Cow genome map
| Conread name: | Lym2-sn50_B03.f |
| Conread position: | 175-419 |
| Cow position: | chr1:51983350-51983114 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 190 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 87, 132 |
| Conread position: | 176-381 |
| Cow position: | chr1:1801900-1801692 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 181, 105 |
| Conread position: | 176-419 |
| Cow position: | chr1:53313162-53312920 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 205, 78 |
| Conread position: | 176-403 |
| Cow position: | chr10:2856816-2856594 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 177-370 |
| Cow position: | chr10:55622403-55622596 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 152 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-419 |
| Cow position: | chr12:39357014-39356779 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 124, 94 |
| Conread position: | 174-310 |
| Cow position: | chr13:20527229-20527364 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 57, 68 |
| Conread position: | 188-419 |
| Cow position: | chr14:39774747-39774516 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 177-312 |
| Cow position: | chr15:22531402-22531534 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 176-418 |
| Cow position: | chr17:3387084-3386844 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 187-419 |
| Cow position: | chr17:6566252-6566023 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 187-419 |
| Cow position: | chr18:25626727-25626485 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 183, 0 |
| Conread position: | 189-356 |
| Cow position: | chr18:4707586-4707752 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 182-296 |
| Cow position: | chr19:39583727-39583841 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 176-303 |
| Cow position: | chr2:33537865-33537992 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 118, 65 |
| Conread position: | 176-419 |
| Cow position: | chr2:42800797-42800555 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 55 |
| Conread position: | 176-419 |
| Cow position: | chr2:45462823-45463067 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 226 |
| Conread position: | 170-419 |
| Cow position: | chr22:14816672-14816916 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 178-355 |
| Cow position: | chr22:6085055-6085232 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 191-419 |
| Cow position: | chr22:8099602-8099819 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 175-419 |
| Cow position: | chr25:18490820-18490578 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 29, 50 |
| Conread position: | 176-332 |
| Cow position: | chr25:1762624-1762468 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 176-419 |
| Cow position: | chr25:22549867-22550091 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 38, 28 |
| Conread position: | 175-324 |
| Cow position: | chr26:3684626-3684477 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 176-359 |
| Cow position: | chr26:15857442-15857259 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 146 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 176-418 |
| Cow position: | chr26:20059290-20059052 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 185 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 111, 40 |
| Conread position: | 182-419 |
| Cow position: | chr27:31250629-31250395 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 128, 46 |
| Conread position: | 176-397 |
| Cow position: | chr28:5792457-5792238 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 52, 69 |
| Conread position: | 176-363 |
| Cow position: | chr3:14263118-14262931 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 141, 129 |
| Conread position: | 170-419 |
| Cow position: | chr4:26323487-26323239 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 72 |
| Conread position: | 176-384 |
| Cow position: | chr4:56852639-56852431 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 206 |
| Conread position: | 182-404 |
| Cow position: | chr4:57721572-57721350 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 176-360 |
| Cow position: | chr5:9024508-9024693 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 176-412 |
| Cow position: | chr5:30487023-30486789 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 180 |
| Conread position: | 176-419 |
| Cow position: | chr6:9375585-9375818 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 24, 54 |
| Conread position: | 177-419 |
| Cow position: | chr6:28180179-28180420 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 127, 182 |
| Conread position: | 176-419 |
| Cow position: | chr7:62193355-62193115 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 185 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 205, 129 |
| Conread position: | 177-419 |
| Cow position: | chr7:5241909-5241669 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 177-419 |
| Cow position: | chr8:813121-812880 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 204, 93 |
| Conread position: | 181-419 |
| Cow position: | chr8:21220810-21220573 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 176-311 |
| Cow position: | chrX:5118709-5118845 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 51, 0 |