow position:
               chr22:26658897-26658741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               444-680
               

               Cow position:
               chr22:34750519-34750266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               449-680
               

               Cow position:
               chr22:23833132-23832904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               137, 71
               

               Conread position:
               490-639
               

               Cow position:
               chr22:17125266-17125123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               130, 95
               

               Conread position:
               543-639
               

               Cow position:
               chr22:534212-534114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               426-542
               

               Cow position:
               chr23:7937676-7937790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               429-680
               

               Cow position:
               chr23:25358600-25358327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               58, 7
               

               Conread position:
               433-541
               

               Cow position:
               chr23:28053134-28053027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               433-556
               

               Cow position:
               chr23:1923978-1924098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               433-558
               

               Cow position:
               chr23:11129092-11128967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-668
               

               Cow position:
               chr23:29242808-29242549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               437-550
               

               Cow position:
               chr23:10415172-10415285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               443-674
               

               Cow position:
               chr23:29742233-29741997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               86, 134
               

               Conread position:
               445-673
               

               Cow position:
               chr23:11933084-11932864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               35, 142
               

               Conread position:
               449-639
               

               Cow position:
               chr23:20192426-20192247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               176, 133
               

               Conread position:
               451-678
               

               Cow position:
               chr23:28700842-28700619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               177, 114
               

               Conread position:
               471-678
               

               Cow position:
               chr23:2269472-2269675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               149, 44
               

               Conread position:
               428-633
               

               Cow position:
               chr24:27608259-27608473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               429-552
               

               Cow position:
               chr24:36554994-36555115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               433-542
               

               Cow position:
               chr24:6900656-6900547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-556
               

               Cow position:
               chr24:3493724-3493602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               433-557
               

               Cow position:
               chr24:38375117-38374993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               32, 91
               

               Conread position:
               433-674
               

               Cow position:
               chr24:43432629-43432402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               434-679
               

               Cow position:
               chr24:2730739-2730969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               188
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               186, 112
               

               Conread position:
               435-639
               

               Cow position:
               chr24:18975030-18974821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               110, 88
               

               Conread position:
               437-639
               

               Cow position:
               chr24:39607723-39607928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               16, 158
               

               Conread position:
               438-675
               

               Cow position:
               chr24:27096512-27096274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               187, 109
               

               Conread position:
               443-593
               

               Cow position:
               chr24:25112026-25111878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               8, 140
               

               Conread position:
               443-671
               

               Cow position:
               chr24:27563850-27564073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               177, 51
               

               Conread position:
               443-679
               

               Cow position:
               chr24:40184445-40184190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 60
               

               Conread position:
               429-542
               

               Cow position:
               chr25:17712391-17712279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               429-556
               

               Cow position:
               chr25:12204328-12204201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               429-680
               

               Cow position:
               chr25:18310659-18310404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               11, 40
               

               Conread position:
               430-556
               

               Cow position:
               chr25:36761963-36761837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-556
               

               Cow position:
               chr25:17658467-17658346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               433-606
               

               Cow position:
               chr25:24452314-24452488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               52, 76
               

               Conread position:
               433-631
               

               Cow position:
               chr25:35344892-35344698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               187, 151
               

               Conread position:
               433-639
               

               Cow position:
               chr25:5407597-5407403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               187, 39
               

               Conread position:
               433-674
               

               Cow position:
               chr25:35612444-35612695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               194
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               79, 29
               

               Conread position:
               436-680
               

               Cow position:
               chr25:12081466-12081721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               46, 54
               

               Conread position:
               436-680
               

               Cow position:
               chr25:27510380-27510626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               184, 76
               

               Conread position:
               437-594
               

               Cow position:
               chr25:35625326-35625476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               437-639
               

               Cow position:
               chr25:11131431-11131237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               183, 80
               

               Conread position:
               437-680
               

               Cow position:
               chr25:18013249-18012990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               75, 57
               

               Conread position:
               543-678
               

               Cow position:
               chr25:12220046-12219906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               77, 66
               

               Conread position:
               429-518
               

               Cow position:
               chr26:33567166-33567255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               78
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               429-556
               

               Cow position:
               chr26:28442131-28442255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               431-542
               

               Cow position:
               chr26:30034530-30034641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               432-542
               

               Cow position:
               chr26:32897997-32898107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-542
               

               Cow position:
               chr26:25737344-25737235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-556
               

               Cow position:
               chr26:9491799-9491678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               433-639
               

               Cow position:
               chr26:16921818-16921607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               171
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               35, 173
               

               Conread position:
               436-679
               

               Cow position:
               chr26:613799-614038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               15, 149
               

               Conread position:
               437-542
               

               Cow position:
               chr26:6714414-6714519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               443-542
               

               Cow position:
               chr26:35704249-35704149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               447-656
               

               Cow position:
               chr26:22622842-22622620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               487-633
               

               Cow position:
               chr26:14924318-14924173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               133, 59
               

               Conread position:
               429-542
               

               Cow position:
               chr27:25380087-25380200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               429-680
               

               Cow position:
               chr27:6058593-6058847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               7, 100
               

               Conread position:
               431-656
               

               Cow position:
               chr27:12596856-12597092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               13, 53
               

               Conread position:
               433-542
               

               Cow position:
               chr27:24227693-24227584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-680
               

               Cow position:
               chr27:10307203-10306954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               28, 121
               

               Conread position:
               435-668
               

               Cow position:
               chr27:25676327-25676576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               18, 210
               

               Conread position:
               437-632
               

               Cow position:
               chr27:25998809-25999012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               437-680
               

               Cow position:
               chr27:2847997-2848237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               76, 35
               

               Conread position:
               438-680
               

               Cow position:
               chr27:21578497-21578250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               182, 144
               

               Conread position:
               443-550
               

               Cow position:
               chr27:21669014-21668908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               481-680
               

               Cow position:
               chr27:7648417-7648212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               144, 36
               

               Conread position:
               427-680
               

               Cow position:
               chr28:27428618-27428363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               14, 32
               

               Conread position:
               429-541
               

               Cow position:
               chr28:13241959-13242070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               429-556
               

               Cow position:
               chr28:3144024-3144151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               7, 95
               

               Conread position:
               429-556
               

               Cow position:
               chr28:5771234-5771105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               98, 7
               

               Conread position:
               433-528
               

               Cow position:
               chr28:34844388-34844483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-550
               

               Cow position:
               chr28:3024050-3024167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-680
               

               Cow position:
               chr28:12048838-12049073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               434-541
               

               Cow position:
               chr28:32813139-32813245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               434-549
               

               Cow position:
               chr28:34878112-34878227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               436-633
               

               Cow position:
               chr28:23621406-23621205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               107, 87
               

               Conread position:
               436-639
               

               Cow position:
               chr28:21873631-21873438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               184, 146
               

               Conread position:
               437-551
               

               Cow position:
               chr28:19564734-19564849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               437-563
               

               Cow position:
               chr28:11827351-11827228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               437-679
               

               Cow position:
               chr28:31415570-31415817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               166, 83
               

               Conread position:
               440-542
               

               Cow position:
               chr28:7328757-7328655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               443-678
               

               Cow position:
               chr28:23459996-23459754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               84, 91
               

               Conread position:
               444-677
               

               Cow position:
               chr28:22081426-22081189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               180, 45
               

               Conread position:
               576-678
               

               Cow position:
               chr28:34008198-34008301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               44, 68
               

               Conread position:
               428-531
               

               Cow position:
               chr29:41747299-41747197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               430-679
               

               Cow position:
               chr29:18521166-18521411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               89, 74
               

               Conread position:
               433-541
               

               Cow position:
               chr29:6014956-6014850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               433-542
               

               Cow position:
               chr29:31928836-31928725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               42, 69
               

               Conread position:
               433-639
               

               Cow position:
               chr29:2522429-2522231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               191, 35
               

               Conread position:
               433-639
               

               Cow position:
               chr29:16662938-16662740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               94, 18
               

               Conread position:
               433-639
               

               Cow position:
               chr29:41530704-41530490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               111, 90
               

               Conread position:
               433-680
               

               Cow position:
               chr29:25088608-25088368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               437-675
               

               Cow position:
               chr29:94698-94929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               197, 80
               

               Conread position:
               439-680
               

               Cow position:
               chr29:16195700-16195461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               199, 10
               

               Conread position:
               440-639
               

               Cow position:
               chr29:2885603-2885807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               96, 193
               

               Conread position:
               444-680
               

               Cow position:
               chr29:2623636-2623881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               150, 140
               

               Conread position:
               450-680
               

               Cow position:
               chr29:43516843-43517090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               473-680
               

               Cow position:
               chr29:13028272-13028068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               64, 109
               

               Conread position:
               421-542
               

               Cow position:
               chr3:50329230-50329351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               426-542
               

               Cow position:
               chr3:29172222-29172107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               426-556
               

               Cow position:
               chr3:54960029-54959901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               427-542
               

               Cow position:
               chr3:79292673-79292558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               427-564
               

               Cow position:
               chr3:58865619-58865757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               428-542
               

               Cow position:
               chr3:42423494-42423607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               429-542
               

               Cow position:
               chr3:53046820-53046933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               429-680
               

               Cow position:
               chr3:51234258-51234505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               18, 101
               

               Conread position:
               431-538
               

               Cow position:
               chr3:29596228-29596121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               95, 5
               

               Conread position:
               433-556
               

               Cow position:
               chr3:3032228-3032108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               36, 53
               

               Conread position:
               433-639
               

               Cow position:
               chr3:73759683-73759880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               21, 70
               

               Conread position:
               433-665
               

               Cow position:
               chr3:23471631-23471874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               433-668
               

               Cow position:
               chr3:73467455-73467210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               20, 52
               

               Conread position:
               433-674
               

               Cow position:
               chr3:17895684-17895432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               121, 39
               

               Conread position:
               436-567
               

               Cow position:
               chr3:49784141-49784010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               436-680
               

               Cow position:
               chr3:49388675-49388433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               89, 111
               

               Conread position:
               436-680
               

               Cow position:
               chr3:59333596-59333342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               86, 13
               

               Conread position:
               437-558
               

               Cow position:
               chr3:11640263-11640142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               437-562
               

               Cow position:
               chr3:38497780-38497656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               437-680
               

               Cow position:
               chr3:54862590-54862837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               24, 111
               

               Conread position:
               441-680
               

               Cow position:
               chr3:33468656-33468889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               93, 143
               

               Conread position:
               441-680
               

               Cow position:
               chr3:39171659-39171893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               162, 153
               

               Conread position:
               443-679
               

               Cow position:
               chr3:17937016-17937239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               443-679
               

               Cow position:
               chr3:39970049-39970283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               159, 103
               

               Conread position:
               443-679
               

               Cow position:
               chr3:42914275-42914036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               182, 47
               

               Conread position:
               443-680
               

               Cow position:
               chr3:33693472-33693236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               178, 101
               

               Conread position:
               443-680
               

               Cow position:
               chr3:48275649-48275409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               177, 80
               

               Conread position:
               443-680
               

               Cow position:
               chr3:48629762-48630002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               84, 150
               

               Conread position:
               443-680
               

               Cow position:
               chr3:56102259-56102023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               87, 49
               

               Conread position:
               443-680
               

               Cow position:
               chr3:64281113-64281348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               177, 121
               

               Conread position:
               485-680
               

               Cow position:
               chr3:27867642-27867442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               135, 83
               

               Conread position:
               558-680
               

               Cow position:
               chr3:31119918-31120049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               63, 30
               

               Conread position:
               426-535
               

               Cow position:
               chr4:10993693-10993803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               19, 99
               

               Conread position:
               426-542
               

               Cow position:
               chr4:10968529-10968645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               429-542
               

               Cow position:
               chr4:58248259-58248148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               429-554
               

               Cow position:
               chr4:47280270-47280400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               429-555
               

               Cow position:
               chr4:22010206-22010331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               429-680
               

               Cow position:
               chr4:488582-488861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               431-680
               

               Cow position:
               chr4:27287255-27287519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               432-540
               

               Cow position:
               chr4:39231673-39231781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               432-542
               

               Cow position:
               chr4:15904948-15904838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-541
               

               Cow position:
               chr4:33623567-33623459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-639
               

               Cow position:
               chr4:34630748-34630541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               166
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               125, 25
               

               Conread position:
               433-678
               

               Cow position:
               chr4:21371244-21371005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               8, 71
               

               Conread position:
               433-680
               

               Cow position:
               chr4:18812399-18812653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               20, 114
               

               Conread position:
               433-680
               

               Cow position:
               chr4:67408381-67408120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               90, 25
               

               Conread position:
               435-542
               

               Cow position:
               chr4:23646996-23647103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               436-639
               

               Cow position:
               chr4:15462427-15462630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               166
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               11, 62
               

               Conread position:
               437-576
               

               Cow position:
               chr4:5924678-5924817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               437-611
               

               Cow position:
               chr4:9714570-9714396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               106, 14
               

               Conread position:
               437-639
               

               Cow position:
               chr4:31175143-31174939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               183, 0
               

               Conread position:
               437-639
               

               Cow position:
               chr4:58687592-58687785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               183, 104
               

               Conread position:
               437-678
               

               Cow position:
               chr4:24686040-24686307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               437-679
               

               Cow position:
               chr4:9912573-9912304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               100, 57
               

               Conread position:
               439-668
               

               Cow position:
               chr4:3274690-3274925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               17, 108
               

               Conread position:
               443-542
               

               Cow position:
               chr4:14736333-14736232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               443-672
               

               Cow position:
               chr4:9482380-9482613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               171, 55
               

               Conread position:
               443-679
               

               Cow position:
               chr4:61624756-61624998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               177, 39
               

               Conread position:
               443-680
               

               Cow position:
               chr4:36755589-36755350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               177, 99
               

               Conread position:
               443-680
               

               Cow position:
               chr4:44072931-44073185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               429-542
               

               Cow position:
               chr5:12709773-12709659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               7, 96
               

               Conread position:
               429-542
               

               Cow position:
               chr5:43738065-43738175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               8, 89
               

               Conread position:
               429-542
               

               Cow position:
               chr5:45225937-45226051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               8, 58
               

               Conread position:
               429-618
               

               Cow position:
               chr5:32339090-32339282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               13, 9
               

               Conread position:
               432-566
               

               Cow position:
               chr5:68604741-68604608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               433-553
               

               Cow position:
               chr5:30253623-30253507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               433-639
               

               Cow position:
               chr5:54530868-54530665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               18, 151
               

               Conread position:
               433-668
               

               Cow position:
               chr5:9499207-9499453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               21, 164
               

               Conread position:
               433-668
               

               Cow position:
               chr5:49565259-49565042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               433-675
               

               Cow position:
               chr5:28230039-28229792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 151
               

               Conread position:
               433-680
               

               Cow position:
               chr5:2500307-2500533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               433-680
               

               Cow position:
               chr5:42744670-42744429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               187, 25
               

               Conread position:
               434-533
               

               Cow position:
               chr5:45036902-45036804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               85
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               435-680
               

               Cow position:
               chr5:57890379-57890131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 147
               

               Conread position:
               436-542
               

               Cow position:
               chr5:72310593-72310487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               437-532
               

               Cow position:
               chr5:60126251-60126156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               80
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               437-680
               

               Cow position:
               chr5:26046212-26045959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               14, 87
               

               Conread position:
               437-680
               

               Cow position:
               chr5:53835592-53835354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               147, 99
               

               Conread position:
               443-673
               

               Cow position:
               chr5:37714030-37714266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               35, 144
               

               Conread position:
               443-680
               

               Cow position:
               chr5:50900776-50900530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               102, 26
               

               Conread position:
               449-639
               

               Cow position:
               chr5:1460557-1460740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               7, 113
               

               Conread position:
               458-680
               

               Cow position:
               chr5:57156645-57156407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               462-633
               

               Cow position:
               chr5:37814476-37814306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               144
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               158, 84
               

               Conread position:
               462-680
               

               Cow position:
               chr5:34300780-34300551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               6, 134
               

               Conread position:
               426-557
               

               Cow position:
               chr6:18988118-18987989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               427-550
               

               Cow position:
               chr6:12337885-12337764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               429-553
               

               Cow position:
               chr6:14850814-14850937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               96, 110
               

               Conread position:
               429-558
               

               Cow position:
               chr6:28148150-28148022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               93, 7
               

               Conread position:
               432-680
               

               Cow position:
               chr6:49685482-49685233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               188, 150
               

               Conread position:
               433-541
               

               Cow position:
               chr6:19508535-19508642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               433-542
               

               Cow position:
               chr6:64431835-64431726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-631
               

               Cow position:
               chr6:36202724-36202521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               433-637
               

               Cow position:
               chr6:6995049-6995252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 106
               

               Conread position:
               433-639
               

               Cow position:
               chr6:14201598-14201390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               10, 132
               

               Conread position:
               433-674
               

               Cow position:
               chr6:16288524-16288776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               112, 18
               

               Conread position:
               433-680
               

               Cow position:
               chr6:40774451-40774696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               8, 138
               

               Conread position:
               433-680
               

               Cow position:
               chr6:66433844-66433590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 152
               

               Conread position:
               434-556
               

               Cow position:
               chr6:53345691-53345569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               434-680
               

               Cow position:
               chr6:66874256-66874002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               7, 18
               

               Conread position:
               436-639
               

               Cow position:
               chr6:48406456-48406251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 181
               

               Conread position:
               436-679
               

               Cow position:
               chr6:13717742-13717493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               184, 7
               

               Conread position:
               437-557
               

               Cow position:
               chr6:32867314-32867434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               437-591
               

               Cow position:
               chr6:56041730-56041888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               438-530
               

               Cow position:
               chr6:3592014-3591922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               80
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               441-679
               

               Cow position:
               chr6:14289446-14289693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               40, 35
               

               Conread position:
               443-639
               

               Cow position:
               chr6:51191700-51191513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               33, 78
               

               Conread position:
               443-639
               

               Cow position:
               chr6:65846561-65846765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               443-680
               

               Cow position:
               chr6:67968728-67968957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               74, 91
               

               Conread position:
               444-675
               

               Cow position:
               chr6:9323043-9322819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               449-639
               

               Cow position:
               chr6:22986111-22986294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               169, 74
               

               Conread position:
               450-680
               

               Cow position:
               chr6:67304680-67304455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               166, 73
               

               Conread position:
               451-639
               

               Cow position:
               chr6:19045263-19045062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               91, 79
               

               Conread position:
               533-673
               

               Cow position:
               chr6:47640667-47640816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               88, 52
               

               Conread position:
               427-680
               

               Cow position:
               chr7:16022207-16021944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               428-554
               

               Cow position:
               chr7:13219487-13219612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               429-542
               

               Cow position:
               chr7:39042507-39042393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               429-542
               

               Cow position:
               chr7:63085464-63085351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               429-556
               

               Cow position:
               chr7:268895-268771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               429-680
               

               Cow position:
               chr7:41445263-41445001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 94
               

               Conread position:
               430-526
               

               Cow position:
               chr7:14029237-14029141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               82
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               432-589
               

               Cow position:
               chr7:40321385-40321229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               113, 77
               

               Conread position:
               432-680
               

               Cow position:
               chr7:34569103-34568843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 142
               

               Conread position:
               432-680
               

               Cow position:
               chr7:37455222-37454966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               95, 171
               

               Conread position:
               433-541
               

               Cow position:
               chr7:66894642-66894750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-542
               

               Cow position:
               chr7:34004265-34004157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               433-542
               

               Cow position:
               chr7:46823567-46823457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               433-542
               

               Cow position:
               chr7:53613044-53612935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-556
               

               Cow position:
               chr7:28095784-28095661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-558
               

               Cow position:
               chr7:39930195-39930072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               433-645
               

               Cow position:
               chr7:46928887-46928678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               19, 121
               

               Conread position:
               433-680
               

               Cow position:
               chr7:20827717-20827961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               8, 12
               

               Conread position:
               433-680
               

               Cow position:
               chr7:24740938-24741199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               25, 92
               

               Conread position:
               435-680
               

               Cow position:
               chr7:25263267-25263001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               202
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               437-679
               

               Cow position:
               chr7:50095274-50095031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               184, 47
               

               Conread position:
               440-542
               

               Cow position:
               chr7:41293857-41293958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               440-680
               

               Cow position:
               chr7:25015231-25015495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               440-680
               

               Cow position:
               chr7:25023569-25023825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               198
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               105, 72
               

               Conread position:
               440-680
               

               Cow position:
               chr7:29346045-29346286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 142
               

               Conread position:
               441-675
               

               Cow position:
               chr7:47046369-47046135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               151, 62
               

               Conread position:
               442-542
               

               Cow position:
               chr7:32283802-32283702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               443-633
               

               Cow position:
               chr7:22730091-22729906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               154
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               182, 37
               

               Conread position:
               443-633
               

               Cow position:
               chr7:24718647-24718839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               159
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 58
               

               Conread position:
               443-638
               

               Cow position:
               chr7:2729047-2729245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               84, 124
               

               Conread position:
               443-639
               

               Cow position:
               chr7:23075448-23075644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               114, 14
               

               Conread position:
               443-639
               

               Cow position:
               chr7:29302467-29302659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               15, 102
               

               Conread position:
               443-680
               

               Cow position:
               chr7:14079280-14079531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               443-680
               

               Cow position:
               chr7:24213768-24213529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               177, 80
               

               Conread position:
               451-680
               

               Cow position:
               chr7:58867490-58867254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               187
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               169, 133
               

               Conread position:
               391-637
               

               Cow position:
               chr8:55323589-55323347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               159
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               229, 194
               

               Conread position:
               427-542
               

               Cow position:
               chr8:25579412-25579299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 74
               

               Conread position:
               427-636
               

               Cow position:
               chr8:9051145-9051354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               154, 9
               

               Conread position:
               431-550
               

               Cow position:
               chr8:38851752-38851637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               432-680
               

               Cow position:
               chr8:225497-225757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               196
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               188, 162
               

               Conread position:
               433-542
               

               Cow position:
               chr8:1303772-1303664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               433-542
               

               Cow position:
               chr8:25083136-25083027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-552
               

               Cow position:
               chr8:27955570-27955688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               433-557
               

               Cow position:
               chr8:33585028-33584901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               433-569
               

               Cow position:
               chr8:48955783-48955647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               108, 114
               

               Conread position:
               433-614
               

               Cow position:
               chr8:47136141-47136319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               18, 68
               

               Conread position:
               434-680
               

               Cow position:
               chr8:42794448-42794705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               110, 15
               

               Conread position:
               436-678
               

               Cow position:
               chr8:16093145-16092896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               86, 150
               

               Conread position:
               436-680
               

               Cow position:
               chr8:36858236-36858491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               5, 37
               

               Conread position:
               437-639
               

               Cow position:
               chr8:9288112-9287910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               183, 151
               

               Conread position:
               437-639
               

               Cow position:
               chr8:24867883-24868079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               164
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               188, 109
               

               Conread position:
               437-672
               

               Cow position:
               chr8:54231161-54230926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               198, 44
               

               Conread position:
               438-680
               

               Cow position:
               chr8:28670278-28670027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               165, 138
               

               Conread position:
               440-680
               

               Cow position:
               chr8:35583700-35583939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               441-680
               

               Cow position:
               chr8:46743477-46743707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               443-542
               

               Cow position:
               chr8:25349565-25349466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               83
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               443-678
               

               Cow position:
               chr8:58346665-58346433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 102
               

               Conread position:
               443-680
               

               Cow position:
               chr8:300160-300418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               101, 249
               

               Conread position:
               443-680
               

               Cow position:
               chr8:18763026-18762776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               444-680
               

               Cow position:
               chr8:5702563-5702796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               37, 81
               

               Conread position:
               445-661
               

               Cow position:
               chr8:32719833-32719609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               477-599
               

               Cow position:
               chr8:41905780-41905900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               426-680
               

               Cow position:
               chr9:25546800-25547068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               37, 10
               

               Conread position:
               428-639
               

               Cow position:
               chr9:24850410-24850614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               11, 116
               

               Conread position:
               429-680
               

               Cow position:
               chr9:30138295-30138538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               185, 94
               

               Conread position:
               429-680
               

               Cow position:
               chr9:35305951-35305694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               26, 10
               

               Conread position:
               430-679
               

               Cow position:
               chr9:41782064-41782330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               432-552
               

               Cow position:
               chr9:26099509-26099629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-540
               

               Cow position:
               chr9:18002776-18002669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-542
               

               Cow position:
               chr9:5319802-5319911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-542
               

               Cow position:
               chr9:18072944-18072836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               433-552
               

               Cow position:
               chr9:52484744-52484625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               104, 111
               

               Conread position:
               433-554
               

               Cow position:
               chr9:21888342-21888463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-556
               

               Cow position:
               chr9:36445796-36445917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               433-557
               

               Cow position:
               chr9:36354110-36353985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               433-571
               

               Cow position:
               chr9:17871934-17871797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               434-633
               

               Cow position:
               chr9:36999887-36999696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               165
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               186, 149
               

               Conread position:
               437-679
               

               Cow position:
               chr9:55365066-55365304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               149, 107
               

               Conread position:
               439-680
               

               Cow position:
               chr9:20579441-20579200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               186, 73
               

               Conread position:
               449-680
               

               Cow position:
               chr9:26310747-26310991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               429-542
               

               Cow position:
               chrX:41167076-41167190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               7, 96
               

               Conread position:
               429-550
               

               Cow position:
               chrX:33639857-33639737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               429-639
               

               Cow position:
               chrX:21004571-21004369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               24, 7
               

               Conread position:
               429-680
               

               Cow position:
               chrX:42282320-42282065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               16, 107
               

               Conread position:
               432-680
               

               Cow position:
               chrX:18287173-18287423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               203, 71
               

               Conread position:
               432-680
               

               Cow position:
               chrX:29032296-29032047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               190, 26
               

               Conread position:
               433-542
               

               Cow position:
               chrX:34238603-34238495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               433-554
               

               Cow position:
               chrX:40647860-40647740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               433-556
               

               Cow position:
               chrX:25238059-25237938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               433-556
               

               Cow position:
               chrX:38967533-38967410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-591
               

               Cow position:
               chrX:6640008-6639849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               433-632
               

               Cow position:
               chrX:20129090-20129287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               111, 56
               

               Conread position:
               433-633
               

               Cow position:
               chrX:34543669-34543481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               187, 51
               

               Conread position:
               433-636
               

               Cow position:
               chrX:35284507-35284298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               15, 159
               

               Conread position:
               433-680
               

               Cow position:
               chrX:1514519-1514765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               187, 9
               

               Conread position:
               433-680
               

               Cow position:
               chrX:11455175-11455408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               60, 22
               

               Conread position:
               434-542
               

               Cow position:
               chrX:37843602-37843494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               86
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               436-635
               

               Cow position:
               chrX:17122126-17122317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               180, 25
               

               Conread position:
               436-680
               

               Cow position:
               chrX:20168090-20167815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               437-639
               

               Cow position:
               chrX:42530576-42530773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               183, 12
               

               Conread position:
               437-674
               

               Cow position:
               chrX:47243399-47243635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               25, 146
               

               Conread position:
               443-602
               

               Cow position:
               chrX:2029262-2029108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               443-630
               

               Cow position:
               chrX:16416379-16416195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               154
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               173, 66
               

               Conread position:
               443-631
               

               Cow position:
               chrX:46984624-46984814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               86, 146
               

               Conread position:
               443-645
               

               Cow position:
               chrX:33519490-33519284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               443-675
               

               Cow position:
               chrX:44961620-44961379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               177, 148
               

               Conread position:
               443-679
               

               Cow position:
               chrX:37906837-37906614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               76, 106
               

               Conread position:
               443-680
               

               Cow position:
               chrX:46044917-46044680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               181, 137
               

               Conread position:
               445-680
               

               Cow position:
               chrX:7425336-7425091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               94, 104
               

               Conread position:
               511-675
               

               Cow position:
               chrX:10394490-10394309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               33, 0
Conread position:	421-679
Cow position:	chr1:6166128-6165868 (view UCSC Genome Browser custom track)
Alignm length:	274
Alignm identity:	196
Alignm E-value:	4e-27
Alignm gaps (pig, cow):	9, 23
Conread position:	426-551
Cow position:	chr1:67916906-67916781 (view UCSC Genome Browser custom track)
Alignm length:	127
Alignm identity:	99
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	75, 91
Conread position:	426-680
Cow position:	chr1:98023522-98023785 (view UCSC Genome Browser custom track)
Alignm length:	268
Alignm identity:	206
Alignm E-value:	0
Alignm gaps (pig, cow):	10, 170
Conread position:	428-556
Cow position:	chr1:51394291-51394159 (view UCSC Genome Browser custom track)
Alignm length:	134
Alignm identity:	105
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	62, 8
Conread position:	429-542
Cow position:	chr1:81355837-81355949 (view UCSC Genome Browser custom track)
Alignm length:	114
Alignm identity:	96
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	94, 0
Conread position:	429-680
Cow position:	chr1:22615757-22616020 (view UCSC Genome Browser custom track)
Alignm length:	265
Alignm identity:	196
Alignm E-value:	5.99994e-41
Alignm gaps (pig, cow):	16, 185
Conread position:	430-563
Cow position:	chr1:25856557-25856422 (view UCSC Genome Browser custom track)
Alignm length:	136
Alignm identity:	105
Alignm E-value:	9e-24
Alignm gaps (pig, cow):	90, 0
Conread position:	432-531
Cow position:	chr1:55357422-55357521 (view UCSC Genome Browser custom track)
Alignm length:	100
Alignm identity:	86
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	0, 0
Conread position:	433-556
Cow position:	chr1:52435133-52435010 (view UCSC Genome Browser custom track)
Alignm length:	124
Alignm identity:	94
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	0, 0
Conread position:	433-680
Cow position:	chr1:52913005-52913256 (view UCSC Genome Browser custom track)
Alignm length:	263
Alignm identity:	197
Alignm E-value:	4e-37
Alignm gaps (pig, cow):	59, 84
Conread position:	434-680
Cow position:	chr1:102825954-102826205 (view UCSC Genome Browser custom track)
Alignm length:	255
Alignm identity:	178
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	122, 17
Conread position:	436-680
Cow position:	chr1:10881679-10881420 (view UCSC Genome Browser custom track)
Alignm length:	260
Alignm identity:	202
Alignm E-value:	0
Alignm gaps (pig, cow):	18, 0
Conread position:	437-542
Cow position:	chr1:53520765-53520660 (view UCSC Genome Browser custom track)
Alignm length:	106
Alignm identity:	88
Alignm E-value:	9e-24
Alignm gaps (pig, cow):	0, 0
Conread position:	437-680
Cow position:	chr1:98613100-98612852 (view UCSC Genome Browser custom track)
Alignm length:	253
Alignm identity:	177
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	183, 86
Conread position:	438-568
Cow position:	chr1:65144603-65144733 (view UCSC Genome Browser custom track)
Alignm length:	131
Alignm identity:	101
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	0, 0
Conread position:	443-633
Cow position:	chr1:31871273-31871087 (view UCSC Genome Browser custom track)
Alignm length:	192
Alignm identity:	135
Alignm E-value:	9e-24
Alignm gaps (pig, cow):	177, 135
Conread position:	443-679
Cow position:	chr1:82337932-82338169 (view UCSC Genome Browser custom track)
Alignm length:	249
Alignm identity:	177
Alignm E-value:	4e-26
Alignm gaps (pig, cow):	83, 51
Conread position:	443-680
Cow position:	chr1:63905622-63905856 (view UCSC Genome Browser custom track)
Alignm length:	240
Alignm identity:	166
Alignm E-value:	4e-28
Alignm gaps (pig, cow):	142, 33
Conread position:	445-680
Cow position:	chr1:70534083-70534321 (view UCSC Genome Browser custom track)
Alignm length:	248
Alignm identity:	175
Alignm E-value:	4e-26
Alignm gaps (pig, cow):	175, 133
Conread position:	461-633
Cow position:	chr1:32072233-32072407 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	131
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	84, 38