Non-Coding RNA Search

Cow genome map


           Conread name:
           Lym2-sn47_F07.f
        

               Conread position:
               90-218
               

               Cow position:
               chr1:26518389-26518518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               90-327
               

               Cow position:
               chr1:30519185-30518948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               184
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               197, 68
               

               Conread position:
               91-382
               

               Cow position:
               chr1:44100868-44101165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               41, 32
               

               Conread position:
               92-268
               

               Cow position:
               chr1:73070560-73070736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               145
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               69, 158
               

               Conread position:
               93-214
               

               Cow position:
               chr1:5502460-5502338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-240
               

               Cow position:
               chr1:24651774-24651625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-244
               

               Cow position:
               chr1:66999517-66999363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-256
               

               Cow position:
               chr1:34692714-34692557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               93-262
               

               Cow position:
               chr1:31418023-31418191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               65, 51
               

               Conread position:
               93-264
               

               Cow position:
               chr1:93855016-93854845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               68, 148
               

               Conread position:
               93-265
               

               Cow position:
               chr1:17941293-17941465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               93-266
               

               Cow position:
               chr1:68607049-68607221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               51, 26
               

               Conread position:
               93-267
               

               Cow position:
               chr1:48246326-48246165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               93-267
               

               Cow position:
               chr1:82923684-82923859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-268
               

               Cow position:
               chr1:12061722-12061893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               68, 15
               

               Conread position:
               93-268
               

               Cow position:
               chr1:28873569-28873394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               146
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               68, 149
               

               Conread position:
               93-268
               

               Cow position:
               chr1:30534529-30534704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr1:33551419-33551244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               68, 165
               

               Conread position:
               93-268
               

               Cow position:
               chr1:42736946-42736772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               146
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               93-268
               

               Cow position:
               chr1:52358783-52358957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               67, 63
               

               Conread position:
               93-268
               

               Cow position:
               chr1:57366633-57366812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               47, 153
               

               Conread position:
               93-268
               

               Cow position:
               chr1:58336330-58336155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               146
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr1:62244151-62244327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               149
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               68, 138
               

               Conread position:
               93-268
               

               Cow position:
               chr1:65386821-65386648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               65, 119
               

               Conread position:
               93-268
               

               Cow position:
               chr1:69403475-69403300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr1:76545046-76545218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               69, 136
               

               Conread position:
               93-268
               

               Cow position:
               chr1:79456478-79456652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               68, 155
               

               Conread position:
               93-268
               

               Cow position:
               chr1:85882487-85882322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-268
               

               Cow position:
               chr1:91892627-91892803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               146
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               49, 158
               

               Conread position:
               93-268
               

               Cow position:
               chr1:94660167-94660002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               93-268
               

               Cow position:
               chr1:99913912-99913737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               146
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               49, 137
               

               Conread position:
               93-269
               

               Cow position:
               chr1:31365594-31365765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               65, 152
               

               Conread position:
               93-269
               

               Cow position:
               chr1:56143843-56144018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               65, 45
               

               Conread position:
               93-274
               

               Cow position:
               chr1:69921943-69922126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr1:3385527-3385708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               68, 29
               

               Conread position:
               93-275
               

               Cow position:
               chr1:8825544-8825362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr1:25179538-25179718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               148
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               65, 128
               

               Conread position:
               93-275
               

               Cow position:
               chr1:49973696-49973878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               68, 149
               

               Conread position:
               93-275
               

               Cow position:
               chr1:58883573-58883755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               68, 160
               

               Conread position:
               93-275
               

               Cow position:
               chr1:72081272-72081091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               65, 97
               

               Conread position:
               93-275
               

               Cow position:
               chr1:97226216-97226399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-283
               

               Cow position:
               chr1:72981762-72981573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-283
               

               Cow position:
               chr1:85780285-85780474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               153
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               93-284
               

               Cow position:
               chr1:76752158-76752350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               154
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-294
               

               Cow position:
               chr1:18013008-18013209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               69, 134
               

               Conread position:
               93-294
               

               Cow position:
               chr1:63605284-63605484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               162
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               65, 158
               

               Conread position:
               93-324
               

               Cow position:
               chr1:72186385-72186617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-369
               

               Cow position:
               chr1:55321652-55321934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 24
               

               Conread position:
               93-376
               

               Cow position:
               chr1:29609175-29609457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               62, 41
               

               Conread position:
               93-399
               

               Cow position:
               chr1:67287317-67287016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 58
               

               Conread position:
               93-403
               

               Cow position:
               chr1:40512550-40512869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 71
               

               Conread position:
               94-419
               

               Cow position:
               chr1:88269716-88270049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               43, 286
               

               Conread position:
               95-245
               

               Cow position:
               chr1:60339791-60339641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               66, 45
               

               Conread position:
               95-245
               

               Cow position:
               chr1:89426060-89425909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               95-268
               

               Cow position:
               chr1:88131264-88131091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               143
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               66, 155
               

               Conread position:
               96-203
               

               Cow position:
               chr1:91750977-91751085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               96-224
               

               Cow position:
               chr1:59209665-59209794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               96-267
               

               Cow position:
               chr1:29034782-29034616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               65, 105
               

               Conread position:
               96-275
               

               Cow position:
               chr1:33712557-33712376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               65, 7
               

               Conread position:
               96-285
               

               Cow position:
               chr1:21999465-21999655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               157
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 154
               

               Conread position:
               96-394
               

               Cow position:
               chr1:29033609-29033302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               65, 157
               

               Conread position:
               97-267
               

               Cow position:
               chr1:86698727-86698897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               58, 132
               

               Conread position:
               97-286
               

               Cow position:
               chr1:102549727-102549536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               35, 13
               

               Conread position:
               98-218
               

               Cow position:
               chr1:56164033-56163913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               63, 78
               

               Conread position:
               98-243
               

               Cow position:
               chr1:61309495-61309349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr1:5355610-5355449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr1:29362781-29362619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr1:30283059-30283220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr1:31397174-31397013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-264
               

               Cow position:
               chr1:17036075-17036242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               151, 60
               

               Conread position:
               98-265
               

               Cow position:
               chr1:53199033-53198864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr1:9382068-9382233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               63, 40
               

               Conread position:
               98-266
               

               Cow position:
               chr1:20829373-20829204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr1:33851769-33851592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr1:39544254-39544084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr1:40574697-40574528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr1:57424356-57424524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               10, 112
               

               Conread position:
               98-266
               

               Cow position:
               chr1:67834657-67834826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr1:80358697-80358866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr1:82564987-82564818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr1:82912660-82912829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr1:85792166-85792001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               63, 40
               

               Conread position:
               98-267
               

               Cow position:
               chr1:8554811-8554641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               63, 92
               

               Conread position:
               98-267
               

               Cow position:
               chr1:18879909-18880080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-267
               

               Cow position:
               chr1:40053838-40053668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               63, 40
               

               Conread position:
               98-268
               

               Cow position:
               chr1:17012255-17012426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr1:40684213-40684378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               60, 88
               

               Conread position:
               98-268
               

               Cow position:
               chr1:95239853-95239682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-269
               

               Cow position:
               chr1:28711400-28711229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               63, 162
               

               Conread position:
               98-269
               

               Cow position:
               chr1:56490334-56490161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-275
               

               Cow position:
               chr1:79636447-79636622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               13, 33
               

               Conread position:
               98-279
               

               Cow position:
               chr1:71562089-71562270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               63, 163
               

               Conread position:
               101-207
               

               Cow position:
               chr1:18242852-18242959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               101-266
               

               Cow position:
               chr1:21087894-21087728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               101-266
               

               Cow position:
               chr1:56723636-56723469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               101-266
               

               Cow position:
               chr1:91899477-91899311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               101-268
               

               Cow position:
               chr1:102434552-102434719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               60, 149
               

               Conread position:
               102-266
               

               Cow position:
               chr1:11291626-11291791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               102-266
               

               Cow position:
               chr1:69766942-69766777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               102-298
               

               Cow position:
               chr1:89770177-89770378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               56, 149
               

               Conread position:
               103-244
               

               Cow position:
               chr1:13450683-13450543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               58, 18
               

               Conread position:
               104-395
               

               Cow position:
               chr1:78361627-78361336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               25, 11
               

               Conread position:
               105-459
               

               Cow position:
               chr1:21720693-21720347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 46
               

               Conread position:
               108-214
               

               Cow position:
               chr1:76622427-76622534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               110-266
               

               Cow position:
               chr1:82653125-82652968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               113-457
               

               Cow position:
               chr1:67327789-67328132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               23, 5
               

               Conread position:
               114-275
               

               Cow position:
               chr1:1460861-1461020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               83, 6
               

               Conread position:
               114-292
               

               Cow position:
               chr1:45019406-45019580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               44, 20
               

               Conread position:
               118-283
               

               Cow position:
               chr1:18027301-18027463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               43, 19
               

               Conread position:
               122-399
               

               Cow position:
               chr1:22344383-22344116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               203
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               39, 90
               

               Conread position:
               123-270
               

               Cow position:
               chr1:56193467-56193615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               38, 128
               

               Conread position:
               129-423
               

               Cow position:
               chr1:38386895-38387185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               59, 9
               

               Conread position:
               131-374
               

               Cow position:
               chr1:72137459-72137203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               30, 87
               

               Conread position:
               132-266
               

               Cow position:
               chr1:28723330-28723195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               26, 9
               

               Conread position:
               141-266
               

               Cow position:
               chr1:69537345-69537218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               141-271
               

               Cow position:
               chr1:62853407-62853536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               141-276
               

               Cow position:
               chr1:97124255-97124119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               17, 26
               

               Conread position:
               142-449
               

               Cow position:
               chr1:25886316-25886618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               25, 74
               

               Conread position:
               145-268
               

               Cow position:
               chr1:57568396-57568272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               147-275
               

               Cow position:
               chr1:59674892-59674762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               148-266
               

               Cow position:
               chr1:87206987-87207107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               176-387
               

               Cow position:
               chr1:58179293-58179502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               93, 184
               

               Conread position:
               190-423
               

               Cow position:
               chr1:29413751-29413984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               129, 38
               

               Conread position:
               92-265
               

               Cow position:
               chr10:29846130-29846305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               29, 160
               

               Conread position:
               92-299
               

               Cow position:
               chr10:24977247-24977454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               66, 34
               

               Conread position:
               93-204
               

               Cow position:
               chr10:14335329-14335441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-210
               

               Cow position:
               chr10:1377759-1377641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-222
               

               Cow position:
               chr10:37770884-37770754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-233
               

               Cow position:
               chr10:19715053-19715190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               68, 39
               

               Conread position:
               93-259
               

               Cow position:
               chr10:2120495-2120660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               65, 117
               

               Conread position:
               93-266
               

               Cow position:
               chr10:55093778-55093603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               93-266
               

               Cow position:
               chr10:57989475-57989648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr10:8290495-8290322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               147
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               65, 97
               

               Conread position:
               93-268
               

               Cow position:
               chr10:16926049-16925879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               93-268
               

               Cow position:
               chr10:21487434-21487259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               65, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr10:62408332-62408507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-269
               

               Cow position:
               chr10:54978735-54978910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               147
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr10:7281576-7281758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-275
               

               Cow position:
               chr10:30684996-30685177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               148
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               65, 114
               

               Conread position:
               93-283
               

               Cow position:
               chr10:38344842-38345032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               154
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-283
               

               Cow position:
               chr10:38537985-38538175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               153
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-293
               

               Cow position:
               chr10:22101751-22101556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               65, 105
               

               Conread position:
               93-301
               

               Cow position:
               chr10:17432738-17432950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               165
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-363
               

               Cow position:
               chr10:8326778-8327039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               38, 68
               

               Conread position:
               93-385
               

               Cow position:
               chr10:26597131-26596826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               65, 213
               

               Conread position:
               93-387
               

               Cow position:
               chr10:54965603-54965890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               124, 40
               

               Conread position:
               93-394
               

               Cow position:
               chr10:44294401-44294684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-397
               

               Cow position:
               chr10:3542711-3543016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               221
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               152, 65
               

               Conread position:
               93-403
               

               Cow position:
               chr10:15860403-15860696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               226, 59
               

               Conread position:
               93-436
               

               Cow position:
               chr10:41388594-41388938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               65, 150
               

               Conread position:
               93-459
               

               Cow position:
               chr10:31524618-31524263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 182
               

               Conread position:
               96-258
               

               Cow position:
               chr10:21740244-21740406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               65, 5
               

               Conread position:
               96-258
               

               Cow position:
               chr10:28642048-28641885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               96-266
               

               Cow position:
               chr10:41157956-41157785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               96-275
               

               Cow position:
               chr10:19512122-19511942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               31, 104
               

               Conread position:
               96-328
               

               Cow position:
               chr10:39040787-39041017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               62, 77
               

               Conread position:
               96-397
               

               Cow position:
               chr10:38545399-38545691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 62
               

               Conread position:
               97-269
               

               Cow position:
               chr10:10582317-10582146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               64, 51
               

               Conread position:
               98-223
               

               Cow position:
               chr10:47907437-47907311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-224
               

               Cow position:
               chr10:4191731-4191858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr10:51952115-51952276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr10:21400164-21400333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr10:25564754-25564920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr10:39180292-39180121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               63, 86
               

               Conread position:
               98-266
               

               Cow position:
               chr10:41567609-41567440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr10:5849119-5849290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr10:56065180-56065009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               100-215
               

               Cow position:
               chr10:39815982-39816097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               61, 46
               

               Conread position:
               100-258
               

               Cow position:
               chr10:32578792-32578634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               61, 92
               

               Conread position:
               101-245
               

               Cow position:
               chr10:11698747-11698602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               101-266
               

               Cow position:
               chr10:19495782-19495948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               102-266
               

               Cow position:
               chr10:14804336-14804174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               59, 11
               

               Conread position:
               102-386
               

               Cow position:
               chr10:38848222-38847935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 234
               

               Conread position:
               102-386
               

               Cow position:
               chr10:41774728-41775018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               55, 36
               

               Conread position:
               103-266
               

               Cow position:
               chr10:41877419-41877256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               58, 92
               

               Conread position:
               104-276
               

               Cow position:
               chr10:42751483-42751305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               92, 54
               

               Conread position:
               105-399
               

               Cow position:
               chr10:14861765-14861461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 148
               

               Conread position:
               110-245
               

               Cow position:
               chr10:280132-280264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               51, 16
               

               Conread position:
               121-397
               

               Cow position:
               chr10:28930902-28931184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 17
               

               Conread position:
               127-369
               

               Cow position:
               chr10:20370750-20370982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               128, 31
               

               Conread position:
               129-341
               

               Cow position:
               chr10:42749251-42749032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               160, 127
               

               Conread position:
               129-342
               

               Cow position:
               chr10:42110814-42110599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               160, 16
               

               Conread position:
               129-437
               

               Cow position:
               chr10:32065068-32064743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               14, 261
               

               Conread position:
               130-268
               

               Cow position:
               chr10:25359882-25359743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               10, 121
               

               Conread position:
               131-292
               

               Cow position:
               chr10:8339877-8339716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               30, 51
               

               Conread position:
               132-384
               

               Cow position:
               chr10:4717408-4717161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               29, 16
               

               Conread position:
               133-275
               

               Cow position:
               chr10:124789-124646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               134-268
               

               Cow position:
               chr10:32651210-32651077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               27, 40
               

               Conread position:
               141-259
               

               Cow position:
               chr10:34686370-34686249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               141-275
               

               Cow position:
               chr10:62217078-62216943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 7
               

               Conread position:
               141-285
               

               Cow position:
               chr10:62778819-62778674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 5
               

               Conread position:
               148-269
               

               Cow position:
               chr10:46693929-46694052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               209-403
               

               Cow position:
               chr10:42629356-42629153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               249-398
               

               Cow position:
               chr10:33347384-33347228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               71, 21
               

               Conread position:
               90-267
               

               Cow position:
               chr11:46246407-46246580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               14, 9
               

               Conread position:
               92-384
               

               Cow position:
               chr11:21474411-21474116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               63, 46
               

               Conread position:
               93-193
               

               Cow position:
               chr11:71329745-71329645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               65, 91
               

               Conread position:
               93-210
               

               Cow position:
               chr11:40775845-40775962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               68, 8
               

               Conread position:
               93-257
               

               Cow position:
               chr11:8245465-8245300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-267
               

               Cow position:
               chr11:4270704-4270878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               143
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               73, 149
               

               Conread position:
               93-268
               

               Cow position:
               chr11:10847599-10847424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr11:11988264-11988089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               148
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr11:38835274-38835449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               148
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr11:41170536-41170710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               146
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               93-268
               

               Cow position:
               chr11:43514479-43514650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               68, 149
               

               Conread position:
               93-268
               

               Cow position:
               chr11:44157096-44157271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               65, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr11:53431909-53432084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               146
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr11:58134544-58134369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               146
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-269
               

               Cow position:
               chr11:31926324-31926153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 29
               

               Conread position:
               93-270
               

               Cow position:
               chr11:20510280-20510103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               71, 87
               

               Conread position:
               93-275
               

               Cow position:
               chr11:4027409-4027589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               68, 44
               

               Conread position:
               93-275
               

               Cow position:
               chr11:9157003-9157180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr11:44251949-44251773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               68, 47
               

               Conread position:
               93-275
               

               Cow position:
               chr11:47760540-47760726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               70, 163
               

               Conread position:
               93-282
               

               Cow position:
               chr11:76374056-76374240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               65, 90
               

               Conread position:
               93-283
               

               Cow position:
               chr11:12093710-12093526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               65, 16
               

               Conread position:
               93-283
               

               Cow position:
               chr11:12358267-12358457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               159
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 149
               

               Conread position:
               93-283
               

               Cow position:
               chr11:23877460-23877270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               152
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-283
               

               Cow position:
               chr11:24393477-24393285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               93-283
               

               Cow position:
               chr11:26124771-26124963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               158
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               62, 160
               

               Conread position:
               93-285
               

               Cow position:
               chr11:19102329-19102522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               156
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-292
               

               Cow position:
               chr11:84389784-84389584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 129
               

               Conread position:
               93-320
               

               Cow position:
               chr11:62229344-62229133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               93-342
               

               Cow position:
               chr11:66727530-66727274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               190
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               68, 170
               

               Conread position:
               93-380
               

               Cow position:
               chr11:11677501-11677214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               64, 71
               

               Conread position:
               93-397
               

               Cow position:
               chr11:52885893-52886199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               152, 64
               

               Conread position:
               93-399
               

               Cow position:
               chr11:8283629-8283302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 303
               

               Conread position:
               93-399
               

               Cow position:
               chr11:28063998-28063684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 290
               

               Conread position:
               94-267
               

               Cow position:
               chr11:5343068-5343243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               96-285
               

               Cow position:
               chr11:85393658-85393847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               65, 33
               

               Conread position:
               96-397
               

               Cow position:
               chr11:28049051-28049356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               183, 42
               

               Conread position:
               96-399
               

               Cow position:
               chr11:10090830-10090516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 287
               

               Conread position:
               97-399
               

               Cow position:
               chr11:59369973-59369663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               222
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               25, 165
               

               Conread position:
               98-210
               

               Cow position:
               chr11:63655192-63655304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               63, 108
               

               Conread position:
               98-222
               

               Cow position:
               chr11:64081938-64082062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               63, 120
               

               Conread position:
               98-224
               

               Cow position:
               chr11:20734097-20734224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-245
               

               Cow position:
               chr11:3493156-3493008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-245
               

               Cow position:
               chr11:38505461-38505608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-245
               

               Cow position:
               chr11:57627902-57628049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               63, 80
               

               Conread position:
               98-266
               

               Cow position:
               chr11:15983770-15983600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr11:17107541-17107710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr11:19064104-19064273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr11:28229612-28229781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr11:33194409-33194577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               63, 12
               

               Conread position:
               98-266
               

               Cow position:
               chr11:67450643-67450474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr11:67846426-67846595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-267
               

               Cow position:
               chr11:36744036-36744206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 92
               

               Conread position:
               98-267
               

               Cow position:
               chr11:61400906-61401077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr11:28108295-28108124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr11:64046143-64045972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr11:73477453-73477282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-293
               

               Cow position:
               chr11:9734517-9734712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               44, 164
               

               Conread position:
               99-266
               

               Cow position:
               chr11:54209761-54209595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               32, 10
               

               Conread position:
               101-277
               

               Cow position:
               chr11:31874626-31874805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               101-279
               

               Cow position:
               chr11:9606435-9606613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               53, 24
               

               Conread position:
               102-215
               

               Cow position:
               chr11:45111764-45111650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               102-254
               

               Cow position:
               chr11:4040947-4041100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               102-283
               

               Cow position:
               chr11:22934939-22934767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               53, 80
               

               Conread position:
               105-386
               

               Cow position:
               chr11:87128927-87128642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               53, 33
               

               Conread position:
               119-342
               

               Cow position:
               chr11:44495319-44495546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               173
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               39, 216
               

               Conread position:
               121-403
               

               Cow position:
               chr11:9219839-9220116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               40, 86
               

               Conread position:
               125-399
               

               Cow position:
               chr11:8261423-8261697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               36, 13
               

               Conread position:
               126-395
               

               Cow position:
               chr11:39802566-39802290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               32, 253
               

               Conread position:
               134-290
               

               Cow position:
               chr11:30125129-30125286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               24, 150
               

               Conread position:
               134-425
               

               Cow position:
               chr11:30124303-30124603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 230
               

               Conread position:
               138-275
               

               Cow position:
               chr11:75920513-75920376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 114
               

               Conread position:
               141-275
               

               Cow position:
               chr11:8887050-8887184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               14, 89
               

               Conread position:
               141-275
               

               Cow position:
               chr11:12350956-12351091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               17, 88
               

               Conread position:
               148-271
               

               Cow position:
               chr11:8520093-8519968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               148-283
               

               Cow position:
               chr11:37065013-37065150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               149-275
               

               Cow position:
               chr11:256085-256213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               149-283
               

               Cow position:
               chr11:30305349-30305213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               93-214
               

               Cow position:
               chr12:8677645-8677767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-265
               

               Cow position:
               chr12:6406207-6406379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-267
               

               Cow position:
               chr12:11098684-11098512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               148
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-268
               

               Cow position:
               chr12:22205304-22205479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr12:25100618-25100792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               93-268
               

               Cow position:
               chr12:28765579-28765753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               68, 159
               

               Conread position:
               93-275
               

               Cow position:
               chr12:14662188-14662372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr12:42859384-42859566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               150
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               50, 158
               

               Conread position:
               93-283
               

               Cow position:
               chr12:1402934-1402745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               65, 157
               

               Conread position:
               93-290
               

               Cow position:
               chr12:2283000-2282799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-323
               

               Cow position:
               chr12:21198401-21198183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               59, 92
               

               Conread position:
               93-334
               

               Cow position:
               chr12:3631424-3631665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               65, 183
               

               Conread position:
               96-267
               

               Cow position:
               chr12:27855522-27855690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               65, 21
               

               Conread position:
               96-401
               

               Cow position:
               chr12:21500900-21500593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               36, 43
               

               Conread position:
               98-245
               

               Cow position:
               chr12:8197648-8197500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-245
               

               Cow position:
               chr12:16821907-16821759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr12:21427124-21426965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               63, 40
               

               Conread position:
               98-266
               

               Cow position:
               chr12:37558983-37558819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               63, 28
               

               Conread position:
               98-267
               

               Cow position:
               chr12:43030955-43031122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               60, 47
               

               Conread position:
               98-268
               

               Cow position:
               chr12:4157809-4157638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr12:33986594-33986423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               101-266
               

               Cow position:
               chr12:32653972-32653807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               60, 37
               

               Conread position:
               118-283
               

               Cow position:
               chr12:27932533-27932690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               122-265
               

               Cow position:
               chr12:21254249-21254392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               39, 128
               

               Conread position:
               133-266
               

               Cow position:
               chr12:21902344-21902209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               138-269
               

               Cow position:
               chr12:21942161-21942029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               140-269
               

               Cow position:
               chr12:251665-251794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               21, 110
               

               Conread position:
               141-265
               

               Cow position:
               chr12:8311575-8311452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 54
               

               Conread position:
               90-301
               

               Cow position:
               chr13:11063948-11064155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               168
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               186, 66
               

               Conread position:
               92-268
               

               Cow position:
               chr13:32737603-32737774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               92-298
               

               Cow position:
               chr13:31556497-31556697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               50, 9
               

               Conread position:
               93-204
               

               Cow position:
               chr13:31612086-31612198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-204
               

               Cow position:
               chr13:32545599-32545487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-210
               

               Cow position:
               chr13:15450890-15451006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               65, 103
               

               Conread position:
               93-214
               

               Cow position:
               chr13:34910942-34911063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               65, 85
               

               Conread position:
               93-266
               

               Cow position:
               chr13:3654098-3654274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               65, 140
               

               Conread position:
               93-267
               

               Cow position:
               chr13:15924161-15924335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr13:1592934-1593109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr13:34325339-34325517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               93-270
               

               Cow position:
               chr13:30238468-30238290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               149
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-271
               

               Cow position:
               chr13:35757464-35757287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               147
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               68, 134
               

               Conread position:
               93-275
               

               Cow position:
               chr13:6667897-6668080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr13:23003086-23003269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-275
               

               Cow position:
               chr13:30303498-30303316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               150
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               68, 45
               

               Conread position:
               93-275
               

               Cow position:
               chr13:34042146-34042329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-283
               

               Cow position:
               chr13:33336203-33336385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               68, 41
               

               Conread position:
               93-285
               

               Cow position:
               chr13:9044723-9044530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               155
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-286
               

               Cow position:
               chr13:34868965-34868771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-303
               

               Cow position:
               chr13:22766248-22766042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               49, 177
               

               Conread position:
               93-377
               

               Cow position:
               chr13:22185015-22185295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               34, 77
               

               Conread position:
               93-382
               

               Cow position:
               chr13:27922004-27922299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               39, 161
               

               Conread position:
               93-394
               

               Cow position:
               chr13:43982860-43983167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 45
               

               Conread position:
               93-399
               

               Cow position:
               chr13:34937712-34937402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 111
               

               Conread position:
               93-401
               

               Cow position:
               chr13:20541814-20542138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 294
               

               Conread position:
               95-258
               

               Cow position:
               chr13:3057896-3058060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               96-266
               

               Cow position:
               chr13:31733872-31734043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               96-268
               

               Cow position:
               chr13:4941301-4941136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               62, 89
               

               Conread position:
               96-269
               

               Cow position:
               chr13:32985133-32985306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               65, 164
               

               Conread position:
               96-275
               

               Cow position:
               chr13:30656762-30656937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               155, 62
               

               Conread position:
               96-405
               

               Cow position:
               chr13:26844305-26844015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 42
               

               Conread position:
               98-209
               

               Cow position:
               chr13:58118697-58118808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               63, 92
               

               Conread position:
               98-215
               

               Cow position:
               chr13:41316070-41315952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr13:2388607-2388768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr13:17308684-17308525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr13:21839987-21840144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               63, 114
               

               Conread position:
               98-258
               

               Cow position:
               chr13:49973895-49973734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               63, 103
               

               Conread position:
               98-265
               

               Cow position:
               chr13:50109671-50109504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               63, 40
               

               Conread position:
               98-265
               

               Cow position:
               chr13:60466547-60466379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               63, 82
               

               Conread position:
               98-266
               

               Cow position:
               chr13:13324960-13324791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr13:30244467-30244636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr13:47229790-47229959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               101-264
               

               Cow position:
               chr13:2296608-2296769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               102-268
               

               Cow position:
               chr13:4484009-4483842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               59, 129
               

               Conread position:
               102-387
               

               Cow position:
               chr13:19413434-19413154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               141, 56
               

               Conread position:
               110-425
               

               Cow position:
               chr13:48357768-48357454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 48
               

               Conread position:
               118-283
               

               Cow position:
               chr13:11799558-11799727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               111, 44
               

               Conread position:
               124-275
               

               Cow position:
               chr13:34693358-34693205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               128-388
               

               Cow position:
               chr13:34766685-34766944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 122
               

               Conread position:
               141-266
               

               Cow position:
               chr13:2908257-2908384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               147-296
               

               Cow position:
               chr13:4178481-4178629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               11, 105
               

               Conread position:
               148-279
               

               Cow position:
               chr13:34142494-34142627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               206-399
               

               Cow position:
               chr13:15451131-15451319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               113, 53
               

               Conread position:
               92-223
               

               Cow position:
               chr14:29777404-29777536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               92-268
               

               Cow position:
               chr14:11154066-11154242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               145
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               69, 158
               

               Conread position:
               92-275
               

               Cow position:
               chr14:45161197-45161013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               93-210
               

               Cow position:
               chr14:45206409-45206291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               93-214
               

               Cow position:
               chr14:50138690-50138569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               93-215
               

               Cow position:
               chr14:38531640-38531763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               93-219
               

               Cow position:
               chr14:45917741-45917613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               93-220
               

               Cow position:
               chr14:48825392-48825264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-265
               

               Cow position:
               chr14:44686142-44685969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               142
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-266
               

               Cow position:
               chr14:13621046-13621217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               66, 41
               

               Conread position:
               93-267
               

               Cow position:
               chr14:7472458-7472293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               93-267
               

               Cow position:
               chr14:12742973-12743143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               68, 149
               

               Conread position:
               93-267
               

               Cow position:
               chr14:20782555-20782381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               145
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               62, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr14:5511921-5511746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr14:16919591-16919766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               146
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               39, 32
               

               Conread position:
               93-268
               

               Cow position:
               chr14:17000963-17001138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               146
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr14:17685495-17685320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               65, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr14:22031323-22031501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-268
               

               Cow position:
               chr14:28993755-28993930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               68, 149
               

               Conread position:
               93-268
               

               Cow position:
               chr14:48254204-48254381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               65, 159
               

               Conread position:
               93-269
               

               Cow position:
               chr14:13303121-13302944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               18, 158
               

               Conread position:
               93-269
               

               Cow position:
               chr14:30596285-30596464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               93-269
               

               Cow position:
               chr14:45834243-45834070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               68, 123
               

               Conread position:
               93-275
               

               Cow position:
               chr14:44287152-44287334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               68, 155
               

               Conread position:
               93-275
               

               Cow position:
               chr14:45081142-45080961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               68, 78
               

               Conread position:
               93-275
               

               Cow position:
               chr14:45711891-45712077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               27, 104
               

               Conread position:
               93-275
               

               Cow position:
               chr14:50110666-50110482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               150
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-276
               

               Cow position:
               chr14:16273204-16273381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               93-276
               

               Cow position:
               chr14:44226493-44226310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               65, 45
               

               Conread position:
               93-283
               

               Cow position:
               chr14:5529160-5528972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               154
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               68, 48
               

               Conread position:
               93-283
               

               Cow position:
               chr14:19328171-19328358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               154
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               65, 137
               

               Conread position:
               93-285
               

               Cow position:
               chr14:37223998-37223807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               159
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               68, 12
               

               Conread position:
               93-288
               

               Cow position:
               chr14:46465175-46464982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               68, 45
               

               Conread position:
               93-299
               

               Cow position:
               chr14:35386714-35386920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               160
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               68, 160
               

               Conread position:
               93-347
               

               Cow position:
               chr14:48970777-48970532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               65, 81
               

               Conread position:
               93-369
               

               Cow position:
               chr14:33342230-33341949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 155
               

               Conread position:
               93-403
               

               Cow position:
               chr14:44377899-44377595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 57
               

               Conread position:
               93-405
               

               Cow position:
               chr14:37457308-37457629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               34, 95
               

               Conread position:
               93-434
               

               Cow position:
               chr14:35423717-35423382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               199, 65
               

               Conread position:
               94-396
               

               Cow position:
               chr14:37413343-37413655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               104, 95
               

               Conread position:
               95-245
               

               Cow position:
               chr14:33393688-33393840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               122, 77
               

               Conread position:
               95-266
               

               Cow position:
               chr14:9045656-9045484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               95-286
               

               Cow position:
               chr14:46474934-46474743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               63, 86
               

               Conread position:
               96-222
               

               Cow position:
               chr14:43558065-43557940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               96-365
               

               Cow position:
               chr14:47923203-47922932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               62, 33
               

               Conread position:
               96-368
               

               Cow position:
               chr14:41408980-41408697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               65, 42
               

               Conread position:
               96-378
               

               Cow position:
               chr14:38815713-38816001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               65, 128
               

               Conread position:
               98-245
               

               Cow position:
               chr14:750656-750509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               63, 40
               

               Conread position:
               98-247
               

               Cow position:
               chr14:29047816-29047966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr14:2284425-2284265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               63, 16
               

               Conread position:
               98-258
               

               Cow position:
               chr14:45029037-45029198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr14:17491370-17491538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               63, 28
               

               Conread position:
               98-266
               

               Cow position:
               chr14:23257446-23257277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr14:23900713-23900884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               100-268
               

               Cow position:
               chr14:13779046-13778879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               61, 150
               

               Conread position:
               101-286
               

               Cow position:
               chr14:13863997-13864177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               102-245
               

               Cow position:
               chr14:30584870-30585013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               53, 76
               

               Conread position:
               102-265
               

               Cow position:
               chr14:45671962-45672127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               102-287
               

               Cow position:
               chr14:17760810-17760995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               148
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               59, 163
               

               Conread position:
               102-342
               

               Cow position:
               chr14:44775963-44776204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               56, 119
               

               Conread position:
               104-266
               

               Cow position:
               chr14:19620308-19620145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               104-392
               

               Cow position:
               chr14:45302870-45303156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 54
               

               Conread position:
               105-346
               

               Cow position:
               chr14:13323785-13324031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               53, 85
               

               Conread position:
               118-437
               

               Cow position:
               chr14:44256905-44257231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               14, 179
               

               Conread position:
               128-436
               

               Cow position:
               chr14:41489580-41489898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 12
               

               Conread position:
               130-386
               

               Cow position:
               chr14:34776283-34776023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               31, 15
               

               Conread position:
               133-286
               

               Cow position:
               chr14:5201022-5201176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               135-275
               

               Cow position:
               chr14:22242937-22242797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               23, 5
               

               Conread position:
               135-283
               

               Cow position:
               chr14:15276523-15276670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               26, 115
               

               Conread position:
               136-386
               

               Cow position:
               chr14:46519148-46518890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               93, 40
               

               Conread position:
               137-275
               

               Cow position:
               chr14:42198892-42198754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               116, 24
               

               Conread position:
               141-275
               

               Cow position:
               chr14:23690177-23690313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               147-289
               

               Cow position:
               chr14:44855378-44855520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               14, 96
               

               Conread position:
               148-275
               

               Cow position:
               chr14:7830495-7830624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               149-275
               

               Cow position:
               chr14:13273289-13273163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               203-389
               

               Cow position:
               chr14:48825169-48824979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               118, 155
               

               Conread position:
               213-368
               

               Cow position:
               chr14:40339978-40339820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               45, 49
               

               Conread position:
               218-398
               

               Cow position:
               chr14:12609576-12609394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               102, 61
               

               Conread position:
               90-209
               

               Cow position:
               chr15:4812705-4812585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               90-279
               

               Cow position:
               chr15:7934428-7934243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               71, 48
               

               Conread position:
               91-401
               

               Cow position:
               chr15:24794452-24794151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 100
               

               Conread position:
               92-266
               

               Cow position:
               chr15:328530-328353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               92-266
               

               Cow position:
               chr15:53339117-53338950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               92-267
               

               Cow position:
               chr15:4671533-4671354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               93-213
               

               Cow position:
               chr15:3261234-3261355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-224
               

               Cow position:
               chr15:35647567-35647699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-234
               

               Cow position:
               chr15:369061-369203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-266
               

               Cow position:
               chr15:56587-56407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               68, 164
               

               Conread position:
               93-266
               

               Cow position:
               chr15:19737953-19738126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               144
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-267
               

               Cow position:
               chr15:2076747-2076574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               62, 45
               

               Conread position:
               93-267
               

               Cow position:
               chr15:17292543-17292363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               93-267
               

               Cow position:
               chr15:18576813-18576640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               68, 26
               

               Conread position:
               93-267
               

               Cow position:
               chr15:35753497-35753672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-268
               

               Cow position:
               chr15:4385367-4385193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               68, 153
               

               Conread position:
               93-268
               

               Cow position:
               chr15:7837344-7837169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr15:15347020-15347194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               146
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               65, 45
               

               Conread position:
               93-268
               

               Cow position:
               chr15:21665646-21665821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr15:31358986-31358811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr15:42936808-42936639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               93-269
               

               Cow position:
               chr15:7260729-7260550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-270
               

               Cow position:
               chr15:12421065-12421244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               93-270
               

               Cow position:
               chr15:44828894-44828716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-274
               

               Cow position:
               chr15:37392590-37392409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               68, 132
               

               Conread position:
               93-275
               

               Cow position:
               chr15:315760-315942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-275
               

               Cow position:
               chr15:4765305-4765122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr15:6155849-6156036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr15:8750522-8750343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr15:10888711-10888522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               113, 66
               

               Conread position:
               93-275
               

               Cow position:
               chr15:32494287-32494469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-275
               

               Cow position:
               chr15:51216688-51216506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               148
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               68, 149
               

               Conread position:
               93-276
               

               Cow position:
               chr15:524761-524945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-279
               

               Cow position:
               chr15:41366269-41366083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               65, 87
               

               Conread position:
               93-283
               

               Cow position:
               chr15:44070022-44069834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               19, 110
               

               Conread position:
               93-285
               

               Cow position:
               chr15:4922250-4922058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               153
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-293
               

               Cow position:
               chr15:24295194-24294999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               93-298
               

               Cow position:
               chr15:4961741-4961539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               171, 60
               

               Conread position:
               93-315
               

               Cow position:
               chr15:7965865-7966095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               50, 137
               

               Conread position:
               93-335
               

               Cow position:
               chr15:51715057-51714812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-387
               

               Cow position:
               chr15:16508093-16507789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               188, 58
               

               Conread position:
               93-401
               

               Cow position:
               chr15:1237782-1237474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               141, 65
               

               Conread position:
               93-403
               

               Cow position:
               chr15:36643033-36642724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 61
               

               Conread position:
               93-414
               

               Cow position:
               chr15:9430038-9429724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               226, 28
               

               Conread position:
               96-266
               

               Cow position:
               chr15:28490052-28490221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               96-266
               

               Cow position:
               chr15:50123851-50124022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               96-267
               

               Cow position:
               chr15:1764186-1764015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-275
               

               Cow position:
               chr15:18332732-18332911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               62, 45
               

               Conread position:
               96-287
               

               Cow position:
               chr15:9912730-9912543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               65, 35
               

               Conread position:
               96-342
               

               Cow position:
               chr15:35735668-35735420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               62, 38
               

               Conread position:
               98-221
               

               Cow position:
               chr15:5980453-5980327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               98-245
               

               Cow position:
               chr15:3009763-3009910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               64, 40
               

               Conread position:
               98-250
               

               Cow position:
               chr15:42320332-42320485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-255
               

               Cow position:
               chr15:2012169-2012013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               63, 131
               

               Conread position:
               98-258
               

               Cow position:
               chr15:1519061-1519222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr15:2647566-2647728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr15:4196551-4196391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               63, 143
               

               Conread position:
               98-265
               

               Cow position:
               chr15:3888966-3888800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               63, 114
               

               Conread position:
               98-266
               

               Cow position:
               chr15:444696-444528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               63, 144
               

               Conread position:
               98-266
               

               Cow position:
               chr15:1834372-1834541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               42, 153
               

               Conread position:
               98-266
               

               Cow position:
               chr15:6471830-6471997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr15:18267898-18268067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr15:50147167-50146998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-267
               

               Cow position:
               chr15:4142729-4142900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr15:1882417-1882588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr15:36077336-36077165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr15:36971010-36970842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               63, 19
               

               Conread position:
               98-269
               

               Cow position:
               chr15:1772587-1772416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               63, 163
               

               Conread position:
               98-283
               

               Cow position:
               chr15:29009928-29009744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               63, 163
               

               Conread position:
               100-275
               

               Cow position:
               chr15:7544974-7544799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               58, 129
               

               Conread position:
               101-269
               

               Cow position:
               chr15:7234389-7234223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               102-265
               

               Cow position:
               chr15:17080117-17080281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               102-401
               

               Cow position:
               chr15:12615563-12615269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               51, 105
               

               Conread position:
               103-301
               

               Cow position:
               chr15:32673462-32673658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               55, 25
               

               Conread position:
               111-266
               

               Cow position:
               chr15:4682312-4682157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               50, 98
               

               Conread position:
               115-386
               

               Cow position:
               chr15:24716942-24716679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               16, 47
               

               Conread position:
               117-399
               

               Cow position:
               chr15:36626219-36626480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               44, 127
               

               Conread position:
               118-407
               

               Cow position:
               chr15:21449774-21449486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               207
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               40, 139
               

               Conread position:
               121-265
               

               Cow position:
               chr15:6592872-6593017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               121-274
               

               Cow position:
               chr15:2924951-2924805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               129-269
               

               Cow position:
               chr15:6553794-6553933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               136-387
               

               Cow position:
               chr15:686968-686728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               23, 39
               

               Conread position:
               142-275
               

               Cow position:
               chr15:36648961-36648825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               143-266
               

               Cow position:
               chr15:23156790-23156916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               144-275
               

               Cow position:
               chr15:25185914-25186045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               17, 85
               

               Conread position:
               148-266
               

               Cow position:
               chr15:38195534-38195414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               148-267
               

               Cow position:
               chr15:17271352-17271471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               108, 9
               

               Conread position:
               148-275
               

               Cow position:
               chr15:10787082-10787211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               208-399
               

               Cow position:
               chr15:35647922-35648122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               81, 173
               

               Conread position:
               208-403
               

               Cow position:
               chr15:369369-369572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               71, 49
               

               Conread position:
               91-269
               

               Cow position:
               chr16:2238986-2239164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               70, 47
               

               Conread position:
               91-394
               

               Cow position:
               chr16:42739352-42739648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               227
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               38, 48
               

               Conread position:
               91-399
               

               Cow position:
               chr16:25257691-25257377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 224
               

               Conread position:
               92-283
               

               Cow position:
               chr16:25341720-25341529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               155
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               66, 138
               

               Conread position:
               93-198
               

               Cow position:
               chr16:15492981-15492875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-214
               

               Cow position:
               chr16:14666060-14666182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-224
               

               Cow position:
               chr16:24105456-24105325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               93-227
               

               Cow position:
               chr16:18498565-18498700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               65, 120
               

               Conread position:
               93-255
               

               Cow position:
               chr16:18687376-18687539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               93-267
               

               Cow position:
               chr16:15566493-15566320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               65, 114
               

               Conread position:
               93-267
               

               Cow position:
               chr16:26663504-26663328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               65, 159
               

               Conread position:
               93-268
               

               Cow position:
               chr16:5484072-5483901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               68, 150
               

               Conread position:
               93-268
               

               Cow position:
               chr16:8816353-8816526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr16:10437994-10437819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               146
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr16:12538173-12538347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               147
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr16:23983063-23982888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               68, 148
               

               Conread position:
               93-268
               

               Cow position:
               chr16:25457712-25457887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               146
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr16:40296425-40296600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-275
               

               Cow position:
               chr16:407279-407461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               149
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               65, 157
               

               Conread position:
               93-275
               

               Cow position:
               chr16:1567701-1567884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               148
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr16:2483388-2483572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               149
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               65, 90
               

               Conread position:
               93-275
               

               Cow position:
               chr16:2727535-2727718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               149
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr16:28471350-28471532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               147
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               65, 79
               

               Conread position:
               93-275
               

               Cow position:
               chr16:34530074-34529891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-283
               

               Cow position:
               chr16:2411215-2411405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               151
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-283
               

               Cow position:
               chr16:23252753-23252943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               70, 158
               

               Conread position:
               93-285
               

               Cow position:
               chr16:43897518-43897711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               156
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-287
               

               Cow position:
               chr16:31592161-31592349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               65, 127
               

               Conread position:
               93-399
               

               Cow position:
               chr16:5890265-5889966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 80
               

               Conread position:
               93-399
               

               Cow position:
               chr16:23808174-23807872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 95
               

               Conread position:
               93-399
               

               Cow position:
               chr16:29033794-29033487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 65
               

               Conread position:
               93-399
               

               Cow position:
               chr16:49235075-49235375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 120
               

               Conread position:
               94-419
               

               Cow position:
               chr16:47473322-47473011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               67, 129
               

               Conread position:
               95-258
               

               Cow position:
               chr16:31832376-31832212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               96-285
               

               Cow position:
               chr16:15184552-15184363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               65, 33
               

               Conread position:
               96-300
               

               Cow position:
               chr16:25085391-25085188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               79, 179
               

               Conread position:
               96-396
               

               Cow position:
               chr16:9930685-9930404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               48, 155
               

               Conread position:
               96-401
               

               Cow position:
               chr16:16271847-16272161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               227
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               62, 167
               

               Conread position:
               97-268
               

               Cow position:
               chr16:10203690-10203852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               61, 101
               

               Conread position:
               98-247
               

               Cow position:
               chr16:41163318-41163468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr16:25188377-25188221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               63, 131
               

               Conread position:
               98-265
               

               Cow position:
               chr16:28170625-28170791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               63, 75
               

               Conread position:
               98-266
               

               Cow position:
               chr16:32480-32310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr16:5661590-5661422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               63, 40
               

               Conread position:
               98-266
               

               Cow position:
               chr16:10375837-10376006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr16:53046095-53045924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               101-268
               

               Cow position:
               chr16:25441369-25441202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               140
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               60, 149
               

               Conread position:
               101-459
               

               Cow position:
               chr16:25156133-25156498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 56
               

               Conread position:
               102-245
               

               Cow position:
               chr16:4302595-4302738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               118-266
               

               Cow position:
               chr16:1431885-1431736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               118-364
               

               Cow position:
               chr16:18763893-18764136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               189
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               43, 181
               

               Conread position:
               127-266
               

               Cow position:
               chr16:50506908-50506767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               134-268
               

               Cow position:
               chr16:27734080-27734214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               27, 116
               

               Conread position:
               141-265
               

               Cow position:
               chr16:36361660-36361782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               17, 30
               

               Conread position:
               141-266
               

               Cow position:
               chr16:14430299-14430172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               141-275
               

               Cow position:
               chr16:20254605-20254741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               147-315
               

               Cow position:
               chr16:29675677-29675848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               11, 126
               

               Conread position:
               194-399
               

               Cow position:
               chr16:49256472-49256682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               113, 70
               

               Conread position:
               230-421
               

               Cow position:
               chr16:18499094-18499289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               31, 50
               

               Conread position:
               91-298
               

               Cow position:
               chr17:15384613-15384405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               46, 192
               

               Conread position:
               92-268
               

               Cow position:
               chr17:14894485-14894309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               144
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               69, 158
               

               Conread position:
               92-268
               

               Cow position:
               chr17:19269036-19269210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               66, 106
               

               Conread position:
               93-209
               

               Cow position:
               chr17:14051786-14051903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               34, 67
               

               Conread position:
               93-223
               

               Cow position:
               chr17:15324152-15324021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-224
               

               Cow position:
               chr17:151548-151679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               65, 93
               

               Conread position:
               93-255
               

               Cow position:
               chr17:5226947-5226784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-266
               

               Cow position:
               chr17:1880414-1880248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               65, 29
               

               Conread position:
               93-269
               

               Cow position:
               chr17:250490-250310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               93-269
               

               Cow position:
               chr17:4060429-4060251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               65, 148
               

               Conread position:
               93-275
               

               Cow position:
               chr17:3642506-3642688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               150
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-275
               

               Cow position:
               chr17:6260173-6259992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               65, 91
               

               Conread position:
               93-275
               

               Cow position:
               chr17:11087394-11087576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               150
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-275
               

               Cow position:
               chr17:15850728-15850545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-275
               

               Cow position:
               chr17:22132560-22132376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr17:24029669-24029852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               151
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-282
               

               Cow position:
               chr17:6068885-6068701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               93-283
               

               Cow position:
               chr17:2579945-2579757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               93-283
               

               Cow position:
               chr17:25737993-25737805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               156
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               65, 149
               

               Conread position:
               93-283
               

               Cow position:
               chr17:40805148-40804959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               156
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-293
               

               Cow position:
               chr17:16857195-16857395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               65, 46
               

               Conread position:
               93-298
               

               Cow position:
               chr17:14040705-14040904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               62, 73
               

               Conread position:
               93-387
               

               Cow position:
               chr17:18300070-18300370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 21
               

               Conread position:
               93-387
               

               Cow position:
               chr17:42265253-42264948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               28, 52
               

               Conread position:
               97-405
               

               Cow position:
               chr17:4082387-4082066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               98-214
               

               Cow position:
               chr17:11376465-11376582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr17:227989-228150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr17:31767720-31767881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr17:34156447-34156286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr17:43952244-43952405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr17:181680-181513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr17:6120027-6119858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr17:8209426-8209256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr17:14216707-14216876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-267
               

               Cow position:
               chr17:1382495-1382666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr17:24634273-24634102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-269
               

               Cow position:
               chr17:15143048-15143220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-269
               

               Cow position:
               chr17:15156646-15156817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               63, 128
               

               Conread position:
               101-264
               

               Cow position:
               chr17:20665410-20665576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               101-269
               

               Cow position:
               chr17:2248268-2248436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               60, 160
               

               Conread position:
               102-245
               

               Cow position:
               chr17:24782482-24782338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               102-258
               

               Cow position:
               chr17:2262418-2262260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               102-258
               

               Cow position:
               chr17:15436106-15435949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               102-266
               

               Cow position:
               chr17:23324139-23324304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               107-268
               

               Cow position:
               chr17:18103370-18103529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               121-270
               

               Cow position:
               chr17:13856469-13856619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               40, 17
               

               Conread position:
               138-284
               

               Cow position:
               chr17:6001129-6001274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               141-265
               

               Cow position:
               chr17:27346081-27345956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               141-267
               

               Cow position:
               chr17:602156-602284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               141-270
               

               Cow position:
               chr17:18185251-18185383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               141-275
               

               Cow position:
               chr17:20072962-20073098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               147-283
               

               Cow position:
               chr17:35592494-35592356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               202-342
               

               Cow position:
               chr17:14052016-14052156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               108, 17
               

               Conread position:
               239-449
               

               Cow position:
               chr17:22558183-22557966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               27, 140
               

               Conread position:
               92-399
               

               Cow position:
               chr18:54170998-54171310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 168
               

               Conread position:
               93-237
               

               Cow position:
               chr18:16088684-16088539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-258
               

               Cow position:
               chr18:51481372-51481208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               68, 19
               

               Conread position:
               93-267
               

               Cow position:
               chr18:27837778-27837952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               144
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-267
               

               Cow position:
               chr18:28973354-28973538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               41, 167
               

               Conread position:
               93-268
               

               Cow position:
               chr18:14416516-14416339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               68, 159
               

               Conread position:
               93-268
               

               Cow position:
               chr18:16176078-16176254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               33, 160
               

               Conread position:
               93-268
               

               Cow position:
               chr18:25351287-25351112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               65, 137
               

               Conread position:
               93-268
               

               Cow position:
               chr18:36508871-36508696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               146
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr18:41840286-41840461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               65, 157
               

               Conread position:
               93-275
               

               Cow position:
               chr18:37505599-37505419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               146
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr18:52651456-52651275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               147
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               70, 129
               

               Conread position:
               93-275
               

               Cow position:
               chr18:54023587-54023769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               147
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               68, 165
               

               Conread position:
               93-283
               

               Cow position:
               chr18:14130929-14130739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               153
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               68, 148
               

               Conread position:
               93-283
               

               Cow position:
               chr18:40478921-40478732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               153
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               65, 149
               

               Conread position:
               93-285
               

               Cow position:
               chr18:32652739-32652548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               34, 88
               

               Conread position:
               93-320
               

               Cow position:
               chr18:33750550-33750325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               62, 41
               

               Conread position:
               93-327
               

               Cow position:
               chr18:29765511-29765264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-350
               

               Cow position:
               chr18:54004048-54003809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               238, 49
               

               Conread position:
               94-267
               

               Cow position:
               chr18:33336402-33336226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               146
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               96-266
               

               Cow position:
               chr18:11274577-11274748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               96-268
               

               Cow position:
               chr18:23798181-23798011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               62, 111
               

               Conread position:
               96-283
               

               Cow position:
               chr18:27987599-27987413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               65, 154
               

               Conread position:
               96-385
               

               Cow position:
               chr18:8169237-8168942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               217
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               62, 133
               

               Conread position:
               98-230
               

               Cow position:
               chr18:51660874-51660741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr18:24040198-24040366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr18:51342213-51342044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr18:51462553-51462721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               63, 75
               

               Conread position:
               98-266
               

               Cow position:
               chr18:55088394-55088566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr18:22603014-22602843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr18:33953049-33953219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               63, 25
               

               Conread position:
               102-265
               

               Cow position:
               chr18:33269353-33269191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               116-258
               

               Cow position:
               chr18:19352886-19352748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               135-275
               

               Cow position:
               chr18:24700616-24700757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               141-266
               

               Cow position:
               chr18:16534469-16534343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               141-275
               

               Cow position:
               chr18:43146439-43146570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               142-265
               

               Cow position:
               chr18:47719093-47719218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               142-275
               

               Cow position:
               chr18:17991931-17992065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               16, 25
               

               Conread position:
               147-254
               

               Cow position:
               chr18:2019199-2019307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               229-397
               

               Cow position:
               chr18:51275531-51275702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               87, 45
               

               Conread position:
               92-268
               

               Cow position:
               chr19:33942145-33941978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               66, 90
               

               Conread position:
               92-394
               

               Cow position:
               chr19:32182537-32182846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               40, 31
               

               Conread position:
               93-234
               

               Cow position:
               chr19:4386158-4386012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               93-266
               

               Cow position:
               chr19:40817166-40817334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               65, 17
               

               Conread position:
               93-267
               

               Cow position:
               chr19:204499-204324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-267
               

               Cow position:
               chr19:5729372-5729198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr19:28581118-28581293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr19:39185003-39185178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-269
               

               Cow position:
               chr19:2273843-2274020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-270
               

               Cow position:
               chr19:341762-341585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               70, 160
               

               Conread position:
               93-283
               

               Cow position:
               chr19:172749-172564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               93-292
               

               Cow position:
               chr19:75712-75904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               65, 28
               

               Conread position:
               93-293
               

               Cow position:
               chr19:893065-893265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               161
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 197
               

               Conread position:
               93-299
               

               Cow position:
               chr19:438899-439103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               65, 45
               

               Conread position:
               93-373
               

               Cow position:
               chr19:33873969-33873700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               205
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-397
               

               Cow position:
               chr19:39668966-39669277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 272
               

               Conread position:
               93-403
               

               Cow position:
               chr19:377034-377356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               65, 34
               

               Conread position:
               93-423
               

               Cow position:
               chr19:27051973-27052298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 110
               

               Conread position:
               93-459
               

               Cow position:
               chr19:3138480-3138110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 150
               

               Conread position:
               94-399
               

               Cow position:
               chr19:136472-136795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               64, 32
               

               Conread position:
               95-258
               

               Cow position:
               chr19:43144247-43144086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr19:38428-38268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               96-258
               

               Cow position:
               chr19:32211540-32211703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               96-267
               

               Cow position:
               chr19:40851898-40852070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               97-275
               

               Cow position:
               chr19:7488850-7488673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               61, 77
               

               Conread position:
               98-258
               

               Cow position:
               chr19:7342598-7342441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               63, 103
               

               Conread position:
               98-266
               

               Cow position:
               chr19:28593795-28593626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr19:5208703-5208532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               99-403
               

               Cow position:
               chr19:352113-352422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               34, 117
               

               Conread position:
               100-213
               

               Cow position:
               chr19:168071-168185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               90
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               101-266
               

               Cow position:
               chr19:773124-772959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               60, 149
               

               Conread position:
               101-266
               

               Cow position:
               chr19:52151302-52151468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               101-268
               

               Cow position:
               chr19:39391043-39390876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               60, 149
               

               Conread position:
               102-265
               

               Cow position:
               chr19:20105238-20105067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               132-266
               

               Cow position:
               chr19:417165-417029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               135-397
               

               Cow position:
               chr19:162600-162865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               155, 224
               

               Conread position:
               138-351
               

               Cow position:
               chr19:263645-263429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               20, 13
               

               Conread position:
               141-284
               

               Cow position:
               chr19:28376984-28376839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               148-374
               

               Cow position:
               chr19:35377649-35377413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               97, 102
               

               Conread position:
               149-275
               

               Cow position:
               chr19:32666010-32665882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               168-426
               

               Cow position:
               chr19:32222552-32222819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 213
               

               Conread position:
               177-399
               

               Cow position:
               chr19:39689481-39689253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               64, 161
               

               Conread position:
               179-399
               

               Cow position:
               chr19:43471-43246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               103, 198
               

               Conread position:
               92-376
               

               Cow position:
               chr2:45967964-45968247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               69, 138
               

               Conread position:
               93-200
               

               Cow position:
               chr2:6961443-6961335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-218
               

               Cow position:
               chr2:31297775-31297651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               93-220
               

               Cow position:
               chr2:16290320-16290192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-231
               

               Cow position:
               chr2:781455-781594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-240
               

               Cow position:
               chr2:19011325-19011177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-244
               

               Cow position:
               chr2:47603267-47603419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-266
               

               Cow position:
               chr2:5870374-5870547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               65, 107
               

               Conread position:
               93-266
               

               Cow position:
               chr2:41172649-41172480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               65, 97
               

               Conread position:
               93-267
               

               Cow position:
               chr2:10732786-10732957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               68, 155
               

               Conread position:
               93-267
               

               Cow position:
               chr2:50983245-50983418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               65, 33
               

               Conread position:
               93-268
               

               Cow position:
               chr2:282708-282882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               68, 134
               

               Conread position:
               93-268
               

               Cow position:
               chr2:8118521-8118346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               146
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr2:12224329-12224504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               65, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr2:36980359-36980185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               65, 88
               

               Conread position:
               93-269
               

               Cow position:
               chr2:22077762-22077584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               68, 154
               

               Conread position:
               93-275
               

               Cow position:
               chr2:24146843-24146661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               147
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               68, 45
               

               Conread position:
               93-275
               

               Cow position:
               chr2:44991312-44991494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               65, 157
               

               Conread position:
               93-275
               

               Cow position:
               chr2:65938467-65938648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               65, 108
               

               Conread position:
               93-275
               

               Cow position:
               chr2:81256791-81256607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               49, 159
               

               Conread position:
               93-276
               

               Cow position:
               chr2:13045721-13045905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               155
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-276
               

               Cow position:
               chr2:69584642-69584828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               68, 45
               

               Conread position:
               93-277
               

               Cow position:
               chr2:175547-175733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               93-283
               

               Cow position:
               chr2:16900234-16900045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               153
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               69, 158
               

               Conread position:
               93-283
               

               Cow position:
               chr2:28793237-28793047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               157
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-284
               

               Cow position:
               chr2:52062650-52062462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               68, 28
               

               Conread position:
               93-285
               

               Cow position:
               chr2:11159142-11159335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               157
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-293
               

               Cow position:
               chr2:53329739-53329538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               160
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               68, 158
               

               Conread position:
               93-304
               

               Cow position:
               chr2:51998984-51999202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               65, 97
               

               Conread position:
               93-344
               

               Cow position:
               chr2:36053016-36053259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               193
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               65, 28
               

               Conread position:
               93-399
               

               Cow position:
               chr2:1363144-1362834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 48
               

               Conread position:
               93-399
               

               Cow position:
               chr2:34564617-34564934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 290
               

               Conread position:
               93-399
               

               Cow position:
               chr2:36030362-36030666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               233
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               65, 32
               

               Conread position:
               93-399
               

               Cow position:
               chr2:39622606-39622300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 219
               

               Conread position:
               93-405
               

               Cow position:
               chr2:7902999-7902691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 124
               

               Conread position:
               95-259
               

               Cow position:
               chr2:5904881-5905048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               95-266
               

               Cow position:
               chr2:2381083-2380911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               66, 43
               

               Conread position:
               95-336
               

               Cow position:
               chr2:198809-199048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               66, 134
               

               Conread position:
               95-386
               

               Cow position:
               chr2:29030127-29029836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               44, 142
               

               Conread position:
               96-266
               

               Cow position:
               chr2:9907888-9907717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               96-386
               

               Cow position:
               chr2:28748130-28747841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               60, 38
               

               Conread position:
               97-210
               

               Cow position:
               chr2:42671012-42671126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               97-241
               

               Cow position:
               chr2:80292973-80293118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               97-266
               

               Cow position:
               chr2:10186254-10186421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               97-283
               

               Cow position:
               chr2:50077578-50077392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               98-245
               

               Cow position:
               chr2:59413708-59413855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               63, 43
               

               Conread position:
               98-258
               

               Cow position:
               chr2:51990276-51990436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               63, 40
               

               Conread position:
               98-266
               

               Cow position:
               chr2:212249-212417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               60, 143
               

               Conread position:
               98-266
               

               Cow position:
               chr2:2088200-2088369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr2:4403184-4403353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr2:10611658-10611822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               63, 12
               

               Conread position:
               98-266
               

               Cow position:
               chr2:25030507-25030672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               63, 18
               

               Conread position:
               98-266
               

               Cow position:
               chr2:44091274-44091105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr2:47038441-47038610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr2:57335169-57335000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr2:67419327-67419495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               63, 129
               

               Conread position:
               98-267
               

               Cow position:
               chr2:3324587-3324762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               98-267
               

               Cow position:
               chr2:49472220-49472049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-267
               

               Cow position:
               chr2:80955663-80955834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr2:5474489-5474318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr2:49590374-49590203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-269
               

               Cow position:
               chr2:2184283-2184454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               63, 162
               

               Conread position:
               98-270
               

               Cow position:
               chr2:26921658-26921486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               63, 160
               

               Conread position:
               98-275
               

               Cow position:
               chr2:28650254-28650429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               98-277
               

               Cow position:
               chr2:54737479-54737298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-279
               

               Cow position:
               chr2:2412823-2413003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               64, 163
               

               Conread position:
               98-351
               

               Cow position:
               chr2:41686486-41686231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               63, 85
               

               Conread position:
               101-266
               

               Cow position:
               chr2:52616440-52616274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               101-266
               

               Cow position:
               chr2:57588666-57588500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               101-275
               

               Cow position:
               chr2:4926199-4926374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               144
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               101-395
               

               Cow position:
               chr2:5963105-5963411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 283
               

               Conread position:
               102-266
               

               Cow position:
               chr2:39421548-39421383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               102-271
               

               Cow position:
               chr2:78762432-78762264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               157, 56
               

               Conread position:
               102-387
               

               Cow position:
               chr2:11729837-11729561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 36
               

               Conread position:
               103-433
               

               Cow position:
               chr2:49604908-49604591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               55, 97
               

               Conread position:
               104-292
               

               Cow position:
               chr2:32655325-32655143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               18, 137
               

               Conread position:
               107-269
               

               Cow position:
               chr2:24922362-24922197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               54, 68
               

               Conread position:
               110-268
               

               Cow position:
               chr2:57141725-57141884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               111-238
               

               Cow position:
               chr2:16075777-16075903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               22, 30
               

               Conread position:
               111-258
               

               Cow position:
               chr2:51990571-51990718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               50, 27
               

               Conread position:
               111-314
               

               Cow position:
               chr2:3789863-3790068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               31, 49
               

               Conread position:
               114-396
               

               Cow position:
               chr2:78742273-78741978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               44, 273
               

               Conread position:
               121-387
               

               Cow position:
               chr2:72681663-72681928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 133
               

               Conread position:
               123-255
               

               Cow position:
               chr2:572991-572858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               136-268
               

               Cow position:
               chr2:80517001-80516868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               141-266
               

               Cow position:
               chr2:2364122-2363995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               141-275
               

               Cow position:
               chr2:423005-422870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 7
               

               Conread position:
               141-275
               

               Cow position:
               chr2:44346649-44346517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               17, 101
               

               Conread position:
               148-287
               

               Cow position:
               chr2:26869198-26869057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               93-224
               

               Cow position:
               chr20:7114987-7115119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-234
               

               Cow position:
               chr20:19353030-19352891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               65, 92
               

               Conread position:
               93-267
               

               Cow position:
               chr20:28161268-28161096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               143
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-267
               

               Cow position:
               chr20:30684820-30684646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               142
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr20:5535435-5535262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               143
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-268
               

               Cow position:
               chr20:8003729-8003901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               145
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               93-268
               

               Cow position:
               chr20:12438261-12438436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr20:13763404-13763229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr20:15292504-15292335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-268
               

               Cow position:
               chr20:21914827-21914652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               146
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr20:23469166-23469341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr20:28565094-28565271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               68, 139
               

               Conread position:
               93-274
               

               Cow position:
               chr20:16179316-16179503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-274
               

               Cow position:
               chr20:42076565-42076743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr20:3271204-3271021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               38, 159
               

               Conread position:
               93-275
               

               Cow position:
               chr20:25850492-25850674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               149
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               68, 149
               

               Conread position:
               93-283
               

               Cow position:
               chr20:15097377-15097566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               153
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-283
               

               Cow position:
               chr20:29948999-29948809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               112, 64
               

               Conread position:
               93-294
               

               Cow position:
               chr20:13679542-13679745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               66, 171
               

               Conread position:
               93-307
               

               Cow position:
               chr20:35124995-35124779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-401
               

               Cow position:
               chr20:8216018-8215693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 286
               

               Conread position:
               96-267
               

               Cow position:
               chr20:23799382-23799211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               65, 154
               

               Conread position:
               96-275
               

               Cow position:
               chr20:21394091-21393910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr20:38351166-38351005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr20:19438427-19438258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-269
               

               Cow position:
               chr20:25961591-25961418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               103-266
               

               Cow position:
               chr20:823250-823086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               105-275
               

               Cow position:
               chr20:10845632-10845805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               106-387
               

               Cow position:
               chr20:19051144-19051436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               37, 11
               

               Conread position:
               108-268
               

               Cow position:
               chr20:27869683-27869522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               47, 84
               

               Conread position:
               123-403
               

               Cow position:
               chr20:18314843-18315109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 76
               

               Conread position:
               132-275
               

               Cow position:
               chr20:15946919-15947065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               134-417
               

               Cow position:
               chr20:35105239-35104951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               27, 38
               

               Conread position:
               141-275
               

               Cow position:
               chr20:3251683-3251818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               143-275
               

               Cow position:
               chr20:3033513-3033378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               89-369
               

               Cow position:
               chr21:25975893-25975598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               90-327
               

               Cow position:
               chr21:23812793-23812553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               200, 68
               

               Conread position:
               90-399
               

               Cow position:
               chr21:29700-29405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               225
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               47, 139
               

               Conread position:
               92-393
               

               Cow position:
               chr21:21925700-21926010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               46, 242
               

               Conread position:
               93-210
               

               Cow position:
               chr21:27070649-27070767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-213
               

               Cow position:
               chr21:18819551-18819672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-218
               

               Cow position:
               chr21:47949677-47949552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               49, 17
               

               Conread position:
               93-224
               

               Cow position:
               chr21:1287608-1287738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               68, 36
               

               Conread position:
               93-264
               

               Cow position:
               chr21:2416826-2416660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               62, 41
               

               Conread position:
               93-264
               

               Cow position:
               chr21:7266913-7267091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-267
               

               Cow position:
               chr21:467504-467333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               93-267
               

               Cow position:
               chr21:4589373-4589547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               147
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               35, 95
               

               Conread position:
               93-267
               

               Cow position:
               chr21:10567287-10567113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               144
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr21:10850695-10850521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               93-268
               

               Cow position:
               chr21:13313384-13313209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               68, 155
               

               Conread position:
               93-268
               

               Cow position:
               chr21:28735848-28735672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-268
               

               Cow position:
               chr21:30562421-30562246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr21:30599309-30599482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               68, 137
               

               Conread position:
               93-268
               

               Cow position:
               chr21:31559041-31559212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               65, 145
               

               Conread position:
               93-268
               

               Cow position:
               chr21:35144375-35144200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-275
               

               Cow position:
               chr21:2673996-2674176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               69, 33
               

               Conread position:
               93-275
               

               Cow position:
               chr21:3779387-3779202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               151
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr21:40271062-40271245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               152
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr21:48116719-48116537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-285
               

               Cow position:
               chr21:146541-146348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               154
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               70, 157
               

               Conread position:
               93-285
               

               Cow position:
               chr21:2883128-2883323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               18, 159
               

               Conread position:
               93-367
               

               Cow position:
               chr21:20743891-20744162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               42, 135
               

               Conread position:
               93-394
               

               Cow position:
               chr21:23861938-23861628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               219
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               62, 288
               

               Conread position:
               93-396
               

               Cow position:
               chr21:2711116-2710828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 116
               

               Conread position:
               93-397
               

               Cow position:
               chr21:359980-359675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 92
               

               Conread position:
               93-401
               

               Cow position:
               chr21:9892551-9892250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               226
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               65, 137
               

               Conread position:
               93-403
               

               Cow position:
               chr21:2540469-2540780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 101
               

               Conread position:
               96-283
               

               Cow position:
               chr21:33252121-33251935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               148
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               97-283
               

               Cow position:
               chr21:27283001-27282815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               64, 153
               

               Conread position:
               98-255
               

               Cow position:
               chr21:2511502-2511344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr21:6340173-6340012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr21:12055394-12055555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr21:11506203-11506034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr21:37371852-37371683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-267
               

               Cow position:
               chr21:2475934-2476105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-267
               

               Cow position:
               chr21:4091255-4091085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               63, 117
               

               Conread position:
               98-268
               

               Cow position:
               chr21:11406389-11406560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr21:11453049-11453220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr21:26650648-26650477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr21:37046227-37046056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               100-369
               

               Cow position:
               chr21:23603156-23602883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               185, 58
               

               Conread position:
               101-267
               

               Cow position:
               chr21:46916191-46916024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               60, 147
               

               Conread position:
               104-318
               

               Cow position:
               chr21:21915294-21915075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               104-405
               

               Cow position:
               chr21:6110168-6109862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               29, 232
               

               Conread position:
               115-348
               

               Cow position:
               chr21:27565991-27565749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               46, 59
               

               Conread position:
               127-275
               

               Cow position:
               chr21:2502475-2502326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               130-386
               

               Cow position:
               chr21:37324624-37324864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               41, 28
               

               Conread position:
               141-254
               

               Cow position:
               chr21:35596996-35596882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               147-275
               

               Cow position:
               chr21:34293581-34293451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               213-399
               

               Cow position:
               chr21:4184331-4184141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               59, 165
               

               Conread position:
               64-378
               

               Cow position:
               chr22:8876071-8875768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               94, 25
               

               Conread position:
               91-386
               

               Cow position:
               chr22:11032196-11031902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               49, 23
               

               Conread position:
               93-253
               

               Cow position:
               chr22:12731230-12731391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-256
               

               Cow position:
               chr22:8739774-8739942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-266
               

               Cow position:
               chr22:31313785-31313612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               143
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-266
               

               Cow position:
               chr22:31334592-31334765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               65, 157
               

               Conread position:
               93-266
               

               Cow position:
               chr22:44490324-44490150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               93-268
               

               Cow position:
               chr22:560259-560434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr22:17328294-17328468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr22:18815940-18816115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr22:19143246-19143428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-268
               

               Cow position:
               chr22:34168776-34168602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               146
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               93-268
               

               Cow position:
               chr22:36861088-36861259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               93-268
               

               Cow position:
               chr22:42991617-42991443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               74, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr22:44396888-44396713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr22:44934422-44934250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               68, 149
               

               Conread position:
               93-270
               

               Cow position:
               chr22:15313510-15313682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               65, 105
               

               Conread position:
               93-274
               

               Cow position:
               chr22:326728-326907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               66, 45
               

               Conread position:
               93-275
               

               Cow position:
               chr22:525249-525430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               150
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               65, 153
               

               Conread position:
               93-275
               

               Cow position:
               chr22:13773338-13773157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               25, 37
               

               Conread position:
               93-275
               

               Cow position:
               chr22:36184195-36184019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr22:46630603-46630787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               93-277
               

               Cow position:
               chr22:15851760-15851575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               93-279
               

               Cow position:
               chr22:5308546-5308358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-283
               

               Cow position:
               chr22:39469077-39469266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               68, 148
               

               Conread position:
               93-297
               

               Cow position:
               chr22:34599849-34599645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               44, 76
               

               Conread position:
               93-300
               

               Cow position:
               chr22:44352536-44352735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               93-387
               

               Cow position:
               chr22:37132865-37132577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               221
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               65, 45
               

               Conread position:
               93-399
               

               Cow position:
               chr22:1322568-1322264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 178
               

               Conread position:
               93-399
               

               Cow position:
               chr22:3305956-3306265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 189
               

               Conread position:
               93-399
               

               Cow position:
               chr22:13918274-13917971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 240
               

               Conread position:
               93-399
               

               Cow position:
               chr22:35906949-35907260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 287
               

               Conread position:
               93-403
               

               Cow position:
               chr22:6502691-6503016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 65
               

               Conread position:
               93-403
               

               Cow position:
               chr22:23854100-23853793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 18
               

               Conread position:
               98-245
               

               Cow position:
               chr22:6021097-6020949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-245
               

               Cow position:
               chr22:20240410-20240556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               63, 28
               

               Conread position:
               98-256
               

               Cow position:
               chr22:5232848-5233007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr22:3277922-3278083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr22:10909401-10909560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr22:27284465-27284304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               63, 40
               

               Conread position:
               98-265
               

               Cow position:
               chr22:46581154-46581322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr22:1879226-1879058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr22:18027713-18027544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr22:27309343-27309508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               63, 103
               

               Conread position:
               98-268
               

               Cow position:
               chr22:16814320-16814149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-269
               

               Cow position:
               chr22:44369192-44369363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               62, 75
               

               Conread position:
               101-250
               

               Cow position:
               chr22:5932393-5932549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               101-266
               

               Cow position:
               chr22:694054-693888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               101-266
               

               Cow position:
               chr22:35671925-35672091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               102-266
               

               Cow position:
               chr22:537529-537366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               59, 24
               

               Conread position:
               102-266
               

               Cow position:
               chr22:24950526-24950361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               102-267
               

               Cow position:
               chr22:48004969-48004804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               59, 23
               

               Conread position:
               103-414
               

               Cow position:
               chr22:1269358-1269670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 192
               

               Conread position:
               108-270
               

               Cow position:
               chr22:1522441-1522278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               109-263
               

               Cow position:
               chr22:1520585-1520740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               138-399
               

               Cow position:
               chr22:44610296-44610044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               180, 20
               

               Conread position:
               141-265
               

               Cow position:
               chr22:117444-117570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               141-275
               

               Cow position:
               chr22:36533342-36533478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               142-275
               

               Cow position:
               chr22:1861136-1861002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               142-275
               

               Cow position:
               chr22:42771850-42771718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               109, 20
               

               Conread position:
               142-383
               

               Cow position:
               chr22:46522130-46522381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               63, 19
               

               Conread position:
               161-275
               

               Cow position:
               chr22:46547285-46547401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               162-275
               

               Cow position:
               chr22:46853718-46853605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               164-397
               

               Cow position:
               chr22:1282947-1283188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               128, 62
               

               Conread position:
               191-397
               

               Cow position:
               chr22:41419031-41419234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               81, 54
               

               Conread position:
               93-209
               

               Cow position:
               chr23:2794791-2794907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               62, 82
               

               Conread position:
               93-214
               

               Cow position:
               chr23:1024580-1024700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-215
               

               Cow position:
               chr23:4817461-4817338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-267
               

               Cow position:
               chr23:966896-967078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               62, 165
               

               Conread position:
               93-267
               

               Cow position:
               chr23:15177516-15177342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               65, 105
               

               Conread position:
               93-267
               

               Cow position:
               chr23:19489987-19489814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-267
               

               Cow position:
               chr23:28913838-28913665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               141
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               93-267
               

               Cow position:
               chr23:36030932-36031105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               145
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               141, 65
               

               Conread position:
               93-268
               

               Cow position:
               chr23:2758040-2757865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr23:4640184-4640353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               144
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-268
               

               Cow position:
               chr23:14965306-14965481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               65, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr23:15526057-15525881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               50, 77
               

               Conread position:
               93-269
               

               Cow position:
               chr23:4434898-4434721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-269
               

               Cow position:
               chr23:14974112-14974295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               93-270
               

               Cow position:
               chr23:16616400-16616579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-271
               

               Cow position:
               chr23:2716834-2716658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               65, 119
               

               Conread position:
               93-275
               

               Cow position:
               chr23:2026673-2026856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               145
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr23:2781768-2781951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr23:4510521-4510340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               66, 26
               

               Conread position:
               93-275
               

               Cow position:
               chr23:22146808-22146991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr23:29451877-29452055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               62, 43
               

               Conread position:
               93-275
               

               Cow position:
               chr23:31594805-31594985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               65, 113
               

               Conread position:
               93-276
               

               Cow position:
               chr23:27399945-27399765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               65, 114
               

               Conread position:
               93-279
               

               Cow position:
               chr23:15219458-15219637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-285
               

               Cow position:
               chr23:4889118-4888926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               65, 157
               

               Conread position:
               93-287
               

               Cow position:
               chr23:3014839-3014642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-293
               

               Cow position:
               chr23:5874201-5874392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               65, 105
               

               Conread position:
               93-294
               

               Cow position:
               chr23:25683594-25683797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               161
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               93-368
               

               Cow position:
               chr23:9546025-9545743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               206
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               65, 101
               

               Conread position:
               93-369
               

               Cow position:
               chr23:15877324-15877599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               65, 49
               

               Conread position:
               93-382
               

               Cow position:
               chr23:2341533-2341240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               65, 85
               

               Conread position:
               93-395
               

               Cow position:
               chr23:16614993-16615297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               220
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               65, 85
               

               Conread position:
               93-422
               

               Cow position:
               chr23:1402051-1402379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               50, 32
               

               Conread position:
               96-268
               

               Cow position:
               chr23:11778931-11778759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               141
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               65, 154
               

               Conread position:
               96-315
               

               Cow position:
               chr23:20155773-20155991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               65, 154
               

               Conread position:
               98-245
               

               Cow position:
               chr23:19950153-19950300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               63, 118
               

               Conread position:
               98-253
               

               Cow position:
               chr23:4360263-4360106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-255
               

               Cow position:
               chr23:20302645-20302487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr23:28217724-28217563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-267
               

               Cow position:
               chr23:23830394-23830229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               162, 60
               

               Conread position:
               98-268
               

               Cow position:
               chr23:17785888-17786059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr23:31447249-31447078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               101-275
               

               Cow position:
               chr23:2574972-2574798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               60, 152
               

               Conread position:
               125-268
               

               Cow position:
               chr23:30635888-30636030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               36, 13
               

               Conread position:
               127-397
               

               Cow position:
               chr23:22874916-22875169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               31, 62
               

               Conread position:
               129-387
               

               Cow position:
               chr23:7046249-7046512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               33, 194
               

               Conread position:
               157-275
               

               Cow position:
               chr23:988265-988385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               160-275
               

               Cow position:
               chr23:12887533-12887650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               90-460
               

               Cow position:
               chr24:13302005-13302398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 154
               

               Conread position:
               93-217
               

               Cow position:
               chr24:6659970-6660095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-224
               

               Cow position:
               chr24:12796683-12796815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-245
               

               Cow position:
               chr24:30900606-30900750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               93-254
               

               Cow position:
               chr24:14390029-14390190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               93-267
               

               Cow position:
               chr24:148083-148261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               38, 161
               

               Conread position:
               93-267
               

               Cow position:
               chr24:12086731-12086556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-268
               

               Cow position:
               chr24:12335244-12335418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               68, 149
               

               Conread position:
               93-268
               

               Cow position:
               chr24:17696446-17696621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr24:22971618-22971447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               62, 105
               

               Conread position:
               93-268
               

               Cow position:
               chr24:29187815-29187640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-274
               

               Cow position:
               chr24:4414998-4415180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               148
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               68, 158
               

               Conread position:
               93-275
               

               Cow position:
               chr24:12130444-12130625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               149
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               65, 97
               

               Conread position:
               93-275
               

               Cow position:
               chr24:33933898-33933715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-334
               

               Cow position:
               chr24:12237768-12237519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               49, 160
               

               Conread position:
               93-367
               

               Cow position:
               chr24:19833917-19833654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 149
               

               Conread position:
               93-381
               

               Cow position:
               chr24:6669619-6669914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               62, 26
               

               Conread position:
               93-394
               

               Cow position:
               chr24:38638073-38637762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               65, 160
               

               Conread position:
               93-399
               

               Cow position:
               chr24:6336382-6336065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 134
               

               Conread position:
               93-403
               

               Cow position:
               chr24:36559230-36559551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 153
               

               Conread position:
               93-459
               

               Cow position:
               chr24:14333995-14333638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 66
               

               Conread position:
               96-246
               

               Cow position:
               chr24:6024583-6024732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               65, 74
               

               Conread position:
               98-225
               

               Cow position:
               chr24:6084591-6084463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-238
               

               Cow position:
               chr24:7061914-7061772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-241
               

               Cow position:
               chr24:16084135-16084279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-245
               

               Cow position:
               chr24:9188211-9188360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr24:5992707-5992870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr24:6434759-6434597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr24:6646220-6646059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-265
               

               Cow position:
               chr24:33738819-33738988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr24:22793696-22793523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr24:29305803-29305974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr24:43814283-43814115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               63, 28
               

               Conread position:
               98-267
               

               Cow position:
               chr24:40549385-40549223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               63, 34
               

               Conread position:
               98-267
               

               Cow position:
               chr24:44018053-44017883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               101-245
               

               Cow position:
               chr24:8030669-8030523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               101-258
               

               Cow position:
               chr24:13188690-13188532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               101-292
               

               Cow position:
               chr24:37217531-37217347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               60, 19
               

               Conread position:
               102-268
               

               Cow position:
               chr24:12484802-12484968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               59, 127
               

               Conread position:
               102-401
               

               Cow position:
               chr24:16648464-16648770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               32, 81
               

               Conread position:
               102-405
               

               Cow position:
               chr24:17313028-17313325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               59, 19
               

               Conread position:
               103-399
               

               Cow position:
               chr24:36708786-36708472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               66, 287
               

               Conread position:
               104-386
               

               Cow position:
               chr24:16472415-16472125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               32, 148
               

               Conread position:
               105-275
               

               Cow position:
               chr24:9091765-9091936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               51, 83
               

               Conread position:
               109-381
               

               Cow position:
               chr24:32332536-32332258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               49, 142
               

               Conread position:
               110-395
               

               Cow position:
               chr24:12205797-12206083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               167, 48
               

               Conread position:
               114-238
               

               Cow position:
               chr24:1449764-1449638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               118-292
               

               Cow position:
               chr24:12232468-12232644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               127-275
               

               Cow position:
               chr24:12162351-12162204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               34, 82
               

               Conread position:
               148-275
               

               Cow position:
               chr24:35838144-35838273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               93-211
               

               Cow position:
               chr25:22148025-22147907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               68, 30
               

               Conread position:
               93-264
               

               Cow position:
               chr25:26879678-26879504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               65, 119
               

               Conread position:
               93-267
               

               Cow position:
               chr25:12942212-12942386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               146
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr25:18889527-18889702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               147
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               68, 149
               

               Conread position:
               93-268
               

               Cow position:
               chr25:34013998-34014175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               47, 139
               

               Conread position:
               93-268
               

               Cow position:
               chr25:34346530-34346704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               65, 53
               

               Conread position:
               93-274
               

               Cow position:
               chr25:24659740-24659559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               150
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               68, 45
               

               Conread position:
               93-275
               

               Cow position:
               chr25:8675403-8675221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-287
               

               Cow position:
               chr25:17560149-17560340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               68, 169
               

               Conread position:
               93-289
               

               Cow position:
               chr25:18274494-18274692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-350
               

               Cow position:
               chr25:33665193-33665453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 119
               

               Conread position:
               93-423
               

               Cow position:
               chr25:18094686-18094354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 86
               

               Conread position:
               93-431
               

               Cow position:
               chr25:11932614-11932968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 147
               

               Conread position:
               94-268
               

               Cow position:
               chr25:26279733-26279572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               64, 107
               

               Conread position:
               95-266
               

               Cow position:
               chr25:32580443-32580272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-269
               

               Cow position:
               chr25:18303888-18303711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               38, 161
               

               Conread position:
               96-397
               

               Cow position:
               chr25:23344415-23344731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               97-266
               

               Cow position:
               chr25:13781514-13781344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               98-209
               

               Cow position:
               chr25:20775444-20775556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-245
               

               Cow position:
               chr25:19917560-19917412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr25:27022084-27022251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr25:17589077-17589247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr25:18194622-18194791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr25:6172379-6172208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr25:13550554-13550725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-275
               

               Cow position:
               chr25:9544541-9544366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               153, 60
               

               Conread position:
               102-267
               

               Cow position:
               chr25:35361957-35362124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               107-214
               

               Cow position:
               chr25:25507142-25507035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               51, 91
               

               Conread position:
               114-275
               

               Cow position:
               chr25:14016635-14016470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               118-386
               

               Cow position:
               chr25:18422487-18422226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               141, 20
               

               Conread position:
               141-266
               

               Cow position:
               chr25:18027004-18027131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               148-275
               

               Cow position:
               chr25:17468268-17468397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               93-268
               

               Cow position:
               chr26:19351005-19351180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-275
               

               Cow position:
               chr26:6848931-6849111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               150
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               65, 119
               

               Conread position:
               93-285
               

               Cow position:
               chr26:9562850-9563042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               102, 25
               

               Conread position:
               93-393
               

               Cow position:
               chr26:4333795-4334102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 148
               

               Conread position:
               95-245
               

               Cow position:
               chr26:18852720-18852568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               95-245
               

               Cow position:
               chr26:18855589-18855437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               97-275
               

               Cow position:
               chr26:30588868-30589046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               144
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               64, 153
               

               Conread position:
               98-258
               

               Cow position:
               chr26:15144263-15144424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr26:2199123-2198954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr26:8870373-8870210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               63, 36
               

               Conread position:
               98-266
               

               Cow position:
               chr26:30783240-30783071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-267
               

               Cow position:
               chr26:2351865-2352032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               63, 47
               

               Conread position:
               98-267
               

               Cow position:
               chr26:11253560-11253730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               98-267
               

               Cow position:
               chr26:12588068-12588239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-269
               

               Cow position:
               chr26:9113235-9113063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-279
               

               Cow position:
               chr26:3030331-3030512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               63, 163
               

               Conread position:
               101-265
               

               Cow position:
               chr26:4806067-4806233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               102-258
               

               Cow position:
               chr26:8919343-8919186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               118-219
               

               Cow position:
               chr26:9844412-9844514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               129-268
               

               Cow position:
               chr26:17396462-17396597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               141-265
               

               Cow position:
               chr26:23603047-23603174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               144-275
               

               Cow position:
               chr26:12573951-12574083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               180-399
               

               Cow position:
               chr26:20255772-20255556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               77, 131
               

               Conread position:
               214-408
               

               Cow position:
               chr26:9844885-9845076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               70, 46
               

               Conread position:
               238-399
               

               Cow position:
               chr26:12656810-12656645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               84, 140
               

               Conread position:
               68-304
               

               Cow position:
               chr27:16043617-16043854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               137, 16
               

               Conread position:
               89-266
               

               Cow position:
               chr27:28078892-28078719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               69, 49
               

               Conread position:
               93-200
               

               Cow position:
               chr27:26325512-26325404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-214
               

               Cow position:
               chr27:15037146-15037268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               93-214
               

               Cow position:
               chr27:15046613-15046493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               93-214
               

               Cow position:
               chr27:27663387-27663265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               93-268
               

               Cow position:
               chr27:9330167-9329995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               63, 149
               

               Conread position:
               93-268
               

               Cow position:
               chr27:15637925-15638099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               93-268
               

               Cow position:
               chr27:23335609-23335434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-275
               

               Cow position:
               chr27:5911307-5911126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               65, 148
               

               Conread position:
               93-275
               

               Cow position:
               chr27:9992757-9992940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               150
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               68, 148
               

               Conread position:
               93-275
               

               Cow position:
               chr27:14460011-14460193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               149
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-285
               

               Cow position:
               chr27:893653-893460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               154
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-285
               

               Cow position:
               chr27:1209797-1209604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               153
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-368
               

               Cow position:
               chr27:25804464-25804735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               194, 65
               

               Conread position:
               93-397
               

               Cow position:
               chr27:26555221-26555523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 113
               

               Conread position:
               96-275
               

               Cow position:
               chr27:15277626-15277810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               149
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr27:16033960-16034129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr27:27752762-27752931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-269
               

               Cow position:
               chr27:15541763-15541592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               63, 163
               

               Conread position:
               102-200
               

               Cow position:
               chr27:28080733-28080635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               56, 36
               

               Conread position:
               107-348
               

               Cow position:
               chr27:8568152-8567902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               48, 143
               

               Conread position:
               163-275
               

               Cow position:
               chr27:25002158-25002272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               91-395
               

               Cow position:
               chr28:10617339-10617638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 96
               

               Conread position:
               92-381
               

               Cow position:
               chr28:10229729-10230021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               66, 206
               

               Conread position:
               93-220
               

               Cow position:
               chr28:8720808-8720937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-266
               

               Cow position:
               chr28:5937969-5937793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               28, 18
               

               Conread position:
               93-267
               

               Cow position:
               chr28:14705181-14705355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               144
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               70, 157
               

               Conread position:
               93-267
               

               Cow position:
               chr28:22260661-22260835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               148
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 149
               

               Conread position:
               93-268
               

               Cow position:
               chr28:1167392-1167566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               149
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 149
               

               Conread position:
               93-268
               

               Cow position:
               chr28:2084082-2083909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               146
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-268
               

               Cow position:
               chr28:5566639-5566460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               32, 161
               

               Conread position:
               93-268
               

               Cow position:
               chr28:5751215-5751390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr28:10581495-10581669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               68, 149
               

               Conread position:
               93-268
               

               Cow position:
               chr28:12409738-12409913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr28:13460459-13460285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               147
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               93-268
               

               Cow position:
               chr28:17666809-17666982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               68, 29
               

               Conread position:
               93-268
               

               Cow position:
               chr28:26425761-26425936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr28:29820224-29820049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr28:32791886-32792065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               38, 161
               

               Conread position:
               93-268
               

               Cow position:
               chr28:34594468-34594294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               143
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               93-269
               

               Cow position:
               chr28:17388972-17388797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               68, 29
               

               Conread position:
               93-270
               

               Cow position:
               chr28:1386915-1387091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               68, 45
               

               Conread position:
               93-275
               

               Cow position:
               chr28:7002479-7002297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               151
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               68, 45
               

               Conread position:
               93-275
               

               Cow position:
               chr28:18519958-18520152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               68, 14
               

               Conread position:
               93-283
               

               Cow position:
               chr28:1505355-1505165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               153
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-335
               

               Cow position:
               chr28:3020260-3020495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 178
               

               Conread position:
               93-344
               

               Cow position:
               chr28:10071772-10071521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 65
               

               Conread position:
               93-403
               

               Cow position:
               chr28:10497527-10497840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 49
               

               Conread position:
               93-409
               

               Cow position:
               chr28:5813499-5813180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 210
               

               Conread position:
               93-454
               

               Cow position:
               chr28:7789463-7789823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 65
               

               Conread position:
               95-266
               

               Cow position:
               chr28:485081-485253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               96-266
               

               Cow position:
               chr28:7822738-7822567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               96-268
               

               Cow position:
               chr28:782880-782710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               65, 133
               

               Conread position:
               96-268
               

               Cow position:
               chr28:5113811-5113983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               142
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               60, 154
               

               Conread position:
               96-275
               

               Cow position:
               chr28:12150790-12150611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               65, 154
               

               Conread position:
               96-283
               

               Cow position:
               chr28:1814382-1814566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               152
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               62, 41
               

               Conread position:
               96-283
               

               Cow position:
               chr28:7740966-7740782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               62, 140
               

               Conread position:
               96-388
               

               Cow position:
               chr28:2988756-2989048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 62
               

               Conread position:
               96-399
               

               Cow position:
               chr28:5798231-5797939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               227
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               16, 41
               

               Conread position:
               98-218
               

               Cow position:
               chr28:24588570-24588447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               98-218
               

               Cow position:
               chr28:24589332-24589209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               98-243
               

               Cow position:
               chr28:2724444-2724590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-245
               

               Cow position:
               chr28:6538783-6538931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr28:14751024-14750864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               63, 76
               

               Conread position:
               98-266
               

               Cow position:
               chr28:1953608-1953439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr28:6779858-6780024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               63, 131
               

               Conread position:
               98-266
               

               Cow position:
               chr28:22232921-22233090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               106-246
               

               Cow position:
               chr28:24668085-24667946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               111-397
               

               Cow position:
               chr28:21359810-21359515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 165
               

               Conread position:
               121-268
               

               Cow position:
               chr28:33252774-33252627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               40, 129
               

               Conread position:
               123-268
               

               Cow position:
               chr28:30805234-30805380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               126-231
               

               Cow position:
               chr28:3191791-3191895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               138-355
               

               Cow position:
               chr28:2886754-2886542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               202, 23
               

               Conread position:
               141-275
               

               Cow position:
               chr28:9954571-9954440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               115, 17
               

               Conread position:
               142-275
               

               Cow position:
               chr28:7901804-7901669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               153-397
               

               Cow position:
               chr28:29092137-29092390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               93, 97
               

               Conread position:
               161-266
               

               Cow position:
               chr28:9136629-9136735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               177-369
               

               Cow position:
               chr28:8720946-8721143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               115, 42
               

               Conread position:
               192-369
               

               Cow position:
               chr28:14947026-14946847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               78, 88
               

               Conread position:
               231-405
               

               Cow position:
               chr28:7817817-7817649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               91, 58
               

               Conread position:
               91-327
               

               Cow position:
               chr29:5982260-5982485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               67, 116
               

               Conread position:
               92-275
               

               Cow position:
               chr29:26164366-26164549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               148
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               69, 158
               

               Conread position:
               93-266
               

               Cow position:
               chr29:38227435-38227263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               143
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               93-267
               

               Cow position:
               chr29:9643304-9643477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               141, 65
               

               Conread position:
               93-268
               

               Cow position:
               chr29:48017-48199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               68, 164
               

               Conread position:
               93-268
               

               Cow position:
               chr29:2100301-2100126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               65, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr29:2690356-2690181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr29:10647795-10647970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               65, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr29:14586371-14586203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               65, 123
               

               Conread position:
               93-268
               

               Cow position:
               chr29:16022988-16022811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               29, 159
               

               Conread position:
               93-268
               

               Cow position:
               chr29:19622792-19622966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               65, 136
               

               Conread position:
               93-268
               

               Cow position:
               chr29:19653558-19653389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-268
               

               Cow position:
               chr29:20251614-20251440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               146
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               93-268
               

               Cow position:
               chr29:32540264-32540091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               144
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-268
               

               Cow position:
               chr29:34799354-34799529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr29:43323009-43322835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               93-270
               

               Cow position:
               chr29:25932087-25932267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-270
               

               Cow position:
               chr29:39079256-39079432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               68, 18
               

               Conread position:
               93-270
               

               Cow position:
               chr29:45586912-45587088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-275
               

               Cow position:
               chr29:10823513-10823696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr29:21426574-21426757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               148
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr29:42650722-42650538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr29:42802582-42802398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               93-283
               

               Cow position:
               chr29:7430763-7430952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               155
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-284
               

               Cow position:
               chr29:410070-410259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               153
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               65, 118
               

               Conread position:
               93-285
               

               Cow position:
               chr29:2840921-2841110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               93-315
               

               Cow position:
               chr29:45460171-45459950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               26, 120
               

               Conread position:
               93-339
               

               Cow position:
               chr29:5958055-5957823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               68, 120
               

               Conread position:
               93-399
               

               Cow position:
               chr29:14085679-14085983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 177
               

               Conread position:
               95-291
               

               Cow position:
               chr29:4633943-4634141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               96, 45
               

               Conread position:
               96-268
               

               Cow position:
               chr29:6266047-6266220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               35, 8
               

               Conread position:
               96-268
               

               Cow position:
               chr29:15894404-15894577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               96-268
               

               Cow position:
               chr29:40502531-40502703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               142
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               65, 154
               

               Conread position:
               96-283
               

               Cow position:
               chr29:23976287-23976107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               98-245
               

               Cow position:
               chr29:7844775-7844627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-245
               

               Cow position:
               chr29:16110859-16110712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               63, 72
               

               Conread position:
               98-245
               

               Cow position:
               chr29:18856499-18856648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr29:27980478-27980636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               63, 110
               

               Conread position:
               98-266
               

               Cow position:
               chr29:610169-610337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               63, 23
               

               Conread position:
               98-266
               

               Cow position:
               chr29:669613-669782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr29:19885512-19885345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               63, 42
               

               Conread position:
               98-267
               

               Cow position:
               chr29:13582512-13582343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               62, 163
               

               Conread position:
               98-267
               

               Cow position:
               chr29:27249899-27250069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               63, 75
               

               Conread position:
               98-267
               

               Cow position:
               chr29:34925923-34925752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-269
               

               Cow position:
               chr29:15968417-15968588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               63, 163
               

               Conread position:
               101-246
               

               Cow position:
               chr29:35297311-35297164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               103-397
               

               Cow position:
               chr29:802484-802789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               33, 67
               

               Conread position:
               141-275
               

               Cow position:
               chr29:12795976-12796109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               14, 85
               

               Conread position:
               141-275
               

               Cow position:
               chr29:21542960-21543096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               141-275
               

               Cow position:
               chr29:27040363-27040499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               141-448
               

               Cow position:
               chr29:105434-105124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               20, 111
               

               Conread position:
               148-274
               

               Cow position:
               chr29:16770522-16770396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               10, 38
               

               Conread position:
               148-275
               

               Cow position:
               chr29:34300369-34300496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               148-275
               

               Cow position:
               chr29:35197066-35196937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               177-407
               

               Cow position:
               chr29:9617663-9617425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               84, 21
               

               Conread position:
               90-268
               

               Cow position:
               chr3:10240030-10239852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               147
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               71, 160
               

               Conread position:
               91-454
               

               Cow position:
               chr3:83232864-83233236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               248
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               92-293
               

               Cow position:
               chr3:49678166-49677967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               71, 168
               

               Conread position:
               92-386
               

               Cow position:
               chr3:12679647-12679956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 295
               

               Conread position:
               93-216
               

               Cow position:
               chr3:29579000-29578876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-234
               

               Cow position:
               chr3:74439670-74439528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-265
               

               Cow position:
               chr3:56340053-56340226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-266
               

               Cow position:
               chr3:5883911-5883739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               65, 97
               

               Conread position:
               93-267
               

               Cow position:
               chr3:5995328-5995502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-267
               

               Cow position:
               chr3:72630441-72630269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               145
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               68, 45
               

               Conread position:
               93-268
               

               Cow position:
               chr3:18542034-18542209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr3:18811873-18811699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               65, 131
               

               Conread position:
               93-268
               

               Cow position:
               chr3:19756584-19756760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               48, 150
               

               Conread position:
               93-268
               

               Cow position:
               chr3:21182314-21182488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               68, 134
               

               Conread position:
               93-268
               

               Cow position:
               chr3:30314926-30314766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-268
               

               Cow position:
               chr3:34030525-34030700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               65, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr3:36881545-36881723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               93-268
               

               Cow position:
               chr3:40823760-40823586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               93-268
               

               Cow position:
               chr3:53515979-53515812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               65, 115
               

               Conread position:
               93-269
               

               Cow position:
               chr3:23213704-23213876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               148, 113
               

               Conread position:
               93-269
               

               Cow position:
               chr3:50012043-50011867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               93-269
               

               Cow position:
               chr3:50915699-50915522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr3:594950-594767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               152
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-275
               

               Cow position:
               chr3:5953813-5953995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               152
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-275
               

               Cow position:
               chr3:7480862-7481041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               68, 24
               

               Conread position:
               93-275
               

               Cow position:
               chr3:42432605-42432422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               68, 45
               

               Conread position:
               93-275
               

               Cow position:
               chr3:46502907-46502724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr3:57484358-57484539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               147
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               68, 28
               

               Conread position:
               93-283
               

               Cow position:
               chr3:23289967-23290157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               38, 156
               

               Conread position:
               93-283
               

               Cow position:
               chr3:49137167-49137355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               158
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 17
               

               Conread position:
               93-283
               

               Cow position:
               chr3:75040796-75040985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-292
               

               Cow position:
               chr3:18463200-18463393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               69, 101
               

               Conread position:
               93-296
               

               Cow position:
               chr3:77424178-77423975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               162
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               68, 172
               

               Conread position:
               93-342
               

               Cow position:
               chr3:3982119-3981874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               68, 15
               

               Conread position:
               93-368
               

               Cow position:
               chr3:58947997-58947721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 33
               

               Conread position:
               93-380
               

               Cow position:
               chr3:48230092-48230370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               200, 33
               

               Conread position:
               93-399
               

               Cow position:
               chr3:4028115-4027836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-399
               

               Cow position:
               chr3:52863763-52864074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 274
               

               Conread position:
               93-412
               

               Cow position:
               chr3:64357468-64357789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 159
               

               Conread position:
               93-440
               

               Cow position:
               chr3:15179072-15178730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               240
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               226, 107
               

               Conread position:
               94-245
               

               Cow position:
               chr3:19879023-19878871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               94-327
               

               Cow position:
               chr3:20870356-20870587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               49, 164
               

               Conread position:
               95-277
               

               Cow position:
               chr3:24314832-24314648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               96-275
               

               Cow position:
               chr3:64016999-64017174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               65, 15
               

               Conread position:
               96-283
               

               Cow position:
               chr3:49544841-49545022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               38, 9
               

               Conread position:
               96-288
               

               Cow position:
               chr3:63003178-63003368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               158
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               96, 55
               

               Conread position:
               96-298
               

               Cow position:
               chr3:6878689-6878885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               59, 42
               

               Conread position:
               96-398
               

               Cow position:
               chr3:24590957-24591254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 62
               

               Conread position:
               96-399
               

               Cow position:
               chr3:66991461-66991153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 133
               

               Conread position:
               96-403
               

               Cow position:
               chr3:2907399-2907697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               65, 124
               

               Conread position:
               97-268
               

               Cow position:
               chr3:59861735-59861565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               141
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               64, 132
               

               Conread position:
               97-275
               

               Cow position:
               chr3:45974865-45974688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               97-381
               

               Cow position:
               chr3:32616632-32616927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               29, 94
               

               Conread position:
               98-204
               

               Cow position:
               chr3:7158354-7158461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-209
               

               Cow position:
               chr3:27918797-27918685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-223
               

               Cow position:
               chr3:48842533-48842407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-245
               

               Cow position:
               chr3:20380905-20380757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr3:2917822-2917662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               63, 82
               

               Conread position:
               98-258
               

               Cow position:
               chr3:7169155-7168993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr3:22336250-22336089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr3:32622675-32622836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr3:68873392-68873554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr3:3523383-3523214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr3:6782746-6782577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr3:18859774-18859607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               77, 28
               

               Conread position:
               98-266
               

               Cow position:
               chr3:37969409-37969241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               63, 85
               

               Conread position:
               98-266
               

               Cow position:
               chr3:40339750-40339919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr3:41211373-41211544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr3:46860941-46861110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-267
               

               Cow position:
               chr3:36118024-36117854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-267
               

               Cow position:
               chr3:66890601-66890770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               57, 163
               

               Conread position:
               98-267
               

               Cow position:
               chr3:68699610-68699782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr3:19736942-19736771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr3:64027724-64027895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-283
               

               Cow position:
               chr3:64650988-64650804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               63, 163
               

               Conread position:
               98-285
               

               Cow position:
               chr3:45033102-45032917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               63, 125
               

               Conread position:
               100-266
               

               Cow position:
               chr3:14439401-14439568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               101-226
               

               Cow position:
               chr3:47081052-47081176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               60, 115
               

               Conread position:
               101-258
               

               Cow position:
               chr3:29330912-29331070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               101-266
               

               Cow position:
               chr3:46679790-46679624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               101-268
               

               Cow position:
               chr3:1516514-1516346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               101-268
               

               Cow position:
               chr3:48060465-48060633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               60, 150
               

               Conread position:
               102-258
               

               Cow position:
               chr3:49613618-49613776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               102-399
               

               Cow position:
               chr3:6686172-6685864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 56
               

               Conread position:
               103-234
               

               Cow position:
               chr3:19939236-19939104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               103-384
               

               Cow position:
               chr3:18356140-18356410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               55, 126
               

               Conread position:
               104-254
               

               Cow position:
               chr3:56321660-56321508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               110-291
               

               Cow position:
               chr3:66620529-66620350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               45, 140
               

               Conread position:
               111-268
               

               Cow position:
               chr3:78027055-78027211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               118-275
               

               Cow position:
               chr3:45895210-45895367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               121-315
               

               Cow position:
               chr3:2710599-2710792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               40, 118
               

               Conread position:
               129-267
               

               Cow position:
               chr3:19944381-19944242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               130-399
               

               Cow position:
               chr3:50127370-50127654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               28, 260
               

               Conread position:
               132-265
               

               Cow position:
               chr3:31353929-31354064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               132-275
               

               Cow position:
               chr3:53713380-53713239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               124, 26
               

               Conread position:
               141-299
               

               Cow position:
               chr3:26822183-26822339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               115, 17
               

               Conread position:
               143-284
               

               Cow position:
               chr3:2634249-2634106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               146-285
               

               Cow position:
               chr3:38492960-38492823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               148-275
               

               Cow position:
               chr3:41000428-41000300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               149-266
               

               Cow position:
               chr3:55229383-55229501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               149-284
               

               Cow position:
               chr3:5829308-5829445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               160-265
               

               Cow position:
               chr3:3806634-3806528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               160-266
               

               Cow position:
               chr3:40157204-40157311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               172-395
               

               Cow position:
               chr3:46015934-46015717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               147, 56
               

               Conread position:
               189-397
               

               Cow position:
               chr3:19690866-19691066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               96, 58
               

               Conread position:
               92-265
               

               Cow position:
               chr4:16360061-16359888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               66, 158
               

               Conread position:
               93-198
               

               Cow position:
               chr4:57984159-57984053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               93-214
               

               Cow position:
               chr4:13493489-13493365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               66, 45
               

               Conread position:
               93-223
               

               Cow position:
               chr4:33072649-33072780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-236
               

               Cow position:
               chr4:21256528-21256382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               93-267
               

               Cow position:
               chr4:25599324-25599498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               65, 85
               

               Conread position:
               93-267
               

               Cow position:
               chr4:43881287-43881113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               146
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               70, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr4:6490186-6490361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr4:12587477-12587302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               66, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr4:31669450-31669275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr4:33494003-33493828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr4:43319468-43319643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               70, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr4:44725263-44725087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               145
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               65, 158
               

               Conread position:
               93-268
               

               Cow position:
               chr4:45049120-45049295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-269
               

               Cow position:
               chr4:36896546-36896370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               148
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-275
               

               Cow position:
               chr4:12241039-12241222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               149
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               65, 157
               

               Conread position:
               93-275
               

               Cow position:
               chr4:17926076-17926259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               148
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-275
               

               Cow position:
               chr4:31565127-31565308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               68, 18
               

               Conread position:
               93-275
               

               Cow position:
               chr4:48026575-48026392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               93-283
               

               Cow position:
               chr4:26886683-26886871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               156
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               68, 128
               

               Conread position:
               93-320
               

               Cow position:
               chr4:22472710-22472479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               44, 24
               

               Conread position:
               93-399
               

               Cow position:
               chr4:28831518-28831223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               65, 124
               

               Conread position:
               93-412
               

               Cow position:
               chr4:60263986-60264306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 110
               

               Conread position:
               93-415
               

               Cow position:
               chr4:34184342-34184659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 241
               

               Conread position:
               93-431
               

               Cow position:
               chr4:11385918-11385594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               233
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               65, 121
               

               Conread position:
               94-267
               

               Cow position:
               chr4:13548199-13548025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               67, 32
               

               Conread position:
               94-285
               

               Cow position:
               chr4:4176970-4176779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               28, 68
               

               Conread position:
               96-275
               

               Cow position:
               chr4:18517070-18516892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               62, 8
               

               Conread position:
               97-298
               

               Cow position:
               chr4:12607498-12607688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               64, 25
               

               Conread position:
               98-244
               

               Cow position:
               chr4:16056767-16056621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-246
               

               Cow position:
               chr4:9354609-9354758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr4:100767-100928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr4:5880332-5880171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr4:3125962-3125793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr4:18190572-18190403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-267
               

               Cow position:
               chr4:603161-602989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               98-267
               

               Cow position:
               chr4:32212334-32212165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               63, 163
               

               Conread position:
               98-268
               

               Cow position:
               chr4:65223367-65223538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-269
               

               Cow position:
               chr4:16326608-16326779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               63, 162
               

               Conread position:
               101-265
               

               Cow position:
               chr4:27333598-27333433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               101-266
               

               Cow position:
               chr4:1930461-1930626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               60, 48
               

               Conread position:
               101-266
               

               Cow position:
               chr4:41954637-41954472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               60, 113
               

               Conread position:
               101-266
               

               Cow position:
               chr4:41958292-41958127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               60, 113
               

               Conread position:
               102-266
               

               Cow position:
               chr4:18424362-18424527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               102-267
               

               Cow position:
               chr4:356078-355913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               59, 148
               

               Conread position:
               103-397
               

               Cow position:
               chr4:46664684-46664381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 281
               

               Conread position:
               105-253
               

               Cow position:
               chr4:11111255-11111402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               110-266
               

               Cow position:
               chr4:4416236-4416080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               51, 119
               

               Conread position:
               121-266
               

               Cow position:
               chr4:158659-158513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               138-266
               

               Cow position:
               chr4:41120436-41120309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               7, 83
               

               Conread position:
               141-275
               

               Cow position:
               chr4:47717475-47717611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               160-275
               

               Cow position:
               chr4:66926107-66925991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               23-275
               

               Cow position:
               chr5:32946216-32945964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 24
               

               Conread position:
               90-399
               

               Cow position:
               chr5:41528484-41528795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 187
               

               Conread position:
               91-397
               

               Cow position:
               chr5:39246737-39247026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 175
               

               Conread position:
               93-223
               

               Cow position:
               chr5:48808462-48808591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               65, 114
               

               Conread position:
               93-224
               

               Cow position:
               chr5:4069487-4069355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-224
               

               Cow position:
               chr5:12643453-12643585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-228
               

               Cow position:
               chr5:24098940-24098804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-242
               

               Cow position:
               chr5:5667785-5667937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               65, 47
               

               Conread position:
               93-264
               

               Cow position:
               chr5:31101354-31101526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-266
               

               Cow position:
               chr5:64781745-64781918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-267
               

               Cow position:
               chr5:37732618-37732445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               68, 47
               

               Conread position:
               93-267
               

               Cow position:
               chr5:49119007-49119182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-268
               

               Cow position:
               chr5:2914721-2914546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               68, 156
               

               Conread position:
               93-268
               

               Cow position:
               chr5:3503832-3504006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               65, 150
               

               Conread position:
               93-268
               

               Cow position:
               chr5:7274098-7273926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               25, 89
               

               Conread position:
               93-268
               

               Cow position:
               chr5:30579598-30579420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               38, 113
               

               Conread position:
               93-268
               

               Cow position:
               chr5:54792367-54792537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               65, 105
               

               Conread position:
               93-268
               

               Cow position:
               chr5:55628258-55628084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               68, 56
               

               Conread position:
               93-268
               

               Cow position:
               chr5:57482272-57482448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               37, 68
               

               Conread position:
               93-270
               

               Cow position:
               chr5:6154948-6155124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               146
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               93-275
               

               Cow position:
               chr5:415448-415632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               148
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr5:4385515-4385336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               93-275
               

               Cow position:
               chr5:34696874-34696693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               69, 147
               

               Conread position:
               93-283
               

               Cow position:
               chr5:73489288-73489477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               154
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-289
               

               Cow position:
               chr5:46738306-46738500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               161
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-292
               

               Cow position:
               chr5:10919092-10918894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               65, 121
               

               Conread position:
               93-354
               

               Cow position:
               chr5:61278176-61278440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               65, 45
               

               Conread position:
               93-386
               

               Cow position:
               chr5:35526087-35525784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               65, 122
               

               Conread position:
               94-267
               

               Cow position:
               chr5:4089336-4089161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               94-404
               

               Cow position:
               chr5:27058472-27058767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               225, 43
               

               Conread position:
               96-226
               

               Cow position:
               chr5:3786195-3786064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               96-277
               

               Cow position:
               chr5:26078957-26079140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               96-385
               

               Cow position:
               chr5:41357822-41358103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               65, 42
               

               Conread position:
               98-215
               

               Cow position:
               chr5:35300360-35300242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-245
               

               Cow position:
               chr5:10843158-10843306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-245
               

               Cow position:
               chr5:54931957-54932105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr5:14380404-14380249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr5:18666255-18666094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr5:24577175-24577015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               63, 92
               

               Conread position:
               98-265
               

               Cow position:
               chr5:46776340-46776172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr5:3964711-3964544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr5:4018938-4019106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               63, 40
               

               Conread position:
               98-266
               

               Cow position:
               chr5:10776003-10776172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr5:18122208-18122376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               63, 89
               

               Conread position:
               98-266
               

               Cow position:
               chr5:27909011-27909180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr5:31706835-31706666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr5:46664264-46664095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr5:59060879-59060710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-267
               

               Cow position:
               chr5:6588759-6588928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               63, 163
               

               Conread position:
               98-267
               

               Cow position:
               chr5:48468018-48468189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr5:44459744-44459573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-269
               

               Cow position:
               chr5:10483109-10482938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               63, 163
               

               Conread position:
               98-295
               

               Cow position:
               chr5:18664053-18663854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-333
               

               Cow position:
               chr5:46644944-46644708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               60, 109
               

               Conread position:
               99-258
               

               Cow position:
               chr5:23960055-23960215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               99-397
               

               Cow position:
               chr5:46660298-46660010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               226
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               30, 18
               

               Conread position:
               102-268
               

               Cow position:
               chr5:59482511-59482343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               103-398
               

               Cow position:
               chr5:27002290-27002007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 51
               

               Conread position:
               110-397
               

               Cow position:
               chr5:41961688-41961970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 112
               

               Conread position:
               111-267
               

               Cow position:
               chr5:49518926-49518756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               47, 153
               

               Conread position:
               111-459
               

               Cow position:
               chr5:29435318-29435642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               47, 131
               

               Conread position:
               118-223
               

               Cow position:
               chr5:28010847-28010741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               118-266
               

               Cow position:
               chr5:45700515-45700365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               118-399
               

               Cow position:
               chr5:61272301-61272589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               43, 132
               

               Conread position:
               122-281
               

               Cow position:
               chr5:45181866-45182024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               39, 139
               

               Conread position:
               129-266
               

               Cow position:
               chr5:32772712-32772574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               130-266
               

               Cow position:
               chr5:47830884-47831021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               132-275
               

               Cow position:
               chr5:38842253-38842109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               26, 70
               

               Conread position:
               138-266
               

               Cow position:
               chr5:58196222-58196094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               23, 113
               

               Conread position:
               139-279
               

               Cow position:
               chr5:27651754-27651896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               19, 107
               

               Conread position:
               141-275
               

               Cow position:
               chr5:20971822-20971956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               14, 68
               

               Conread position:
               141-275
               

               Cow position:
               chr5:29009579-29009443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               141-296
               

               Cow position:
               chr5:52805664-52805510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               20, 138
               

               Conread position:
               147-266
               

               Cow position:
               chr5:25206463-25206585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               157-265
               

               Cow position:
               chr5:9686218-9686327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               159-409
               

               Cow position:
               chr5:46629829-46630073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               161-354
               

               Cow position:
               chr5:26068109-26068306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               109, 83
               

               Conread position:
               23-267
               

               Cow position:
               chr6:12092388-12092634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               50, 21
               

               Conread position:
               89-386
               

               Cow position:
               chr6:15477320-15477016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               222
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               69, 15
               

               Conread position:
               90-398
               

               Cow position:
               chr6:8021343-8021024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               71, 161
               

               Conread position:
               93-224
               

               Cow position:
               chr6:40315797-40315666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               68, 47
               

               Conread position:
               93-230
               

               Cow position:
               chr6:27471013-27470874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               93-231
               

               Cow position:
               chr6:14852169-14852308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-243
               

               Cow position:
               chr6:51086354-51086203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-244
               

               Cow position:
               chr6:65914608-65914458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               38, 66
               

               Conread position:
               93-255
               

               Cow position:
               chr6:3889070-3889237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-259
               

               Cow position:
               chr6:28275396-28275225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               38, 162
               

               Conread position:
               93-268
               

               Cow position:
               chr6:5949366-5949539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               147
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               65, 134
               

               Conread position:
               93-268
               

               Cow position:
               chr6:8202151-8201977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               65, 80
               

               Conread position:
               93-268
               

               Cow position:
               chr6:8760890-8761065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr6:24239469-24239305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               65, 110
               

               Conread position:
               93-268
               

               Cow position:
               chr6:27529593-27529767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               65, 128
               

               Conread position:
               93-268
               

               Cow position:
               chr6:30274764-30274939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               68, 156
               

               Conread position:
               93-268
               

               Cow position:
               chr6:34892591-34892766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               147
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr6:39437961-39437787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               93-268
               

               Cow position:
               chr6:47042784-47042959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr6:65881320-65881143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-269
               

               Cow position:
               chr6:36526463-36526287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               65, 157
               

               Conread position:
               93-269
               

               Cow position:
               chr6:55543911-55544088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               152
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 158
               

               Conread position:
               93-270
               

               Cow position:
               chr6:25214669-25214490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               70, 149
               

               Conread position:
               93-274
               

               Cow position:
               chr6:64715644-64715462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr6:3277539-3277718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr6:30479518-30479331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr6:35876301-35876486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr6:52693438-52693255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               147
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr6:58027162-58026985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               68, 41
               

               Conread position:
               93-276
               

               Cow position:
               chr6:17046468-17046285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               150
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-283
               

               Cow position:
               chr6:15140771-15140954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               68, 28
               

               Conread position:
               93-283
               

               Cow position:
               chr6:15280143-15280326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               68, 28
               

               Conread position:
               93-285
               

               Cow position:
               chr6:29311906-29311713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-291
               

               Cow position:
               chr6:65928378-65928179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               154
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-293
               

               Cow position:
               chr6:65842000-65841806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               160
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-311
               

               Cow position:
               chr6:43607289-43607500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               35, 138
               

               Conread position:
               93-328
               

               Cow position:
               chr6:20560698-20560931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               70, 136
               

               Conread position:
               93-358
               

               Cow position:
               chr6:38900753-38901028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               39, 220
               

               Conread position:
               93-388
               

               Cow position:
               chr6:1822219-1822509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               65, 84
               

               Conread position:
               93-458
               

               Cow position:
               chr6:7178866-7179223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 106
               

               Conread position:
               93-459
               

               Cow position:
               chr6:10643961-10643592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               94-258
               

               Cow position:
               chr6:28491107-28491272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               95-244
               

               Cow position:
               chr6:40275494-40275344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               95-258
               

               Cow position:
               chr6:58408506-58408670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               96-222
               

               Cow position:
               chr6:25794179-25794053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               65, 29
               

               Conread position:
               96-270
               

               Cow position:
               chr6:4508014-4508189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               97-318
               

               Cow position:
               chr6:44550681-44550912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               98-204
               

               Cow position:
               chr6:26670464-26670571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-243
               

               Cow position:
               chr6:28105447-28105590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               63, 16
               

               Conread position:
               98-245
               

               Cow position:
               chr6:1411540-1411685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               63, 109
               

               Conread position:
               98-245
               

               Cow position:
               chr6:13847429-13847280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr6:2375104-2374942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr6:27169984-27169823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr6:40252064-40251905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               63, 103
               

               Conread position:
               98-266
               

               Cow position:
               chr6:13104460-13104292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               63, 24
               

               Conread position:
               98-266
               

               Cow position:
               chr6:17597887-17598045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr6:39908930-39908761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr6:43618118-43617949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr6:24322978-24323149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr6:69221807-69221978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-269
               

               Cow position:
               chr6:10499321-10499492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               63, 163
               

               Conread position:
               98-270
               

               Cow position:
               chr6:331063-331236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               101-265
               

               Cow position:
               chr6:65821720-65821892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               101-266
               

               Cow position:
               chr6:13944307-13944141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               101-266
               

               Cow position:
               chr6:44150156-44150322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               101-267
               

               Cow position:
               chr6:40867154-40867321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               10, 150
               

               Conread position:
               101-275
               

               Cow position:
               chr6:6567013-6566837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               102-266
               

               Cow position:
               chr6:28063735-28063570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               102-266
               

               Cow position:
               chr6:68027189-68027026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               102-403
               

               Cow position:
               chr6:35419453-35419723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               54, 39
               

               Conread position:
               103-244
               

               Cow position:
               chr6:16052277-16052135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               108-255
               

               Cow position:
               chr6:26044922-26044767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               111-459
               

               Cow position:
               chr6:6475762-6476112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 47
               

               Conread position:
               121-268
               

               Cow position:
               chr6:702337-702190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               40, 129
               

               Conread position:
               131-275
               

               Cow position:
               chr6:914030-913885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               141-266
               

               Cow position:
               chr6:65008052-65007927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               115, 17
               

               Conread position:
               141-275
               

               Cow position:
               chr6:19454283-19454147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               146-293
               

               Cow position:
               chr6:40554219-40554365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               15, 104
               

               Conread position:
               148-275
               

               Cow position:
               chr6:33389203-33389074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               148-276
               

               Cow position:
               chr6:42927697-42927567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               149-266
               

               Cow position:
               chr6:59918926-59919044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               176-449
               

               Cow position:
               chr6:42616792-42616507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               106, 22
               

               Conread position:
               202-300
               

               Cow position:
               chr6:38232900-38232803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               52-399
               

               Cow position:
               chr7:39107374-39107731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 21
               

               Conread position:
               91-400
               

               Cow position:
               chr7:51014775-51014460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 110
               

               Conread position:
               92-286
               

               Cow position:
               chr7:8144739-8144933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               158
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               69, 137
               

               Conread position:
               92-292
               

               Cow position:
               chr7:26852171-26851967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               14, 121
               

               Conread position:
               92-368
               

               Cow position:
               chr7:63950919-63951194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               40, 31
               

               Conread position:
               93-214
               

               Cow position:
               chr7:525476-525353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               93-224
               

               Cow position:
               chr7:53991700-53991573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               65, 45
               

               Conread position:
               93-225
               

               Cow position:
               chr7:64241288-64241419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               65, 71
               

               Conread position:
               93-241
               

               Cow position:
               chr7:54195289-54195428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               11, 46
               

               Conread position:
               93-245
               

               Cow position:
               chr7:38536902-38536749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-266
               

               Cow position:
               chr7:39792262-39792087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               29, 139
               

               Conread position:
               93-267
               

               Cow position:
               chr7:446129-446300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-267
               

               Cow position:
               chr7:10430920-10431087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               93-267
               

               Cow position:
               chr7:19924320-19924496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               34, 151
               

               Conread position:
               93-267
               

               Cow position:
               chr7:21985906-21985730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               65, 159
               

               Conread position:
               93-267
               

               Cow position:
               chr7:25250604-25250430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               41, 157
               

               Conread position:
               93-267
               

               Cow position:
               chr7:34486419-34486245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               62, 157
               

               Conread position:
               93-267
               

               Cow position:
               chr7:46901577-46901750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               65, 34
               

               Conread position:
               93-268
               

               Cow position:
               chr7:1372143-1372322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               65, 161
               

               Conread position:
               93-268
               

               Cow position:
               chr7:13537081-13537254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               65, 8
               

               Conread position:
               93-268
               

               Cow position:
               chr7:14139096-14139271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               146
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               70, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr7:21234507-21234682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               68, 146
               

               Conread position:
               93-268
               

               Cow position:
               chr7:34149603-34149428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               146
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr7:45948648-45948822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               68, 8
               

               Conread position:
               93-270
               

               Cow position:
               chr7:33405737-33405916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               147
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               66, 157
               

               Conread position:
               93-270
               

               Cow position:
               chr7:55537418-55537592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               146
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr7:5183910-5183727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr7:5662873-5662695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               62, 71
               

               Conread position:
               93-275
               

               Cow position:
               chr7:21929645-21929464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               152
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               68, 96
               

               Conread position:
               93-275
               

               Cow position:
               chr7:24807953-24808143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               62, 165
               

               Conread position:
               93-275
               

               Cow position:
               chr7:27787135-27786942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               93-276
               

               Cow position:
               chr7:54603355-54603173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               65, 48
               

               Conread position:
               93-315
               

               Cow position:
               chr7:21127160-21127380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               190, 65
               

               Conread position:
               93-342
               

               Cow position:
               chr7:29470960-29470718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               191
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               62, 25
               

               Conread position:
               93-346
               

               Cow position:
               chr7:1404104-1404356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               62, 48
               

               Conread position:
               93-350
               

               Cow position:
               chr7:21310987-21310741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               229, 6
               

               Conread position:
               93-399
               

               Cow position:
               chr7:29369793-29370075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               221, 58
               

               Conread position:
               93-402
               

               Cow position:
               chr7:68908821-68908509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 138
               

               Conread position:
               93-406
               

               Cow position:
               chr7:48634937-48634623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 92
               

               Conread position:
               93-417
               

               Cow position:
               chr7:4415878-4415544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 7
               

               Conread position:
               94-310
               

               Cow position:
               chr7:12493494-12493715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               48, 30
               

               Conread position:
               95-257
               

               Cow position:
               chr7:1450872-1450715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               66, 135
               

               Conread position:
               95-258
               

               Cow position:
               chr7:3300660-3300824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               96-267
               

               Cow position:
               chr7:68232437-68232268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               65, 8
               

               Conread position:
               96-350
               

               Cow position:
               chr7:23837066-23836806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               60, 145
               

               Conread position:
               96-387
               

               Cow position:
               chr7:20821208-20820924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               60, 116
               

               Conread position:
               96-399
               

               Cow position:
               chr7:58994091-58993781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               226
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               59, 18
               

               Conread position:
               98-200
               

               Cow position:
               chr7:11466277-11466381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-222
               

               Cow position:
               chr7:60794809-60794934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-244
               

               Cow position:
               chr7:3234190-3234337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-245
               

               Cow position:
               chr7:61808725-61808577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr7:20515279-20515440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr7:6648163-6648332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr7:20798953-20799122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr7:43830532-43830703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr7:61559706-61559535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-269
               

               Cow position:
               chr7:16379-16550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               63, 163
               

               Conread position:
               98-269
               

               Cow position:
               chr7:21320649-21320478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               63, 163
               

               Conread position:
               98-275
               

               Cow position:
               chr7:67799350-67799173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               145
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               63, 152
               

               Conread position:
               99-234
               

               Cow position:
               chr7:995016-994879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               101-246
               

               Cow position:
               chr7:59679343-59679200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               74, 56
               

               Conread position:
               101-266
               

               Cow position:
               chr7:11447047-11446880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               101-266
               

               Cow position:
               chr7:25440000-25439834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               101-268
               

               Cow position:
               chr7:60463639-60463471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               102-284
               

               Cow position:
               chr7:24057927-24057749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               132, 9
               

               Conread position:
               102-386
               

               Cow position:
               chr7:58377271-58377562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               59, 38
               

               Conread position:
               104-368
               

               Cow position:
               chr7:59683764-59683503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               54, 34
               

               Conread position:
               107-245
               

               Cow position:
               chr7:6642395-6642532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               54, 14
               

               Conread position:
               110-387
               

               Cow position:
               chr7:55279857-55280124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               203
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               48, 162
               

               Conread position:
               114-397
               

               Cow position:
               chr7:1734307-1734598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               222
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               42, 5
               

               Conread position:
               118-423
               

               Cow position:
               chr7:54644036-54644340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 135
               

               Conread position:
               141-266
               

               Cow position:
               chr7:35296814-35296939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 7
               

               Conread position:
               141-275
               

               Cow position:
               chr7:1610754-1610889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               148-275
               

               Cow position:
               chr7:21975296-21975425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               160-339
               

               Cow position:
               chr7:26894212-26894036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               98, 119
               

               Conread position:
               162-460
               

               Cow position:
               chr7:3155551-3155250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               115, 97
               

               Conread position:
               185-292
               

               Cow position:
               chr7:9138857-9138750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               202-399
               

               Cow position:
               chr7:67426734-67426536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               36, 161
               

               Conread position:
               207-411
               

               Cow position:
               chr7:6488079-6488279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               111, 70
               

               Conread position:
               92-214
               

               Cow position:
               chr8:50288235-50288357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               66, 46
               

               Conread position:
               92-283
               

               Cow position:
               chr8:49215127-49214930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               69, 165
               

               Conread position:
               93-214
               

               Cow position:
               chr8:14928193-14928315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-224
               

               Cow position:
               chr8:44694503-44694371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-227
               

               Cow position:
               chr8:50930439-50930574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-265
               

               Cow position:
               chr8:11802511-11802339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               68, 40
               

               Conread position:
               93-266
               

               Cow position:
               chr8:47661633-47661806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               144
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-267
               

               Cow position:
               chr8:25523097-25522917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               38, 163
               

               Conread position:
               93-267
               

               Cow position:
               chr8:50994477-50994303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               65, 158
               

               Conread position:
               93-267
               

               Cow position:
               chr8:51667603-51667778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-268
               

               Cow position:
               chr8:5016873-5016698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr8:11832390-11832214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               49, 158
               

               Conread position:
               93-268
               

               Cow position:
               chr8:14591213-14591385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               66, 37
               

               Conread position:
               93-268
               

               Cow position:
               chr8:23771326-23771152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               68, 149
               

               Conread position:
               93-268
               

               Cow position:
               chr8:25408416-25408241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               50, 135
               

               Conread position:
               93-268
               

               Cow position:
               chr8:32318865-32319032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               93-268
               

               Cow position:
               chr8:33589066-33588891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr8:38391057-38390885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               68, 36
               

               Conread position:
               93-268
               

               Cow position:
               chr8:39195523-39195700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               34, 159
               

               Conread position:
               93-268
               

               Cow position:
               chr8:42484604-42484429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-270
               

               Cow position:
               chr8:11822004-11821825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-270
               

               Cow position:
               chr8:24915650-24915824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               146
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               68, 155
               

               Conread position:
               93-270
               

               Cow position:
               chr8:60061068-60060895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr8:2170686-2170870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr8:8229089-8229272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr8:10742939-10743121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               68, 148
               

               Conread position:
               93-275
               

               Cow position:
               chr8:44243882-44244064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               68, 149
               

               Conread position:
               93-275
               

               Cow position:
               chr8:46944222-46944410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               93-276
               

               Cow position:
               chr8:12449639-12449455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-276
               

               Cow position:
               chr8:17311711-17311527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               68, 148
               

               Conread position:
               93-283
               

               Cow position:
               chr8:19051168-19050979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               68, 149
               

               Conread position:
               93-283
               

               Cow position:
               chr8:19330427-19330239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               62, 157
               

               Conread position:
               93-287
               

               Cow position:
               chr8:4687087-4686894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               156
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               68, 148
               

               Conread position:
               93-299
               

               Cow position:
               chr8:42419745-42419952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               160
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               65, 120
               

               Conread position:
               93-300
               

               Cow position:
               chr8:45160382-45160590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               38, 158
               

               Conread position:
               93-324
               

               Cow position:
               chr8:3856323-3856557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-387
               

               Cow position:
               chr8:47081544-47081237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               45, 107
               

               Conread position:
               93-397
               

               Cow position:
               chr8:42160726-42161030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 75
               

               Conread position:
               93-399
               

               Cow position:
               chr8:11969592-11969892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 64
               

               Conread position:
               93-399
               

               Cow position:
               chr8:38606506-38606819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               93-399
               

               Cow position:
               chr8:58186526-58186819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 58
               

               Conread position:
               93-401
               

               Cow position:
               chr8:61034327-61034641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 115
               

               Conread position:
               93-426
               

               Cow position:
               chr8:47673843-47673517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               232
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               69, 83
               

               Conread position:
               93-459
               

               Cow position:
               chr8:24419515-24419879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 171
               

               Conread position:
               94-266
               

               Cow position:
               chr8:9735931-9735758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               95-245
               

               Cow position:
               chr8:8556464-8556616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               95-267
               

               Cow position:
               chr8:37931774-37931600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               95-268
               

               Cow position:
               chr8:47885711-47885538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               66, 85
               

               Conread position:
               96-213
               

               Cow position:
               chr8:8401427-8401545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               96-243
               

               Cow position:
               chr8:30487697-30487849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               96-268
               

               Cow position:
               chr8:36635856-36636027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               62, 131
               

               Conread position:
               96-269
               

               Cow position:
               chr8:1348548-1348726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               36, 11
               

               Conread position:
               96-285
               

               Cow position:
               chr8:25775982-25776174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               24, 148
               

               Conread position:
               96-292
               

               Cow position:
               chr8:7161580-7161384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               159
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               65, 133
               

               Conread position:
               96-297
               

               Cow position:
               chr8:12717651-12717449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               62, 21
               

               Conread position:
               97-293
               

               Cow position:
               chr8:8911193-8910999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               158
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               62, 124
               

               Conread position:
               97-396
               

               Cow position:
               chr8:45692471-45692763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               64, 124
               

               Conread position:
               98-218
               

               Cow position:
               chr8:22571630-22571751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-245
               

               Cow position:
               chr8:10749042-10748896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr8:27579077-27578921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               63, 82
               

               Conread position:
               98-266
               

               Cow position:
               chr8:1153629-1153796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               63, 48
               

               Conread position:
               98-266
               

               Cow position:
               chr8:1319724-1319556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               63, 128
               

               Conread position:
               98-266
               

               Cow position:
               chr8:2886430-2886262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               63, 40
               

               Conread position:
               98-266
               

               Cow position:
               chr8:8517903-8518072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr8:32437404-32437569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr8:32631347-32631516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr8:47069126-47069294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               63, 129
               

               Conread position:
               98-268
               

               Cow position:
               chr8:6684127-6683956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr8:15711736-15711907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr8:45797635-45797806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-285
               

               Cow position:
               chr8:30891636-30891821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               63, 27
               

               Conread position:
               101-244
               

               Cow position:
               chr8:6065091-6065235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               102-267
               

               Cow position:
               chr8:34348354-34348187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               102-312
               

               Cow position:
               chr8:33431083-33430864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               169
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               103-279
               

               Cow position:
               chr8:47074946-47074768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               103-438
               

               Cow position:
               chr8:46147917-46148255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               28, 11
               

               Conread position:
               105-267
               

               Cow position:
               chr8:9275686-9275520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               50, 33
               

               Conread position:
               144-275
               

               Cow position:
               chr8:59262254-59262384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               17, 85
               

               Conread position:
               148-269
               

               Cow position:
               chr8:45316465-45316588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               148-277
               

               Cow position:
               chr8:27925954-27925826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               10, 112
               

               Conread position:
               151-275
               

               Cow position:
               chr8:32931143-32931019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               102, 7
               

               Conread position:
               160-401
               

               Cow position:
               chr8:42468359-42468121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               159, 110
               

               Conread position:
               212-403
               

               Cow position:
               chr8:44694165-44693989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               213-401
               

               Cow position:
               chr8:44075993-44076192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               74, 64
               

               Conread position:
               23-379
               

               Cow position:
               chr9:63854991-63854626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               254
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               47, 13
               

               Conread position:
               91-318
               

               Cow position:
               chr9:20308805-20309030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               70, 35
               

               Conread position:
               92-318
               

               Cow position:
               chr9:42556266-42556033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               51, 71
               

               Conread position:
               93-212
               

               Cow position:
               chr9:31807908-31807789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               65, 107
               

               Conread position:
               93-265
               

               Cow position:
               chr9:1995571-1995743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               143
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               65, 130
               

               Conread position:
               93-267
               

               Cow position:
               chr9:7003126-7002952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-267
               

               Cow position:
               chr9:59444194-59444020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               42, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr9:9013441-9013267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               68, 36
               

               Conread position:
               93-268
               

               Cow position:
               chr9:10322143-10321977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               65, 108
               

               Conread position:
               93-268
               

               Cow position:
               chr9:27035023-27034849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               65, 136
               

               Conread position:
               93-268
               

               Cow position:
               chr9:29027861-29028032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               65, 45
               

               Conread position:
               93-268
               

               Cow position:
               chr9:37970867-37971042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr9:47002533-47002358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chr9:60277679-60277853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               93-269
               

               Cow position:
               chr9:42569244-42569066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-270
               

               Cow position:
               chr9:5004322-5004159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               93-270
               

               Cow position:
               chr9:7061751-7061927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               68, 128
               

               Conread position:
               93-270
               

               Cow position:
               chr9:42310025-42309848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               146
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-275
               

               Cow position:
               chr9:3566498-3566691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               93-275
               

               Cow position:
               chr9:6050707-6050887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               68, 28
               

               Conread position:
               93-275
               

               Cow position:
               chr9:6830166-6830348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               34, 67
               

               Conread position:
               93-275
               

               Cow position:
               chr9:22653910-22653727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-276
               

               Cow position:
               chr9:28022142-28021951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               25, 47
               

               Conread position:
               93-283
               

               Cow position:
               chr9:4532835-4532646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               152
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-283
               

               Cow position:
               chr9:30672710-30672520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               151
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-283
               

               Cow position:
               chr9:37162471-37162660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-285
               

               Cow position:
               chr9:18509458-18509652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               158
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               38, 158
               

               Conread position:
               93-285
               

               Cow position:
               chr9:51181847-51182043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               68, 12
               

               Conread position:
               93-285
               

               Cow position:
               chr9:59173809-59174009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               93-293
               

               Cow position:
               chr9:1980328-1980130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               65, 108
               

               Conread position:
               93-324
               

               Cow position:
               chr9:2171400-2171167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               68, 17
               

               Conread position:
               93-410
               

               Cow position:
               chr9:4282115-4281789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               146, 64
               

               Conread position:
               93-459
               

               Cow position:
               chr9:3803681-3803313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               93-460
               

               Cow position:
               chr9:13476543-13476920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 288
               

               Conread position:
               95-215
               

               Cow position:
               chr9:59454925-59455046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               95-258
               

               Cow position:
               chr9:25754888-25755052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               96-214
               

               Cow position:
               chr9:3543179-3543060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               96-266
               

               Cow position:
               chr9:25484205-25484034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               96-266
               

               Cow position:
               chr9:45873680-45873510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               65, 55
               

               Conread position:
               96-267
               

               Cow position:
               chr9:2487800-2487967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               65, 20
               

               Conread position:
               96-268
               

               Cow position:
               chr9:16176108-16175936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               142
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               65, 154
               

               Conread position:
               96-275
               

               Cow position:
               chr9:59536431-59536256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               59, 38
               

               Conread position:
               96-399
               

               Cow position:
               chr9:44818517-44818225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 62
               

               Conread position:
               96-400
               

               Cow position:
               chr9:1636287-1635996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               62, 138
               

               Conread position:
               96-419
               

               Cow position:
               chr9:3354344-3354671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 110
               

               Conread position:
               96-435
               

               Cow position:
               chr9:59426109-59425749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               65, 292
               

               Conread position:
               97-449
               

               Cow position:
               chr9:28688442-28688070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               262
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               34, 290
               

               Conread position:
               98-215
               

               Cow position:
               chr9:50791046-50790928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-242
               

               Cow position:
               chr9:28440141-28439996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-248
               

               Cow position:
               chr9:1251662-1251813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr9:780472-780633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-265
               

               Cow position:
               chr9:3005912-3006081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr9:222196-222363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr9:17064055-17064220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               63, 131
               

               Conread position:
               98-266
               

               Cow position:
               chr9:25035513-25035682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chr9:27934420-27934252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               63, 114
               

               Conread position:
               98-266
               

               Cow position:
               chr9:28678305-28678136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-267
               

               Cow position:
               chr9:25022965-25023131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               63, 114
               

               Conread position:
               98-267
               

               Cow position:
               chr9:51211014-51210843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr9:163171-163342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr9:31064765-31064594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr9:49177495-49177666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-269
               

               Cow position:
               chr9:36724834-36724663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               63, 163
               

               Conread position:
               98-269
               

               Cow position:
               chr9:64018129-64018300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               63, 163
               

               Conread position:
               101-245
               

               Cow position:
               chr9:1075868-1076013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               101-248
               

               Cow position:
               chr9:30827010-30826863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               60, 72
               

               Conread position:
               101-266
               

               Cow position:
               chr9:60651383-60651549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               101-267
               

               Cow position:
               chr9:16268701-16268533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               105-266
               

               Cow position:
               chr9:130863-131026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               110-283
               

               Cow position:
               chr9:29628423-29628592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               51, 102
               

               Conread position:
               113-275
               

               Cow position:
               chr9:2186288-2186127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               58, 125
               

               Conread position:
               121-419
               

               Cow position:
               chr9:30487868-30487564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               38, 216
               

               Conread position:
               129-326
               

               Cow position:
               chr9:9705869-9705669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               29, 49
               

               Conread position:
               131-271
               

               Cow position:
               chr9:34242300-34242444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               137-397
               

               Cow position:
               chr9:64119528-64119265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               192
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               21, 238
               

               Conread position:
               139-459
               

               Cow position:
               chr9:2000704-2001027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               245
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               19, 113
               

               Conread position:
               141-265
               

               Cow position:
               chr9:31021115-31020992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               110, 15
               

               Conread position:
               143-264
               

               Cow position:
               chr9:3156315-3156193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               146-383
               

               Cow position:
               chr9:2204332-2204102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               182, 12
               

               Conread position:
               157-267
               

               Cow position:
               chr9:9985670-9985560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               99, 55
               

               Conread position:
               210-399
               

               Cow position:
               chr9:34721700-34721502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               77, 174
               

               Conread position:
               212-392
               

               Cow position:
               chr9:44795294-44795110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               107, 167
               

               Conread position:
               213-423
               

               Cow position:
               chr9:43663780-43663568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               76, 101
               

               Conread position:
               92-217
               

               Cow position:
               chrX:5833187-5833313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               92-381
               

               Cow position:
               chrX:10417049-10417352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               29, 9
               

               Conread position:
               93-195
               

               Cow position:
               chrX:27495167-27495064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-197
               

               Cow position:
               chrX:41850950-41851055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-198
               

               Cow position:
               chrX:30711833-30711727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-210
               

               Cow position:
               chrX:20720233-20720115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-214
               

               Cow position:
               chrX:1547224-1547102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-220
               

               Cow position:
               chrX:16238026-16237898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-243
               

               Cow position:
               chrX:29950339-29950492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               93-254
               

               Cow position:
               chrX:21579718-21579556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               66, 14
               

               Conread position:
               93-259
               

               Cow position:
               chrX:31198690-31198524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-266
               

               Cow position:
               chrX:26758357-26758529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               68, 134
               

               Conread position:
               93-267
               

               Cow position:
               chrX:21223171-21223004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               65, 45
               

               Conread position:
               93-267
               

               Cow position:
               chrX:23391349-23391523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               68, 149
               

               Conread position:
               93-267
               

               Cow position:
               chrX:30231852-30232032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               38, 126
               

               Conread position:
               93-268
               

               Cow position:
               chrX:2482386-2482562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               145
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               49, 158
               

               Conread position:
               93-268
               

               Cow position:
               chrX:15126993-15127167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               93-268
               

               Cow position:
               chrX:18954275-18954450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               147
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chrX:21829774-21829599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               68, 149
               

               Conread position:
               93-268
               

               Cow position:
               chrX:22488431-22488256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               chrX:23040877-23041048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               93-268
               

               Cow position:
               chrX:26528224-26528051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               68, 32
               

               Conread position:
               93-268
               

               Cow position:
               chrX:29853319-29853494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-269
               

               Cow position:
               chrX:29885236-29885056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               66, 158
               

               Conread position:
               93-275
               

               Cow position:
               chrX:320713-320534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               65, 119
               

               Conread position:
               93-275
               

               Cow position:
               chrX:971018-970834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               148
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-275
               

               Cow position:
               chrX:12669610-12669797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               93-275
               

               Cow position:
               chrX:23277269-23277087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               152
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 157
               

               Conread position:
               93-275
               

               Cow position:
               chrX:26766949-26767131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               148
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               93-275
               

               Cow position:
               chrX:28603212-28603392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               163, 61
               

               Conread position:
               93-275
               

               Cow position:
               chrX:30056903-30056712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-276
               

               Cow position:
               chrX:24478831-24479008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               62, 74
               

               Conread position:
               93-283
               

               Cow position:
               chrX:16699550-16699361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               153
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-283
               

               Cow position:
               chrX:29793874-29794058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               65, 105
               

               Conread position:
               93-292
               

               Cow position:
               chrX:29285688-29285488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               163
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               93-300
               

               Cow position:
               chrX:13412889-13413100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               165
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               68, 158
               

               Conread position:
               93-315
               

               Cow position:
               chrX:30183644-30183866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               56, 137
               

               Conread position:
               93-326
               

               Cow position:
               chrX:5298974-5299209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               65, 155
               

               Conread position:
               93-368
               

               Cow position:
               chrX:23019573-23019292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               68, 83
               

               Conread position:
               93-369
               

               Cow position:
               chrX:17667649-17667928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 123
               

               Conread position:
               93-383
               

               Cow position:
               chrX:31082223-31081924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               41, 248
               

               Conread position:
               93-386
               

               Cow position:
               chrX:26427396-26427698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               61, 187
               

               Conread position:
               93-397
               

               Cow position:
               chrX:40246631-40246938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               65, 177
               

               Conread position:
               93-403
               

               Cow position:
               chrX:6282502-6282814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 92
               

               Conread position:
               93-430
               

               Cow position:
               chrX:30366925-30367247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               232
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               171, 52
               

               Conread position:
               94-244
               

               Cow position:
               chrX:15179183-15179340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               37, 134
               

               Conread position:
               94-258
               

               Cow position:
               chrX:9008580-9008415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               95-258
               

               Cow position:
               chrX:12654519-12654683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               95-258
               

               Cow position:
               chrX:28585221-28585057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               95-269
               

               Cow position:
               chrX:9125605-9125420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               96-245
               

               Cow position:
               chrX:16812355-16812505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               96-269
               

               Cow position:
               chrX:5336246-5336420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               96-276
               

               Cow position:
               chrX:29096448-29096266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               149
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               65, 146
               

               Conread position:
               96-459
               

               Cow position:
               chrX:2536207-2536581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 289
               

               Conread position:
               98-215
               

               Cow position:
               chrX:12288156-12288274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-219
               

               Cow position:
               chrX:21589212-21589089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               98-228
               

               Cow position:
               chrX:11149079-11149210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-244
               

               Cow position:
               chrX:8588416-8588269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-245
               

               Cow position:
               chrX:5394762-5394911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-245
               

               Cow position:
               chrX:11464764-11464912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-245
               

               Cow position:
               chrX:26399939-26400087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-252
               

               Cow position:
               chrX:7481870-7481715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chrX:2562619-2562780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chrX:12280032-12280193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chrX:12353478-12353317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chrX:12803626-12803787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chrX:13076460-13076620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-258
               

               Cow position:
               chrX:13097034-13097194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-258
               

               Cow position:
               chrX:13397882-13398043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chrX:17478284-17478445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chrX:18219635-18219474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chrX:20359813-20359974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               63, 126
               

               Conread position:
               98-258
               

               Cow position:
               chrX:27426082-27426243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               chrX:31493658-31493497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-264
               

               Cow position:
               chrX:7093836-7093667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-264
               

               Cow position:
               chrX:35530100-35529931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-265
               

               Cow position:
               chrX:5863636-5863467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-265
               

               Cow position:
               chrX:39563693-39563861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chrX:6872835-6873004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chrX:10531320-10531489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chrX:20315824-20315986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               98-266
               

               Cow position:
               chrX:21490435-21490267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               60, 155
               

               Conread position:
               98-266
               

               Cow position:
               chrX:22525366-22525535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chrX:22619070-22619239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chrX:24089639-24089471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               63, 144
               

               Conread position:
               98-266
               

               Cow position:
               chrX:28561976-28562145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chrX:29947945-29947776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chrX:30011277-30011108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               chrX:32066924-32067087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               63, 36
               

               Conread position:
               98-266
               

               Cow position:
               chrX:37812399-37812231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               63, 131
               

               Conread position:
               98-267
               

               Cow position:
               chrX:3375874-3376041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               63, 131
               

               Conread position:
               98-267
               

               Cow position:
               chrX:8454990-8454819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-267
               

               Cow position:
               chrX:8479888-8479718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               64, 163
               

               Conread position:
               98-267
               

               Cow position:
               chrX:28758403-28758572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               63, 162
               

               Conread position:
               98-267
               

               Cow position:
               chrX:37849252-37849083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-268
               

               Cow position:
               chrX:11433939-11433768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chrX:14595009-14594838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               chrX:16362886-16363057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-269
               

               Cow position:
               chrX:8670829-8670658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               63, 163
               

               Conread position:
               98-269
               

               Cow position:
               chrX:18659544-18659716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-269
               

               Cow position:
               chrX:30055497-30055669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-277
               

               Cow position:
               chrX:3420948-3421130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               63, 28
               

               Conread position:
               98-283
               

               Cow position:
               chrX:7752137-7751954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               63, 40
               

               Conread position:
               98-301
               

               Cow position:
               chrX:15980712-15980917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-311
               

               Cow position:
               chrX:22611185-22610972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               63, 155
               

               Conread position:
               98-332
               

               Cow position:
               chrX:5323485-5323724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               63, 204
               

               Conread position:
               100-266
               

               Cow position:
               chrX:1834054-1833896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               61, 82
               

               Conread position:
               101-267
               

               Cow position:
               chrX:7030420-7030255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               60, 38
               

               Conread position:
               101-269
               

               Cow position:
               chrX:21340640-21340470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               102-209
               

               Cow position:
               chrX:29911191-29911299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               102-265
               

               Cow position:
               chrX:30173437-30173602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               102-266
               

               Cow position:
               chrX:2102093-2101928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               102-266
               

               Cow position:
               chrX:28634183-28634347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               58, 36
               

               Conread position:
               102-324
               

               Cow position:
               chrX:30178753-30178980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               40, 23
               

               Conread position:
               102-406
               

               Cow position:
               chrX:18534713-18534421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               56, 79
               

               Conread position:
               102-411
               

               Cow position:
               chrX:13053261-13052959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 96
               

               Conread position:
               103-245
               

               Cow position:
               chrX:41404238-41404383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               103-266
               

               Cow position:
               chrX:2604281-2604117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               103-268
               

               Cow position:
               chrX:41410786-41410954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               105-236
               

               Cow position:
               chrX:30140577-30140704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               105-245
               

               Cow position:
               chrX:31187015-31187156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               107-258
               

               Cow position:
               chrX:12343185-12343033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               107-399
               

               Cow position:
               chrX:44387357-44387071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 226
               

               Conread position:
               112-268
               

               Cow position:
               chrX:507471-507314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               114-275
               

               Cow position:
               chrX:21059020-21058860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               44, 115
               

               Conread position:
               116-267
               

               Cow position:
               chrX:15599156-15599005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               45, 126
               

               Conread position:
               117-394
               

               Cow position:
               chrX:16016453-16016734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               144, 9
               

               Conread position:
               119-275
               

               Cow position:
               chrX:24136181-24136338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               39, 14
               

               Conread position:
               121-267
               

               Cow position:
               chrX:982853-982705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               127-266
               

               Cow position:
               chrX:16275886-16275746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               129-267
               

               Cow position:
               chrX:23047348-23047211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               32, 78
               

               Conread position:
               136-271
               

               Cow position:
               chrX:40056868-40057006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               141-277
               

               Cow position:
               chrX:37142385-37142521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               115, 17
               

               Conread position:
               141-279
               

               Cow position:
               chrX:21289288-21289428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               142-267
               

               Cow position:
               chrX:22778510-22778388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               114, 13
               

               Conread position:
               142-275
               

               Cow position:
               chrX:20804330-20804194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               147-284
               

               Cow position:
               chrX:21632388-21632527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               147-284
               

               Cow position:
               chrX:26627835-26627972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               99, 11
               

               Conread position:
               148-245
               

               Cow position:
               chrX:6909009-6909107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               83
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               148-275
               

               Cow position:
               chrX:24275866-24275737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               160-285
               

               Cow position:
               chrX:32467433-32467309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               214-394
               

               Cow position:
               chrX:31726241-31726053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               76, 64
Conread position:	90-218
Cow position:	chr1:26518389-26518518 (view UCSC Genome Browser custom track)
Alignm length:	130
Alignm identity:	102
Alignm E-value:	6e-25
Alignm gaps (pig, cow):	68, 0
Conread position:	90-327
Cow position:	chr1:30519185-30518948 (view UCSC Genome Browser custom track)
Alignm length:	242
Alignm identity:	184
Alignm E-value:	5.04467e-44
Alignm gaps (pig, cow):	197, 68
Conread position:	91-382
Cow position:	chr1:44100868-44101165 (view UCSC Genome Browser custom track)
Alignm length:	304
Alignm identity:	206
Alignm E-value:	3e-28
Alignm gaps (pig, cow):	41, 32
Conread position:	92-268
Cow position:	chr1:73070560-73070736 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	145
Alignm E-value:	3.99931e-42
Alignm gaps (pig, cow):	69, 158
Conread position:	93-214
Cow position:	chr1:5502460-5502338 (view UCSC Genome Browser custom track)
Alignm length:	123
Alignm identity:	102
Alignm E-value:	3e-28
Alignm gaps (pig, cow):	65, 0
Conread position:	93-240
Cow position:	chr1:24651774-24651625 (view UCSC Genome Browser custom track)
Alignm length:	150
Alignm identity:	118
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	65, 0
Conread position:	93-244
Cow position:	chr1:66999517-66999363 (view UCSC Genome Browser custom track)
Alignm length:	155
Alignm identity:	120
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	68, 0
Conread position:	93-256
Cow position:	chr1:34692714-34692557 (view UCSC Genome Browser custom track)
Alignm length:	164
Alignm identity:	122
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	17, 0
Conread position:	93-262
Cow position:	chr1:31418023-31418191 (view UCSC Genome Browser custom track)
Alignm length:	171
Alignm identity:	130
Alignm E-value:	4e-30
Alignm gaps (pig, cow):	65, 51
Conread position:	93-264
Cow position:	chr1:93855016-93854845 (view UCSC Genome Browser custom track)
Alignm length:	173
Alignm identity:	137
Alignm E-value:	8e-37
Alignm gaps (pig, cow):	68, 148
Conread position:	93-265
Cow position:	chr1:17941293-17941465 (view UCSC Genome Browser custom track)
Alignm length:	174
Alignm identity:	135
Alignm E-value:	2e-34
Alignm gaps (pig, cow):	68, 136
Conread position:	93-266
Cow position:	chr1:68607049-68607221 (view UCSC Genome Browser custom track)
Alignm length:	179
Alignm identity:	135
Alignm E-value:	7e-26
Alignm gaps (pig, cow):	51, 26
Conread position:	93-267
Cow position:	chr1:48246326-48246165 (view UCSC Genome Browser custom track)
Alignm length:	175
Alignm identity:	136
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	46, 0
Conread position:	93-268
Cow position:	chr1:12061722-12061893 (view UCSC Genome Browser custom track)
Alignm length:	177
Alignm identity:	145
Alignm E-value:	1e-39
Alignm gaps (pig, cow):	68, 15
Conread position:	93-269
Cow position:	chr1:31365594-31365765 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	137
Alignm E-value:	4e-32
Alignm gaps (pig, cow):	65, 152
Conread position:	93-274
Cow position:	chr1:69921943-69922126 (view UCSC Genome Browser custom track)
Alignm length:	184
Alignm identity:	146
Alignm E-value:	3e-40
Alignm gaps (pig, cow):	68, 0
Conread position:	93-275
Cow position:	chr1:3385527-3385708 (view UCSC Genome Browser custom track)
Alignm length:	184
Alignm identity:	147
Alignm E-value:	3e-40
Alignm gaps (pig, cow):	68, 29
Conread position:	93-283
Cow position:	chr1:72981762-72981573 (view UCSC Genome Browser custom track)
Alignm length:	192
Alignm identity:	149
Alignm E-value:	3e-38
Alignm gaps (pig, cow):	68, 157
Conread position:	93-284
Cow position:	chr1:76752158-76752350 (view UCSC Genome Browser custom track)
Alignm length:	194
Alignm identity:	154
Alignm E-value:	3.99931e-42
Alignm gaps (pig, cow):	68, 157
Conread position:	93-294
Cow position:	chr1:18013008-18013209 (view UCSC Genome Browser custom track)
Alignm length:	204
Alignm identity:	143
Alignm E-value:	7e-26
Alignm gaps (pig, cow):	69, 134