Cow genome map

Conread name: Lym2-sn39_H10.f

Conread position: 67-300
Cow position: chr1:94253286-94253052 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 31

Conread position: 67-457
Cow position: chr1:55322690-55323077 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 17

Conread position: 69-419
Cow position: chr1:5319107-5318765 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 235
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 204, 22

Conread position: 70-427
Cow position: chr1:30027186-30027539 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 53

Conread position: 82-489
Cow position: chr1:79335452-79335859 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 96-377
Cow position: chr1:80555744-80556013 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 189
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 27, 115

Conread position: 97-362
Cow position: chr1:44138010-44138272 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 176

Conread position: 97-481
Cow position: chr1:21999619-22000002 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 233

Conread position: 97-481
Cow position: chr1:42736790-42736410 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 103

Conread position: 97-481
Cow position: chr1:72081116-72080726 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 0

Conread position: 97-481
Cow position: chr1:73070718-73071103 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 97-489
Cow position: chr1:3385683-3386061 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 0

Conread position: 97-489
Cow position: chr1:25179693-25180085 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 97-489
Cow position: chr1:49973853-49974245 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 97-489
Cow position: chr1:57366794-57367187 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 97-489
Cow position: chr1:62244309-62244702 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 97-489
Cow position: chr1:63605442-63605836 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 97-489
Cow position: chr1:69403318-69402938 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 194

Conread position: 97-489
Cow position: chr1:72981605-72981213 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 97-489
Cow position: chr1:76545200-76545597 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 215

Conread position: 97-489
Cow position: chr1:79456634-79457022 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 267

Conread position: 97-489
Cow position: chr1:91892785-91893173 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 163

Conread position: 100-282
Cow position: chr1:72039014-72039196 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 100-471
Cow position: chr1:82923843-82924214 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 277

Conread position: 100-481
Cow position: chr1:45098031-45097656 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 76

Conread position: 100-489
Cow position: chr1:57568287-57567896 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 100-489
Cow position: chr1:85780446-85780832 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 0

Conread position: 100-489
Cow position: chr1:89479639-89479267 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 100-489
Cow position: chr1:97226377-97226760 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 101-480
Cow position: chr1:31365742-31366122 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 10

Conread position: 103-489
Cow position: chr1:18244051-18244434 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 316

Conread position: 105-480
Cow position: chr1:62853511-62853889 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 202

Conread position: 106-481
Cow position: chr1:39481653-39482027 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 247
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 18, 117

Conread position: 108-481
Cow position: chr1:82918338-82918708 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 0

Conread position: 108-489
Cow position: chr1:58883741-58884122 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 108-489
Cow position: chr1:86698891-86699272 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 113-489
Cow position: chr1:56144017-56144392 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 216

Conread position: 116-481
Cow position: chr1:40684372-40684737 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 116-481
Cow position: chr1:61309322-61308956 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 116-484
Cow position: chr1:17012420-17012785 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 0

Conread position: 116-488
Cow position: chr1:86547816-86548187 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 0

Conread position: 117-481
Cow position: chr1:88635688-88635325 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 119-466
Cow position: chr1:31397006-31396659 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 119-489
Cow position: chr1:56193616-56193986 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-296
Cow position: chr1:21720202-21720027 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 121-476
Cow position: chr1:68607230-68607585 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-479
Cow position: chr1:88131084-88130726 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr1:8554642-8554282 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr1:8825363-8825004 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 121-481
Cow position: chr1:13646025-13645681 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 121-481
Cow position: chr1:18880079-18880439 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr1:28711230-28710870 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr1:38415111-38414754 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 121-481
Cow position: chr1:40053669-40053309 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr1:40308371-40308018 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 78

Conread position: 121-481
Cow position: chr1:69537210-69536856 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 105

Conread position: 121-481
Cow position: chr1:72657300-72656935 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 246

Conread position: 121-481
Cow position: chr1:89899392-89899748 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 18

Conread position: 121-481
Cow position: chr1:101150146-101149786 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-482
Cow position: chr1:28801087-28801467 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 121-484
Cow position: chr1:28723187-28722823 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 121-489
Cow position: chr1:52918315-52918674 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 252
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 262, 95

Conread position: 121-489
Cow position: chr1:62925927-62925559 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-489
Cow position: chr1:72186563-72186927 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 72

Conread position: 121-489
Cow position: chr1:100597058-100597436 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 122-488
Cow position: chr1:76752340-76752706 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 347

Conread position: 122-489
Cow position: chr1:76622644-76623012 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 123-427
Cow position: chr1:82356026-82355732 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 205
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 86, 0

Conread position: 123-481
Cow position: chr1:71562262-71562624 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 0

Conread position: 125-489
Cow position: chr1:13880429-13880081 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 247
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 294, 100

Conread position: 126-480
Cow position: chr1:82564812-82564458 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr1:11291797-11292150 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 125

Conread position: 126-481
Cow position: chr1:13450515-13450162 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 0

Conread position: 126-481
Cow position: chr1:20829198-20828843 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr1:29362605-29362250 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr1:30283234-30283588 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 0

Conread position: 126-481
Cow position: chr1:39544078-39543725 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 213

Conread position: 126-481
Cow position: chr1:42290691-42290347 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 126-481
Cow position: chr1:52232807-52233158 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 0

Conread position: 126-481
Cow position: chr1:59209830-59210185 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr1:60339614-60339259 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr1:67834832-67835185 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 126-481
Cow position: chr1:69766771-69766416 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr1:85791995-85791641 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 0

Conread position: 126-481
Cow position: chr1:89425882-89425541 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 126-481
Cow position: chr1:91899305-91898952 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 0

Conread position: 126-481
Cow position: chr1:101857678-101858030 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 126-482
Cow position: chr1:21087722-21087366 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-489
Cow position: chr1:12061890-12062251 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 127-478
Cow position: chr1:33851585-33851235 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 127-488
Cow position: chr1:58336143-58335783 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 234

Conread position: 131-489
Cow position: chr1:28873377-28873023 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 137-481
Cow position: chr1:56490138-56489794 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 140-489
Cow position: chr1:33551212-33550864 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 153-489
Cow position: chr1:48246095-48245757 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 153-489
Cow position: chr1:52358996-52359330 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 0

Conread position: 153-489
Cow position: chr1:55276203-55276540 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 159-489
Cow position: chr1:55776412-55776099 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 195-481
Cow position: chr1:33895920-33895633 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 252-481
Cow position: chr1:79920544-79920773 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 294-481
Cow position: chr1:25550197-25550017 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 85, 0

Conread position: 306-481
Cow position: chr1:15347456-15347631 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 323-489
Cow position: chr1:69922354-69922519 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 145, 0

Conread position: 42-479
Cow position: chr10:38545809-38546245 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 43

Conread position: 67-380
Cow position: chr10:8327879-8328194 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 114

Conread position: 67-420
Cow position: chr10:33346990-33346639 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 97-476
Cow position: chr10:11820693-11820315 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 249
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 27, 133

Conread position: 97-481
Cow position: chr10:16925897-16925512 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 113

Conread position: 97-489
Cow position: chr10:124671-124279 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 97-489
Cow position: chr10:8290340-8289952 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 139

Conread position: 97-489
Cow position: chr10:32651095-32650702 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 97-489
Cow position: chr10:37770183-37769792 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 98-486
Cow position: chr10:15861777-15862164 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 90

Conread position: 99-479
Cow position: chr10:22101589-22101211 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 0

Conread position: 100-479
Cow position: chr10:40152094-40152475 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 215

Conread position: 103-481
Cow position: chr10:29696586-29696214 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 351, 87

Conread position: 104-287
Cow position: chr10:22843102-22842921 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 106-319
Cow position: chr10:60192483-60192270 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 80, 61

Conread position: 119-489
Cow position: chr10:34317956-34318322 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 138

Conread position: 121-478
Cow position: chr10:62216944-62216587 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 279

Conread position: 121-481
Cow position: chr10:11685334-11685690 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 0

Conread position: 121-481
Cow position: chr10:39853673-39854037 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 0

Conread position: 121-481
Cow position: chr10:62778685-62778323 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 280

Conread position: 121-489
Cow position: chr10:1375870-1375504 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 290

Conread position: 121-489
Cow position: chr10:2122925-2123293 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-489
Cow position: chr10:19511943-19511575 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 112

Conread position: 121-489
Cow position: chr10:38345025-38345393 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 123-479
Cow position: chr10:25498687-25498331 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 124-474
Cow position: chr10:46694044-46694391 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 125-475
Cow position: chr10:40751980-40751634 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 245
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 190, 95

Conread position: 126-481
Cow position: chr10:14804168-14803812 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 35

Conread position: 126-481
Cow position: chr10:19495954-19496309 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr10:21400339-21400694 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr10:21740420-21740774 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 0

Conread position: 126-481
Cow position: chr10:41157779-41157425 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 0

Conread position: 126-481
Cow position: chr10:41567434-41567084 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 126-481
Cow position: chr10:41877250-41876896 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 126-481
Cow position: chr10:47907110-47906755 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-489
Cow position: chr10:39180115-39179753 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 0

Conread position: 138-447
Cow position: chr10:41389225-41389532 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 213
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 136, 86

Conread position: 140-489
Cow position: chr10:62408539-62408886 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 0

Conread position: 145-489
Cow position: chr10:7282374-7282716 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 0

Conread position: 158-489
Cow position: chr10:38538193-38538528 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 167-481
Cow position: chr10:39905232-39904905 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 236
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 140, 109

Conread position: 188-489
Cow position: chr10:19143066-19143369 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 126

Conread position: 230-481
Cow position: chr10:276817-276571 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 252-481
Cow position: chr10:54059150-54059377 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 106, 0

Conread position: 309-489
Cow position: chr10:60489803-60489629 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 313-481
Cow position: chr10:19840298-19840130 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 116
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 335-489
Cow position: chr10:29846486-29846640 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 67-334
Cow position: chr11:4065199-4065472 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 52, 0

Conread position: 67-489
Cow position: chr11:8283104-8282684 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 17

Conread position: 85-489
Cow position: chr11:4270849-4271262 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 360

Conread position: 85-489
Cow position: chr11:71329656-71329251 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 97-481
Cow position: chr11:72109965-72110345 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 293

Conread position: 97-488
Cow position: chr11:41170692-41171084 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 97-489
Cow position: chr11:26124931-26125325 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 97-489
Cow position: chr11:38835431-38835809 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 110

Conread position: 97-489
Cow position: chr11:58134387-58133977 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 100-473
Cow position: chr11:4027565-4027931 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 209

Conread position: 100-487
Cow position: chr11:45111366-45110973 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 276

Conread position: 100-489
Cow position: chr11:66726468-66726073 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 16

Conread position: 101-489
Cow position: chr11:85393814-85394203 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 295

Conread position: 103-481
Cow position: chr11:8261713-8262084 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 18

Conread position: 110-481
Cow position: chr11:8887171-8887537 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 163

Conread position: 112-243
Cow position: chr11:59369590-59369461 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 113-481
Cow position: chr11:12351080-12351453 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 316

Conread position: 119-481
Cow position: chr11:29668654-29669013 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 121-481
Cow position: chr11:5343242-5343602 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr11:20920770-20921130 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr11:36744205-36744565 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr11:37491671-37492033 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 73

Conread position: 121-481
Cow position: chr11:64045973-64045613 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr11:75920377-75920030 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 121-482
Cow position: chr11:25527533-25527187 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 165

Conread position: 121-489
Cow position: chr11:10847417-10847052 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 121-489
Cow position: chr11:44157278-44157628 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 123-481
Cow position: chr11:37065145-37065508 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 259

Conread position: 126-481
Cow position: chr11:19064279-19064634 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr11:32450837-32450483 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 0

Conread position: 126-481
Cow position: chr11:52419358-52419003 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr11:57628076-57628431 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr11:63659618-63659966 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 126-481
Cow position: chr11:67450468-67450113 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 158

Conread position: 126-481
Cow position: chr11:67846601-67846953 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 126-489
Cow position: chr11:3492981-3492618 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-489
Cow position: chr11:4041106-4041464 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 126-489
Cow position: chr11:15983594-15983231 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-489
Cow position: chr11:53287486-53287847 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 127-481
Cow position: chr11:37477149-37477504 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 137-476
Cow position: chr11:7113553-7113216 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 104

Conread position: 138-489
Cow position: chr11:10090294-10089941 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 183

Conread position: 140-489
Cow position: chr11:37093106-37093454 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 141-481
Cow position: chr11:12358470-12358806 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 0

Conread position: 142-489
Cow position: chr11:19102532-19102879 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 145-489
Cow position: chr11:77728569-77728920 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 146-481
Cow position: chr11:28229803-28230133 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 240

Conread position: 162-489
Cow position: chr11:9157499-9157818 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 181-481
Cow position: chr11:10210048-10210347 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 7

Conread position: 235-481
Cow position: chr11:44495734-44495982 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 44, 167

Conread position: 246-481
Cow position: chr11:15998743-15998510 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 91, 0

Conread position: 97-489
Cow position: chr12:11098529-11098136 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 104

Conread position: 97-489
Cow position: chr12:27932658-27933051 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 101-489
Cow position: chr12:28765737-28766126 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 0

Conread position: 113-489
Cow position: chr12:20997861-20998227 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 90

Conread position: 116-488
Cow position: chr12:8677854-8678227 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 86

Conread position: 117-489
Cow position: chr12:21902205-21901834 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 62

Conread position: 119-481
Cow position: chr12:25100797-25101159 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 119-489
Cow position: chr12:22205484-22205852 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 121-481
Cow position: chr12:8311443-8311088 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 0

Conread position: 121-489
Cow position: chr12:6406389-6406753 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 126-479
Cow position: chr12:21254399-21254751 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 0

Conread position: 126-481
Cow position: chr12:3056-2701 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 24

Conread position: 126-481
Cow position: chr12:32653801-32653447 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 0

Conread position: 126-481
Cow position: chr12:37558813-37558457 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 0

Conread position: 126-481
Cow position: chr12:43031128-43031481 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 127-481
Cow position: chr12:21426951-21426596 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 209-481
Cow position: chr12:21207868-21207597 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 0

Conread position: 214-481
Cow position: chr12:26141983-26141716 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 67-481
Cow position: chr13:54284660-54284262 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 50

Conread position: 70-483
Cow position: chr13:34937239-34936824 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 18

Conread position: 97-489
Cow position: chr13:31612270-31612662 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 123

Conread position: 97-489
Cow position: chr13:34042304-34042691 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 0

Conread position: 98-489
Cow position: chr13:15924318-15924711 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 100-481
Cow position: chr13:33927523-33927881 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 258
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 11, 115

Conread position: 100-481
Cow position: chr13:34186626-34187006 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 21

Conread position: 106-481
Cow position: chr13:3277206-3276839 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 108-489
Cow position: chr13:9044555-9044184 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 74

Conread position: 110-481
Cow position: chr13:56730236-56730602 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 9

Conread position: 116-489
Cow position: chr13:35757287-35756914 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 119-481
Cow position: chr13:3654281-3654629 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 139

Conread position: 119-489
Cow position: chr13:32737779-32738147 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 0

Conread position: 121-481
Cow position: chr13:4873117-4872758 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 121-481
Cow position: chr13:30656936-30657287 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 121-481
Cow position: chr13:33824694-33825048 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 121-481
Cow position: chr13:34693206-34692844 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 121-489
Cow position: chr13:4941129-4940760 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 0

Conread position: 121-489
Cow position: chr13:15520474-15520840 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 0

Conread position: 126-479
Cow position: chr13:2388782-2389139 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 0

Conread position: 126-481
Cow position: chr13:2296775-2297117 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 126-481
Cow position: chr13:13324785-13324432 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 0

Conread position: 126-481
Cow position: chr13:17308511-17308156 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr13:49973720-49973364 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 0

Conread position: 126-489
Cow position: chr13:21840158-21840521 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 127-480
Cow position: chr13:50109498-50109144 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 127-489
Cow position: chr13:1593119-1593480 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 259

Conread position: 145-480
Cow position: chr13:6668106-6668441 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 171-481
Cow position: chr13:23003527-23003834 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 209-479
Cow position: chr13:30244780-30245050 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 260-484
Cow position: chr13:2232563-2232338 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 282-489
Cow position: chr13:30302944-30302739 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 59, 0

Conread position: 328-489
Cow position: chr13:34868607-34868446 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 67-325
Cow position: chr14:33675784-33675524 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 29

Conread position: 67-427
Cow position: chr14:40339654-40339306 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 121

Conread position: 68-383
Cow position: chr14:12609151-12608846 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 220
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 24, 16

Conread position: 97-481
Cow position: chr14:19328326-19328711 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 97-489
Cow position: chr14:5529004-5528611 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 97-489
Cow position: chr14:7472310-7471924 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 68

Conread position: 97-489
Cow position: chr14:16919748-16920139 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 322

Conread position: 97-489
Cow position: chr14:48254363-48254761 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 308

Conread position: 100-325
Cow position: chr14:30706752-30706974 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 59

Conread position: 100-481
Cow position: chr14:45712053-45712419 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 100-489
Cow position: chr14:38532352-38532745 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 100-489
Cow position: chr14:50110506-50110121 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 240

Conread position: 102-479
Cow position: chr14:13302965-13302590 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 134

Conread position: 106-481
Cow position: chr14:44130844-44130476 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 110-369
Cow position: chr14:45770852-45771105 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 110-481
Cow position: chr14:36968182-36967812 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 110-481
Cow position: chr14:45851149-45850783 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 113-481
Cow position: chr14:44422479-44422113 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 0

Conread position: 113-481
Cow position: chr14:45767926-45767564 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 113-489
Cow position: chr14:28993929-28994305 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 117-487
Cow position: chr14:20782377-20782008 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 0

Conread position: 121-478
Cow position: chr14:44685960-44685609 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 0

Conread position: 121-481
Cow position: chr14:7830623-7830982 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 0

Conread position: 121-481
Cow position: chr14:13660069-13660431 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 31

Conread position: 121-481
Cow position: chr14:23690312-23690667 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 173

Conread position: 121-481
Cow position: chr14:23900883-23901243 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr14:41084864-41085225 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 154

Conread position: 121-484
Cow position: chr14:47624470-47624124 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 121-488
Cow position: chr14:30596467-30596830 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 93

Conread position: 121-489
Cow position: chr14:13864165-13864534 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 0

Conread position: 121-489
Cow position: chr14:16273380-16273746 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 121-489
Cow position: chr14:17001142-17001505 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 121-489
Cow position: chr14:17685313-17684945 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 19

Conread position: 121-489
Cow position: chr14:37223818-37223452 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 122-481
Cow position: chr14:37413972-37414331 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 96

Conread position: 122-489
Cow position: chr14:9102205-9102544 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 249
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 60, 0

Conread position: 123-369
Cow position: chr14:32533845-32534076 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 46, 35

Conread position: 123-479
Cow position: chr14:44855512-44855867 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 123-481
Cow position: chr14:44226312-44225965 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 0

Conread position: 124-489
Cow position: chr14:22031773-22032136 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 0

Conread position: 126-479
Cow position: chr14:750482-750129 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-479
Cow position: chr14:2284251-2283899 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 0

Conread position: 126-481
Cow position: chr14:9045478-9045123 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr14:23257271-23256917 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 0

Conread position: 126-481
Cow position: chr14:29047991-29048344 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 0

Conread position: 126-489
Cow position: chr14:45672133-45672495 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 131-481
Cow position: chr14:45029217-45029558 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 134-481
Cow position: chr14:30585048-30585387 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 140-486
Cow position: chr14:13479836-13480175 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 254

Conread position: 245-481
Cow position: chr14:45080313-45080078 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 46, 0

Conread position: 67-421
Cow position: chr15:1237291-1236939 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 242
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 39, 17

Conread position: 67-475
Cow position: chr15:36642584-36642190 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 67-481
Cow position: chr15:40105435-40105027 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 51

Conread position: 67-482
Cow position: chr15:51672324-51671912 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 236

Conread position: 67-489
Cow position: chr15:15265687-15266094 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 285
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 38, 205

Conread position: 97-396
Cow position: chr15:30810568-30810273 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 172
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 27, 114

Conread position: 97-456
Cow position: chr15:51216531-51216173 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 0

Conread position: 97-489
Cow position: chr15:6553914-6554303 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 97-489
Cow position: chr15:12421224-12421615 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 97-489
Cow position: chr15:18576657-18576271 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 245

Conread position: 97-489
Cow position: chr15:42491147-42490756 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 264

Conread position: 99-481
Cow position: chr15:8750368-8749986 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 112

Conread position: 99-489
Cow position: chr15:4649769-4649388 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 286

Conread position: 99-489
Cow position: chr15:6156011-6156403 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 100-393
Cow position: chr15:36626731-36627025 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 0

Conread position: 100-427
Cow position: chr15:8408494-8408165 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 124

Conread position: 100-489
Cow position: chr15:1764029-1763643 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 100-489
Cow position: chr15:4812260-4811875 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 72

Conread position: 101-481
Cow position: chr15:12615001-12614626 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 112

Conread position: 101-489
Cow position: chr15:4385208-4384826 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 320

Conread position: 104-481
Cow position: chr15:6078674-6078291 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 12

Conread position: 111-489
Cow position: chr15:7837172-7836795 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 0

Conread position: 116-481
Cow position: chr15:1772423-1772058 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 212

Conread position: 116-481
Cow position: chr15:36970848-36970483 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 117-484
Cow position: chr15:4733781-4733417 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 119-481
Cow position: chr15:3037591-3037951 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 269

Conread position: 119-489
Cow position: chr15:24295012-24294642 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-413
Cow position: chr15:11298899-11299183 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 190
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 276, 75

Conread position: 121-479
Cow position: chr15:7522575-7522927 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 121-481
Cow position: chr15:4169781-4170136 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 18

Conread position: 121-481
Cow position: chr15:7921724-7922082 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 121-481
Cow position: chr15:21665828-21666187 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 0

Conread position: 121-481
Cow position: chr15:21961426-21961066 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr15:25789051-25789409 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 121-481
Cow position: chr15:29009758-29009402 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 0

Conread position: 121-481
Cow position: chr15:32494468-32494827 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 121-481
Cow position: chr15:36648826-36648471 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 121-481
Cow position: chr15:41366093-41365739 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 121-489
Cow position: chr15:690708-690343 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 0

Conread position: 121-489
Cow position: chr15:2076566-2076198 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-489
Cow position: chr15:7544800-7544431 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 0

Conread position: 121-489
Cow position: chr15:15347201-15347569 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-489
Cow position: chr15:17039339-17039701 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 121-489
Cow position: chr15:18332910-18333276 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 0

Conread position: 121-489
Cow position: chr15:19738135-19738502 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 0

Conread position: 122-489
Cow position: chr15:4922069-4921695 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 324

Conread position: 126-481
Cow position: chr15:1519236-1519590 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 0

Conread position: 126-481
Cow position: chr15:1782168-1781813 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr15:1834547-1834901 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 0

Conread position: 126-481
Cow position: chr15:2647742-2648097 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr15:3009937-3010292 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr15:4196377-4196022 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr15:6472003-6472351 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 174

Conread position: 126-481
Cow position: chr15:18268073-18268428 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr15:28490227-28490582 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr15:50124028-50124380 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 127-481
Cow position: chr15:20749329-20748975 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 293

Conread position: 140-489
Cow position: chr15:42936613-42936265 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 0

Conread position: 151-481
Cow position: chr15:35735342-35735014 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 167-488
Cow position: chr15:3261543-3261855 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 28

Conread position: 186-481
Cow position: chr15:22920979-22920684 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 213-489
Cow position: chr15:32679730-32679998 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 200
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 33, 0

Conread position: 238-481
Cow position: chr15:21877555-21877798 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 261-481
Cow position: chr15:13428818-13428598 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 267-481
Cow position: chr15:22204340-22204554 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 307-489
Cow position: chr15:55934-55752 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 67, 57

Conread position: 313-483
Cow position: chr15:6650536-6650368 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 67-241
Cow position: chr16:25257228-25257055 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 16, 22

Conread position: 67-256
Cow position: chr16:16273209-16273398 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 35, 29

Conread position: 67-394
Cow position: chr16:49235524-49235848 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 180

Conread position: 67-481
Cow position: chr16:31375656-31376046 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 124

Conread position: 67-489
Cow position: chr16:25156594-25157016 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 200

Conread position: 67-489
Cow position: chr16:32935795-32935363 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 45

Conread position: 69-315
Cow position: chr16:29033340-29033094 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 35, 26

Conread position: 69-359
Cow position: chr16:18499729-18500014 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 20

Conread position: 70-489
Cow position: chr16:49256960-49257380 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 254

Conread position: 85-481
Cow position: chr16:10808759-10808368 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 198

Conread position: 85-481
Cow position: chr16:36283004-36282612 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 35

Conread position: 97-475
Cow position: chr16:407436-407817 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 0

Conread position: 97-476
Cow position: chr16:2727693-2728084 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 103

Conread position: 97-489
Cow position: chr16:5483919-5483526 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 97-489
Cow position: chr16:15184399-15184007 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 214

Conread position: 97-489
Cow position: chr16:15492304-15491912 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 323

Conread position: 97-489
Cow position: chr16:15566337-15565954 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 97-489
Cow position: chr16:26663345-26662952 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 269

Conread position: 97-489
Cow position: chr16:28471507-28471891 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 97-489
Cow position: chr16:29046618-29046225 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 97-489
Cow position: chr16:40296582-40296971 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 319

Conread position: 97-489
Cow position: chr16:43897675-43898064 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 94

Conread position: 98-489
Cow position: chr16:14666233-14666626 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 100-489
Cow position: chr16:836623-836233 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 327

Conread position: 106-489
Cow position: chr16:2411383-2411767 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 0

Conread position: 108-481
Cow position: chr16:1567870-1568243 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 108-489
Cow position: chr16:2483558-2483935 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 308

Conread position: 110-481
Cow position: chr16:39821211-39820847 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 121-480
Cow position: chr16:25441195-25440830 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 121-481
Cow position: chr16:12538354-12538712 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 121-481
Cow position: chr16:20254740-20255098 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 0

Conread position: 121-482
Cow position: chr16:6548953-6549312 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 0

Conread position: 121-487
Cow position: chr16:25085192-25084827 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 0

Conread position: 121-489
Cow position: chr16:8816533-8816901 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-489
Cow position: chr16:23252936-23253301 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 0

Conread position: 121-489
Cow position: chr16:25341536-25341172 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 0

Conread position: 121-489
Cow position: chr16:25457894-25458268 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 122-481
Cow position: chr16:6943202-6942835 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 123-243
Cow position: chr16:29675810-29675930 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 123-376
Cow position: chr16:41757879-41758131 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 137, 0

Conread position: 124-446
Cow position: chr16:44966734-44966423 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 226
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 267, 76

Conread position: 126-479
Cow position: chr16:28170797-28171146 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 0

Conread position: 126-481
Cow position: chr16:25188208-25187854 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 138-481
Cow position: chr16:5919037-5918697 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 0

Conread position: 153-489
Cow position: chr16:10437782-10437446 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 153-489
Cow position: chr16:27734263-27734600 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 0

Conread position: 288-481
Cow position: chr16:32606233-32606040 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 296-481
Cow position: chr16:1430619-1430437 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 67-414
Cow position: chr17:15371251-15370904 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 113

Conread position: 67-489
Cow position: chr17:14325310-14325715 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 26

Conread position: 97-481
Cow position: chr17:6260017-6259634 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 97-489
Cow position: chr17:14894327-14893942 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 209

Conread position: 98-489
Cow position: chr17:152302-152692 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 132

Conread position: 98-489
Cow position: chr17:13929842-13929449 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 99-481
Cow position: chr17:16890295-16889912 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 42

Conread position: 100-419
Cow position: chr17:31199494-31199792 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 227
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 304, 74

Conread position: 100-481
Cow position: chr17:1947141-1946767 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 101

Conread position: 106-292
Cow position: chr17:22557786-22557600 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 98, 121

Conread position: 106-349
Cow position: chr17:3709047-3709283 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 122, 0

Conread position: 108-489
Cow position: chr17:11087562-11087943 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 108-489
Cow position: chr17:18103522-18103899 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 74

Conread position: 110-481
Cow position: chr17:18026598-18026968 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 353, 9

Conread position: 110-481
Cow position: chr17:23856873-23857247 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 110-489
Cow position: chr17:13856611-13856988 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 113-481
Cow position: chr17:9653304-9653667 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 113-489
Cow position: chr17:25737820-25737444 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 116-481
Cow position: chr17:6089006-6089372 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 117-376
Cow position: chr17:18324845-18325099 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 154, 69

Conread position: 121-481
Cow position: chr17:1382665-1383025 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr17:24634103-24633743 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr17:27345947-27345594 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 73

Conread position: 121-489
Cow position: chr17:3642687-3643055 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-489
Cow position: chr17:4060248-4059884 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 121-489
Cow position: chr17:14216873-14217243 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 122-481
Cow position: chr17:15143219-15143580 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 0

Conread position: 122-489
Cow position: chr17:6001870-6002228 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 123-481
Cow position: chr17:2287533-2287177 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 0

Conread position: 123-481
Cow position: chr17:35592361-35592004 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 301

Conread position: 126-478
Cow position: chr17:2262246-2261901 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 38

Conread position: 126-478
Cow position: chr17:20087603-20087939 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 126-481
Cow position: chr17:8209250-8208896 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 126-481
Cow position: chr17:20665582-20665937 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr17:43988677-43988324 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 168

Conread position: 126-489
Cow position: chr17:1880238-1879873 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 183

Conread position: 130-481
Cow position: chr17:15435931-15435580 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 131-481
Cow position: chr17:20183095-20183440 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 148-481
Cow position: chr17:16859446-16859767 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 150-489
Cow position: chr17:2556242-2555904 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 209-481
Cow position: chr17:24781109-24780837 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 245-481
Cow position: chr17:22160941-22160705 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 291-486
Cow position: chr17:15322788-15322596 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 193, 124

Conread position: 51-489
Cow position: chr18:37599115-37599540 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 81

Conread position: 67-484
Cow position: chr18:29237220-29236806 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 17

Conread position: 67-489
Cow position: chr18:54171452-54171856 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 135

Conread position: 97-472
Cow position: chr18:27837935-27838309 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 96

Conread position: 97-489
Cow position: chr18:14416357-14415965 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 103

Conread position: 97-489
Cow position: chr18:36508714-36508322 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 268

Conread position: 97-489
Cow position: chr18:40478764-40478376 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 97-489
Cow position: chr18:41840443-41840836 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 99-479
Cow position: chr18:16534359-16533978 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 339

Conread position: 99-489
Cow position: chr18:23798027-23797636 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 100-376
Cow position: chr18:46877630-46877906 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 24, 178

Conread position: 100-379
Cow position: chr18:46868811-46869079 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 184
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 20, 33

Conread position: 100-481
Cow position: chr18:51258362-51257974 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 103-489
Cow position: chr18:2886646-2887032 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 155

Conread position: 110-480
Cow position: chr18:6868890-6869259 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 312

Conread position: 113-481
Cow position: chr18:2019322-2019689 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 45

Conread position: 116-481
Cow position: chr18:33953213-33953571 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 117-479
Cow position: chr18:48222239-48221876 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 101

Conread position: 117-481
Cow position: chr18:53786198-53785834 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 51

Conread position: 121-455
Cow position: chr18:19539228-19539557 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 121-481
Cow position: chr18:22602844-22602484 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr18:37505420-37505060 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 80

Conread position: 121-481
Cow position: chr18:47719227-47719587 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 270

Conread position: 121-481
Cow position: chr18:51689981-51689623 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 0

Conread position: 121-481
Cow position: chr18:54044366-54044706 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 122-486
Cow position: chr18:5980785-5980435 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 247
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 93, 0

Conread position: 126-460
Cow position: chr18:51462727-51463057 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 97

Conread position: 126-466
Cow position: chr18:24040380-24040721 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 126-480
Cow position: chr18:55088573-55088927 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr18:11274754-11275109 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr18:19352734-19352382 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 126-481
Cow position: chr18:33359217-33358864 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 0

Conread position: 126-481
Cow position: chr18:43146574-43146929 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr18:47742370-47742015 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr18:51342038-51341683 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 127-480
Cow position: chr18:51481191-51480836 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 131-489
Cow position: chr18:28973556-28973914 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 140-489
Cow position: chr18:14130722-14130378 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 0

Conread position: 196-489
Cow position: chr18:54024078-54024370 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 0

Conread position: 227-489
Cow position: chr18:43201305-43201046 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 184

Conread position: 263-489
Cow position: chr18:16659803-16660016 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 320-481
Cow position: chr18:44621917-44621756 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 67-259
Cow position: chr19:43101-42908 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 29, 0

Conread position: 70-422
Cow position: chr19:352578-352933 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 9

Conread position: 97-489
Cow position: chr19:4385854-4385474 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 83

Conread position: 97-489
Cow position: chr19:7488698-7488306 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 97-489
Cow position: chr19:28581275-28581663 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 97-489
Cow position: chr19:33941996-33941605 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 154

Conread position: 98-481
Cow position: chr19:172597-172212 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 99-481
Cow position: chr19:893233-893612 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 100-481
Cow position: chr19:32223067-32223438 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 33

Conread position: 100-481
Cow position: chr19:39390890-39390518 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 0

Conread position: 100-481
Cow position: chr19:39546995-39546629 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 92

Conread position: 101-489
Cow position: chr19:33873810-33873420 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 321

Conread position: 103-489
Cow position: chr19:32203118-32202740 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 252
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 86, 93

Conread position: 106-489
Cow position: chr19:15954215-15953847 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 264
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 13, 128

Conread position: 108-489
Cow position: chr19:40852064-40852437 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 0

Conread position: 110-330
Cow position: chr19:28376857-28376637 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 9

Conread position: 121-288
Cow position: chr19:341582-341416 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 137
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 154, 0

Conread position: 121-489
Cow position: chr19:204322-203954 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr19:7342424-7342069 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr19:43144072-43143717 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 127-481
Cow position: chr19:170391-170741 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 180

Conread position: 127-489
Cow position: chr19:10671951-10672313 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 140-481
Cow position: chr19:32665867-32665531 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 162-489
Cow position: chr19:39688847-39688522 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 62

Conread position: 165-481
Cow position: chr19:32245001-32244685 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 219-481
Cow position: chr19:31341985-31341707 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 122, 0

Conread position: 235-481
Cow position: chr19:32237440-32237681 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 24, 0

Conread position: 245-479
Cow position: chr19:30372511-30372285 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 57, 0

Conread position: 257-481
Cow position: chr19:34641-34421 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 37, 0

Conread position: 261-489
Cow position: chr19:55078967-55078739 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 320-481
Cow position: chr19:29209721-29209562 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 60-481
Cow position: chr2:74391240-74391673 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 275
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 45, 36

Conread position: 67-393
Cow position: chr2:36053795-36054122 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 35

Conread position: 67-484
Cow position: chr2:15577714-15578131 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 28

Conread position: 67-489
Cow position: chr2:14822359-14821945 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 28

Conread position: 67-489
Cow position: chr2:28747314-28746902 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 277
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 50

Conread position: 68-481
Cow position: chr2:28643278-28643675 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 27

Conread position: 72-480
Cow position: chr2:34565078-34565482 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 23

Conread position: 75-346
Cow position: chr2:28616359-28616627 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 97-481
Cow position: chr2:42671560-42671944 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 168

Conread position: 97-481
Cow position: chr2:50983401-50983784 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 139

Conread position: 97-489
Cow position: chr2:282864-283257 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 97-489
Cow position: chr2:47810840-47810446 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 97-489
Cow position: chr2:52062495-52062102 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 97-489
Cow position: chr2:65938623-65939012 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 0

Conread position: 97-489
Cow position: chr2:81256632-81256253 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 0

Conread position: 99-489
Cow position: chr2:53329571-53329184 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 0

Conread position: 100-320
Cow position: chr2:63977736-63977520 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 121

Conread position: 100-429
Cow position: chr2:50322108-50321776 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 115

Conread position: 100-481
Cow position: chr2:44935261-44935641 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 20

Conread position: 100-489
Cow position: chr2:7902102-7901721 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 141

Conread position: 100-489
Cow position: chr2:39622110-39621729 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 50

Conread position: 104-481
Cow position: chr2:26921517-26921140 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 278

Conread position: 106-489
Cow position: chr2:28793069-28792682 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 186

Conread position: 108-488
Cow position: chr2:19010048-19009670 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 122

Conread position: 110-481
Cow position: chr2:6772359-6772728 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 110-481
Cow position: chr2:82167422-82167052 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 111-489
Cow position: chr2:16900062-16899682 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 113-481
Cow position: chr2:2101659-2102024 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 121-264
Cow position: chr2:41149792-41149652 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 121-459
Cow position: chr2:24922203-24921864 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 121-478
Cow position: chr2:52616275-52615918 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 87

Conread position: 121-480
Cow position: chr2:5870551-5870889 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 121-480
Cow position: chr2:52152060-52152408 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 103

Conread position: 121-481
Cow position: chr2:3324761-3325121 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr2:3837207-3837541 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 249
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 131, 0

Conread position: 121-481
Cow position: chr2:10711633-10711986 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 0

Conread position: 121-481
Cow position: chr2:11968966-11969318 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 303

Conread position: 121-481
Cow position: chr2:44346518-44346159 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 121-481
Cow position: chr2:46946470-46946111 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 121-481
Cow position: chr2:49472050-49471690 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr2:57141883-57142243 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr2:72922028-72922388 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr2:80955833-80956193 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-489
Cow position: chr2:2184453-2184821 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-489
Cow position: chr2:28650428-28650791 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 121-489
Cow position: chr2:50077399-50077036 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 147

Conread position: 122-416
Cow position: chr2:20874378-20874665 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 195
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 22

Conread position: 122-488
Cow position: chr2:175724-176092 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 124-481
Cow position: chr2:28621028-28621378 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 126-481
Cow position: chr2:212423-212775 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 48

Conread position: 126-481
Cow position: chr2:2412998-2413353 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr2:9907711-9907356 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr2:25030678-25031032 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 126-481
Cow position: chr2:41656880-41656526 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 126-481
Cow position: chr2:44091099-44090743 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 126-481
Cow position: chr2:47038616-47038969 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 126-481
Cow position: chr2:51990732-51991087 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr2:59413882-59414236 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 0

Conread position: 126-482
Cow position: chr2:5813587-5813959 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 326

Conread position: 127-481
Cow position: chr2:10843553-10843895 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 0

Conread position: 127-489
Cow position: chr2:10268862-10269225 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 130-481
Cow position: chr2:4404554-4404904 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 140-481
Cow position: chr2:36980159-36979819 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 0

Conread position: 165-481
Cow position: chr2:85356019-85356326 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 172-482
Cow position: chr2:10729806-10730116 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 16

Conread position: 209-481
Cow position: chr2:24145985-24145719 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 278-481
Cow position: chr2:975631-975834 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 149, 38

Conread position: 317-481
Cow position: chr2:41149650-41149487 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 78, 107

Conread position: 68-481
Cow position: chr20:18315242-18315626 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 296
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 106, 16

Conread position: 97-481
Cow position: chr20:5535280-5534897 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 212

Conread position: 97-481
Cow position: chr20:15292353-15291972 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 322

Conread position: 97-489
Cow position: chr20:8003883-8004275 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 212

Conread position: 97-489
Cow position: chr20:12438418-12438811 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 97-489
Cow position: chr20:13763247-13762852 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 97-489
Cow position: chr20:15097534-15097928 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 97-489
Cow position: chr20:25850649-25851040 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 0

Conread position: 97-489
Cow position: chr20:28161113-28160730 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 154

Conread position: 97-489
Cow position: chr20:28565253-28565646 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 97-489
Cow position: chr20:30684663-30684285 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 134

Conread position: 98-489
Cow position: chr20:23799228-23798832 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 78

Conread position: 99-489
Cow position: chr20:3271045-3270654 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 117

Conread position: 108-481
Cow position: chr20:7116139-7116511 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 113-481
Cow position: chr20:8313114-8313478 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 246

Conread position: 116-481
Cow position: chr20:5560391-5560757 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 119-481
Cow position: chr20:25961423-25961061 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-369
Cow position: chr20:35104312-35104562 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 159, 0

Conread position: 121-478
Cow position: chr20:3684170-3684524 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 0

Conread position: 121-489
Cow position: chr20:27869515-27869147 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-489
Cow position: chr20:35119887-35119523 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 37

Conread position: 122-414
Cow position: chr20:37579742-37579463 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 198
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 155, 67

Conread position: 123-481
Cow position: chr20:15947064-15947435 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 122

Conread position: 126-456
Cow position: chr20:19438253-19437932 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 126-481
Cow position: chr20:3033374-3033020 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 349, 0

Conread position: 126-488
Cow position: chr20:23469353-23469708 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 126-489
Cow position: chr20:823080-822717 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 127-489
Cow position: chr20:29948811-29948449 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 140-489
Cow position: chr20:21914626-21914276 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 54

Conread position: 247-481
Cow position: chr20:11678918-11679152 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 342-484
Cow position: chr20:4799554-4799696 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 67-305
Cow position: chr21:359521-359287 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 67-480
Cow position: chr21:23812364-23811954 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 67-481
Cow position: chr21:2540922-2541336 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 26

Conread position: 67-489
Cow position: chr21:9892093-9891663 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 95

Conread position: 69-282
Cow position: chr21:9870231-9870022 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 24, 0

Conread position: 69-481
Cow position: chr21:4183999-4183601 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 349, 28

Conread position: 72-409
Cow position: chr21:23861265-23860940 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 237
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 33, 118

Conread position: 97-481
Cow position: chr21:10850539-10850157 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 41

Conread position: 97-486
Cow position: chr21:4457288-4456899 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 336

Conread position: 97-488
Cow position: chr21:2883287-2883678 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 57

Conread position: 97-488
Cow position: chr21:30599464-30599850 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 185

Conread position: 97-489
Cow position: chr21:3779227-3778835 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 97-489
Cow position: chr21:10567130-10566743 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 130

Conread position: 97-489
Cow position: chr21:30562264-30561871 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 97-489
Cow position: chr21:31559194-31559585 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 195

Conread position: 97-489
Cow position: chr21:48116562-48116178 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 0

Conread position: 99-421
Cow position: chr21:4087261-4086939 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 224
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 70, 59

Conread position: 101-481
Cow position: chr21:8677903-8678283 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 115-489
Cow position: chr21:4589551-4589923 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 17

Conread position: 119-481
Cow position: chr21:2788554-2788914 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 99

Conread position: 121-476
Cow position: chr21:2476104-2476445 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 121-481
Cow position: chr21:4091086-4090726 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr21:11453219-11453579 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr21:34293452-34293094 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 121-481
Cow position: chr21:46916025-46915664 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 0

Conread position: 121-482
Cow position: chr21:35596803-35596444 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 121-489
Cow position: chr21:146359-145988 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 114

Conread position: 121-489
Cow position: chr21:27282822-27282456 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 169

Conread position: 121-489
Cow position: chr21:40271239-40271608 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 126-481
Cow position: chr21:6339998-6339643 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr21:11506028-11505664 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 126-481
Cow position: chr21:39425495-39425140 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 268

Conread position: 126-489
Cow position: chr21:12055569-12055931 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 0

Conread position: 126-489
Cow position: chr21:26638033-26638396 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 127-480
Cow position: chr21:2416650-2416313 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 49

Conread position: 137-481
Cow position: chr21:37045331-37044990 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 0

Conread position: 179-481
Cow position: chr21:3426864-3426562 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 294-481
Cow position: chr21:33251656-33251469 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 301-481
Cow position: chr21:2716425-2716606 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 317-481
Cow position: chr21:3615534-3615369 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 322-489
Cow position: chr21:26818785-26818952 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 67-340
Cow position: chr22:23853648-23853377 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 201
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 59, 43

Conread position: 71-481
Cow position: chr22:13917817-13917407 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 24

Conread position: 76-446
Cow position: chr22:41419385-41419755 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 19

Conread position: 94-489
Cow position: chr22:44934272-44933876 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 294

Conread position: 97-420
Cow position: chr22:36580897-36581209 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 212
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 297, 91

Conread position: 97-488
Cow position: chr22:39469234-39469622 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 97-489
Cow position: chr22:560416-560809 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 168

Conread position: 97-489
Cow position: chr22:19143410-19143803 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 97-489
Cow position: chr22:21589613-21589223 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 303

Conread position: 97-489
Cow position: chr22:36861241-36861634 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 98-489
Cow position: chr22:1048689-1048307 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 261
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 15, 89

Conread position: 99-481
Cow position: chr22:17328452-17328835 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 100-481
Cow position: chr22:1321872-1321516 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 100-481
Cow position: chr22:11031245-11030864 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 100-489
Cow position: chr22:44352680-44353060 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 102-481
Cow position: chr22:15851605-15851239 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 9

Conread position: 106-371
Cow position: chr22:44475513-44475258 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 80, 0

Conread position: 113-481
Cow position: chr22:10546917-10546549 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 113-487
Cow position: chr22:18816114-18816483 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 117-481
Cow position: chr22:1319665-1319301 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-479
Cow position: chr22:36737023-36736669 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 191

Conread position: 121-479
Cow position: chr22:46547400-46547758 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr22:5673001-5672641 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr22:36533477-36533835 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 267

Conread position: 121-481
Cow position: chr22:39881912-39882272 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr22:44490151-44489791 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr22:46853606-46853246 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 125

Conread position: 121-484
Cow position: chr22:157642-158001 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 213

Conread position: 121-489
Cow position: chr22:31313603-31313237 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 121-489
Cow position: chr22:31334774-31335137 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 121-489
Cow position: chr22:34168595-34168228 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 121-489
Cow position: chr22:42991436-42991068 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 122-489
Cow position: chr22:292907-293261 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 249
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 47, 36

Conread position: 122-489
Cow position: chr22:32347727-32348084 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 255
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 272, 104

Conread position: 125-433
Cow position: chr22:310037-309733 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 71, 0

Conread position: 126-479
Cow position: chr22:35672097-35672449 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 126-481
Cow position: chr22:537360-537005 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr22:1879052-1878696 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 126-481
Cow position: chr22:3278097-3278449 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 126-481
Cow position: chr22:6020921-6020566 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr22:20240583-20240937 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 126-481
Cow position: chr22:27309514-27309869 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-483
Cow position: chr22:27284290-27283946 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 0

Conread position: 126-489
Cow position: chr22:326911-327260 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 127-225
Cow position: chr22:13773153-13773056 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 127-481
Cow position: chr22:15313693-15314046 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 271

Conread position: 127-489
Cow position: chr22:10909574-10909942 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 202

Conread position: 130-489
Cow position: chr22:37131888-37131544 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 134-481
Cow position: chr22:5233054-5233401 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 140-481
Cow position: chr22:36184001-36183663 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 154-457
Cow position: chr22:44396681-44396379 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 171-481
Cow position: chr22:32485139-32485448 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 209-481
Cow position: chr22:24950006-24949734 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 240-489
Cow position: chr22:27386286-27386535 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 275-481
Cow position: chr22:37265565-37265358 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 9, 0

Conread position: 284-482
Cow position: chr22:1293395-1293593 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 135, 117

Conread position: 306-481
Cow position: chr22:13773053-13772882 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 96-481
Cow position: chr23:11778778-11778376 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 252

Conread position: 97-319
Cow position: chr23:3863235-3863013 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 193

Conread position: 97-483
Cow position: chr23:19332121-19332501 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 103

Conread position: 97-489
Cow position: chr23:3881416-3881802 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 268

Conread position: 97-489
Cow position: chr23:4640335-4640728 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 267

Conread position: 97-489
Cow position: chr23:27399792-27399400 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 110

Conread position: 97-489
Cow position: chr23:30636012-30636405 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 204

Conread position: 98-489
Cow position: chr23:19489830-19489434 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 100-480
Cow position: chr23:2795281-2795660 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 61

Conread position: 100-481
Cow position: chr23:5778803-5779182 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 100-481
Cow position: chr23:15177358-15176979 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 76

Conread position: 100-481
Cow position: chr23:16616559-16616945 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 100-481
Cow position: chr23:20302495-20302119 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 100-489
Cow position: chr23:1327189-1327564 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 16

Conread position: 111-489
Cow position: chr23:2757868-2757490 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-466
Cow position: chr23:2716652-2716309 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 0

Conread position: 121-476
Cow position: chr23:15219627-15219979 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 295

Conread position: 121-480
Cow position: chr23:22146990-22147345 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 121-481
Cow position: chr23:31447079-31446719 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-489
Cow position: chr23:967086-967449 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 121-489
Cow position: chr23:36031108-36031477 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 122-488
Cow position: chr23:4888937-4888578 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 154

Conread position: 126-481
Cow position: chr23:2312981-2313333 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 126-481
Cow position: chr23:4360089-4359734 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr23:19950324-19950679 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 140-489
Cow position: chr23:15525855-15525506 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 162-480
Cow position: chr23:2523974-2524292 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 166-482
Cow position: chr23:5874563-5874871 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 177-481
Cow position: chr23:3013854-3013550 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 184-487
Cow position: chr23:1024863-1025164 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 22

Conread position: 209-489
Cow position: chr23:4816251-4815969 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 67-451
Cow position: chr24:17303213-17303588 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 253
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 211, 42

Conread position: 67-481
Cow position: chr24:12797365-12797774 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 67-481
Cow position: chr24:36559683-36560093 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 28

Conread position: 98-481
Cow position: chr24:35841248-35841627 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 147

Conread position: 100-489
Cow position: chr24:12568595-12568229 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 252
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 283, 75

Conread position: 103-288
Cow position: chr24:16376888-16376708 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 107, 87

Conread position: 103-481
Cow position: chr24:12237419-12237044 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 108-481
Cow position: chr24:14384252-14384623 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 174

Conread position: 110-481
Cow position: chr24:35838260-35838635 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 9

Conread position: 110-487
Cow position: chr24:6145729-6145344 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 167

Conread position: 110-489
Cow position: chr24:37217359-37216986 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 33

Conread position: 121-481
Cow position: chr24:6434590-6434231 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 0

Conread position: 121-481
Cow position: chr24:8030501-8030141 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr24:12484967-12485327 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr24:40549224-40548868 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 0

Conread position: 121-489
Cow position: chr24:6660249-6660626 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 253

Conread position: 121-489
Cow position: chr24:12086548-12086180 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 278

Conread position: 121-489
Cow position: chr24:19833735-19833363 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 0

Conread position: 126-480
Cow position: chr24:13188518-13188176 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 103

Conread position: 126-481
Cow position: chr24:6024753-6025105 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 126-481
Cow position: chr24:6084362-6084007 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr24:9188387-9188741 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 126-481
Cow position: chr24:16084314-16084670 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 126-481
Cow position: chr24:22793517-22793164 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 0

Conread position: 126-481
Cow position: chr24:33738995-33739354 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 104

Conread position: 144-489
Cow position: chr24:4415202-4415543 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 151

Conread position: 146-481
Cow position: chr24:44017871-44017536 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 180-489
Cow position: chr24:22952427-22952118 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 211-489
Cow position: chr24:12162134-12161861 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 202
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 0

Conread position: 218-489
Cow position: chr24:12131233-12131506 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 0

Conread position: 307-481
Cow position: chr24:7061264-7061090 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 312-481
Cow position: chr24:2636276-2636110 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 314-481
Cow position: chr24:6645570-6645403 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 67-489
Cow position: chr25:18093370-18092957 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 28

Conread position: 97-481
Cow position: chr25:22147826-22147441 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 97-489
Cow position: chr25:12942369-12942762 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 97-489
Cow position: chr25:18889684-18890076 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 257

Conread position: 97-489
Cow position: chr25:26279590-26279204 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 269

Conread position: 108-481
Cow position: chr25:34656127-34656498 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 0

Conread position: 113-481
Cow position: chr25:11375033-11375401 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 266

Conread position: 121-355
Cow position: chr25:19288040-19288266 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 95, 0

Conread position: 121-481
Cow position: chr25:13781336-13780976 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-484
Cow position: chr25:18060296-18060643 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 121-489
Cow position: chr25:8675222-8674854 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-489
Cow position: chr25:17468396-17468757 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 32

Conread position: 121-489
Cow position: chr25:35362123-35362484 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 0

Conread position: 126-481
Cow position: chr25:17589253-17589602 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 168

Conread position: 126-481
Cow position: chr25:27022265-27022620 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr25:32580266-32579912 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 126-489
Cow position: chr25:19917385-19917022 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 141-481
Cow position: chr25:25506935-25506597 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 13

Conread position: 97-489
Cow position: chr26:17396579-17396970 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 357

Conread position: 97-489
Cow position: chr26:19351162-19351555 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 100-484
Cow position: chr26:4604838-4605219 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 97

Conread position: 109-489
Cow position: chr26:3692131-3691766 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 43

Conread position: 119-479
Cow position: chr26:5675488-5675128 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr26:11253729-11254089 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr26:12574082-12574429 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 121-481
Cow position: chr26:12588238-12588597 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 70

Conread position: 122-427
Cow position: chr26:8282737-8283041 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 68

Conread position: 122-489
Cow position: chr26:9563031-9563398 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 173

Conread position: 126-456
Cow position: chr26:18852541-18852212 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 126-481
Cow position: chr26:2198948-2198595 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 0

Conread position: 126-481
Cow position: chr26:2352038-2352391 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 126-481
Cow position: chr26:3030507-3030862 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr26:8919172-8918818 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 0

Conread position: 126-481
Cow position: chr26:15144438-15144793 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 238

Conread position: 126-481
Cow position: chr26:18855410-18855056 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 126-484
Cow position: chr26:30783065-30782707 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-489
Cow position: chr26:8870204-8869837 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 354

Conread position: 131-489
Cow position: chr26:30589055-30589416 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 68

Conread position: 67-415
Cow position: chr27:26555687-26556033 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 25

Conread position: 97-481
Cow position: chr27:893496-893114 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 315

Conread position: 102-489
Cow position: chr27:25804613-25804987 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 9

Conread position: 110-489
Cow position: chr27:9992926-9993309 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 111-448
Cow position: chr27:15638086-15638418 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 116-481
Cow position: chr27:15541599-15541233 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 121-481
Cow position: chr27:25002271-25002626 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 270

Conread position: 121-481
Cow position: chr27:27051948-27051586 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 203

Conread position: 121-489
Cow position: chr27:14460192-14460560 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-480
Cow position: chr27:27752937-27753291 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr27:16034135-16034488 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 0

Conread position: 126-489
Cow position: chr27:1209610-1209248 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 140-489
Cow position: chr27:26325060-26324711 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 283

Conread position: 168-474
Cow position: chr27:2364968-2364661 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 283-489
Cow position: chr27:23335264-23335058 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 65-380
Cow position: chr28:18180785-18181100 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 214
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 16, 130

Conread position: 67-489
Cow position: chr28:21359364-21358949 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 28

Conread position: 71-489
Cow position: chr28:10618761-10619169 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 13

Conread position: 78-231
Cow position: chr28:11357361-11357515 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 97-448
Cow position: chr28:1167548-1167900 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 265

Conread position: 97-448
Cow position: chr28:5751372-5751725 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 97-448
Cow position: chr28:34594312-34593960 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 97-481
Cow position: chr28:32792047-32792431 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 108

Conread position: 97-488
Cow position: chr28:15377659-15378050 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 151

Conread position: 97-489
Cow position: chr28:1814534-1814927 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 97-489
Cow position: chr28:2083927-2083543 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 22

Conread position: 97-489
Cow position: chr28:7740814-7740430 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 96

Conread position: 97-489
Cow position: chr28:12150636-12150251 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 97-489
Cow position: chr28:13460303-13459910 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 97-489
Cow position: chr28:14705338-14705731 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 146

Conread position: 97-489
Cow position: chr28:22260818-22261210 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 43

Conread position: 104-481
Cow position: chr28:2724567-2724942 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 110-489
Cow position: chr28:7002311-7001929 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 121-481
Cow position: chr28:4380536-4380890 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 0

Conread position: 121-481
Cow position: chr28:8378877-8378513 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 0

Conread position: 121-481
Cow position: chr28:9954441-9954085 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 0

Conread position: 121-481
Cow position: chr28:13440568-13440928 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-489
Cow position: chr28:3192483-3192850 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 0

Conread position: 121-489
Cow position: chr28:12409917-12410281 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 121-489
Cow position: chr28:17388790-17388422 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 124-400
Cow position: chr28:2845869-2846143 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 197
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 169, 0

Conread position: 126-481
Cow position: chr28:1953433-1953079 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 294

Conread position: 126-481
Cow position: chr28:7822561-7822206 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr28:14750850-14750497 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 126-481
Cow position: chr28:24587738-24587382 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 0

Conread position: 127-484
Cow position: chr28:9136749-9137105 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 127-489
Cow position: chr28:18520156-18520520 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 270

Conread position: 140-489
Cow position: chr28:10581696-10582045 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 209

Conread position: 146-489
Cow position: chr28:1505135-1504792 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 153-489
Cow position: chr28:17667237-17667573 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 247-489
Cow position: chr28:26426099-26426333 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 22, 0

Conread position: 327-489
Cow position: chr28:22233589-22233748 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 67-310
Cow position: chr29:24708921-24709163 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 143, 207

Conread position: 67-468
Cow position: chr29:803023-803424 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 271
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 24, 151

Conread position: 97-481
Cow position: chr29:2690199-2689816 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 113

Conread position: 97-481
Cow position: chr29:45460015-45459630 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 97-488
Cow position: chr29:16022829-16022437 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 97-489
Cow position: chr29:2100144-2099751 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 97-489
Cow position: chr29:6266202-6266587 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 287

Conread position: 97-489
Cow position: chr29:10647952-10648345 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 40

Conread position: 97-489
Cow position: chr29:14586221-14585834 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 228

Conread position: 97-489
Cow position: chr29:19622948-19623340 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 375

Conread position: 97-489
Cow position: chr29:39079412-39079799 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 298

Conread position: 97-489
Cow position: chr29:43322853-43322466 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 100-256
Cow position: chr29:5982912-5983070 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 100-456
Cow position: chr29:23976135-23975779 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 100-489
Cow position: chr29:32540106-32539717 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 213

Conread position: 108-487
Cow position: chr29:34799522-34799901 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 11

Conread position: 108-489
Cow position: chr29:40502696-40503072 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 110-489
Cow position: chr29:25932259-25932638 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 119-489
Cow position: chr29:20251435-20251066 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 121-479
Cow position: chr29:21543095-21543448 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 0

Conread position: 121-481
Cow position: chr29:27040498-27040849 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 121-482
Cow position: chr29:5957878-5957516 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 22

Conread position: 121-489
Cow position: chr29:7430945-7431309 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 121-489
Cow position: chr29:15894576-15894944 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-489
Cow position: chr29:26164548-26164916 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-489
Cow position: chr29:27250068-27250428 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 0

Conread position: 126-481
Cow position: chr29:610343-610698 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr29:16770392-16770043 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 0

Conread position: 126-481
Cow position: chr29:18856675-18857030 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-489
Cow position: chr29:35297143-35296781 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 168

Conread position: 127-481
Cow position: chr29:19885339-19884984 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 127-481
Cow position: chr29:27980650-27981003 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 33

Conread position: 130-481
Cow position: chr29:7841061-7840711 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 0

Conread position: 132-481
Cow position: chr29:10847825-10848194 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 153-481
Cow position: chr29:42650528-42650199 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 160

Conread position: 153-481
Cow position: chr29:42802388-42802059 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 160

Conread position: 195-481
Cow position: chr29:32316241-32315955 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 235-481
Cow position: chr29:16109887-16109643 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 155, 0

Conread position: 240-489
Cow position: chr29:15968996-15969244 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 44, 0

Conread position: 279-481
Cow position: chr29:28060548-28060751 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 181, 0

Conread position: 291-489
Cow position: chr29:21246674-21246476 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 299-484
Cow position: chr29:21426962-21427143 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 307-479
Cow position: chr29:31181212-31181040 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 309-478
Cow position: chr29:5983094-5983264 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 67-421
Cow position: chr3:39326963-39326609 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 17

Conread position: 67-429
Cow position: chr3:45774852-45775205 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 241
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 37, 18

Conread position: 67-481
Cow position: chr3:6685696-6685293 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 87

Conread position: 67-483
Cow position: chr3:52864223-52864641 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 102

Conread position: 67-484
Cow position: chr3:19802895-19802489 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 28

Conread position: 67-489
Cow position: chr3:3980631-3980214 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 17

Conread position: 67-489
Cow position: chr3:48230759-48231170 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 26

Conread position: 67-489
Cow position: chr3:64357922-64358341 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 226

Conread position: 72-489
Cow position: chr3:29595435-29595023 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 238

Conread position: 73-479
Cow position: chr3:3054833-3054433 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 79-224
Cow position: chr3:63241542-63241688 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 97-481
Cow position: chr3:23213845-23214229 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 241

Conread position: 97-481
Cow position: chr3:57484514-57484895 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 97-481
Cow position: chr3:75040953-75041334 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 73

Conread position: 97-488
Cow position: chr3:69933611-69933219 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 97-489
Cow position: chr3:18542191-18542583 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 24

Conread position: 97-489
Cow position: chr3:40823604-40823211 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 269

Conread position: 97-489
Cow position: chr3:48060615-48061006 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 267

Conread position: 97-489
Cow position: chr3:59861583-59861190 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 97-489
Cow position: chr3:66620389-66620003 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 139

Conread position: 97-489
Cow position: chr3:72630286-72629893 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 0

Conread position: 97-489
Cow position: chr3:78027193-78027586 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 99-489
Cow position: chr3:53515828-53515442 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 317

Conread position: 100-292
Cow position: chr3:14632486-14632677 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 155
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 83, 0

Conread position: 100-481
Cow position: chr3:42579756-42580133 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 20

Conread position: 103-489
Cow position: chr3:10239857-10239473 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 103-489
Cow position: chr3:58947665-58947281 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 17

Conread position: 104-481
Cow position: chr3:47081450-47081826 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 106-337
Cow position: chr3:12680218-12680437 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 12, 110

Conread position: 108-480
Cow position: chr3:18811706-18811337 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 42

Conread position: 108-489
Cow position: chr3:64017160-64017541 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 49

Conread position: 110-482
Cow position: chr3:5829427-5829797 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 111-489
Cow position: chr3:21182485-21182860 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 116-481
Cow position: chr3:19878855-19878495 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 0

Conread position: 116-481
Cow position: chr3:64027889-64028253 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 121-479
Cow position: chr3:31354073-31354424 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 0

Conread position: 121-481
Cow position: chr3:206969-207330 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 314

Conread position: 121-481
Cow position: chr3:472724-472364 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr3:9717002-9716646 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 121-481
Cow position: chr3:24314661-24314311 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 244

Conread position: 121-481
Cow position: chr3:36117855-36117508 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 121-481
Cow position: chr3:66119847-66119487 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr3:66638932-66638572 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr3:77474954-77474592 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 300

Conread position: 121-488
Cow position: chr3:34030707-34031073 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 0

Conread position: 121-489
Cow position: chr3:594768-594403 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 313

Conread position: 121-489
Cow position: chr3:18463397-18463761 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 106

Conread position: 121-489
Cow position: chr3:19756767-19757135 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-489
Cow position: chr3:36881730-36882094 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 0

Conread position: 122-489
Cow position: chr3:54783734-54783365 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 81

Conread position: 123-481
Cow position: chr3:26822319-26822661 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 0

Conread position: 123-489
Cow position: chr3:5995505-5995872 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 243

Conread position: 126-479
Cow position: chr3:56340240-56340593 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-480
Cow position: chr3:64650813-64650465 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 294

Conread position: 126-481
Cow position: chr3:2917648-2917293 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr3:6782571-6782220 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 0

Conread position: 126-481
Cow position: chr3:7168979-7168628 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 126-481
Cow position: chr3:18859601-18859252 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 53

Conread position: 126-481
Cow position: chr3:22336075-22335725 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 0

Conread position: 126-481
Cow position: chr3:42432418-42432063 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr3:45032928-45032574 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 0

Conread position: 126-481
Cow position: chr3:46861116-46861471 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr3:56321502-56321149 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 126-481
Cow position: chr3:66890776-66891129 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 0

Conread position: 126-484
Cow position: chr3:49613790-49614148 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 145-481
Cow position: chr3:70083486-70083813 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 37

Conread position: 146-489
Cow position: chr3:5883706-5883365 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 0

Conread position: 164-481
Cow position: chr3:15988878-15989203 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 166-489
Cow position: chr3:23291256-23291582 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 160

Conread position: 171-480
Cow position: chr3:5047042-5047351 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 191-481
Cow position: chr3:32145970-32146258 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 194-481
Cow position: chr3:17828530-17828817 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 206-486
Cow position: chr3:38866502-38866225 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 209-481
Cow position: chr3:57856841-57856569 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 220-480
Cow position: chr3:46677821-46678081 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 262-481
Cow position: chr3:37969130-37968911 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 285-489
Cow position: chr3:14634084-14634287 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 160
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 114, 0

Conread position: 311-485
Cow position: chr3:63005144-63005320 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 312-481
Cow position: chr3:4285887-4285718 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 67-487
Cow position: chr4:21337956-21338361 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 17

Conread position: 67-488
Cow position: chr4:46664243-46663827 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 28

Conread position: 67-489
Cow position: chr4:8598107-8598519 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 30

Conread position: 67-489
Cow position: chr4:60264517-60264935 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 17

Conread position: 69-384
Cow position: chr4:11385004-11384692 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 10

Conread position: 71-481
Cow position: chr4:968996-969401 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 271
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 53, 17

Conread position: 97-489
Cow position: chr4:355930-355539 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 0

Conread position: 97-489
Cow position: chr4:43319625-43320007 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 124

Conread position: 97-489
Cow position: chr4:48026417-48026027 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 99-481
Cow position: chr4:66178969-66179351 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 100-393
Cow position: chr4:15194071-15193775 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 172, 92

Conread position: 100-489
Cow position: chr4:17926237-17926625 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 354, 0

Conread position: 101-489
Cow position: chr4:16359901-16359512 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 106-489
Cow position: chr4:34184870-34185238 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 90

Conread position: 108-489
Cow position: chr4:57979638-57979260 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 92

Conread position: 109-489
Cow position: chr4:18516906-18516525 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 113-489
Cow position: chr4:13492581-13492205 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 143

Conread position: 121-481
Cow position: chr4:602990-602631 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 0

Conread position: 121-481
Cow position: chr4:6268631-6268991 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 72

Conread position: 121-481
Cow position: chr4:11618847-11618494 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 121-481
Cow position: chr4:13548026-13547665 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 0

Conread position: 121-481
Cow position: chr4:47717610-47717969 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 66

Conread position: 121-489
Cow position: chr4:12241221-12241590 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 0

Conread position: 121-489
Cow position: chr4:36896364-36896003 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 121-489
Cow position: chr4:41331435-41331070 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 295

Conread position: 121-489
Cow position: chr4:45049302-45049669 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 121-489
Cow position: chr4:65223537-65223905 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-478
Cow position: chr4:158507-158155 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr4:1930632-1930986 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 126-481
Cow position: chr4:5880157-5879808 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 0

Conread position: 126-481
Cow position: chr4:16056593-16056241 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 0

Conread position: 126-481
Cow position: chr4:18424533-18424883 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 126-481
Cow position: chr4:27333427-27333081 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 0

Conread position: 127-481
Cow position: chr4:32212159-32211804 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 127-489
Cow position: chr4:43881100-43880738 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 156

Conread position: 127-489
Cow position: chr4:44725075-44724712 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 130-481
Cow position: chr4:47764183-47764533 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 140-488
Cow position: chr4:41119991-41119643 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 140-489
Cow position: chr4:3961569-3961221 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 0

Conread position: 140-489
Cow position: chr4:25599641-25599989 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 0

Conread position: 151-489
Cow position: chr4:528960-528622 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 151-489
Cow position: chr4:29531748-29532085 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 174-489
Cow position: chr4:4906090-4905783 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 0

Conread position: 297-489
Cow position: chr4:31669129-31668943 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 67-280
Cow position: chr5:23228375-23228163 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 17, 30

Conread position: 67-481
Cow position: chr5:49593310-49593724 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 17

Conread position: 97-481
Cow position: chr5:24098765-24098380 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 97-481
Cow position: chr5:57482430-57482815 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 97-489
Cow position: chr5:415607-415999 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 97-489
Cow position: chr5:2914564-2914174 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 78

Conread position: 97-489
Cow position: chr5:4069103-4068713 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 97-489
Cow position: chr5:37732462-37732069 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 97-489
Cow position: chr5:64781902-64782295 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 98-481
Cow position: chr5:41962125-41962507 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 100-481
Cow position: chr5:10776146-10776533 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 100-489
Cow position: chr5:32945988-32945598 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 321

Conread position: 100-489
Cow position: chr5:46738476-46738861 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 103-481
Cow position: chr5:46630332-46630707 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 0

Conread position: 106-484
Cow position: chr5:25000538-25000924 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 114

Conread position: 109-481
Cow position: chr5:39164696-39165066 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 220

Conread position: 110-481
Cow position: chr5:49518761-49518391 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 9

Conread position: 116-481
Cow position: chr5:6588923-6589290 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 116-481
Cow position: chr5:29042608-29042243 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 172

Conread position: 116-481
Cow position: chr5:59482349-59481986 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 117-481
Cow position: chr5:34203030-34202671 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 191

Conread position: 119-481
Cow position: chr5:24577008-24576645 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 0

Conread position: 119-489
Cow position: chr5:32673647-32674019 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 307

Conread position: 121-481
Cow position: chr5:26079127-26079487 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr5:41550835-41551196 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 121-481
Cow position: chr5:44459574-44459214 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr5:48468188-48468545 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 0

Conread position: 121-481
Cow position: chr5:49182360-49182007 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 135

Conread position: 121-481
Cow position: chr5:55628077-55627723 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 121-489
Cow position: chr5:49119190-49119558 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-479
Cow position: chr5:27909186-27909537 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 126-480
Cow position: chr5:31706660-31706308 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 0

Conread position: 126-480
Cow position: chr5:47831027-47831372 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 126-481
Cow position: chr5:2531357-2531002 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr5:4019112-4019467 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr5:32772568-32772213 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr5:45182017-45182378 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 0

Conread position: 126-481
Cow position: chr5:46776166-46775810 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 344

Conread position: 126-481
Cow position: chr5:54932132-54932486 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 0

Conread position: 126-489
Cow position: chr5:59060704-59060344 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 169

Conread position: 127-481
Cow position: chr5:32733167-32733521 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 127-489
Cow position: chr5:2430047-2430409 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 130-481
Cow position: chr5:14380244-14379894 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 140-489
Cow position: chr5:48808643-48808992 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 165-481
Cow position: chr5:61273140-61273450 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 166-489
Cow position: chr5:6158152-6158471 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 43

Conread position: 169-489
Cow position: chr5:1341755-1342070 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 206-481
Cow position: chr5:58819628-58819903 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 214-481
Cow position: chr5:5317759-5318025 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 150

Conread position: 228-481
Cow position: chr5:4088789-4088536 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 235-481
Cow position: chr5:25206763-25207011 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 132, 0

Conread position: 256-489
Cow position: chr5:7273810-7273575 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 10, 0

Conread position: 261-481
Cow position: chr5:18665913-18665693 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 290-481
Cow position: chr5:53715176-53714985 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 296-489
Cow position: chr5:46005460-46005660 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 319-481
Cow position: chr5:10843981-10844143 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 67-481
Cow position: chr6:38232564-38232149 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 232

Conread position: 67-486
Cow position: chr6:7179406-7179821 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 245

Conread position: 96-489
Cow position: chr6:30274920-30275313 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 71

Conread position: 97-481
Cow position: chr6:15280294-15280669 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 97-481
Cow position: chr6:20560854-20561236 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 288

Conread position: 97-489
Cow position: chr6:702208-701820 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 22

Conread position: 97-489
Cow position: chr6:3277693-3278085 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 97-489
Cow position: chr6:8761047-8761435 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 104

Conread position: 97-489
Cow position: chr6:15140922-15141310 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 97-489
Cow position: chr6:34892748-34893144 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 186

Conread position: 101-489
Cow position: chr6:40554334-40554727 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 107

Conread position: 102-481
Cow position: chr6:11277449-11277817 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 106-489
Cow position: chr6:36526294-36525908 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 255

Conread position: 108-488
Cow position: chr6:35876472-35876852 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 110-489
Cow position: chr6:17046299-17045924 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 0

Conread position: 116-472
Cow position: chr6:7866512-7866869 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 121-479
Cow position: chr6:27469480-27469127 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 121-480
Cow position: chr6:27529774-27530129 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 121-481
Cow position: chr6:13944142-13943784 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 264

Conread position: 121-481
Cow position: chr6:19454148-19453796 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 88

Conread position: 121-481
Cow position: chr6:33389075-33388707 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 277

Conread position: 121-487
Cow position: chr6:6566838-6566480 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 0

Conread position: 121-488
Cow position: chr6:65881100-65880733 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-489
Cow position: chr6:25214492-25214124 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 279

Conread position: 121-489
Cow position: chr6:29311724-29311356 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-489
Cow position: chr6:55544094-55544461 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 0

Conread position: 122-487
Cow position: chr6:3889245-3889612 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 126-480
Cow position: chr6:28491286-28491639 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 0

Conread position: 126-480
Cow position: chr6:44150328-44150682 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr6:331241-331595 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 126-481
Cow position: chr6:1405010-1405363 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 0

Conread position: 126-481
Cow position: chr6:1411712-1412065 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 0

Conread position: 126-481
Cow position: chr6:2374928-2374577 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 0

Conread position: 126-481
Cow position: chr6:2554934-2554581 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 0

Conread position: 126-481
Cow position: chr6:16052108-16051760 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 0

Conread position: 126-481
Cow position: chr6:17598051-17598406 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr6:26670630-26670990 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 198

Conread position: 126-481
Cow position: chr6:34127581-34127222 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 0

Conread position: 126-481
Cow position: chr6:43617943-43617590 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 126-481
Cow position: chr6:44029267-44028921 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 126-481
Cow position: chr6:65821898-65822253 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 127-481
Cow position: chr6:13104286-13103931 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 130-481
Cow position: chr6:13277024-13276676 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 211

Conread position: 130-481
Cow position: chr6:58408688-58409039 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 131-489
Cow position: chr6:24239288-24238930 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 134-481
Cow position: chr6:7141267-7141598 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 148-488
Cow position: chr6:5951040-5951370 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 0

Conread position: 153-489
Cow position: chr6:28275183-28274849 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 0

Conread position: 196-481
Cow position: chr6:42927540-42927257 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 172
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 88, 0

Conread position: 198-489
Cow position: chr6:57869847-57870138 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 282-481
Cow position: chr6:68362250-68362446 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 295-489
Cow position: chr6:10641185-10640991 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 104, 179

Conread position: 301-489
Cow position: chr6:50497405-50497593 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 67-295
Cow position: chr7:53991128-53990901 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 12, 0

Conread position: 67-339
Cow position: chr7:49291039-49290765 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 67-467
Cow position: chr7:39107862-39108252 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 10

Conread position: 67-481
Cow position: chr7:21310583-21310172 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 28

Conread position: 69-427
Cow position: chr7:47051059-47050705 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 232

Conread position: 69-489
Cow position: chr7:27539990-27540402 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 70-388
Cow position: chr7:29470494-29470179 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 25

Conread position: 97-481
Cow position: chr7:45948804-45949186 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 102

Conread position: 97-488
Cow position: chr7:21234664-21235055 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 78

Conread position: 97-489
Cow position: chr7:446283-446676 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 97-489
Cow position: chr7:1372304-1372697 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 97-489
Cow position: chr7:13537236-13537628 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 124

Conread position: 97-489
Cow position: chr7:34149446-34149047 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 286

Conread position: 97-489
Cow position: chr7:34486262-34485863 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 330

Conread position: 98-460
Cow position: chr7:68857765-68858126 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 245

Conread position: 99-416
Cow position: chr7:68478786-68478473 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 206
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 115, 0

Conread position: 100-256
Cow position: chr7:54195913-54196069 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 100-452
Cow position: chr7:27126499-27126155 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 234
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 306, 95

Conread position: 100-481
Cow position: chr7:1610867-1611245 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 0

Conread position: 100-484
Cow position: chr7:19048553-19048927 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 244
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 89

Conread position: 100-489
Cow position: chr7:5662719-5662335 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 91

Conread position: 100-489
Cow position: chr7:27786966-27786579 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 55

Conread position: 100-489
Cow position: chr7:35287216-35287605 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 102

Conread position: 101-489
Cow position: chr7:55537575-55537962 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 110-489
Cow position: chr7:33405908-33406287 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 149

Conread position: 110-489
Cow position: chr7:54603187-54602806 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 112-393
Cow position: chr7:68908159-68907881 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 119-455
Cow position: chr7:39792080-39791744 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 119-489
Cow position: chr7:19924502-19924859 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 119-489
Cow position: chr7:58993519-58993154 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 247
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 164, 179

Conread position: 121-390
Cow position: chr7:5183728-5183459 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-480
Cow position: chr7:26894091-26893714 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 121-481
Cow position: chr7:21320479-21320119 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr7:21975424-21975774 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 121-481
Cow position: chr7:23815647-23816007 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr7:35296947-35297308 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 121-481
Cow position: chr7:61559536-61559176 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-488
Cow position: chr7:64241625-64241986 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 310

Conread position: 121-489
Cow position: chr7:8144921-8145285 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 0

Conread position: 121-489
Cow position: chr7:21127340-21127702 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 121-489
Cow position: chr7:21985722-21985354 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-489
Cow position: chr7:68479490-68479122 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 122-387
Cow position: chr7:52804396-52804657 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 159, 64

Conread position: 122-489
Cow position: chr7:39555774-39556140 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 29

Conread position: 125-409
Cow position: chr7:68777837-68778119 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 37

Conread position: 125-427
Cow position: chr7:58377891-58378184 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 223, 0

Conread position: 126-481
Cow position: chr7:3234365-3234720 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr7:3300838-3301191 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 126-481
Cow position: chr7:6642559-6642915 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 0

Conread position: 126-481
Cow position: chr7:6648338-6648692 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 126-481
Cow position: chr7:20528357-20528712 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr7:20556032-20555677 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr7:20799128-20799479 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 127-489
Cow position: chr7:14139283-14139641 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 289

Conread position: 140-481
Cow position: chr7:10431114-10431455 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 140-489
Cow position: chr7:24808163-24808512 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 142-481
Cow position: chr7:1357384-1357718 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 0

Conread position: 148-481
Cow position: chr7:41869650-41869982 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 18

Conread position: 153-479
Cow position: chr7:33878080-33878400 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 182-489
Cow position: chr7:27101852-27102159 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 194-481
Cow position: chr7:26026285-26026002 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 211-481
Cow position: chr7:6489086-6489347 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 174

Conread position: 279-481
Cow position: chr7:47375162-47374960 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 297-481
Cow position: chr7:68435898-68436082 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 108, 89

Conread position: 66-310
Cow position: chr8:16083892-16083649 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 47, 18

Conread position: 67-430
Cow position: chr8:25543066-25542703 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 30

Conread position: 67-478
Cow position: chr8:38606963-38607365 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 64

Conread position: 67-481
Cow position: chr8:45160809-45161214 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 29

Conread position: 67-481
Cow position: chr8:61034796-61035214 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 23

Conread position: 67-489
Cow position: chr8:24419974-24420385 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 0

Conread position: 67-489
Cow position: chr8:44693845-44693435 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 45

Conread position: 69-289
Cow position: chr8:47673033-47672813 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 35, 15

Conread position: 69-484
Cow position: chr8:11056430-11056021 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 278
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 25, 16

Conread position: 71-427
Cow position: chr8:47491271-47491628 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 121

Conread position: 96-481
Cow position: chr8:59262358-59262743 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 97-488
Cow position: chr8:14928458-14928850 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 97-488
Cow position: chr8:44244039-44244431 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 0

Conread position: 97-489
Cow position: chr8:5016716-5016325 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 372

Conread position: 97-489
Cow position: chr8:10743096-10743488 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 97-489
Cow position: chr8:19051011-19050626 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 97-489
Cow position: chr8:25522934-25522541 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 50

Conread position: 97-489
Cow position: chr8:33588909-33588521 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 216

Conread position: 97-489
Cow position: chr8:38390903-38390510 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 97-489
Cow position: chr8:42484447-42484071 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 216

Conread position: 100-481
Cow position: chr8:45448988-45448599 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 106

Conread position: 100-489
Cow position: chr8:3785241-3784852 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 106-487
Cow position: chr8:17311541-17311161 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 10

Conread position: 110-481
Cow position: chr8:24915816-24916187 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 113-489
Cow position: chr8:23771153-23770782 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 0

Conread position: 116-481
Cow position: chr8:8655703-8656065 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 269

Conread position: 121-479
Cow position: chr8:25776163-25776521 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr8:1348725-1349094 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 227

Conread position: 121-481
Cow position: chr8:32931020-32930661 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 0

Conread position: 121-489
Cow position: chr8:3856506-3856872 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 121-489
Cow position: chr8:9275521-9275162 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 121-489
Cow position: chr8:11832210-11831840 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 121-489
Cow position: chr8:36636034-36636399 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 121-489
Cow position: chr8:39195707-39196073 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 121-489
Cow position: chr8:50288641-50289008 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 0

Conread position: 123-481
Cow position: chr8:45189592-45189246 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 0

Conread position: 125-489
Cow position: chr8:21158312-21158675 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 204

Conread position: 126-459
Cow position: chr8:26005091-26005426 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 132

Conread position: 126-481
Cow position: chr8:1153802-1154157 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr8:2886256-2885895 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 258

Conread position: 126-481
Cow position: chr8:6065263-6065618 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr8:9735752-9735397 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr8:10748880-10748527 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 0

Conread position: 126-481
Cow position: chr8:22571790-22572144 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 252

Conread position: 126-481
Cow position: chr8:27578907-27578558 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 0

Conread position: 126-481
Cow position: chr8:32631522-32631875 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 126-489
Cow position: chr8:8518078-8518438 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 127-481
Cow position: chr8:47069300-47069656 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 213

Conread position: 127-489
Cow position: chr8:49214932-49214569 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 131-489
Cow position: chr8:47661825-47662184 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 0

Conread position: 131-489
Cow position: chr8:50994288-50993930 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 134-481
Cow position: chr8:8556651-8556997 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 204

Conread position: 150-481
Cow position: chr8:47885510-47885184 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 153-481
Cow position: chr8:27983319-27983645 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 160-481
Cow position: chr8:61066775-61067089 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 147

Conread position: 162-481
Cow position: chr8:8910690-8910370 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 202

Conread position: 170-481
Cow position: chr8:11801695-11801386 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 249

Conread position: 179-489
Cow position: chr8:46091417-46091719 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 187-489
Cow position: chr8:36637214-36637514 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 194-489
Cow position: chr8:25407882-25407591 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 0

Conread position: 228-489
Cow position: chr8:53427724-53427470 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 0

Conread position: 308-481
Cow position: chr8:29582268-29582092 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 46-489
Cow position: chr9:59482435-59482878 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 319

Conread position: 67-256
Cow position: chr9:3803258-3803069 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 17

Conread position: 67-360
Cow position: chr9:39040786-39040497 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 211
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 17, 90

Conread position: 67-455
Cow position: chr9:13477006-13477379 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 17

Conread position: 67-475
Cow position: chr9:64119035-64118636 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 120

Conread position: 67-477
Cow position: chr9:3355775-3356181 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 336

Conread position: 69-320
Cow position: chr9:20309321-20309568 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 83-484
Cow position: chr9:37129343-37129737 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 113

Conread position: 88-427
Cow position: chr9:64159315-64158971 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 246
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 22, 47

Conread position: 97-481
Cow position: chr9:6050862-6051247 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 97-481
Cow position: chr9:59455412-59455796 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 357

Conread position: 97-489
Cow position: chr9:2171243-2170850 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 34

Conread position: 97-489
Cow position: chr9:4532678-4532289 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 97-489
Cow position: chr9:16175954-16175562 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 210

Conread position: 97-489
Cow position: chr9:31807720-31807328 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 98

Conread position: 97-489
Cow position: chr9:37971024-37971412 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 0

Conread position: 97-489
Cow position: chr9:60277835-60278227 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 180

Conread position: 99-481
Cow position: chr9:3156207-3155835 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 0

Conread position: 99-481
Cow position: chr9:28625856-28626238 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 96

Conread position: 100-325
Cow position: chr9:44818042-44817817 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 100-481
Cow position: chr9:31021006-31020611 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 101-481
Cow position: chr9:9054881-9055263 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 101-489
Cow position: chr9:7061909-7062298 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 106-477
Cow position: chr9:34992569-34992188 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 24

Conread position: 108-489
Cow position: chr9:3542982-3542605 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 0

Conread position: 110-489
Cow position: chr9:30672541-30672163 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 0

Conread position: 111-489
Cow position: chr9:9013280-9012899 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 117-479
Cow position: chr9:10315533-10315173 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 93

Conread position: 121-346
Cow position: chr9:37095357-37095132 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 48, 37

Conread position: 121-481
Cow position: chr9:25484035-25483676 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 121-481
Cow position: chr9:34242435-34242795 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 154

Conread position: 121-481
Cow position: chr9:45873511-45873151 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr9:50789841-50789480 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 179

Conread position: 121-484
Cow position: chr9:37063641-37063995 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 121-489
Cow position: chr9:1995752-1996118 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 121-489
Cow position: chr9:25023139-25023507 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-489
Cow position: chr9:29628585-29628952 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 121-489
Cow position: chr9:42309845-42309477 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-489
Cow position: chr9:59536257-59535892 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 295

Conread position: 122-481
Cow position: chr9:3006084-3006443 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 122-489
Cow position: chr9:59173998-59174362 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 210

Conread position: 123-481
Cow position: chr9:15072674-15072319 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 126-481
Cow position: chr9:780647-781003 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 0

Conread position: 126-481
Cow position: chr9:17064226-17064595 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 0

Conread position: 126-481
Cow position: chr9:25755066-25755421 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr9:27934246-27933897 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 126-481
Cow position: chr9:28678130-28677778 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 0

Conread position: 126-481
Cow position: chr9:30826839-30826484 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr9:31194009-31194364 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-489
Cow position: chr9:1076040-1076404 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 0

Conread position: 127-452
Cow position: chr9:16268528-16268203 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 133-489
Cow position: chr9:3548023-3548378 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 20

Conread position: 135-489
Cow position: chr9:27034849-27034501 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 74

Conread position: 140-481
Cow position: chr9:3566709-3567050 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 260

Conread position: 147-481
Cow position: chr9:792377-792711 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 113

Conread position: 160-489
Cow position: chr9:37162683-37163013 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 0

Conread position: 175-481
Cow position: chr9:1251867-1252165 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 180-489
Cow position: chr9:28021654-28021342 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 185-481
Cow position: chr9:222449-222746 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 213
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 103, 63

Conread position: 190-481
Cow position: chr9:4672700-4672410 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 209-489
Cow position: chr9:29028151-29028434 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 253-479
Cow position: chr9:2200137-2199911 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 306-488
Cow position: chr9:6830580-6830762 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 312-489
Cow position: chr9:7002524-7002347 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 48-481
Cow position: chrX:2143421-2142993 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 6

Conread position: 67-393
Cow position: chrX:28549987-28549659 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 26

Conread position: 67-481
Cow position: chrX:12973108-12973523 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 26

Conread position: 69-405
Cow position: chrX:31725146-31724809 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 14

Conread position: 96-489
Cow position: chrX:32467345-32466952 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 97-480
Cow position: chrX:16699393-16699010 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 97-481
Cow position: chrX:30183801-30184185 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 312

Conread position: 97-489
Cow position: chrX:1547027-1546635 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 97-489
Cow position: chrX:15599022-15598630 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 97-489
Cow position: chrX:18954432-18954822 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 123

Conread position: 97-489
Cow position: chrX:21223021-21222628 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 97-489
Cow position: chrX:23391506-23391901 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 97-489
Cow position: chrX:30711442-30711054 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 102

Conread position: 98-489
Cow position: chrX:30368926-30369301 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 25

Conread position: 99-481
Cow position: chrX:24089487-24089110 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 100-479
Cow position: chrX:29872475-29872849 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 75

Conread position: 100-489
Cow position: chrX:970858-970466 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 100-489
Cow position: chrX:23455489-23455874 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 0

Conread position: 100-489
Cow position: chrX:26767107-26767497 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 306

Conread position: 101-488
Cow position: chrX:15127153-15127540 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 206

Conread position: 102-480
Cow position: chrX:40056980-40057355 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 103-481
Cow position: chrX:30142310-30142680 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 103-489
Cow position: chrX:2536696-2537071 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 110-481
Cow position: chrX:21289411-21289783 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 110-481
Cow position: chrX:21602957-21602596 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 110-481
Cow position: chrX:35017887-35017522 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 9

Conread position: 112-481
Cow position: chrX:24121843-24122209 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 0

Conread position: 113-489
Cow position: chrX:22582623-22583000 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 116-481
Cow position: chrX:16363051-16363416 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 117-481
Cow position: chrX:23019396-23019032 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 62

Conread position: 119-417
Cow position: chrX:40247246-40247542 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 119-489
Cow position: chrX:17478452-17478824 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 0

Conread position: 119-489
Cow position: chrX:26528046-26527676 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-456
Cow position: chrX:31191742-31192069 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 228
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 29, 22

Conread position: 121-481
Cow position: chrX:982706-982346 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chrX:5283667-5284026 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 0

Conread position: 121-481
Cow position: chrX:6909278-6909628 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 125

Conread position: 121-481
Cow position: chrX:7481671-7481311 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chrX:8670659-8670301 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 121-481
Cow position: chrX:9192576-9192936 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chrX:18659715-18660074 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 121-481
Cow position: chrX:20804195-20803834 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 121-481
Cow position: chrX:23047212-23046854 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 121-481
Cow position: chrX:39521975-39521615 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chrX:41410953-41411313 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-489
Cow position: chrX:320535-320169 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 121-489
Cow position: chrX:8454820-8454452 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-489
Cow position: chrX:12669796-12670161 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 313

Conread position: 121-489
Cow position: chrX:21829592-21829224 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 32

Conread position: 121-489
Cow position: chrX:27494778-27494408 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 122-479
Cow position: chrX:9125426-9125069 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 122-489
Cow position: chrX:5323656-5324023 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 123-359
Cow position: chrX:10417891-10418120 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 71, 87

Conread position: 123-481
Cow position: chrX:21632521-21632875 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 0

Conread position: 123-481
Cow position: chrX:26627966-26628324 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-469
Cow position: chrX:28585043-28584700 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-478
Cow position: chrX:22778375-22778023 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-479
Cow position: chrX:37812225-37811872 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chrX:2604111-2603757 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 59

Conread position: 126-481
Cow position: chrX:7030251-7029897 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 126-481
Cow position: chrX:7093661-7093307 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 0

Conread position: 126-481
Cow position: chrX:7751963-7751607 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 0

Conread position: 126-481
Cow position: chrX:8587157-8586802 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chrX:9008401-9008050 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 0

Conread position: 126-481
Cow position: chrX:10531495-10531850 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chrX:11464939-11465293 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 126-481
Cow position: chrX:12654697-12655047 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 126-481
Cow position: chrX:14786809-14787164 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chrX:15179368-15179721 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 0

Conread position: 126-481
Cow position: chrX:16275740-16275385 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 139

Conread position: 126-481
Cow position: chrX:18219460-18219105 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chrX:20315992-20316347 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 209

Conread position: 126-481
Cow position: chrX:22525541-22525896 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chrX:27426257-27426608 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 126-481
Cow position: chrX:29947770-29947415 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chrX:30173608-30173954 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 126-481
Cow position: chrX:31187182-31187527 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 0

Conread position: 126-489
Cow position: chrX:2101922-2101559 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-489
Cow position: chrX:2562794-2563157 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-489
Cow position: chrX:35529925-35529560 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 126-489
Cow position: chrX:37849077-37848714 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 127-481
Cow position: chrX:12803801-12804154 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 292

Conread position: 130-481
Cow position: chrX:13398061-13398408 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 140-489
Cow position: chrX:2482589-2482938 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 143-489
Cow position: chrX:13413071-13413415 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 159-489
Cow position: chrX:29853536-29853863 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 0

Conread position: 165-481
Cow position: chrX:2859777-2860093 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 165-481
Cow position: chrX:5394938-5395255 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 0

Conread position: 165-481
Cow position: chrX:26400445-26400759 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 165-489
Cow position: chrX:32094939-32095262 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 253

Conread position: 182-489
Cow position: chrX:16017136-16017441 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 207
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 61, 18

Conread position: 198-488
Cow position: chrX:21490220-21489932 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 207-481
Cow position: chrX:3084920-3085193 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 210-481
Cow position: chrX:12288957-12289233 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 211-463
Cow position: chrX:5336491-5336742 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 246-481
Cow position: chrX:8479644-8479413 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 171, 0

Conread position: 253-481
Cow position: chrX:21587101-21586875 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 258-481
Cow position: chrX:30666008-30666230 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 132, 0

Conread position: 276-481
Cow position: chrX:22130793-22130994 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 66

Conread position: 311-479
Cow position: chrX:12342071-12341903 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 116
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0