Cow genome map
| Conread name: | Lym2-sn54_F04.f |
| Conread position: | 255-487 |
| Cow position: | chr1:42201273-42201043 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 111, 28 |
| Conread position: | 271-491 |
| Cow position: | chr1:44701448-44701672 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 95, 47 |
| Conread position: | 249-489 |
| Cow position: | chr10:50193456-50193215 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 14, 74 |
| Conread position: | 253-478 |
| Cow position: | chr10:25529927-25530155 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 255-491 |
| Cow position: | chr11:1285112-1285348 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 111, 50 |
| Conread position: | 255-492 |
| Cow position: | chr11:45852956-45853193 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 105, 63 |
| Conread position: | 255-493 |
| Cow position: | chr11:45460289-45460527 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 7, 12 |
| Conread position: | 319-491 |
| Cow position: | chr14:5642032-5641861 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 47, 33 |
| Conread position: | 243-446 |
| Cow position: | chr15:13533598-13533800 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 123, 15 |
| Conread position: | 245-488 |
| Cow position: | chr15:12770529-12770287 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 121, 14 |
| Conread position: | 253-432 |
| Cow position: | chr15:22803920-22804099 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 73, 61 |
| Conread position: | 239-497 |
| Cow position: | chr16:41823428-41823174 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 100, 23 |
| Conread position: | 253-482 |
| Cow position: | chr17:35018519-35018287 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 113, 13 |
| Conread position: | 253-484 |
| Cow position: | chr17:3550091-3550316 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 255-489 |
| Cow position: | chr17:37460548-37460312 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 63, 92 |
| Conread position: | 230-480 |
| Cow position: | chr18:51331262-51331014 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 136, 31 |
| Conread position: | 263-491 |
| Cow position: | chr18:17736046-17736272 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 103, 123 |
| Conread position: | 270-532 |
| Cow position: | chr18:37725866-37725606 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 96, 35 |
| Conread position: | 271-491 |
| Cow position: | chr18:51300638-51300417 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 95, 50 |
| Conread position: | 462-634 |
| Cow position: | chr18:727045-727218 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 244-477 |
| Cow position: | chr19:1609705-1609935 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 108 |
| Conread position: | 255-483 |
| Cow position: | chr19:19871145-19871375 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 13 |
| Conread position: | 241-477 |
| Cow position: | chr2:871386-871626 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 149 |
| Conread position: | 244-486 |
| Cow position: | chr2:39692840-39692597 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 253-494 |
| Cow position: | chr2:86062521-86062760 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 33, 13 |
| Conread position: | 254-491 |
| Cow position: | chr2:301253-301491 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 101, 12 |
| Conread position: | 256-491 |
| Cow position: | chr2:17769035-17769264 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 108, 37 |
| Conread position: | 254-481 |
| Cow position: | chr20:5201053-5201279 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 88, 12 |
| Conread position: | 244-491 |
| Cow position: | chr21:21623762-21623516 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 122, 22 |
| Conread position: | 263-437 |
| Cow position: | chr21:39593718-39593545 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 101, 42 |
| Conread position: | 252-491 |
| Cow position: | chr23:30850432-30850671 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 114, 9 |
| Conread position: | 267-513 |
| Cow position: | chr27:15258584-15258336 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 51, 12 |
| Conread position: | 230-520 |
| Cow position: | chr28:22234115-22234406 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 31, 10 |
| Conread position: | 236-513 |
| Cow position: | chr28:23916435-23916158 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 130, 24 |
| Conread position: | 239-489 |
| Cow position: | chr29:37626245-37626497 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 127, 30 |
| Conread position: | 234-475 |
| Cow position: | chr3:80580287-80580049 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 13, 7 |
| Conread position: | 240-483 |
| Cow position: | chr3:61115136-61115373 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 244-461 |
| Cow position: | chr3:4794236-4794453 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 122, 166 |
| Conread position: | 248-476 |
| Cow position: | chr3:41582629-41582397 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 105 |
| Conread position: | 285-513 |
| Cow position: | chr3:10038388-10038163 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 81, 45 |
| Conread position: | 233-489 |
| Cow position: | chr4:37947888-37948139 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 133, 7 |
| Conread position: | 239-483 |
| Cow position: | chr4:54129503-54129255 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 270-487 |
| Cow position: | chr4:22492291-22492074 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 96, 157 |
| Conread position: | 233-491 |
| Cow position: | chr6:6492063-6492319 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 24, 35 |
| Conread position: | 234-497 |
| Cow position: | chrX:25321119-25321383 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 94, 170 |
| Conread position: | 239-490 |
| Cow position: | chrX:21781452-21781205 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 213, 14 |
| Conread position: | 244-481 |
| Cow position: | chrX:23314684-23314923 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 11, 24 |
| Conread position: | 255-497 |
| Cow position: | chrX:46929947-46930191 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 8, 64 |
| Conread position: | 270-449 |
| Cow position: | chrX:24225524-24225702 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 91, 51 |
| Conread position: | 286-521 |
| Cow position: | chrX:31803965-31803728 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 80, 231 |
| Conread position: | 295-489 |
| Cow position: | chrX:37071295-37071480 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 70, 14 |