Cow genome map
| Conread name: | Lym2-sn57_H04.f | 
| Conread position: | 95-612 | 
| Cow position: | chr1:24235379-24235892 (view UCSC Genome Browser custom track) | 
| Alignm length: | 526 | 
| Alignm identity: | 360 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 130 | 
| Conread position: | 96-607 | 
| Cow position: | chr1:74822579-74822081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 516 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 29 | 
| Conread position: | 148-498 | 
| Cow position: | chr1:80900202-80899847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 100, 72 | 
| Conread position: | 149-466 | 
| Cow position: | chr1:89076552-89076865 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 156, 71 | 
| Conread position: | 149-581 | 
| Cow position: | chr1:69694912-69695350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 156, 55 | 
| Conread position: | 149-605 | 
| Cow position: | chr1:57575683-57576130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 156, 79 | 
| Conread position: | 153-525 | 
| Cow position: | chr1:81613466-81613097 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 152, 67 | 
| Conread position: | 154-604 | 
| Cow position: | chr1:82936521-82936951 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 209, 66 | 
| Conread position: | 155-448 | 
| Cow position: | chr1:26178736-26179025 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 95, 65 | 
| Conread position: | 155-470 | 
| Cow position: | chr1:10942019-10942325 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 93, 65 | 
| Conread position: | 155-470 | 
| Cow position: | chr1:10964367-10964061 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 93, 65 | 
| Conread position: | 155-539 | 
| Cow position: | chr1:874729-874341 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 83, 63 | 
| Conread position: | 155-587 | 
| Cow position: | chr1:96478775-96478331 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 94, 65 | 
| Conread position: | 155-588 | 
| Cow position: | chr1:70297353-70296917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 119, 75 | 
| Conread position: | 155-604 | 
| Cow position: | chr1:26895736-26896190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 175 | 
| Conread position: | 155-604 | 
| Cow position: | chr1:91816696-91817138 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 65 | 
| Conread position: | 155-604 | 
| Cow position: | chr1:92370294-92370724 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 24 | 
| Conread position: | 155-605 | 
| Cow position: | chr1:46693579-46694024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 189, 65 | 
| Conread position: | 155-605 | 
| Cow position: | chr1:63595979-63596427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 150, 59 | 
| Conread position: | 155-638 | 
| Cow position: | chr1:52753085-52753566 (view UCSC Genome Browser custom track) | 
| Alignm length: | 496 | 
| Alignm identity: | 351 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 24 | 
| Conread position: | 156-466 | 
| Cow position: | chr1:89381349-89381050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 88, 64 | 
| Conread position: | 156-604 | 
| Cow position: | chr1:81568954-81569404 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 64 | 
| Conread position: | 159-618 | 
| Cow position: | chr1:85774528-85774081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 464 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 142, 89 | 
| Conread position: | 160-433 | 
| Cow position: | chr1:6788213-6788485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 99, 60 | 
| Conread position: | 160-445 | 
| Cow position: | chr1:62036872-62036593 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 152, 59 | 
| Conread position: | 160-487 | 
| Cow position: | chr1:70538681-70538353 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 90, 60 | 
| Conread position: | 160-487 | 
| Cow position: | chr1:78857259-78857572 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 160-489 | 
| Cow position: | chr1:5135640-5135943 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 203, 70 | 
| Conread position: | 160-525 | 
| Cow position: | chr1:25383738-25383374 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 88 | 
| Conread position: | 160-544 | 
| Cow position: | chr1:41056748-41056377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 68 | 
| Conread position: | 160-546 | 
| Cow position: | chr1:12464594-12464962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 160-549 | 
| Cow position: | chr1:33331024-33331382 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 145, 25 | 
| Conread position: | 160-604 | 
| Cow position: | chr1:38277958-38278399 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 102, 60 | 
| Conread position: | 160-605 | 
| Cow position: | chr1:84811869-84812318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 60 | 
| Conread position: | 160-607 | 
| Cow position: | chr1:56229308-56228883 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 203, 60 | 
| Conread position: | 160-612 | 
| Cow position: | chr1:52039706-52039263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 342 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 26 | 
| Conread position: | 160-612 | 
| Cow position: | chr1:92963465-92963016 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 91, 79 | 
| Conread position: | 161-456 | 
| Cow position: | chr1:98030992-98030696 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 93, 67 | 
| Conread position: | 161-603 | 
| Cow position: | chr1:101634781-101634339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 81 | 
| Conread position: | 163-377 | 
| Cow position: | chr1:87440535-87440325 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 87, 65 | 
| Conread position: | 209-604 | 
| Cow position: | chr1:71946349-71946731 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 19 | 
| Conread position: | 230-490 | 
| Cow position: | chr1:14379529-14379783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 15, 42 | 
| Conread position: | 231-497 | 
| Cow position: | chr1:3661062-3661316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 13, 69 | 
| Conread position: | 244-430 | 
| Cow position: | chr1:102113115-102113301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 65, 10 | 
| Conread position: | 249-604 | 
| Cow position: | chr1:52206663-52206325 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 114, 65 | 
| Conread position: | 261-605 | 
| Cow position: | chr1:72034950-72035297 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 83 | 
| Conread position: | 149-468 | 
| Cow position: | chr10:28176337-28176653 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 78, 95 | 
| Conread position: | 154-497 | 
| Cow position: | chr10:66211244-66211588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 95, 66 | 
| Conread position: | 154-604 | 
| Cow position: | chr10:38942478-38942037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 63 | 
| Conread position: | 155-490 | 
| Cow position: | chr10:65071357-65071027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 154, 59 | 
| Conread position: | 155-538 | 
| Cow position: | chr10:29360964-29360576 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 66, 172 | 
| Conread position: | 155-570 | 
| Cow position: | chr10:27716795-27717202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 150, 65 | 
| Conread position: | 155-605 | 
| Cow position: | chr10:24096327-24096778 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 100 | 
| Conread position: | 155-648 | 
| Cow position: | chr10:52569637-52569152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 499 | 
| Alignm identity: | 339 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 166, 65 | 
| Conread position: | 156-621 | 
| Cow position: | chr10:22527857-22528315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 64 | 
| Conread position: | 158-518 | 
| Cow position: | chr10:15462534-15462185 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 147, 62 | 
| Conread position: | 158-593 | 
| Cow position: | chr10:8093274-8093702 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 62 | 
| Conread position: | 159-562 | 
| Cow position: | chr10:20095805-20095400 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 72 | 
| Conread position: | 160-430 | 
| Cow position: | chr10:7817148-7816885 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 98, 60 | 
| Conread position: | 160-497 | 
| Cow position: | chr10:38014407-38014082 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 83, 68 | 
| Conread position: | 160-520 | 
| Cow position: | chr10:41802859-41803209 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 201, 70 | 
| Conread position: | 160-576 | 
| Cow position: | chr10:17073324-17073722 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 203, 60 | 
| Conread position: | 160-579 | 
| Cow position: | chr10:3998946-3998538 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 160-581 | 
| Cow position: | chr10:53674866-53674448 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 68 | 
| Conread position: | 160-589 | 
| Cow position: | chr10:39875113-39875518 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 68 | 
| Conread position: | 160-595 | 
| Cow position: | chr10:13368393-13367966 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 61 | 
| Conread position: | 160-603 | 
| Cow position: | chr10:16598729-16598293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 63 | 
| Conread position: | 160-616 | 
| Cow position: | chr10:16645146-16645604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 60 | 
| Conread position: | 160-621 | 
| Cow position: | chr10:28395261-28395698 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 104, 60 | 
| Conread position: | 161-483 | 
| Cow position: | chr10:2449390-2449075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 82, 67 | 
| Conread position: | 161-514 | 
| Cow position: | chr10:1423870-1423524 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 83, 59 | 
| Conread position: | 161-536 | 
| Cow position: | chr10:34430186-34430542 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 142, 59 | 
| Conread position: | 162-509 | 
| Cow position: | chr10:11081002-11080656 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 82, 66 | 
| Conread position: | 162-617 | 
| Cow position: | chr10:7366745-7367208 (view UCSC Genome Browser custom track) | 
| Alignm length: | 476 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 65 | 
| Conread position: | 163-574 | 
| Cow position: | chr10:6489909-6489502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 142, 57 | 
| Conread position: | 163-621 | 
| Cow position: | chr10:10148686-10148215 (view UCSC Genome Browser custom track) | 
| Alignm length: | 486 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 142, 57 | 
| Conread position: | 230-605 | 
| Cow position: | chr10:31400920-31401297 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 118 | 
| Conread position: | 248-495 | 
| Cow position: | chr10:9341776-9342027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 95, 82 | 
| Conread position: | 252-639 | 
| Cow position: | chr10:12315109-12314731 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 53, 88 | 
| Conread position: | 139-605 | 
| Cow position: | chr11:33293712-33294183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 479 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 16 | 
| Conread position: | 146-465 | 
| Cow position: | chr11:81282018-81281692 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 9e-26 | 
| Alignm gaps (pig, cow): | 74, 107 | 
| Conread position: | 149-435 | 
| Cow position: | chr11:23586696-23586413 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 104, 71 | 
| Conread position: | 154-529 | 
| Cow position: | chr11:52132769-52133141 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 72, 131 | 
| Conread position: | 154-621 | 
| Cow position: | chr11:48272253-48271791 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 108, 65 | 
| Conread position: | 155-453 | 
| Cow position: | chr11:57724773-57725069 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 150, 65 | 
| Conread position: | 155-469 | 
| Cow position: | chr11:45872259-45872576 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 90, 66 | 
| Conread position: | 155-524 | 
| Cow position: | chr11:18588534-18588892 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 7.00649e-45 | 
| Alignm gaps (pig, cow): | 210, 65 | 
| Conread position: | 155-539 | 
| Cow position: | chr11:3780366-3780752 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 66, 103 | 
| Conread position: | 155-604 | 
| Cow position: | chr11:48672764-48672316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 73 | 
| Conread position: | 155-605 | 
| Cow position: | chr11:4732394-4731946 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 66 | 
| Conread position: | 155-605 | 
| Cow position: | chr11:77745200-77745657 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 33, 25 | 
| Conread position: | 155-607 | 
| Cow position: | chr11:29916593-29916153 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 6e-32 | 
| Alignm gaps (pig, cow): | 62, 120 | 
| Conread position: | 155-625 | 
| Cow position: | chr11:35881962-35881498 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 4.99997e-41 | 
| Alignm gaps (pig, cow): | 115, 61 | 
| Conread position: | 156-605 | 
| Cow position: | chr11:1849120-1849556 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 72 | 
| Conread position: | 158-399 | 
| Cow position: | chr11:34646638-34646402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 205, 62 | 
| Conread position: | 158-498 | 
| Cow position: | chr11:11125712-11125376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 147, 60 | 
| Conread position: | 160-386 | 
| Cow position: | chr11:30830567-30830792 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 160-444 | 
| Cow position: | chr11:65762544-65762829 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 60, 178 | 
| Conread position: | 160-456 | 
| Cow position: | chr11:15017103-15016802 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 60, 199 | 
| Conread position: | 160-497 | 
| Cow position: | chr11:8828585-8828914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 93, 20 | 
| Conread position: | 160-589 | 
| Cow position: | chr11:69119340-69118922 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 203, 63 | 
| Conread position: | 160-604 | 
| Cow position: | chr11:66733876-66733443 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 203, 60 | 
| Conread position: | 160-605 | 
| Cow position: | chr11:10213517-10213949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 68 | 
| Conread position: | 160-605 | 
| Cow position: | chr11:44032058-44031606 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 143 | 
| Conread position: | 160-605 | 
| Cow position: | chr11:50152767-50153210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 68 | 
| Conread position: | 160-621 | 
| Cow position: | chr11:44636707-44637170 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 68 | 
| Conread position: | 161-525 | 
| Cow position: | chr11:16226746-16226392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 139, 59 | 
| Conread position: | 161-589 | 
| Cow position: | chr11:33349655-33350079 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 144, 59 | 
| Conread position: | 163-605 | 
| Cow position: | chr11:59702530-59702091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 65 | 
| Conread position: | 164-468 | 
| Cow position: | chr11:16342186-16342497 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 64 | 
| Conread position: | 164-485 | 
| Cow position: | chr11:15632511-15632829 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 80, 56 | 
| Conread position: | 168-605 | 
| Cow position: | chr11:35580299-35579861 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 61 | 
| Conread position: | 234-514 | 
| Cow position: | chr11:58102800-58103076 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 9e-37 | 
| Alignm gaps (pig, cow): | 129, 66 | 
| Conread position: | 243-621 | 
| Cow position: | chr11:44036690-44036307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 113, 22 | 
| Conread position: | 248-545 | 
| Cow position: | chr11:56518346-56518643 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 23 | 
| Conread position: | 254-610 | 
| Cow position: | chr11:62709916-62710270 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 7.00649e-44 | 
| Alignm gaps (pig, cow): | 79, 63 | 
| Conread position: | 263-605 | 
| Cow position: | chr11:41239324-41239665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 12 | 
| Conread position: | 149-507 | 
| Cow position: | chr12:30745753-30745398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 156, 64 | 
| Conread position: | 154-603 | 
| Cow position: | chr12:19508527-19508980 (view UCSC Genome Browser custom track) | 
| Alignm length: | 459 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 106, 66 | 
| Conread position: | 155-498 | 
| Cow position: | chr12:45820335-45820663 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 89, 73 | 
| Conread position: | 155-609 | 
| Cow position: | chr12:41217097-41216644 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 127, 65 | 
| Conread position: | 156-421 | 
| Cow position: | chr12:27037420-27037677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 165, 62 | 
| Conread position: | 160-483 | 
| Cow position: | chr12:32169566-32169245 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 95, 41 | 
| Conread position: | 160-501 | 
| Cow position: | chr12:18518699-18518362 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 62, 82 | 
| Conread position: | 160-586 | 
| Cow position: | chr12:15429570-15429994 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 210, 60 | 
| Conread position: | 160-604 | 
| Cow position: | chr12:9143413-9142982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 203, 60 | 
| Conread position: | 160-621 | 
| Cow position: | chr12:6469034-6469471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 89, 60 | 
| Conread position: | 163-604 | 
| Cow position: | chr12:17031638-17031194 (view UCSC Genome Browser custom track) | 
| Alignm length: | 464 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 81, 44 | 
| Conread position: | 204-498 | 
| Cow position: | chr12:29411507-29411790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 40, 24 | 
| Conread position: | 246-456 | 
| Cow position: | chr12:17702284-17702496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 54, 99 | 
| Conread position: | 153-488 | 
| Cow position: | chr13:55674294-55673962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 152, 67 | 
| Conread position: | 155-435 | 
| Cow position: | chr13:14771368-14771650 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 77, 105 | 
| Conread position: | 155-447 | 
| Cow position: | chr13:61188449-61188736 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 162, 65 | 
| Conread position: | 155-466 | 
| Cow position: | chr13:5263365-5263065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 208, 65 | 
| Conread position: | 155-467 | 
| Cow position: | chr13:7059378-7059696 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 66, 94 | 
| Conread position: | 155-517 | 
| Cow position: | chr13:19023932-19023567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 131, 65 | 
| Conread position: | 155-524 | 
| Cow position: | chr13:61047130-61047485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 208, 65 | 
| Conread position: | 155-604 | 
| Cow position: | chr13:44626284-44626737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 464 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 83, 66 | 
| Conread position: | 155-604 | 
| Cow position: | chr13:58043544-58043987 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 65 | 
| Conread position: | 155-605 | 
| Cow position: | chr13:12045422-12044981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 191, 68 | 
| Conread position: | 155-605 | 
| Cow position: | chr13:20879908-20879477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 208, 65 | 
| Conread position: | 155-621 | 
| Cow position: | chr13:20606201-20605743 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 65 | 
| Conread position: | 156-413 | 
| Cow position: | chr13:20473765-20473520 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 205, 64 | 
| Conread position: | 156-450 | 
| Cow position: | chr13:9593422-9593711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 105, 74 | 
| Conread position: | 156-481 | 
| Cow position: | chr13:55316274-55315953 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 88, 71 | 
| Conread position: | 156-493 | 
| Cow position: | chr13:11460550-11460871 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 161, 64 | 
| Conread position: | 156-603 | 
| Cow position: | chr13:34941733-34941299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 108, 73 | 
| Conread position: | 156-612 | 
| Cow position: | chr13:31808438-31808879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 459 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 188, 58 | 
| Conread position: | 158-485 | 
| Cow position: | chr13:17114460-17114140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 91, 70 | 
| Conread position: | 160-409 | 
| Cow position: | chr13:15902945-15903180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 203, 60 | 
| Conread position: | 160-491 | 
| Cow position: | chr13:23856132-23856461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 135, 57 | 
| Conread position: | 160-497 | 
| Cow position: | chr13:23478951-23479281 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 156, 60 | 
| Conread position: | 160-509 | 
| Cow position: | chr13:15233847-15234174 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 201, 68 | 
| Conread position: | 160-557 | 
| Cow position: | chr13:56148442-56148852 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 50, 72 | 
| Conread position: | 160-557 | 
| Cow position: | chr13:56160525-56160115 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 50, 72 | 
| Conread position: | 160-576 | 
| Cow position: | chr13:13320718-13321111 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 109, 71 | 
| Conread position: | 160-584 | 
| Cow position: | chr13:42113940-42114356 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 160-594 | 
| Cow position: | chr13:15958535-15958966 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 98 | 
| Conread position: | 160-604 | 
| Cow position: | chr13:52057478-52057898 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 68 | 
| Conread position: | 160-605 | 
| Cow position: | chr13:31813797-31814225 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 70 | 
| Conread position: | 160-605 | 
| Cow position: | chr13:41806693-41807126 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 68 | 
| Conread position: | 160-605 | 
| Cow position: | chr13:52283833-52284269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 158, 52 | 
| Conread position: | 160-627 | 
| Cow position: | chr13:21176401-21175944 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 68 | 
| Conread position: | 160-646 | 
| Cow position: | chr13:38284057-38283582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 494 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 58 | 
| Conread position: | 160-649 | 
| Cow position: | chr13:47007798-47007335 (view UCSC Genome Browser custom track) | 
| Alignm length: | 492 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 201, 63 | 
| Conread position: | 161-616 | 
| Cow position: | chr13:46324867-46324419 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 106, 59 | 
| Conread position: | 161-628 | 
| Cow position: | chr13:20666464-20666005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 22 | 
| Conread position: | 167-605 | 
| Cow position: | chr13:49804903-49805327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 140, 51 | 
| Conread position: | 169-466 | 
| Cow position: | chr13:17745173-17745459 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 95, 49 | 
| Conread position: | 149-458 | 
| Cow position: | chr14:19372306-19372613 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 151, 79 | 
| Conread position: | 154-447 | 
| Cow position: | chr14:28115216-28114924 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 12, 67 | 
| Conread position: | 155-485 | 
| Cow position: | chr14:19851053-19850734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 105, 65 | 
| Conread position: | 155-487 | 
| Cow position: | chr14:49929771-49929435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 95, 75 | 
| Conread position: | 155-548 | 
| Cow position: | chr14:41809680-41809291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 150, 66 | 
| Conread position: | 155-604 | 
| Cow position: | chr14:43249561-43250001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 189, 65 | 
| Conread position: | 155-605 | 
| Cow position: | chr14:31130402-31129971 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 88, 63 | 
| Conread position: | 156-627 | 
| Cow position: | chr14:41210829-41211308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 489 | 
| Alignm identity: | 339 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 22 | 
| Conread position: | 157-437 | 
| Cow position: | chr14:27919760-27919489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 86, 25 | 
| Conread position: | 160-456 | 
| Cow position: | chr14:11043513-11043222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 149, 60 | 
| Conread position: | 160-483 | 
| Cow position: | chr14:38338156-38337855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 160, 60 | 
| Conread position: | 160-499 | 
| Cow position: | chr14:10078246-10078569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 184, 60 | 
| Conread position: | 160-513 | 
| Cow position: | chr14:16834300-16834655 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 96, 60 | 
| Conread position: | 160-541 | 
| Cow position: | chr14:11508257-11507888 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 143, 63 | 
| Conread position: | 160-571 | 
| Cow position: | chr14:37103188-37103583 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 9.00054e-42 | 
| Alignm gaps (pig, cow): | 101, 60 | 
| Conread position: | 160-637 | 
| Cow position: | chr14:34199865-34199392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 487 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 68 | 
| Conread position: | 161-488 | 
| Cow position: | chr14:32452228-32452562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 82, 67 | 
| Conread position: | 161-605 | 
| Cow position: | chr14:41479683-41479241 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 142, 53 | 
| Conread position: | 266-588 | 
| Cow position: | chr14:10156769-10157105 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 6, 52 | 
| Conread position: | 149-496 | 
| Cow position: | chr15:16476726-16476386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 8, 72 | 
| Conread position: | 149-519 | 
| Cow position: | chr15:16307436-16307794 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 156, 79 | 
| Conread position: | 151-605 | 
| Cow position: | chr15:41360934-41360500 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 326, 91 | 
| Conread position: | 154-563 | 
| Cow position: | chr15:23180459-23180841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 151, 66 | 
| Conread position: | 155-604 | 
| Cow position: | chr15:15880946-15881383 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 65 | 
| Conread position: | 156-612 | 
| Cow position: | chr15:24967815-24968257 (view UCSC Genome Browser custom track) | 
| Alignm length: | 464 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 139, 74 | 
| Conread position: | 156-618 | 
| Cow position: | chr15:1083355-1082911 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 147, 74 | 
| Conread position: | 160-456 | 
| Cow position: | chr15:11996002-11995711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 84, 68 | 
| Conread position: | 160-497 | 
| Cow position: | chr15:24994488-24994172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 84, 67 | 
| Conread position: | 160-530 | 
| Cow position: | chr15:42789123-42788774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 79, 58 | 
| Conread position: | 160-604 | 
| Cow position: | chr15:18720339-18720777 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 144, 41 | 
| Conread position: | 160-605 | 
| Cow position: | chr15:45479027-45479471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 60 | 
| Conread position: | 160-621 | 
| Cow position: | chr15:6530823-6530358 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 68 | 
| Conread position: | 161-551 | 
| Cow position: | chr15:13515392-13515779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 59 | 
| Conread position: | 164-436 | 
| Cow position: | chr15:25906936-25907207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 68, 142 | 
| Conread position: | 149-557 | 
| Cow position: | chr16:48956874-48956479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 81 | 
| Conread position: | 150-589 | 
| Cow position: | chr16:32587279-32586843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 93, 70 | 
| Conread position: | 155-464 | 
| Cow position: | chr16:39695413-39695711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 208, 75 | 
| Conread position: | 155-467 | 
| Cow position: | chr16:10148352-10148045 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 150, 63 | 
| Conread position: | 155-470 | 
| Cow position: | chr16:53048622-53048311 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 150, 65 | 
| Conread position: | 155-488 | 
| Cow position: | chr16:35195543-35195868 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 109, 65 | 
| Conread position: | 155-574 | 
| Cow position: | chr16:21450917-21450510 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 150, 65 | 
| Conread position: | 155-593 | 
| Cow position: | chr16:44744063-44744512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 94, 65 | 
| Conread position: | 155-605 | 
| Cow position: | chr16:31978116-31978563 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 150, 63 | 
| Conread position: | 155-616 | 
| Cow position: | chr16:54298538-54298093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 464 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 303, 65 | 
| Conread position: | 155-621 | 
| Cow position: | chr16:30290378-30289924 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 106, 65 | 
| Conread position: | 156-485 | 
| Cow position: | chr16:26649560-26649888 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 149, 64 | 
| Conread position: | 156-605 | 
| Cow position: | chr16:48340625-48341063 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 66 | 
| Conread position: | 158-481 | 
| Cow position: | chr16:9729262-9728953 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 186, 62 | 
| Conread position: | 160-385 | 
| Cow position: | chr16:17945586-17945364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 84, 68 | 
| Conread position: | 160-432 | 
| Cow position: | chr16:45678043-45677774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 84, 68 | 
| Conread position: | 160-468 | 
| Cow position: | chr16:25839685-25839380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 84, 68 | 
| Conread position: | 160-497 | 
| Cow position: | chr16:47518910-47518582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 163, 60 | 
| Conread position: | 160-513 | 
| Cow position: | chr16:47820632-47820288 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 33 | 
| Conread position: | 160-541 | 
| Cow position: | chr16:37380335-37379959 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 102, 58 | 
| Conread position: | 160-581 | 
| Cow position: | chr16:37669672-37670093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 160-586 | 
| Cow position: | chr16:46752206-46752635 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 19 | 
| Conread position: | 160-604 | 
| Cow position: | chr16:31122185-31122629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 112 | 
| Conread position: | 160-605 | 
| Cow position: | chr16:25170458-25170018 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 60 | 
| Conread position: | 160-628 | 
| Cow position: | chr16:52834823-52835270 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 68 | 
| Conread position: | 161-492 | 
| Cow position: | chr16:24023233-24023561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 139, 59 | 
| Conread position: | 161-527 | 
| Cow position: | chr16:33054417-33054761 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 83, 67 | 
| Conread position: | 161-625 | 
| Cow position: | chr16:11102757-11103232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 59 | 
| Conread position: | 163-605 | 
| Cow position: | chr16:601008-600569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 142, 57 | 
| Conread position: | 164-384 | 
| Cow position: | chr16:12320282-12320065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 80, 64 | 
| Conread position: | 202-470 | 
| Cow position: | chr16:35168755-35168485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 9, 28 | 
| Conread position: | 231-600 | 
| Cow position: | chr16:4145063-4144690 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 13, 119 | 
| Conread position: | 247-605 | 
| Cow position: | chr16:48369969-48370321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 58 | 
| Conread position: | 248-604 | 
| Cow position: | chr16:56912736-56913086 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 46, 59 | 
| Conread position: | 352-635 | 
| Cow position: | chr16:41064886-41065168 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 10, 97 | 
| Conread position: | 95-480 | 
| Cow position: | chr17:38647245-38646859 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 8.00001e-41 | 
| Alignm gaps (pig, cow): | 57, 139 | 
| Conread position: | 97-483 | 
| Cow position: | chr17:1275691-1275307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 146, 85 | 
| Conread position: | 154-530 | 
| Cow position: | chr17:21114843-21115204 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 104, 66 | 
| Conread position: | 154-594 | 
| Cow position: | chr17:20022403-20022840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 151, 74 | 
| Conread position: | 155-469 | 
| Cow position: | chr17:24490651-24490323 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 66, 127 | 
| Conread position: | 155-581 | 
| Cow position: | chr17:34079001-34079408 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 306, 65 | 
| Conread position: | 155-589 | 
| Cow position: | chr17:43141599-43142038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 86 | 
| Conread position: | 155-603 | 
| Cow position: | chr17:14050097-14050524 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 224, 65 | 
| Conread position: | 155-604 | 
| Cow position: | chr17:17180153-17179707 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 63, 76 | 
| Conread position: | 158-424 | 
| Cow position: | chr17:31037270-31037532 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 111, 69 | 
| Conread position: | 160-424 | 
| Cow position: | chr17:4968217-4967958 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 84, 60 | 
| Conread position: | 160-443 | 
| Cow position: | chr17:24821966-24821695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 201, 42 | 
| Conread position: | 160-449 | 
| Cow position: | chr17:32273582-32273861 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 8e-21 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 160-457 | 
| Cow position: | chr17:12536360-12536653 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 107, 60 | 
| Conread position: | 160-497 | 
| Cow position: | chr17:24587729-24587392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 68 | 
| Conread position: | 160-536 | 
| Cow position: | chr17:26818353-26818717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 203, 68 | 
| Conread position: | 160-550 | 
| Cow position: | chr17:5422964-5423356 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 60 | 
| Conread position: | 160-570 | 
| Cow position: | chr17:15664782-15664370 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 58 | 
| Conread position: | 160-575 | 
| Cow position: | chr17:25901305-25900895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 68 | 
| Conread position: | 160-604 | 
| Cow position: | chr17:18490645-18490203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 60 | 
| Conread position: | 160-605 | 
| Cow position: | chr17:24824347-24823930 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 68 | 
| Conread position: | 160-605 | 
| Cow position: | chr17:32138319-32138731 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 202, 60 | 
| Conread position: | 160-621 | 
| Cow position: | chr17:32989581-32989143 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 149, 62 | 
| Conread position: | 160-621 | 
| Cow position: | chr17:32993519-32993963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 149, 62 | 
| Conread position: | 161-436 | 
| Cow position: | chr17:4105890-4106150 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 165, 59 | 
| Conread position: | 161-469 | 
| Cow position: | chr17:1256396-1256702 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 89, 59 | 
| Conread position: | 161-621 | 
| Cow position: | chr17:33933641-33934096 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 61 | 
| Conread position: | 164-498 | 
| Cow position: | chr17:35126811-35126487 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 200, 66 | 
| Conread position: | 182-494 | 
| Cow position: | chr17:41289939-41290240 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 62, 46 | 
| Conread position: | 189-494 | 
| Cow position: | chr17:23246284-23245990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 62, 39 | 
| Conread position: | 246-475 | 
| Cow position: | chr17:44232691-44232924 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 8e-31 | 
| Alignm gaps (pig, cow): | 50, 102 | 
| Conread position: | 246-497 | 
| Cow position: | chr17:5745230-5745469 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 49, 56 | 
| Conread position: | 248-488 | 
| Cow position: | chr17:33926105-33926338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 115, 69 | 
| Conread position: | 255-497 | 
| Cow position: | chr17:24761213-24761449 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 48, 93 | 
| Conread position: | 144-560 | 
| Cow position: | chr18:51827328-51826929 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 170, 76 | 
| Conread position: | 154-413 | 
| Cow position: | chr18:1954552-1954808 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 154, 66 | 
| Conread position: | 154-527 | 
| Cow position: | chr18:52637492-52637863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 142, 66 | 
| Conread position: | 155-493 | 
| Cow position: | chr18:39115082-39115439 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 66, 122 | 
| Conread position: | 155-543 | 
| Cow position: | chr18:4748846-4749226 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 115, 58 | 
| Conread position: | 155-589 | 
| Cow position: | chr18:23447025-23447469 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 66, 202 | 
| Conread position: | 156-488 | 
| Cow position: | chr18:42479551-42479870 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 149, 64 | 
| Conread position: | 158-383 | 
| Cow position: | chr18:16686302-16686525 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 101, 76 | 
| Conread position: | 160-491 | 
| Cow position: | chr18:36230695-36231004 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 167, 31 | 
| Conread position: | 160-494 | 
| Cow position: | chr18:11685013-11684694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 203, 59 | 
| Conread position: | 160-523 | 
| Cow position: | chr18:19273065-19273424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 60 | 
| Conread position: | 160-539 | 
| Cow position: | chr18:44801858-44802224 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 203, 70 | 
| Conread position: | 160-541 | 
| Cow position: | chr18:19619973-19619607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 147, 60 | 
| Conread position: | 160-612 | 
| Cow position: | chr18:29356593-29357050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 59 | 
| Conread position: | 161-482 | 
| Cow position: | chr18:28923817-28924116 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 202, 59 | 
| Conread position: | 162-525 | 
| Cow position: | chr18:26535478-26535843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 143, 55 | 
| Conread position: | 163-613 | 
| Cow position: | chr18:43283728-43284165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 142, 57 | 
| Conread position: | 252-605 | 
| Cow position: | chr18:4316255-4315892 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 17 | 
| Conread position: | 255-605 | 
| Cow position: | chr18:36445380-36445023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 293 | 
| Conread position: | 304-566 | 
| Cow position: | chr18:45395896-45395625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 59, 67 | 
| Conread position: | 153-491 | 
| Cow position: | chr19:21363377-21363713 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 112, 69 | 
| Conread position: | 154-543 | 
| Cow position: | chr19:39245959-39245576 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 66 | 
| Conread position: | 154-605 | 
| Cow position: | chr19:16567212-16566773 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 209, 74 | 
| Conread position: | 155-476 | 
| Cow position: | chr19:53776515-53776835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 148, 92 | 
| Conread position: | 155-516 | 
| Cow position: | chr19:6609939-6610298 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 150, 65 | 
| Conread position: | 155-524 | 
| Cow position: | chr19:18750017-18750386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 135, 65 | 
| Conread position: | 155-542 | 
| Cow position: | chr19:33912566-33912955 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 107, 65 | 
| Conread position: | 155-557 | 
| Cow position: | chr19:23403586-23403988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 189, 65 | 
| Conread position: | 155-612 | 
| Cow position: | chr19:56150005-56150449 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 24 | 
| Conread position: | 155-618 | 
| Cow position: | chr19:38842501-38842945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 208, 65 | 
| Conread position: | 156-431 | 
| Cow position: | chr19:48960455-48960179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 93, 64 | 
| Conread position: | 160-466 | 
| Cow position: | chr19:34001260-34000963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 201, 59 | 
| Conread position: | 160-475 | 
| Cow position: | chr19:3621483-3621172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 84, 68 | 
| Conread position: | 160-477 | 
| Cow position: | chr19:21378416-21378724 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 201, 60 | 
| Conread position: | 160-484 | 
| Cow position: | chr19:33469074-33468759 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 88, 60 | 
| Conread position: | 160-489 | 
| Cow position: | chr19:10213725-10213401 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 144, 68 | 
| Conread position: | 160-489 | 
| Cow position: | chr19:41585022-41584704 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 160-508 | 
| Cow position: | chr19:44397561-44397211 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 56, 47 | 
| Conread position: | 160-586 | 
| Cow position: | chr19:14593109-14592689 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 68 | 
| Conread position: | 160-605 | 
| Cow position: | chr19:15067954-15068379 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 203, 23 | 
| Conread position: | 160-618 | 
| Cow position: | chr19:47110094-47109633 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 91, 70 | 
| Conread position: | 162-621 | 
| Cow position: | chr19:34955647-34956098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 464 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 138, 66 | 
| Conread position: | 165-605 | 
| Cow position: | chr19:34619980-34620416 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 63 | 
| Conread position: | 154-486 | 
| Cow position: | chr2:20947443-20947118 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 78, 123 | 
| Conread position: | 155-452 | 
| Cow position: | chr2:41145385-41145090 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 91, 65 | 
| Conread position: | 155-501 | 
| Cow position: | chr2:47090832-47090499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 154, 65 | 
| Conread position: | 155-566 | 
| Cow position: | chr2:80242113-80242524 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 96 | 
| Conread position: | 155-603 | 
| Cow position: | chr2:14826346-14825912 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 206, 65 | 
| Conread position: | 155-604 | 
| Cow position: | chr2:72528030-72527582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 65 | 
| Conread position: | 155-604 | 
| Cow position: | chr2:80116167-80115749 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 88, 71 | 
| Conread position: | 155-616 | 
| Cow position: | chr2:25283185-25282720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 150, 75 | 
| Conread position: | 156-485 | 
| Cow position: | chr2:21003243-21002933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 91, 74 | 
| Conread position: | 156-498 | 
| Cow position: | chr2:24434211-24434552 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 108, 64 | 
| Conread position: | 156-604 | 
| Cow position: | chr2:44191549-44191107 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 153, 72 | 
| Conread position: | 156-621 | 
| Cow position: | chr2:70704327-70703869 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 108, 64 | 
| Conread position: | 157-485 | 
| Cow position: | chr2:75600790-75600458 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 148, 71 | 
| Conread position: | 157-570 | 
| Cow position: | chr2:56350850-56351255 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 89, 8 | 
| Conread position: | 157-604 | 
| Cow position: | chr2:53532744-53533179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 160, 63 | 
| Conread position: | 160-456 | 
| Cow position: | chr2:33531883-33532172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 100, 70 | 
| Conread position: | 160-470 | 
| Cow position: | chr2:17114665-17114975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 89, 57 | 
| Conread position: | 160-476 | 
| Cow position: | chr2:82262311-82262624 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 112, 70 | 
| Conread position: | 160-483 | 
| Cow position: | chr2:39584514-39584199 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 145, 67 | 
| Conread position: | 160-484 | 
| Cow position: | chr2:25597430-25597746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 160-497 | 
| Cow position: | chr2:13354741-13354409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 160-497 | 
| Cow position: | chr2:41248636-41248302 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 7.00649e-45 | 
| Alignm gaps (pig, cow): | 91, 70 | 
| Conread position: | 160-497 | 
| Cow position: | chr2:46189031-46189356 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 97, 60 | 
| Conread position: | 160-543 | 
| Cow position: | chr2:74260523-74260147 (view UCSC Genome Browser custom track) | 
| Alignm length: | 387 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 138, 68 | 
| Conread position: | 160-547 | 
| Cow position: | chr2:46202327-46201956 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 140, 63 | 
| Conread position: | 160-571 | 
| Cow position: | chr2:53650089-53649693 (view UCSC Genome Browser custom track) | 
| Alignm length: | 414 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 68 | 
| Conread position: | 160-604 | 
| Cow position: | chr2:69676466-69676908 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 58 | 
| Conread position: | 160-605 | 
| Cow position: | chr2:1352059-1352483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 143, 68 | 
| Conread position: | 160-605 | 
| Cow position: | chr2:19494279-19493830 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 60 | 
| Conread position: | 160-605 | 
| Cow position: | chr2:70945469-70945025 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 308, 68 | 
| Conread position: | 160-612 | 
| Cow position: | chr2:44170624-44170179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 203, 68 | 
| Conread position: | 160-612 | 
| Cow position: | chr2:45912567-45913015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 459 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 160-621 | 
| Cow position: | chr2:14089858-14089390 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 164, 60 | 
| Conread position: | 160-621 | 
| Cow position: | chr2:41452298-41451838 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 66 | 
| Conread position: | 161-480 | 
| Cow position: | chr2:46331127-46330807 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 99, 59 | 
| Conread position: | 161-504 | 
| Cow position: | chr2:57932801-57932459 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 193, 53 | 
| Conread position: | 161-525 | 
| Cow position: | chr2:45535530-45535176 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 83, 59 | 
| Conread position: | 162-605 | 
| Cow position: | chr2:71800021-71800465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 59 | 
| Conread position: | 163-491 | 
| Cow position: | chr2:36878156-36878478 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 7.00649e-45 | 
| Alignm gaps (pig, cow): | 93, 57 | 
| Conread position: | 172-575 | 
| Cow position: | chr2:24007476-24007092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 90, 11 | 
| Conread position: | 230-498 | 
| Cow position: | chr2:73094789-73095051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 8, 118 | 
| Conread position: | 253-485 | 
| Cow position: | chr2:80797645-80797421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 205, 107 | 
| Conread position: | 254-654 | 
| Cow position: | chr2:24709369-24709765 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 8 | 
| Conread position: | 304-485 | 
| Cow position: | chr2:16632864-16632682 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 59, 42 | 
| Conread position: | 155-425 | 
| Cow position: | chr20:36010908-36010638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 148, 63 | 
| Conread position: | 155-478 | 
| Cow position: | chr20:39325503-39325180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 106, 65 | 
| Conread position: | 155-485 | 
| Cow position: | chr20:28296406-28296078 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 107, 78 | 
| Conread position: | 155-533 | 
| Cow position: | chr20:40127231-40127594 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 150, 68 | 
| Conread position: | 156-625 | 
| Cow position: | chr20:23870708-23871167 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 58 | 
| Conread position: | 158-524 | 
| Cow position: | chr20:3606852-3607202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 147, 25 | 
| Conread position: | 158-546 | 
| Cow position: | chr20:12581845-12582220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 70 | 
| Conread position: | 160-456 | 
| Cow position: | chr20:36207921-36207620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 5e-37 | 
| Alignm gaps (pig, cow): | 64, 162 | 
| Conread position: | 160-466 | 
| Cow position: | chr20:11542181-11542476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 5e-37 | 
| Alignm gaps (pig, cow): | 101, 67 | 
| Conread position: | 160-466 | 
| Cow position: | chr20:32083975-32084277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 84, 23 | 
| Conread position: | 160-506 | 
| Cow position: | chr20:3331178-3331527 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 4.2039e-45 | 
| Alignm gaps (pig, cow): | 145, 54 | 
| Conread position: | 160-547 | 
| Cow position: | chr20:25009525-25009914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 68 | 
| Conread position: | 160-576 | 
| Cow position: | chr20:39398588-39398177 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 210, 60 | 
| Conread position: | 160-581 | 
| Cow position: | chr20:31740112-31740520 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 68 | 
| Conread position: | 160-586 | 
| Cow position: | chr20:21345540-21345089 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 101 | 
| Conread position: | 160-601 | 
| Cow position: | chr20:6054402-6054831 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 80, 60 | 
| Conread position: | 160-605 | 
| Cow position: | chr20:9412595-9412164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 219, 70 | 
| Conread position: | 160-607 | 
| Cow position: | chr20:31927355-31927791 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 69 | 
| Conread position: | 160-621 | 
| Cow position: | chr20:14806994-14806537 (view UCSC Genome Browser custom track) | 
| Alignm length: | 469 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 68 | 
| Conread position: | 160-621 | 
| Cow position: | chr20:19363255-19363709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 68 | 
| Conread position: | 231-494 | 
| Cow position: | chr20:5826983-5826716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 13, 119 | 
| Conread position: | 250-607 | 
| Cow position: | chr20:33532326-33531977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 208, 15 | 
| Conread position: | 254-541 | 
| Cow position: | chr20:32636552-32636832 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 109, 14 | 
| Conread position: | 259-605 | 
| Cow position: | chr20:22445625-22445969 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 72 | 
| Conread position: | 149-622 | 
| Cow position: | chr21:24858454-24857983 (view UCSC Genome Browser custom track) | 
| Alignm length: | 478 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 112, 69 | 
| Conread position: | 154-604 | 
| Cow position: | chr21:7564173-7564632 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 218 | 
| Conread position: | 154-605 | 
| Cow position: | chr21:11644832-11645296 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 74 | 
| Conread position: | 155-442 | 
| Cow position: | chr21:44962930-44962647 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 88, 68 | 
| Conread position: | 155-456 | 
| Cow position: | chr21:10007506-10007802 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 105, 63 | 
| Conread position: | 155-586 | 
| Cow position: | chr21:36297626-36297187 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 73 | 
| Conread position: | 155-604 | 
| Cow position: | chr21:13048060-13048506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 65 | 
| Conread position: | 156-414 | 
| Cow position: | chr21:30222477-30222222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 153, 64 | 
| Conread position: | 156-594 | 
| Cow position: | chr21:42540090-42540521 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 207, 67 | 
| Conread position: | 160-315 | 
| Cow position: | chr21:44214254-44214099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 104, 23 | 
| Conread position: | 160-390 | 
| Cow position: | chr21:45262682-45262899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 100, 60 | 
| Conread position: | 160-487 | 
| Cow position: | chr21:32559237-32559547 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 9.00054e-42 | 
| Alignm gaps (pig, cow): | 166, 68 | 
| Conread position: | 160-603 | 
| Cow position: | chr21:34654201-34653778 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 145, 54 | 
| Conread position: | 160-604 | 
| Cow position: | chr21:47760896-47760467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 203, 60 | 
| Conread position: | 160-610 | 
| Cow position: | chr21:641715-641271 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 160-612 | 
| Cow position: | chr21:643452-643020 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 59 | 
| Conread position: | 160-612 | 
| Cow position: | chr21:6834177-6833735 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 160-621 | 
| Cow position: | chr21:44515392-44514939 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 179, 71 | 
| Conread position: | 160-633 | 
| Cow position: | chr21:38121229-38120764 (view UCSC Genome Browser custom track) | 
| Alignm length: | 480 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 298, 60 | 
| Conread position: | 161-612 | 
| Cow position: | chr21:31691609-31691164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 83, 24 | 
| Conread position: | 163-498 | 
| Cow position: | chr21:22861127-22860798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 5e-37 | 
| Alignm gaps (pig, cow): | 81, 65 | 
| Conread position: | 166-621 | 
| Cow position: | chr21:29214038-29214482 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 197, 62 | 
| Conread position: | 230-518 | 
| Cow position: | chr21:28626302-28626017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 73, 118 | 
| Conread position: | 249-474 | 
| Cow position: | chr21:45375665-45375436 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 56, 96 | 
| Conread position: | 249-610 | 
| Cow position: | chr21:27863473-27863835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 55 | 
| Conread position: | 252-640 | 
| Cow position: | chr21:48263175-48262789 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 8, 118 | 
| Conread position: | 253-489 | 
| Cow position: | chr21:37345056-37345300 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 11, 116 | 
| Conread position: | 89-621 | 
| Cow position: | chr22:10532636-10532102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 553 | 
| Alignm identity: | 383 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 15 | 
| Conread position: | 104-647 | 
| Cow position: | chr22:34726785-34726253 (view UCSC Genome Browser custom track) | 
| Alignm length: | 552 | 
| Alignm identity: | 374 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 34 | 
| Conread position: | 154-556 | 
| Cow position: | chr22:26134157-26134561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 66 | 
| Conread position: | 154-589 | 
| Cow position: | chr22:17949905-17950315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 114, 66 | 
| Conread position: | 154-603 | 
| Cow position: | chr22:16273707-16273258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 76 | 
| Conread position: | 155-431 | 
| Cow position: | chr22:23689138-23689410 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 149, 65 | 
| Conread position: | 155-456 | 
| Cow position: | chr22:4108664-4108967 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 66, 98 | 
| Conread position: | 155-463 | 
| Cow position: | chr22:27825906-27825603 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 109, 66 | 
| Conread position: | 155-588 | 
| Cow position: | chr22:15760428-15759994 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 88, 65 | 
| Conread position: | 155-604 | 
| Cow position: | chr22:1279319-1279763 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 150, 75 | 
| Conread position: | 155-617 | 
| Cow position: | chr22:15068493-15068021 (view UCSC Genome Browser custom track) | 
| Alignm length: | 486 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 124, 68 | 
| Conread position: | 156-607 | 
| Cow position: | chr22:38939876-38940327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 19 | 
| Conread position: | 156-621 | 
| Cow position: | chr22:13957579-13958039 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 71 | 
| Conread position: | 160-452 | 
| Cow position: | chr22:5616363-5616075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 160-495 | 
| Cow position: | chr22:6494222-6493906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 160-497 | 
| Cow position: | chr22:845964-845633 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 8.00001e-41 | 
| Alignm gaps (pig, cow): | 140, 60 | 
| Conread position: | 160-517 | 
| Cow position: | chr22:644707-645050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 58, 83 | 
| Conread position: | 160-575 | 
| Cow position: | chr22:912159-911757 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 108, 60 | 
| Conread position: | 160-587 | 
| Cow position: | chr22:5337537-5337957 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 84 | 
| Conread position: | 160-589 | 
| Cow position: | chr22:17152738-17152318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 203, 68 | 
| Conread position: | 160-603 | 
| Cow position: | chr22:17992970-17993406 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 67 | 
| Conread position: | 160-604 | 
| Cow position: | chr22:1484924-1484485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 60 | 
| Conread position: | 160-607 | 
| Cow position: | chr22:4645834-4645399 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 140, 68 | 
| Conread position: | 160-612 | 
| Cow position: | chr22:25742888-25743351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 70 | 
| Conread position: | 160-621 | 
| Cow position: | chr22:21295664-21296117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 27 | 
| Conread position: | 161-576 | 
| Cow position: | chr22:8324299-8323898 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 144, 59 | 
| Conread position: | 161-607 | 
| Cow position: | chr22:30483975-30483540 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 144, 68 | 
| Conread position: | 161-621 | 
| Cow position: | chr22:590399-589954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 83, 66 | 
| Conread position: | 163-607 | 
| Cow position: | chr22:32661568-32661137 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 104, 59 | 
| Conread position: | 164-568 | 
| Cow position: | chr22:30699238-30698839 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 55 | 
| Conread position: | 204-603 | 
| Cow position: | chr22:13951197-13950802 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 24 | 
| Conread position: | 229-610 | 
| Cow position: | chr22:13688103-13688494 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 4.2039e-45 | 
| Alignm gaps (pig, cow): | 14, 337 | 
| Conread position: | 241-612 | 
| Cow position: | chr22:30689615-30689247 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 10 | 
| Conread position: | 256-485 | 
| Cow position: | chr22:42612426-42612200 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 7e-30 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 155-501 | 
| Cow position: | chr23:187250-186902 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 150, 65 | 
| Conread position: | 157-546 | 
| Cow position: | chr23:2799650-2799254 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 156, 63 | 
| Conread position: | 160-431 | 
| Cow position: | chr23:5451385-5451123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 144, 70 | 
| Conread position: | 160-438 | 
| Cow position: | chr23:24930005-24930278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 104, 60 | 
| Conread position: | 160-472 | 
| Cow position: | chr23:29521539-29521230 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 89, 54 | 
| Conread position: | 160-488 | 
| Cow position: | chr23:6244530-6244843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 203, 37 | 
| Conread position: | 160-497 | 
| Cow position: | chr23:16881096-16881422 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 67 | 
| Conread position: | 160-537 | 
| Cow position: | chr23:29459032-29459399 (view UCSC Genome Browser custom track) | 
| Alignm length: | 387 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 140, 60 | 
| Conread position: | 160-571 | 
| Cow position: | chr23:39778468-39778077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 100, 63 | 
| Conread position: | 161-421 | 
| Cow position: | chr23:5426499-5426239 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 97, 59 | 
| Conread position: | 161-475 | 
| Cow position: | chr23:5707059-5706756 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 202, 67 | 
| Conread position: | 197-594 | 
| Cow position: | chr23:31607120-31607534 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 121, 21 | 
| Conread position: | 230-530 | 
| Cow position: | chr23:1428811-1428519 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 14, 44 | 
| Conread position: | 232-604 | 
| Cow position: | chr23:406173-406529 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 24 | 
| Conread position: | 248-485 | 
| Cow position: | chr23:31654413-31654188 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 9, 23 | 
| Conread position: | 250-445 | 
| Cow position: | chr23:18296790-18296595 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 9, 138 | 
| Conread position: | 271-495 | 
| Cow position: | chr23:12408550-12408774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 87, 65 | 
| Conread position: | 278-607 | 
| Cow position: | chr23:16495114-16495444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 46, 67 | 
| Conread position: | 149-547 | 
| Cow position: | chr24:3430784-3430381 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 156, 52 | 
| Conread position: | 149-603 | 
| Cow position: | chr24:29673573-29673122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 71 | 
| Conread position: | 149-621 | 
| Cow position: | chr24:15246592-15247040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 71 | 
| Conread position: | 155-439 | 
| Cow position: | chr24:20249851-20250136 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 106, 65 | 
| Conread position: | 155-510 | 
| Cow position: | chr24:42344952-42345312 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 105, 65 | 
| Conread position: | 155-603 | 
| Cow position: | chr24:38815012-38814577 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 65 | 
| Conread position: | 156-483 | 
| Cow position: | chr24:30313982-30314313 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 64 | 
| Conread position: | 156-569 | 
| Cow position: | chr24:24490973-24491373 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 5e-37 | 
| Alignm gaps (pig, cow): | 108, 72 | 
| Conread position: | 156-621 | 
| Cow position: | chr24:31812233-31811772 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 108, 72 | 
| Conread position: | 157-605 | 
| Cow position: | chr24:29595766-29596205 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 127, 73 | 
| Conread position: | 160-400 | 
| Cow position: | chr24:30897496-30897735 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 84, 68 | 
| Conread position: | 160-423 | 
| Cow position: | chr24:28990601-28990348 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 149, 60 | 
| Conread position: | 160-445 | 
| Cow position: | chr24:33221900-33222178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 89, 68 | 
| Conread position: | 160-485 | 
| Cow position: | chr24:27748680-27748375 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 153, 58 | 
| Conread position: | 160-488 | 
| Cow position: | chr24:7914046-7913716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 7.00005e-41 | 
| Alignm gaps (pig, cow): | 104, 60 | 
| Conread position: | 160-497 | 
| Cow position: | chr24:31816618-31816294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 104, 60 | 
| Conread position: | 160-578 | 
| Cow position: | chr24:37650714-37650307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 68 | 
| Conread position: | 160-582 | 
| Cow position: | chr24:2402328-2402753 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 160-604 | 
| Cow position: | chr24:32693759-32693307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 99 | 
| Conread position: | 160-607 | 
| Cow position: | chr24:31324325-31323888 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 111, 60 | 
| Conread position: | 161-604 | 
| Cow position: | chr24:17407428-17406998 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 88, 59 | 
| Conread position: | 163-603 | 
| Cow position: | chr24:212024-211584 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 105, 65 | 
| Conread position: | 167-496 | 
| Cow position: | chr24:27608065-27608384 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 88, 53 | 
| Conread position: | 239-485 | 
| Cow position: | chr24:14746600-14746358 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 19, 88 | 
| Conread position: | 253-480 | 
| Cow position: | chr24:18390337-18390562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 52, 90 | 
| Conread position: | 253-605 | 
| Cow position: | chr24:25245988-25245639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 110, 17 | 
| Conread position: | 254-492 | 
| Cow position: | chr24:35074043-35073806 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 9e-32 | 
| Alignm gaps (pig, cow): | 51, 94 | 
| Conread position: | 255-605 | 
| Cow position: | chr24:27810136-27809780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 258-489 | 
| Cow position: | chr24:30900283-30900510 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 56, 74 | 
| Conread position: | 299-621 | 
| Cow position: | chr24:28303443-28303765 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 11 | 
| Conread position: | 149-421 | 
| Cow position: | chr25:14720817-14720560 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 149-489 | 
| Cow position: | chr25:19679428-19679081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 8.96831e-44 | 
| Alignm gaps (pig, cow): | 73, 93 | 
| Conread position: | 154-388 | 
| Cow position: | chr25:26679294-26679065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 151, 74 | 
| Conread position: | 154-456 | 
| Cow position: | chr25:6961085-6961377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 204, 66 | 
| Conread position: | 154-512 | 
| Cow position: | chr25:20348937-20348574 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 99 | 
| Conread position: | 155-427 | 
| Cow position: | chr25:17342525-17342251 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 150, 65 | 
| Conread position: | 155-491 | 
| Cow position: | chr25:17566654-17566324 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 150, 68 | 
| Conread position: | 155-559 | 
| Cow position: | chr25:6803613-6803233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 31, 23 | 
| Conread position: | 155-603 | 
| Cow position: | chr25:18294247-18294690 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 114, 65 | 
| Conread position: | 156-603 | 
| Cow position: | chr25:11661752-11662190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 147, 72 | 
| Conread position: | 158-315 | 
| Cow position: | chr25:9843240-9843085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 147, 70 | 
| Conread position: | 158-497 | 
| Cow position: | chr25:5836893-5837235 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 61, 115 | 
| Conread position: | 158-621 | 
| Cow position: | chr25:30279144-30279601 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 70 | 
| Conread position: | 158-635 | 
| Cow position: | chr25:8576758-8576291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 488 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 90, 62 | 
| Conread position: | 160-457 | 
| Cow position: | chr25:10217987-10218279 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 99, 68 | 
| Conread position: | 160-485 | 
| Cow position: | chr25:15254286-15254588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 203, 68 | 
| Conread position: | 160-489 | 
| Cow position: | chr25:35612251-35612562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 294, 60 | 
| Conread position: | 160-522 | 
| Cow position: | chr25:6227097-6226747 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 108, 60 | 
| Conread position: | 160-530 | 
| Cow position: | chr25:16319078-16319428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 68 | 
| Conread position: | 160-548 | 
| Cow position: | chr25:15714935-15714559 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 60 | 
| Conread position: | 160-559 | 
| Cow position: | chr25:36036717-36037121 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 68 | 
| Conread position: | 160-583 | 
| Cow position: | chr25:23829067-23829464 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 203, 68 | 
| Conread position: | 160-603 | 
| Cow position: | chr25:18721058-18721471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 68, 80 | 
| Conread position: | 160-605 | 
| Cow position: | chr25:11436745-11437179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 127, 60 | 
| Conread position: | 160-617 | 
| Cow position: | chr25:3145906-3145456 (view UCSC Genome Browser custom track) | 
| Alignm length: | 464 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 144, 53 | 
| Conread position: | 160-619 | 
| Cow position: | chr25:33959190-33959650 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 70 | 
| Conread position: | 161-605 | 
| Cow position: | chr25:21191550-21191113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 67 | 
| Conread position: | 162-497 | 
| Cow position: | chr25:20785526-20785852 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 143, 58 | 
| Conread position: | 162-594 | 
| Cow position: | chr25:35347963-35347537 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 143, 21 | 
| Conread position: | 247-620 | 
| Cow position: | chr25:32191648-32191278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 116, 75 | 
| Conread position: | 251-518 | 
| Cow position: | chr25:10365778-10366042 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 112, 11 | 
| Conread position: | 257-481 | 
| Cow position: | chr25:4002770-4002543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 148-605 | 
| Cow position: | chr26:8307435-8307871 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 215, 80 | 
| Conread position: | 153-484 | 
| Cow position: | chr26:33096470-33096803 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 96, 61 | 
| Conread position: | 155-499 | 
| Cow position: | chr26:29333179-29332848 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 94, 66 | 
| Conread position: | 155-604 | 
| Cow position: | chr26:32683202-32682757 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 65 | 
| Conread position: | 155-625 | 
| Cow position: | chr26:23142018-23142476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 113, 65 | 
| Conread position: | 156-402 | 
| Cow position: | chr26:22892360-22892602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 207, 63 | 
| Conread position: | 156-621 | 
| Cow position: | chr26:12145033-12145479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 89, 64 | 
| Conread position: | 160-390 | 
| Cow position: | chr26:20769932-20769709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 84, 68 | 
| Conread position: | 160-434 | 
| Cow position: | chr26:14175363-14175095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 193, 60 | 
| Conread position: | 160-458 | 
| Cow position: | chr26:25526330-25526036 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 107, 54 | 
| Conread position: | 160-495 | 
| Cow position: | chr26:8811208-8810884 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 145, 61 | 
| Conread position: | 160-499 | 
| Cow position: | chr26:32897788-32898123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 89, 68 | 
| Conread position: | 160-518 | 
| Cow position: | chr26:35704469-35704115 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 84, 60 | 
| Conread position: | 160-589 | 
| Cow position: | chr26:20291611-20292024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 68 | 
| Conread position: | 160-589 | 
| Cow position: | chr26:32652653-32653071 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 154, 68 | 
| Conread position: | 160-605 | 
| Cow position: | chr26:26888052-26888491 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 68 | 
| Conread position: | 160-613 | 
| Cow position: | chr26:8699966-8700415 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 193-477 | 
| Cow position: | chr26:5307191-5306902 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 51, 35 | 
| Conread position: | 254-502 | 
| Cow position: | chr26:9632379-9632626 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 18, 77 | 
| Conread position: | 95-431 | 
| Cow position: | chr27:154192-154525 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 156, 74 | 
| Conread position: | 149-517 | 
| Cow position: | chr27:18593154-18593510 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 153-464 | 
| Cow position: | chr27:26150903-26151210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 50, 77 | 
| Conread position: | 153-466 | 
| Cow position: | chr27:18739262-18739580 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 68, 100 | 
| Conread position: | 155-429 | 
| Cow position: | chr27:22513790-22513520 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 110, 63 | 
| Conread position: | 155-511 | 
| Cow position: | chr27:6499948-6500302 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 154, 65 | 
| Conread position: | 155-605 | 
| Cow position: | chr27:15871048-15871493 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 9e-36 | 
| Alignm gaps (pig, cow): | 197, 62 | 
| Conread position: | 156-605 | 
| Cow position: | chr27:26433919-26433483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 5.99756e-43 | 
| Alignm gaps (pig, cow): | 124, 64 | 
| Conread position: | 157-516 | 
| Cow position: | chr27:30890180-30890528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 87, 63 | 
| Conread position: | 157-604 | 
| Cow position: | chr27:26984236-26984668 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 206, 71 | 
| Conread position: | 160-453 | 
| Cow position: | chr27:3789-4066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 160-489 | 
| Cow position: | chr27:20553624-20553932 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 222, 60 | 
| Conread position: | 160-516 | 
| Cow position: | chr27:16284367-16284715 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 88, 60 | 
| Conread position: | 160-530 | 
| Cow position: | chr27:15204337-15203975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 8e-35 | 
| Alignm gaps (pig, cow): | 222, 58 | 
| Conread position: | 160-580 | 
| Cow position: | chr27:18558253-18558685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 9e-36 | 
| Alignm gaps (pig, cow): | 90, 30 | 
| Conread position: | 160-586 | 
| Cow position: | chr27:22035485-22035065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 203, 60 | 
| Conread position: | 160-604 | 
| Cow position: | chr27:14670490-14670051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 160-612 | 
| Cow position: | chr27:17397562-17397117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 60 | 
| Conread position: | 161-604 | 
| Cow position: | chr27:22426939-22426499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 140, 59 | 
| Conread position: | 163-388 | 
| Cow position: | chr27:20789484-20789260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 86, 68 | 
| Conread position: | 164-473 | 
| Cow position: | chr27:18031179-18030860 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 62, 302 | 
| Conread position: | 164-507 | 
| Cow position: | chr27:26643584-26643906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 83, 19 | 
| Conread position: | 255-525 | 
| Cow position: | chr27:24331702-24331980 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 7, 110 | 
| Conread position: | 270-592 | 
| Cow position: | chr27:20120453-20120783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 50, 28 | 
| Conread position: | 96-574 | 
| Cow position: | chr28:7548921-7549400 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 136 | 
| Conread position: | 149-497 | 
| Cow position: | chr28:29434348-29434688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 93, 73 | 
| Conread position: | 149-612 | 
| Cow position: | chr28:11585122-11585582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 79 | 
| Conread position: | 154-456 | 
| Cow position: | chr28:18625309-18625003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 110, 66 | 
| Conread position: | 154-605 | 
| Cow position: | chr28:25057041-25056601 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 209, 65 | 
| Conread position: | 155-414 | 
| Cow position: | chr28:2131850-2132100 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 160, 65 | 
| Conread position: | 155-428 | 
| Cow position: | chr28:26982664-26982938 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 150, 68 | 
| Conread position: | 155-597 | 
| Cow position: | chr28:11752065-11752506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 73 | 
| Conread position: | 155-603 | 
| Cow position: | chr28:34442684-34443130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 149, 63 | 
| Conread position: | 156-475 | 
| Cow position: | chr28:9636384-9636696 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 131, 72 | 
| Conread position: | 156-576 | 
| Cow position: | chr28:2960757-2961158 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 74 | 
| Conread position: | 156-607 | 
| Cow position: | chr28:5684776-5684333 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 108, 64 | 
| Conread position: | 158-581 | 
| Cow position: | chr28:33884473-33884065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 205, 104 | 
| Conread position: | 160-511 | 
| Cow position: | chr28:5128660-5129002 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 89, 68 | 
| Conread position: | 160-525 | 
| Cow position: | chr28:31109935-31110294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 105, 58 | 
| Conread position: | 160-551 | 
| Cow position: | chr28:12619644-12619250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 68 | 
| Conread position: | 160-600 | 
| Cow position: | chr28:13474369-13473943 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 160-604 | 
| Cow position: | chr28:10745283-10744837 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 60 | 
| Conread position: | 160-605 | 
| Cow position: | chr28:3746271-3745834 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 84 | 
| Conread position: | 160-605 | 
| Cow position: | chr28:14998136-14997695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 198, 71 | 
| Conread position: | 160-621 | 
| Cow position: | chr28:3914786-3914325 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 71 | 
| Conread position: | 161-530 | 
| Cow position: | chr28:15043794-15044150 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 83, 22 | 
| Conread position: | 162-576 | 
| Cow position: | chr28:5204262-5203865 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 66 | 
| Conread position: | 164-588 | 
| Cow position: | chr28:8787605-8787198 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 215, 64 | 
| Conread position: | 167-494 | 
| Cow position: | chr28:21502454-21502137 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 77, 61 | 
| Conread position: | 251-621 | 
| Cow position: | chr28:26614869-26614510 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 99 | 
| Conread position: | 255-613 | 
| Cow position: | chr28:34082038-34082391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 50, 78 | 
| Conread position: | 256-485 | 
| Cow position: | chr28:9108422-9108201 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 48, 8 | 
| Conread position: | 264-498 | 
| Cow position: | chr28:11380073-11380305 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 99, 52 | 
| Conread position: | 149-627 | 
| Cow position: | chr29:36530940-36530465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 214, 79 | 
| Conread position: | 154-604 | 
| Cow position: | chr29:465331-465774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 139, 76 | 
| Conread position: | 155-391 | 
| Cow position: | chr29:31674700-31674465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 105, 73 | 
| Conread position: | 155-429 | 
| Cow position: | chr29:3100200-3100461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 150, 66 | 
| Conread position: | 155-497 | 
| Cow position: | chr29:21933054-21933381 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 189, 63 | 
| Conread position: | 155-502 | 
| Cow position: | chr29:23844905-23844544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 94, 68 | 
| Conread position: | 155-508 | 
| Cow position: | chr29:14501660-14501315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 94, 75 | 
| Conread position: | 155-604 | 
| Cow position: | chr29:1306793-1307238 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 66 | 
| Conread position: | 155-604 | 
| Cow position: | chr29:21443271-21443719 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 106, 65 | 
| Conread position: | 155-621 | 
| Cow position: | chr29:86944-87405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 106, 65 | 
| Conread position: | 156-481 | 
| Cow position: | chr29:1556997-1556680 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 149, 72 | 
| Conread position: | 160-420 | 
| Cow position: | chr29:44988728-44988972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 9e-22 | 
| Alignm gaps (pig, cow): | 205, 63 | 
| Conread position: | 160-480 | 
| Cow position: | chr29:11562675-11562363 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 297, 68 | 
| Conread position: | 160-485 | 
| Cow position: | chr29:8926399-8926715 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 96, 60 | 
| Conread position: | 160-486 | 
| Cow position: | chr29:17222475-17222151 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 9e-32 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 160-489 | 
| Cow position: | chr29:22613492-22613175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 88, 59 | 
| Conread position: | 160-497 | 
| Cow position: | chr29:12680218-12679886 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 160-498 | 
| Cow position: | chr29:2984952-2984618 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 143, 17 | 
| Conread position: | 160-498 | 
| Cow position: | chr29:41530912-41530581 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 160-605 | 
| Cow position: | chr29:17607480-17607040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 62 | 
| Conread position: | 160-612 | 
| Cow position: | chr29:17409397-17408951 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 135, 60 | 
| Conread position: | 160-616 | 
| Cow position: | chr29:15738278-15738732 (view UCSC Genome Browser custom track) | 
| Alignm length: | 463 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 60 | 
| Conread position: | 161-605 | 
| Cow position: | chr29:43328705-43328262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 59 | 
| Conread position: | 231-452 | 
| Cow position: | chr29:39643170-39642954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 130, 8 | 
| Conread position: | 247-422 | 
| Cow position: | chr29:32211079-32211252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 15, 22 | 
| Conread position: | 247-468 | 
| Cow position: | chr29:34744644-34744853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 116, 6 | 
| Conread position: | 369-611 | 
| Cow position: | chr29:10451706-10451949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 149-525 | 
| Cow position: | chr3:67704597-67704218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 99, 71 | 
| Conread position: | 155-479 | 
| Cow position: | chr3:45279511-45279185 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 93, 68 | 
| Conread position: | 155-497 | 
| Cow position: | chr3:54049986-54050309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 188, 91 | 
| Conread position: | 155-512 | 
| Cow position: | chr3:2216413-2216055 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 63 | 
| Conread position: | 155-550 | 
| Cow position: | chr3:48851925-48852304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 5.99756e-43 | 
| Alignm gaps (pig, cow): | 135, 75 | 
| Conread position: | 155-581 | 
| Cow position: | chr3:31206921-31206499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 65 | 
| Conread position: | 155-586 | 
| Cow position: | chr3:49460881-49461316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 116, 65 | 
| Conread position: | 155-592 | 
| Cow position: | chr3:11987374-11986946 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 65 | 
| Conread position: | 155-604 | 
| Cow position: | chr3:60933462-60933035 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 5.99756e-43 | 
| Alignm gaps (pig, cow): | 88, 66 | 
| Conread position: | 155-604 | 
| Cow position: | chr3:79220903-79220453 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 114, 65 | 
| Conread position: | 155-605 | 
| Cow position: | chr3:15954040-15954474 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 303, 65 | 
| Conread position: | 155-616 | 
| Cow position: | chr3:14465661-14466114 (view UCSC Genome Browser custom track) | 
| Alignm length: | 469 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 87 | 
| Conread position: | 157-541 | 
| Cow position: | chr3:78077228-78076858 (view UCSC Genome Browser custom track) | 
| Alignm length: | 387 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 201, 62 | 
| Conread position: | 159-492 | 
| Cow position: | chr3:5374369-5374051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 160-389 | 
| Cow position: | chr3:20677802-20678020 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 145, 23 | 
| Conread position: | 160-398 | 
| Cow position: | chr3:23105322-23105560 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 96, 68 | 
| Conread position: | 160-456 | 
| Cow position: | chr3:43233546-43233255 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 160-489 | 
| Cow position: | chr3:66900693-66901024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 102, 60 | 
| Conread position: | 160-497 | 
| Cow position: | chr3:58131036-58130710 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 74, 94 | 
| Conread position: | 160-498 | 
| Cow position: | chr3:56059851-56059516 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 68 | 
| Conread position: | 160-536 | 
| Cow position: | chr3:58968863-58969222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 211, 68 | 
| Conread position: | 160-612 | 
| Cow position: | chr3:57577737-57577296 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 149, 68 | 
| Conread position: | 160-621 | 
| Cow position: | chr3:70565698-70566152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 68 | 
| Conread position: | 160-645 | 
| Cow position: | chr3:15388259-15387766 (view UCSC Genome Browser custom track) | 
| Alignm length: | 500 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 98 | 
| Conread position: | 164-477 | 
| Cow position: | chr3:44932552-44932246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 64 | 
| Conread position: | 175-478 | 
| Cow position: | chr3:84000641-84000341 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 20, 56 | 
| Conread position: | 193-621 | 
| Cow position: | chr3:49793403-49792999 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 26 | 
| Conread position: | 197-456 | 
| Cow position: | chr3:25755027-25754788 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 232-489 | 
| Cow position: | chr3:26681830-26682075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 17, 69 | 
| Conread position: | 247-522 | 
| Cow position: | chr3:78530491-78530227 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 116, 69 | 
| Conread position: | 255-605 | 
| Cow position: | chr3:38497893-38497546 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 244, 75 | 
| Conread position: | 255-621 | 
| Cow position: | chr3:15057660-15058023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 50, 13 | 
| Conread position: | 281-605 | 
| Cow position: | chr3:16004066-16004382 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 4.99997e-41 | 
| Alignm gaps (pig, cow): | 84, 24 | 
| Conread position: | 80-547 | 
| Cow position: | chr4:570931-570472 (view UCSC Genome Browser custom track) | 
| Alignm length: | 479 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 25 | 
| Conread position: | 149-577 | 
| Cow position: | chr4:21065104-21064679 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 79 | 
| Conread position: | 154-621 | 
| Cow position: | chr4:16799123-16799586 (view UCSC Genome Browser custom track) | 
| Alignm length: | 476 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 151, 66 | 
| Conread position: | 155-470 | 
| Cow position: | chr4:13043325-13043024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 68, 0 | 
| Conread position: | 155-488 | 
| Cow position: | chr4:27665075-27664740 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 105, 68 | 
| Conread position: | 155-506 | 
| Cow position: | chr4:2894093-2893741 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 95, 68 | 
| Conread position: | 155-576 | 
| Cow position: | chr4:28836598-28836179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 65 | 
| Conread position: | 155-604 | 
| Cow position: | chr4:9137341-9136896 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 65 | 
| Conread position: | 155-605 | 
| Cow position: | chr4:42673238-42672789 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 74 | 
| Conread position: | 155-616 | 
| Cow position: | chr4:51903667-51903207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 112, 66 | 
| Conread position: | 157-571 | 
| Cow position: | chr4:44496433-44496038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 206, 63 | 
| Conread position: | 158-594 | 
| Cow position: | chr4:39231462-39231894 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 146, 62 | 
| Conread position: | 160-421 | 
| Cow position: | chr4:11332154-11331892 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 40, 62 | 
| Conread position: | 160-470 | 
| Cow position: | chr4:21232817-21233118 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 127, 60 | 
| Conread position: | 160-472 | 
| Cow position: | chr4:58880904-58881215 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 86, 68 | 
| Conread position: | 160-491 | 
| Cow position: | chr4:46591724-46591394 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 87, 68 | 
| Conread position: | 160-498 | 
| Cow position: | chr4:5460804-5461128 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 89, 60 | 
| Conread position: | 160-503 | 
| Cow position: | chr4:46550437-46550104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 84, 60 | 
| Conread position: | 160-550 | 
| Cow position: | chr4:19008103-19007712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 91, 60 | 
| Conread position: | 160-580 | 
| Cow position: | chr4:48486051-48485636 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 68 | 
| Conread position: | 160-581 | 
| Cow position: | chr4:40414571-40414989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 60 | 
| Conread position: | 160-587 | 
| Cow position: | chr4:14743308-14742895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 61 | 
| Conread position: | 160-591 | 
| Cow position: | chr4:11187508-11187091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 89, 60 | 
| Conread position: | 160-600 | 
| Cow position: | chr4:33970840-33971272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 74 | 
| Conread position: | 160-604 | 
| Cow position: | chr4:38935416-38934998 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 84, 68 | 
| Conread position: | 160-605 | 
| Cow position: | chr4:1015127-1014688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 144, 91 | 
| Conread position: | 160-605 | 
| Cow position: | chr4:61897478-61897914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 160-605 | 
| Cow position: | chr4:66172739-66173176 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 83, 63 | 
| Conread position: | 160-621 | 
| Cow position: | chr4:47730915-47730473 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 68 | 
| Conread position: | 161-621 | 
| Cow position: | chr4:51851262-51850801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 144, 67 | 
| Conread position: | 196-621 | 
| Cow position: | chr4:24458082-24458497 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 34 | 
| Conread position: | 236-604 | 
| Cow position: | chr4:2610216-2609862 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 127, 75 | 
| Conread position: | 289-612 | 
| Cow position: | chr4:6443152-6443465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 26, 37 | 
| Conread position: | 149-452 | 
| Cow position: | chr5:50943056-50943349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 206, 75 | 
| Conread position: | 149-605 | 
| Cow position: | chr5:9894022-9894473 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 79 | 
| Conread position: | 149-605 | 
| Cow position: | chr5:15363983-15363545 (view UCSC Genome Browser custom track) | 
| Alignm length: | 459 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 214, 71 | 
| Conread position: | 154-446 | 
| Cow position: | chr5:57591784-57591501 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 32, 25 | 
| Conread position: | 155-541 | 
| Cow position: | chr5:61576640-61576255 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 105, 65 | 
| Conread position: | 155-604 | 
| Cow position: | chr5:47704031-47704483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 150, 65 | 
| Conread position: | 156-627 | 
| Cow position: | chr5:62172506-62172034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 487 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 207, 64 | 
| Conread position: | 157-456 | 
| Cow position: | chr5:7044612-7044909 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 94, 71 | 
| Conread position: | 157-485 | 
| Cow position: | chr5:36868830-36868516 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 87, 63 | 
| Conread position: | 160-456 | 
| Cow position: | chr5:23168736-23169018 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 87, 60 | 
| Conread position: | 160-456 | 
| Cow position: | chr5:44446775-44447087 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 84, 60 | 
| Conread position: | 160-472 | 
| Cow position: | chr5:26262589-26262890 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 203, 22 | 
| Conread position: | 160-474 | 
| Cow position: | chr5:62142766-62142452 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 178, 68 | 
| Conread position: | 160-485 | 
| Cow position: | chr5:30253831-30253516 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 160-485 | 
| Cow position: | chr5:64137346-64137022 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 160-518 | 
| Cow position: | chr5:34050208-34049847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 101, 60 | 
| Conread position: | 160-526 | 
| Cow position: | chr5:65601547-65601193 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 184, 60 | 
| Conread position: | 160-570 | 
| Cow position: | chr5:65941160-65941566 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 69 | 
| Conread position: | 160-571 | 
| Cow position: | chr5:5110984-5111392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 68 | 
| Conread position: | 161-586 | 
| Cow position: | chr5:74003546-74003975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 156, 33 | 
| Conread position: | 162-612 | 
| Cow position: | chr5:58793519-58793969 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 58 | 
| Conread position: | 163-605 | 
| Cow position: | chr5:32696735-32697146 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 200, 65 | 
| Conread position: | 165-556 | 
| Cow position: | chr5:45170444-45170061 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 95, 55 | 
| Conread position: | 165-621 | 
| Cow position: | chr5:31144702-31145143 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 82, 55 | 
| Conread position: | 167-604 | 
| Cow position: | chr5:34638967-34638545 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 61 | 
| Conread position: | 248-483 | 
| Cow position: | chr5:8821009-8821239 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 115, 81 | 
| Conread position: | 253-535 | 
| Cow position: | chr5:12351792-12352061 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 110, 13 | 
| Conread position: | 256-605 | 
| Cow position: | chr5:65932930-65933278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 49, 135 | 
| Conread position: | 262-612 | 
| Cow position: | chr5:54404899-54405249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 111 | 
| Conread position: | 298-628 | 
| Cow position: | chr5:56443242-56442907 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 7, 167 | 
| Conread position: | 149-434 | 
| Cow position: | chr6:15243370-15243088 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 93, 71 | 
| Conread position: | 149-472 | 
| Cow position: | chr6:528169-528478 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 97, 71 | 
| Conread position: | 149-511 | 
| Cow position: | chr6:38207375-38207734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 71 | 
| Conread position: | 153-477 | 
| Cow position: | chr6:31261105-31260780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 161, 68 | 
| Conread position: | 154-543 | 
| Cow position: | chr6:54365218-54365596 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 151, 66 | 
| Conread position: | 155-468 | 
| Cow position: | chr6:12091884-12092182 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 207, 65 | 
| Conread position: | 155-625 | 
| Cow position: | chr6:35842767-35842306 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 65 | 
| Conread position: | 156-498 | 
| Cow position: | chr6:24468288-24468620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 147, 64 | 
| Conread position: | 156-605 | 
| Cow position: | chr6:28810890-28811330 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 77, 66 | 
| Conread position: | 157-504 | 
| Cow position: | chr6:130056-130398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 44 | 
| Conread position: | 157-519 | 
| Cow position: | chr6:31535462-31535821 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 71 | 
| Conread position: | 157-542 | 
| Cow position: | chr6:48282099-48281723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 104, 66 | 
| Conread position: | 158-424 | 
| Cow position: | chr6:61608618-61608354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 86, 70 | 
| Conread position: | 159-604 | 
| Cow position: | chr6:1770094-1770528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 206, 7 | 
| Conread position: | 160-404 | 
| Cow position: | chr6:38640337-38640094 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 80, 68 | 
| Conread position: | 160-478 | 
| Cow position: | chr6:21231628-21231329 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 219, 70 | 
| Conread position: | 160-485 | 
| Cow position: | chr6:8966201-8965875 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 82 | 
| Conread position: | 160-486 | 
| Cow position: | chr6:17997216-17997531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 135, 47 | 
| Conread position: | 160-493 | 
| Cow position: | chr6:46860063-46860390 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 68 | 
| Conread position: | 160-497 | 
| Cow position: | chr6:9452666-9452996 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 83, 68 | 
| Conread position: | 160-497 | 
| Cow position: | chr6:28976936-28977258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 105, 70 | 
| Conread position: | 160-498 | 
| Cow position: | chr6:44194445-44194773 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 203, 60 | 
| Conread position: | 160-507 | 
| Cow position: | chr6:20097855-20098201 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 68 | 
| Conread position: | 160-577 | 
| Cow position: | chr6:15937751-15938171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 145, 68 | 
| Conread position: | 160-589 | 
| Cow position: | chr6:32122011-32121592 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 68 | 
| Conread position: | 160-605 | 
| Cow position: | chr6:2547359-2546909 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 184 | 
| Conread position: | 160-605 | 
| Cow position: | chr6:10105875-10106335 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 68 | 
| Conread position: | 160-605 | 
| Cow position: | chr6:26728428-26728861 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 166, 68 | 
| Conread position: | 160-621 | 
| Cow position: | chr6:45690506-45690960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 203, 68 | 
| Conread position: | 161-498 | 
| Cow position: | chr6:4383582-4383265 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 144, 65 | 
| Conread position: | 161-605 | 
| Cow position: | chr6:52478308-52478777 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 71 | 
| Conread position: | 163-607 | 
| Cow position: | chr6:65871138-65870688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 57 | 
| Conread position: | 252-588 | 
| Cow position: | chr6:16738037-16737703 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 93 | 
| Conread position: | 255-485 | 
| Cow position: | chr6:60442432-60442204 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 50, 78 | 
| Conread position: | 275-580 | 
| Cow position: | chr6:21587424-21587731 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 28, 66 | 
| Conread position: | 154-498 | 
| Cow position: | chr7:3256233-3256569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 94, 66 | 
| Conread position: | 155-422 | 
| Cow position: | chr7:9781613-9781881 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 150, 65 | 
| Conread position: | 155-508 | 
| Cow position: | chr7:40008940-40008582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 72 | 
| Conread position: | 155-509 | 
| Cow position: | chr7:63378505-63378156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 94, 62 | 
| Conread position: | 155-529 | 
| Cow position: | chr7:8812826-8813180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 150, 66 | 
| Conread position: | 155-536 | 
| Cow position: | chr7:44496460-44496827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 385 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 88, 66 | 
| Conread position: | 155-570 | 
| Cow position: | chr7:64268883-64269280 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 190, 63 | 
| Conread position: | 155-573 | 
| Cow position: | chr7:53097702-53097295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 94, 65 | 
| Conread position: | 155-594 | 
| Cow position: | chr7:8877991-8877555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 107, 65 | 
| Conread position: | 155-604 | 
| Cow position: | chr7:39939847-39939408 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 65 | 
| Conread position: | 155-605 | 
| Cow position: | chr7:19466139-19466594 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 150, 65 | 
| Conread position: | 155-628 | 
| Cow position: | chr7:37569160-37568670 (view UCSC Genome Browser custom track) | 
| Alignm length: | 493 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 98 | 
| Conread position: | 155-632 | 
| Cow position: | chr7:47547520-47547032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 493 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 150, 63 | 
| Conread position: | 156-619 | 
| Cow position: | chr7:32894138-32894601 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 71 | 
| Conread position: | 160-414 | 
| Cow position: | chr7:42593172-42593414 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 68, 0 | 
| Conread position: | 160-436 | 
| Cow position: | chr7:46818388-46818660 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 89, 60 | 
| Conread position: | 160-442 | 
| Cow position: | chr7:20168656-20168385 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 143, 62 | 
| Conread position: | 160-456 | 
| Cow position: | chr7:48714960-48714665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 196, 68 | 
| Conread position: | 160-476 | 
| Cow position: | chr7:50066010-50066316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 84, 68 | 
| Conread position: | 160-485 | 
| Cow position: | chr7:48406387-48406713 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 15, 21 | 
| Conread position: | 160-508 | 
| Cow position: | chr7:39416016-39415669 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 68 | 
| Conread position: | 160-536 | 
| Cow position: | chr7:47931690-47932060 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 189, 54 | 
| Conread position: | 160-547 | 
| Cow position: | chr7:48243778-48243404 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 147, 68 | 
| Conread position: | 160-604 | 
| Cow position: | chr7:28917197-28916744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 84, 59 | 
| Conread position: | 160-605 | 
| Cow position: | chr7:2923754-2923309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 70 | 
| Conread position: | 160-605 | 
| Cow position: | chr7:20534978-20534549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 71 | 
| Conread position: | 160-605 | 
| Cow position: | chr7:23568630-23569073 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 42 | 
| Conread position: | 160-605 | 
| Cow position: | chr7:36665431-36664996 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 63 | 
| Conread position: | 160-605 | 
| Cow position: | chr7:62793903-62793451 (view UCSC Genome Browser custom track) | 
| Alignm length: | 459 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 47, 186 | 
| Conread position: | 160-646 | 
| Cow position: | chr7:53053297-53053766 (view UCSC Genome Browser custom track) | 
| Alignm length: | 496 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 60 | 
| Conread position: | 160-655 | 
| Cow position: | chr7:35274974-35275451 (view UCSC Genome Browser custom track) | 
| Alignm length: | 500 | 
| Alignm identity: | 351 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 23 | 
| Conread position: | 242-612 | 
| Cow position: | chr7:12212573-12212954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 8, 40 | 
| Conread position: | 253-607 | 
| Cow position: | chr7:34979401-34979034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 52, 92 | 
| Conread position: | 256-632 | 
| Cow position: | chr7:39401974-39401598 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 92 | 
| Conread position: | 264-464 | 
| Cow position: | chr7:12201916-12202106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 41, 84 | 
| Conread position: | 264-510 | 
| Cow position: | chr7:29010390-29010631 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 99, 82 | 
| Conread position: | 304-521 | 
| Cow position: | chr7:11160032-11160250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 59, 37 | 
| Conread position: | 96-436 | 
| Cow position: | chr8:8189926-8190262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 21, 29 | 
| Conread position: | 149-469 | 
| Cow position: | chr8:35991136-35990818 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 156, 79 | 
| Conread position: | 152-621 | 
| Cow position: | chr8:6531496-6531046 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 153, 76 | 
| Conread position: | 153-628 | 
| Cow position: | chr8:32620901-32621385 (view UCSC Genome Browser custom track) | 
| Alignm length: | 488 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 179 | 
| Conread position: | 154-474 | 
| Cow position: | chr8:59131324-59131633 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 89, 67 | 
| Conread position: | 154-482 | 
| Cow position: | chr8:9315983-9315669 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 95, 66 | 
| Conread position: | 155-486 | 
| Cow position: | chr8:41627036-41627366 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 8.99999e-40 | 
| Alignm gaps (pig, cow): | 150, 68 | 
| Conread position: | 155-536 | 
| Cow position: | chr8:38356777-38357145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 387 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 150, 74 | 
| Conread position: | 155-562 | 
| Cow position: | chr8:38572189-38572598 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 28 | 
| Conread position: | 155-582 | 
| Cow position: | chr8:21220233-21219810 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 189, 68 | 
| Conread position: | 155-602 | 
| Cow position: | chr8:12795904-12795445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 464 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 158, 65 | 
| Conread position: | 155-607 | 
| Cow position: | chr8:17199352-17199804 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 150, 65 | 
| Conread position: | 156-455 | 
| Cow position: | chr8:4500571-4500275 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 150, 64 | 
| Conread position: | 160-399 | 
| Cow position: | chr8:19011720-19011956 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 160-403 | 
| Cow position: | chr8:55897739-55897970 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 156, 68 | 
| Conread position: | 160-424 | 
| Cow position: | chr8:19980005-19980262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 173, 60 | 
| Conread position: | 160-447 | 
| Cow position: | chr8:6484856-6485141 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 84, 68 | 
| Conread position: | 160-454 | 
| Cow position: | chr8:24328780-24329059 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 202, 54 | 
| Conread position: | 160-496 | 
| Cow position: | chr8:24867667-24868001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 69 | 
| Conread position: | 160-510 | 
| Cow position: | chr8:36249343-36249687 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 88, 60 | 
| Conread position: | 160-525 | 
| Cow position: | chr8:8986870-8987224 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 89, 60 | 
| Conread position: | 160-537 | 
| Cow position: | chr8:28987774-28987424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 89, 75 | 
| Conread position: | 160-594 | 
| Cow position: | chr8:48527891-48528312 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 140, 70 | 
| Conread position: | 160-603 | 
| Cow position: | chr8:18049669-18049241 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 184, 60 | 
| Conread position: | 160-617 | 
| Cow position: | chr8:59250804-59250356 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 83, 70 | 
| Conread position: | 161-535 | 
| Cow position: | chr8:10970908-10970533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 83, 67 | 
| Conread position: | 246-470 | 
| Cow position: | chr8:19818130-19818350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 54, 86 | 
| Conread position: | 254-489 | 
| Cow position: | chr8:20080083-20080314 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 18, 8 | 
| Conread position: | 257-600 | 
| Cow position: | chr8:44000507-44000842 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 106, 60 | 
| Conread position: | 149-495 | 
| Cow position: | chr9:17872156-17871814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 100, 71 | 
| Conread position: | 154-444 | 
| Cow position: | chr9:3186085-3186385 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 89, 66 | 
| Conread position: | 155-432 | 
| Cow position: | chr9:6338753-6339032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 107, 65 | 
| Conread position: | 155-536 | 
| Cow position: | chr9:52689651-52689292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 152, 65 | 
| Conread position: | 155-556 | 
| Cow position: | chr9:21030268-21030672 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 106, 68 | 
| Conread position: | 155-604 | 
| Cow position: | chr9:52505346-52504901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 150, 66 | 
| Conread position: | 155-605 | 
| Cow position: | chr9:647737-648177 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 150, 65 | 
| Conread position: | 156-552 | 
| Cow position: | chr9:34286760-34287137 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 88, 72 | 
| Conread position: | 158-604 | 
| Cow position: | chr9:22443664-22443211 (view UCSC Genome Browser custom track) | 
| Alignm length: | 463 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 160-430 | 
| Cow position: | chr9:48627993-48628260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 100, 70 | 
| Conread position: | 160-479 | 
| Cow position: | chr9:34374959-34374652 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 138, 62 | 
| Conread position: | 160-481 | 
| Cow position: | chr9:24887171-24887477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 160-491 | 
| Cow position: | chr9:59013374-59013045 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 32, 47 | 
| Conread position: | 160-507 | 
| Cow position: | chr9:45285570-45285225 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 69 | 
| Conread position: | 160-517 | 
| Cow position: | chr9:26345003-26344669 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 68, 0 | 
| Conread position: | 160-517 | 
| Cow position: | chr9:54681474-54681817 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 58, 83 | 
| Conread position: | 160-536 | 
| Cow position: | chr9:13169698-13169338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 143, 68 | 
| Conread position: | 160-551 | 
| Cow position: | chr9:4268017-4267643 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 160-576 | 
| Cow position: | chr9:34958091-34957677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 69 | 
| Conread position: | 160-621 | 
| Cow position: | chr9:28747555-28747105 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 60 | 
| Conread position: | 165-549 | 
| Cow position: | chr9:5441959-5442337 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 111, 64 | 
| Conread position: | 312-630 | 
| Cow position: | chr9:62400065-62400386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 9, 22 | 
| Conread position: | 149-489 | 
| Cow position: | chrX:9201650-9201315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 5e-37 | 
| Alignm gaps (pig, cow): | 156, 79 | 
| Conread position: | 154-527 | 
| Cow position: | chrX:17726072-17725708 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 74 | 
| Conread position: | 154-605 | 
| Cow position: | chrX:31948838-31949278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 190, 66 | 
| Conread position: | 155-487 | 
| Cow position: | chrX:21642386-21642708 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 150, 65 | 
| Conread position: | 155-489 | 
| Cow position: | chrX:6278402-6278738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 104, 65 | 
| Conread position: | 155-604 | 
| Cow position: | chrX:1055285-1055740 (view UCSC Genome Browser custom track) | 
| Alignm length: | 469 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 123 | 
| Conread position: | 155-604 | 
| Cow position: | chrX:40826655-40827094 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 150, 65 | 
| Conread position: | 155-607 | 
| Cow position: | chrX:11844145-11844587 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 112 | 
| Conread position: | 156-466 | 
| Cow position: | chrX:45846196-45845886 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 66, 60 | 
| Conread position: | 156-621 | 
| Cow position: | chrX:37232502-37232047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 149, 64 | 
| Conread position: | 156-627 | 
| Cow position: | chrX:42469846-42470308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 479 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 73 | 
| Conread position: | 160-398 | 
| Cow position: | chrX:34314115-34313889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 145, 70 | 
| Conread position: | 160-407 | 
| Cow position: | chrX:20584419-20584169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 97, 60 | 
| Conread position: | 160-448 | 
| Cow position: | chrX:31312120-31311835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 4.2039e-45 | 
| Alignm gaps (pig, cow): | 105, 59 | 
| Conread position: | 160-451 | 
| Cow position: | chrX:33000996-33000710 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 97, 60 | 
| Conread position: | 160-453 | 
| Cow position: | chrX:40809784-40809491 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 89, 57 | 
| Conread position: | 160-459 | 
| Cow position: | chrX:29544786-29545081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 84, 54 | 
| Conread position: | 160-471 | 
| Cow position: | chrX:34411937-34411625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 84, 68 | 
| Conread position: | 160-546 | 
| Cow position: | chrX:45414213-45414589 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 196, 68 | 
| Conread position: | 160-571 | 
| Cow position: | chrX:7646342-7645944 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 149, 60 | 
| Conread position: | 160-571 | 
| Cow position: | chrX:33640066-33639654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 82 | 
| Conread position: | 160-588 | 
| Cow position: | chrX:26493097-26492670 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 57 | 
| Conread position: | 160-605 | 
| Cow position: | chrX:9252072-9252522 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 68 | 
| Conread position: | 160-605 | 
| Cow position: | chrX:31436565-31436132 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 59 | 
| Conread position: | 160-605 | 
| Cow position: | chrX:33855128-33855588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 469 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 60, 183 | 
| Conread position: | 160-612 | 
| Cow position: | chrX:878289-878724 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 60 | 
| Conread position: | 161-442 | 
| Cow position: | chrX:36068105-36067835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 83, 67 | 
| Conread position: | 161-456 | 
| Cow position: | chrX:1499755-1499471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 27, 21 | 
| Conread position: | 161-477 | 
| Cow position: | chrX:29601738-29602053 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 144, 59 | 
| Conread position: | 161-496 | 
| Cow position: | chrX:11938843-11939163 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 49, 71 | 
| Conread position: | 231-495 | 
| Cow position: | chrX:41166939-41167202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 11, 21 | 
| Conread position: | 253-497 | 
| Cow position: | chrX:9855299-9855060 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 110, 35 | 
| Conread position: | 260-612 | 
| Cow position: | chrX:19019110-19019446 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 22, 104 | 
