Cow genome map

Conread name: Lym2-sn61_H07.f

Conread position: 32-206
Cow position: chr1:81471560-81471386 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 123
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 40, 133

Conread position: 58-196
Cow position: chr1:96362244-96362385 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 32, 13

Conread position: 65-212
Cow position: chr1:78066358-78066512 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 75-240
Cow position: chr1:19304733-19304565 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 12, 104

Conread position: 77-222
Cow position: chr1:80336088-80336234 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 10, 19

Conread position: 82-241
Cow position: chr1:52039799-52039630 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 29, 115

Conread position: 83-195
Cow position: chr1:84787426-84787312 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 101
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 83-241
Cow position: chr1:64113635-64113799 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 83-244
Cow position: chr1:37321846-37322008 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 108

Conread position: 84-240
Cow position: chr1:97090485-97090319 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 7, 143

Conread position: 87-239
Cow position: chr1:6972677-6972520 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 87-241
Cow position: chr1:85339538-85339385 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 114

Conread position: 88-183
Cow position: chr1:100552126-100552029 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 88
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 88-194
Cow position: chr1:37470651-37470544 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 98

Conread position: 88-195
Cow position: chr1:31627998-31627891 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 29, 80

Conread position: 88-195
Cow position: chr1:72011662-72011771 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 88-205
Cow position: chr1:87934120-87934239 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 10

Conread position: 88-206
Cow position: chr1:52370021-52370140 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 104

Conread position: 88-206
Cow position: chr1:54478476-54478360 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 88-206
Cow position: chr1:61011335-61011212 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 88-213
Cow position: chr1:34159988-34159859 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 88-223
Cow position: chr1:20537362-20537219 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 88-240
Cow position: chr1:51860404-51860568 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 88-240
Cow position: chr1:69264957-69264803 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 137, 0

Conread position: 88-241
Cow position: chr1:78838947-78838788 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 88-241
Cow position: chr1:86340319-86340472 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 8

Conread position: 89-239
Cow position: chr1:42868786-42868942 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 134

Conread position: 90-207
Cow position: chr1:39224781-39224896 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 90-216
Cow position: chr1:70044502-70044376 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 107
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 113

Conread position: 90-222
Cow position: chr1:81638700-81638563 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 90-239
Cow position: chr1:72105561-72105406 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 126

Conread position: 90-240
Cow position: chr1:82880789-82880639 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 126, 25

Conread position: 90-240
Cow position: chr1:97611506-97611667 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 93-223
Cow position: chr1:63905109-63905245 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 95-240
Cow position: chr1:4291308-4291159 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 98-197
Cow position: chr1:41022558-41022459 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 98-205
Cow position: chr1:22828431-22828538 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 98-222
Cow position: chr1:25021936-25022060 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 98-241
Cow position: chr1:41027214-41027067 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 98-241
Cow position: chr1:81481243-81481390 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 119, 0

Conread position: 98-241
Cow position: chr1:93044156-93044013 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 113, 119

Conread position: 98-243
Cow position: chr1:11729314-11729165 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 119, 0

Conread position: 102-201
Cow position: chr1:53402916-53402817 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 102-206
Cow position: chr1:67539694-67539591 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 102-213
Cow position: chr1:45673889-45673778 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 102-220
Cow position: chr1:23372993-23372876 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 102-222
Cow position: chr1:54157431-54157311 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 102-240
Cow position: chr1:43352521-43352661 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 102-240
Cow position: chr1:54258701-54258560 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 115, 64

Conread position: 102-240
Cow position: chr1:95153006-95152864 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 117, 0

Conread position: 102-240
Cow position: chr1:100474369-100474227 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 102-240
Cow position: chr1:101280603-101280741 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 126, 102

Conread position: 104-240
Cow position: chr1:22824038-22823898 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 115, 0

Conread position: 105-206
Cow position: chr1:94823260-94823361 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 108-220
Cow position: chr1:84768750-84768862 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-196
Cow position: chr1:45873942-45874029 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 76
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-206
Cow position: chr1:69411569-69411666 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-206
Cow position: chr1:78697644-78697741 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-213
Cow position: chr1:874782-874678 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-213
Cow position: chr1:22461110-22461214 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 109-213
Cow position: chr1:72813744-72813640 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-222
Cow position: chr1:43148417-43148530 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-222
Cow position: chr1:55230104-55229991 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-222
Cow position: chr1:57359590-57359477 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-223
Cow position: chr1:98556991-98557107 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 109-233
Cow position: chr1:6731308-6731180 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 109-239
Cow position: chr1:5597083-5597214 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 109-239
Cow position: chr1:45315508-45315642 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 109-240
Cow position: chr1:42178873-42178738 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 109-240
Cow position: chr1:43311643-43311779 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 109-240
Cow position: chr1:55428828-55428964 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 109-240
Cow position: chr1:68672474-68672604 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 109-240
Cow position: chr1:72068706-72068842 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 109-240
Cow position: chr1:81580305-81580171 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 108, 80

Conread position: 109-240
Cow position: chr1:85549951-85550085 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 110, 14

Conread position: 109-240
Cow position: chr1:95835670-95835805 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 109-241
Cow position: chr1:43388924-43389056 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 93, 108

Conread position: 109-241
Cow position: chr1:87197948-87197812 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 109-241
Cow position: chr1:95974527-95974392 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 106, 9

Conread position: 109-241
Cow position: chr1:98512054-98511919 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 106, 33

Conread position: 109-243
Cow position: chr1:32014324-32014188 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 95, 0

Conread position: 109-243
Cow position: chr1:95153350-95153213 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 112, 0

Conread position: 110-196
Cow position: chr1:76080932-76080848 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 110-223
Cow position: chr1:47886353-47886467 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 103, 0

Conread position: 111-243
Cow position: chr1:81613515-81613379 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 106, 0

Conread position: 111-243
Cow position: chr1:88913445-88913310 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 103, 71

Conread position: 112-213
Cow position: chr1:46100715-46100816 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 112-240
Cow position: chr1:98576172-98576040 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 105, 0

Conread position: 113-213
Cow position: chr1:31630163-31630263 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 114-202
Cow position: chr1:77685858-77685946 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 78
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 114-240
Cow position: chr1:75250233-75250108 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 115-196
Cow position: chr1:731851-731932 (view UCSC Genome Browser custom track)
Alignm length: 82
Alignm identity: 74
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 115-212
Cow position: chr1:42775032-42774935 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 115-241
Cow position: chr1:48206414-48206539 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 118-237
Cow position: chr1:100706245-100706127 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 119-241
Cow position: chr1:19515501-19515627 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 353-507
Cow position: chr1:61560805-61560648 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 73-241
Cow position: chr10:6665419-6665590 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 148

Conread position: 82-213
Cow position: chr10:4311300-4311167 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 83-241
Cow position: chr10:53076239-53076076 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 84-241
Cow position: chr10:39228270-39228110 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 130, 18

Conread position: 84-241
Cow position: chr10:53674949-53674788 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 130, 0

Conread position: 85-196
Cow position: chr10:7089473-7089358 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 85-240
Cow position: chr10:47690509-47690351 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 34

Conread position: 87-240
Cow position: chr10:41676284-41676448 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 77

Conread position: 87-240
Cow position: chr10:61509816-61509980 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 87-241
Cow position: chr10:6384656-6384493 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 87-241
Cow position: chr10:25822123-25822282 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 105, 83

Conread position: 87-241
Cow position: chr10:34661200-34661361 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 94

Conread position: 88-188
Cow position: chr10:51289374-51289269 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 88-196
Cow position: chr10:15425165-15425061 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 93
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 88-196
Cow position: chr10:54548632-54548524 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 80

Conread position: 88-206
Cow position: chr10:4109708-4109590 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 29, 41

Conread position: 88-206
Cow position: chr10:64285670-64285793 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 88-213
Cow position: chr10:37708896-37709022 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 88-222
Cow position: chr10:58149040-58149184 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 88-241
Cow position: chr10:9656395-9656560 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 90-195
Cow position: chr10:15871753-15871860 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 93
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 90-213
Cow position: chr10:17448078-17448204 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 93-240
Cow position: chr10:16944589-16944435 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 97-213
Cow position: chr10:65359814-65359698 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 98-213
Cow position: chr10:47159324-47159209 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 98-240
Cow position: chr10:37426024-37426170 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 119, 0

Conread position: 98-241
Cow position: chr10:17149994-17149842 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 102-206
Cow position: chr10:39258389-39258493 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 53

Conread position: 102-213
Cow position: chr10:9578853-9578964 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 102-238
Cow position: chr10:15868357-15868217 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 127, 0

Conread position: 102-240
Cow position: chr10:48316842-48316983 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 103-222
Cow position: chr10:48377294-48377412 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 109-195
Cow position: chr10:31265956-31266042 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-196
Cow position: chr10:33462287-33462374 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-213
Cow position: chr10:41760223-41760326 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 109-239
Cow position: chr10:4184294-4184160 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 109-239
Cow position: chr10:52278823-52278689 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 109-240
Cow position: chr10:23127888-23128023 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 109-240
Cow position: chr10:28395203-28395339 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 109-240
Cow position: chr10:50042701-50042571 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 107, 0

Conread position: 109-240
Cow position: chr10:54848876-54848745 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 104, 108

Conread position: 109-241
Cow position: chr10:2857145-2857010 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 108, 61

Conread position: 109-241
Cow position: chr10:21422063-21422194 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 34

Conread position: 109-241
Cow position: chr10:29252262-29252130 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 90, 76

Conread position: 109-241
Cow position: chr10:37295574-37295710 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 110-241
Cow position: chr10:5151444-5151309 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 70

Conread position: 111-240
Cow position: chr10:34660146-34660279 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 111-241
Cow position: chr10:15817698-15817829 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 54

Conread position: 111-242
Cow position: chr10:30787532-30787661 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 113-213
Cow position: chr10:20485465-20485565 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 113-239
Cow position: chr10:49168940-49169071 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 114-201
Cow position: chr10:58736872-58736959 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 117-206
Cow position: chr10:30836946-30837035 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 77
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 118-241
Cow position: chr10:36002287-36002162 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 119-240
Cow position: chr10:49253451-49253330 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 52-201
Cow position: chr11:34623331-34623183 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 24

Conread position: 68-196
Cow position: chr11:35276414-35276287 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 29, 50

Conread position: 71-212
Cow position: chr11:63478519-63478379 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 110

Conread position: 86-240
Cow position: chr11:29946785-29946944 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 20, 7

Conread position: 87-212
Cow position: chr11:62483835-62483960 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 87-241
Cow position: chr11:897806-897642 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 87-241
Cow position: chr11:18447362-18447523 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 137

Conread position: 88-213
Cow position: chr11:58186010-58185883 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 88-213
Cow position: chr11:80586404-80586275 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 88-238
Cow position: chr11:17227513-17227670 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 136

Conread position: 88-240
Cow position: chr11:49934605-49934761 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 88-240
Cow position: chr11:73353929-73354090 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 89-238
Cow position: chr11:45631643-45631788 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 90-196
Cow position: chr11:9699025-9698916 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 90-206
Cow position: chr11:63485068-63484945 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 90-222
Cow position: chr11:15366842-15366981 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 90-240
Cow position: chr11:51729410-51729256 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 90-244
Cow position: chr11:66041408-66041250 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 24, 144

Conread position: 93-240
Cow position: chr11:62663108-62663262 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 131

Conread position: 94-197
Cow position: chr11:1142716-1142821 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 97-195
Cow position: chr11:68570266-68570362 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 98-206
Cow position: chr11:35669837-35669944 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 98-206
Cow position: chr11:61178473-61178365 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 98-213
Cow position: chr11:39462739-39462624 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 98-240
Cow position: chr11:64409086-64408946 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 104, 80

Conread position: 102-206
Cow position: chr11:18508919-18509024 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 102-206
Cow position: chr11:70600717-70600821 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 102-211
Cow position: chr11:6320021-6320130 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 102-213
Cow position: chr11:34136352-34136241 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 102-240
Cow position: chr11:62889782-62889924 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 102-240
Cow position: chr11:84385527-84385667 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 108-240
Cow position: chr11:81931011-81931142 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 108, 90

Conread position: 109-198
Cow position: chr11:80596442-80596352 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 109-213
Cow position: chr11:40478748-40478852 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-213
Cow position: chr11:46884478-46884374 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-213
Cow position: chr11:60720351-60720455 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 109-213
Cow position: chr11:67312885-67312781 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-234
Cow position: chr11:62778546-62778420 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 109-239
Cow position: chr11:44636650-44636783 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 108, 17

Conread position: 109-241
Cow position: chr11:3714925-3714794 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 109-241
Cow position: chr11:41293713-41293849 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 105, 0

Conread position: 109-241
Cow position: chr11:58173729-58173594 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 105, 80

Conread position: 109-241
Cow position: chr11:69119399-69119262 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 110-240
Cow position: chr11:13500120-13499987 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 110-240
Cow position: chr11:83230297-83230430 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 113-196
Cow position: chr11:77241805-77241722 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 74
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 113-239
Cow position: chr11:76835524-76835654 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 114-206
Cow position: chr11:37982478-37982570 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 116-212
Cow position: chr11:46452233-46452137 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 374-507
Cow position: chr11:16342312-16342177 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 83-240
Cow position: chr12:30210591-30210432 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 132, 32

Conread position: 83-241
Cow position: chr12:18577948-18577787 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 78, 40

Conread position: 84-240
Cow position: chr12:25805022-25805182 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 84-241
Cow position: chr12:6484248-6484088 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 31, 136

Conread position: 85-241
Cow position: chr12:39465684-39465527 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 107, 31

Conread position: 87-238
Cow position: chr12:7110304-7110148 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 88-194
Cow position: chr12:34161520-34161412 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 88-195
Cow position: chr12:6666677-6666568 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 89-240
Cow position: chr12:18103502-18103660 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 89-240
Cow position: chr12:23916954-23916795 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 22, 136

Conread position: 90-195
Cow position: chr12:24023697-24023804 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 90-240
Cow position: chr12:3616097-3615951 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 91-196
Cow position: chr12:24391425-24391316 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 96-240
Cow position: chr12:24116265-24116413 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 47

Conread position: 96-241
Cow position: chr12:17252102-17252250 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 98-218
Cow position: chr12:45782321-45782201 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 102-187
Cow position: chr12:22859554-22859469 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 76
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 102-239
Cow position: chr12:7457454-7457593 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 102-240
Cow position: chr12:6410643-6410786 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 107-276
Cow position: chr12:26147084-26147246 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 117, 0

Conread position: 109-195
Cow position: chr12:41159671-41159585 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 109-200
Cow position: chr12:2241747-2241838 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 78
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-213
Cow position: chr12:5635369-5635473 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-236
Cow position: chr12:43854977-43854847 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 104, 89

Conread position: 109-238
Cow position: chr12:4797383-4797251 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 110, 14

Conread position: 109-239
Cow position: chr12:30605082-30605215 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 61

Conread position: 109-240
Cow position: chr12:3675445-3675578 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 110, 34

Conread position: 109-240
Cow position: chr12:4866901-4866766 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 106, 0

Conread position: 109-240
Cow position: chr12:7920326-7920191 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 109-240
Cow position: chr12:15163223-15163089 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 109-240
Cow position: chr12:26749868-26750003 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 110, 0

Conread position: 109-241
Cow position: chr12:27037366-27037502 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 109-241
Cow position: chr12:37993648-37993784 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 110-213
Cow position: chr12:23912928-23913031 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 110-241
Cow position: chr12:44733009-44733144 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 111-240
Cow position: chr12:42181047-42181180 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 114-213
Cow position: chr12:16386378-16386477 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 114-223
Cow position: chr12:35368721-35368612 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 350-506
Cow position: chr12:45820494-45820336 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 113
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 52-240
Cow position: chr13:12206855-12207046 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 37, 67

Conread position: 66-213
Cow position: chr13:84398-84545 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 7

Conread position: 81-241
Cow position: chr13:20473852-20473683 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 85-213
Cow position: chr13:21277628-21277500 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 87-205
Cow position: chr13:21242245-21242125 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 87-213
Cow position: chr13:16790044-16790176 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 88-190
Cow position: chr13:5659933-5659823 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 88-206
Cow position: chr13:14576047-14576173 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 88-230
Cow position: chr13:43829084-43829228 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 88-238
Cow position: chr13:42200452-42200615 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 88-240
Cow position: chr13:10522771-10522932 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 121

Conread position: 88-240
Cow position: chr13:20519903-20520059 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 131, 0

Conread position: 88-240
Cow position: chr13:23270359-23270211 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 125, 24

Conread position: 88-240
Cow position: chr13:24715081-24715240 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 88-240
Cow position: chr13:51116183-51116026 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 88-241
Cow position: chr13:5263447-5263282 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 88-243
Cow position: chr13:11643781-11643940 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 129, 0

Conread position: 90-196
Cow position: chr13:6079569-6079462 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 90-202
Cow position: chr13:16163420-16163538 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 90-205
Cow position: chr13:55775199-55775319 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 59

Conread position: 90-222
Cow position: chr13:7046714-7046847 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 90-241
Cow position: chr13:24753727-24753886 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 90-243
Cow position: chr13:16020693-16020852 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 93-241
Cow position: chr13:17745095-17745242 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 124, 82

Conread position: 93-243
Cow position: chr13:56686278-56686432 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 128

Conread position: 94-223
Cow position: chr13:8393052-8392920 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 98-222
Cow position: chr13:30148711-30148587 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 98-241
Cow position: chr13:14644903-14645050 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 98-241
Cow position: chr13:15289069-15288926 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 115, 119

Conread position: 102-196
Cow position: chr13:8667475-8667569 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 102-222
Cow position: chr13:60509264-60509144 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 102-238
Cow position: chr13:50768455-50768592 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 102-239
Cow position: chr13:52055736-52055595 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 117, 0

Conread position: 102-240
Cow position: chr13:37593091-37592948 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 109-195
Cow position: chr13:25521052-25520966 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 79
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 109-196
Cow position: chr13:15808631-15808716 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 80
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 109-206
Cow position: chr13:3211412-3211509 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 109-206
Cow position: chr13:6975982-6975885 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-206
Cow position: chr13:17135351-17135253 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 109-213
Cow position: chr13:34261094-34261198 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-213
Cow position: chr13:39398514-39398618 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-223
Cow position: chr13:18172199-18172313 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-238
Cow position: chr13:21294938-21295071 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 109-240
Cow position: chr13:17813334-17813469 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 109-240
Cow position: chr13:26369387-26369521 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 102, 71

Conread position: 109-240
Cow position: chr13:42640249-42640380 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 109-240
Cow position: chr13:62007970-62008105 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 106, 0

Conread position: 109-241
Cow position: chr13:17439905-17439772 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 109

Conread position: 109-241
Cow position: chr13:18615245-18615383 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 109-241
Cow position: chr13:20666523-20666390 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 109

Conread position: 109-241
Cow position: chr13:37621494-37621361 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 109

Conread position: 109-318
Cow position: chr13:28536454-28536247 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 93, 103

Conread position: 110-213
Cow position: chr13:21188232-21188335 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 110-240
Cow position: chr13:37381665-37381799 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 109, 0

Conread position: 110-241
Cow position: chr13:17823086-17822956 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 106, 0

Conread position: 110-241
Cow position: chr13:23478894-23479029 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 99, 111

Conread position: 110-241
Cow position: chr13:23856075-23856209 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 104, 0

Conread position: 110-241
Cow position: chr13:37069209-37069344 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 111-240
Cow position: chr13:10929123-10928995 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 111-240
Cow position: chr13:36771555-36771426 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 108, 40

Conread position: 113-240
Cow position: chr13:7076124-7076253 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 113-241
Cow position: chr13:19278962-19279093 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 0

Conread position: 114-196
Cow position: chr13:6113658-6113576 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 75
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 115-239
Cow position: chr13:24230083-24230211 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 344-507
Cow position: chr13:24586121-24585963 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 346-507
Cow position: chr13:55316111-55316275 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 117
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 43-193
Cow position: chr14:24387288-24387445 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 81-213
Cow position: chr14:12924185-12924322 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 7, 79

Conread position: 81-241
Cow position: chr14:10078160-10078324 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 25

Conread position: 84-241
Cow position: chr14:41837978-41837816 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 87-190
Cow position: chr14:2712124-2712021 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 87-240
Cow position: chr14:2038906-2038753 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 130, 31

Conread position: 87-241
Cow position: chr14:1431937-1431776 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 88-195
Cow position: chr14:44084588-44084483 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 88-213
Cow position: chr14:33247532-33247405 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 107
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 88-218
Cow position: chr14:19349736-19349865 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 88-238
Cow position: chr14:36425516-36425358 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 88-240
Cow position: chr14:39037127-39037276 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 128, 21

Conread position: 88-240
Cow position: chr14:40754356-40754192 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 90-195
Cow position: chr14:40806709-40806605 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 92
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 90-209
Cow position: chr14:13809844-13809960 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 90-213
Cow position: chr14:3173836-3173713 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 90-238
Cow position: chr14:18309410-18309254 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 92-240
Cow position: chr14:46997944-46998094 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 137, 17

Conread position: 93-235
Cow position: chr14:19188943-19189094 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 93-241
Cow position: chr14:19487197-19487351 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 93-242
Cow position: chr14:36775556-36775707 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 106, 125

Conread position: 100-206
Cow position: chr14:27303569-27303675 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 102-213
Cow position: chr14:8083112-8083222 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 102-223
Cow position: chr14:35381505-35381624 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 102-231
Cow position: chr14:4209419-4209548 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 102-240
Cow position: chr14:28924081-28924223 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 117, 0

Conread position: 102-240
Cow position: chr14:34399885-34399743 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 102-240
Cow position: chr14:34449058-34448916 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 102-244
Cow position: chr14:28465302-28465161 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 105
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 126, 0

Conread position: 104-240
Cow position: chr14:22941813-22941673 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 115, 0

Conread position: 109-196
Cow position: chr14:40952191-40952278 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 76
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-206
Cow position: chr14:38144187-38144090 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-213
Cow position: chr14:24785578-24785682 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-222
Cow position: chr14:37436790-37436677 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-238
Cow position: chr14:42436945-42437076 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 106, 0

Conread position: 109-240
Cow position: chr14:19129426-19129561 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 109-240
Cow position: chr14:33830222-33830356 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 110, 81

Conread position: 109-240
Cow position: chr14:37883996-37883861 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 109-241
Cow position: chr14:18301880-18302017 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 109-241
Cow position: chr14:45577172-45577036 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 110-243
Cow position: chr14:19863513-19863375 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 111-196
Cow position: chr14:25912573-25912658 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 75
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 111-241
Cow position: chr14:1646262-1646130 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 114-213
Cow position: chr14:18270286-18270385 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 114-239
Cow position: chr14:25903456-25903585 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 115-241
Cow position: chr14:4848274-4848403 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 99, 0

Conread position: 374-505
Cow position: chr14:41749655-41749784 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 25-217
Cow position: chr15:33976810-33976620 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 28, 23

Conread position: 76-241
Cow position: chr15:13669927-13669760 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 44

Conread position: 83-195
Cow position: chr15:31024931-31025046 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 83-213
Cow position: chr15:42190385-42190516 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 12, 109

Conread position: 83-240
Cow position: chr15:16543511-16543345 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 81, 47

Conread position: 83-240
Cow position: chr15:30981881-30982041 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 34

Conread position: 85-241
Cow position: chr15:16822880-16823038 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 78

Conread position: 87-196
Cow position: chr15:26851290-26851176 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 87-207
Cow position: chr15:1722907-1722785 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 87-239
Cow position: chr15:38827381-38827223 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 88-202
Cow position: chr15:5408959-5408837 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 90-195
Cow position: chr15:23798585-23798477 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 90-196
Cow position: chr15:14880395-14880289 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 84

Conread position: 90-196
Cow position: chr15:36458252-36458148 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 90-222
Cow position: chr15:16230166-16230302 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 90-240
Cow position: chr15:5235055-5234899 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 27, 120

Conread position: 98-239
Cow position: chr15:47844137-47843992 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 102-240
Cow position: chr15:36793534-36793392 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 117, 0

Conread position: 102-241
Cow position: chr15:50332942-50333083 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 115, 22

Conread position: 107-244
Cow position: chr15:28924790-28924649 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 115, 0

Conread position: 108-196
Cow position: chr15:41528006-41527918 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 76
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-197
Cow position: chr15:44119500-44119412 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 76
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-206
Cow position: chr15:27900543-27900446 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-211
Cow position: chr15:35205185-35205084 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 109-212
Cow position: chr15:34223833-34223936 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-220
Cow position: chr15:26896727-26896616 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-223
Cow position: chr15:4500670-4500784 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 109-223
Cow position: chr15:20459341-20459227 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 109-223
Cow position: chr15:39316875-39316761 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-224
Cow position: chr15:12913531-12913415 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 109-234
Cow position: chr15:10049342-10049217 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 92, 108

Conread position: 109-240
Cow position: chr15:244747-244883 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 109-240
Cow position: chr15:14176532-14176397 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 109-240
Cow position: chr15:18776784-18776649 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 109-240
Cow position: chr15:39286441-39286307 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 110, 40

Conread position: 109-240
Cow position: chr15:42789181-42789046 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 109-241
Cow position: chr15:8354009-8354144 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 108, 9

Conread position: 109-241
Cow position: chr15:9465644-9465780 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 109-241
Cow position: chr15:14261290-14261156 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 109-243
Cow position: chr15:22444017-22443883 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 104, 108

Conread position: 110-241
Cow position: chr15:1857692-1857827 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 110-241
Cow position: chr15:19002312-19002173 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 111-238
Cow position: chr15:27016278-27016150 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 97
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 111-240
Cow position: chr15:31928927-31928794 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 112-213
Cow position: chr15:20488117-20488015 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 112-244
Cow position: chr15:16908403-16908539 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 113-240
Cow position: chr15:21389192-21389065 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 103, 13

Conread position: 114-213
Cow position: chr15:36388263-36388362 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 114-239
Cow position: chr15:24629393-24629264 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 114-240
Cow position: chr15:9781443-9781569 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 102, 89

Conread position: 114-240
Cow position: chr15:39621310-39621440 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 114-241
Cow position: chr15:25650438-25650310 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 47-240
Cow position: chr16:12097831-12097629 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 27

Conread position: 54-238
Cow position: chr16:7499229-7499045 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 129
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 33, 22

Conread position: 57-241
Cow position: chr16:12010267-12010082 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 158, 39

Conread position: 68-205
Cow position: chr16:10504994-10504854 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 113

Conread position: 71-240
Cow position: chr16:1415146-1415310 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 85-213
Cow position: chr16:15203221-15203350 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 86-241
Cow position: chr16:45122181-45122022 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 123, 0

Conread position: 87-238
Cow position: chr16:52834745-52834898 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 119, 39

Conread position: 87-241
Cow position: chr16:25839767-25839607 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 87-241
Cow position: chr16:32893775-32893615 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 19

Conread position: 87-241
Cow position: chr16:40333179-40333337 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 29, 73

Conread position: 87-241
Cow position: chr16:40514337-40514495 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 127, 0

Conread position: 87-243
Cow position: chr16:48095613-48095780 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 88-206
Cow position: chr16:18353812-18353932 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 88-218
Cow position: chr16:14005972-14006105 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 88-222
Cow position: chr16:51697230-51697095 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 88-240
Cow position: chr16:39165388-39165228 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 88-240
Cow position: chr16:54226460-54226609 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 127, 25

Conread position: 88-240
Cow position: chr16:56796520-56796678 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 88-245
Cow position: chr16:8018112-8017950 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 115, 0

Conread position: 90-194
Cow position: chr16:8025716-8025817 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 90-205
Cow position: chr16:4102689-4102804 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 90-237
Cow position: chr16:9836628-9836782 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 90-239
Cow position: chr16:31484513-31484673 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 51

Conread position: 90-240
Cow position: chr16:13252166-13252318 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 90-240
Cow position: chr16:29655467-29655313 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 119, 0

Conread position: 90-240
Cow position: chr16:36120843-36120995 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 129, 28

Conread position: 90-240
Cow position: chr16:37452464-37452626 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 90-240
Cow position: chr16:42340334-42340184 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 114, 23

Conread position: 90-241
Cow position: chr16:9596520-9596357 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 90-241
Cow position: chr16:10148420-10148269 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 124, 28

Conread position: 93-213
Cow position: chr16:41530157-41530281 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 93-241
Cow position: chr16:47518982-47518832 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 10

Conread position: 97-216
Cow position: chr16:45554580-45554459 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 98-196
Cow position: chr16:50569397-50569299 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 98-240
Cow position: chr16:26649495-26649641 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 119, 0

Conread position: 98-240
Cow position: chr16:48145269-48145411 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 106, 63

Conread position: 100-190
Cow position: chr16:28199160-28199070 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 77
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 102-202
Cow position: chr16:4192304-4192404 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 102-206
Cow position: chr16:11654172-11654068 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 102-206
Cow position: chr16:43758516-43758620 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 102-211
Cow position: chr16:27032706-27032597 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 102-213
Cow position: chr16:7611993-7611882 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 102-213
Cow position: chr16:33290514-33290403 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 102-238
Cow position: chr16:12220811-12220671 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 102-240
Cow position: chr16:7665767-7665625 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 102-240
Cow position: chr16:7812820-7812678 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 102-240
Cow position: chr16:43308433-43308572 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 117, 46

Conread position: 102-241
Cow position: chr16:13996066-13996208 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 104-240
Cow position: chr16:2223269-2223409 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 106-222
Cow position: chr16:45193684-45193799 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 108-196
Cow position: chr16:6319327-6319239 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 76
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-195
Cow position: chr16:23187666-23187581 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 109-213
Cow position: chr16:11922905-11923009 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 10

Conread position: 109-217
Cow position: chr16:33135060-33134952 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 86
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-217
Cow position: chr16:46552916-46552809 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 109-222
Cow position: chr16:28444367-28444480 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-223
Cow position: chr16:12939743-12939630 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 109-240
Cow position: chr16:15960167-15960302 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 109-241
Cow position: chr16:4910402-4910538 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 109-241
Cow position: chr16:33198316-33198450 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 109-241
Cow position: chr16:33646139-33646002 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 113

Conread position: 109-243
Cow position: chr16:30358940-30359078 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 110, 0

Conread position: 110-196
Cow position: chr16:48099582-48099496 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 110-239
Cow position: chr16:8933306-8933436 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 105, 89

Conread position: 110-240
Cow position: chr16:23955710-23955844 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 109, 0

Conread position: 111-206
Cow position: chr16:48448844-48448749 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 12, 47

Conread position: 112-202
Cow position: chr16:52325479-52325569 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 77
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 112-241
Cow position: chr16:34220306-34220173 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 114-205
Cow position: chr16:9097141-9097050 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 79
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 114-246
Cow position: chr16:53086223-53086355 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 115-213
Cow position: chr16:38663594-38663691 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 115-215
Cow position: chr16:56670802-56670902 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 116-213
Cow position: chr16:44568997-44568900 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 116-284
Cow position: chr16:12324571-12324398 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 285-507
Cow position: chr16:5363745-5363971 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 11, 45

Conread position: 350-507
Cow position: chr16:17288859-17289017 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 70

Conread position: 81-240
Cow position: chr17:9932108-9932272 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 141

Conread position: 83-195
Cow position: chr17:35311721-35311607 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 31, 85

Conread position: 87-195
Cow position: chr17:42259400-42259292 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 87-213
Cow position: chr17:5422882-5423010 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 87-239
Cow position: chr17:33793352-33793195 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 135

Conread position: 87-241
Cow position: chr17:1025638-1025798 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 22, 135

Conread position: 87-241
Cow position: chr17:21039752-21039584 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 87-241
Cow position: chr17:40852163-40852000 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 87-242
Cow position: chr17:39606621-39606456 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 88-183
Cow position: chr17:38430441-38430537 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 88-195
Cow position: chr17:38736626-38736515 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 88-196
Cow position: chr17:8153156-8153265 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 88-222
Cow position: chr17:20234393-20234261 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 88-240
Cow position: chr17:1469561-1469407 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 96

Conread position: 90-195
Cow position: chr17:30108077-30107975 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 90-202
Cow position: chr17:14004011-14003895 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 90-238
Cow position: chr17:29245627-29245473 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 98-240
Cow position: chr17:26789593-26789452 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 130, 0

Conread position: 98-241
Cow position: chr17:24862632-24862485 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 115, 0

Conread position: 102-190
Cow position: chr17:25193357-25193445 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 76
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 102-197
Cow position: chr17:25095653-25095556 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 102-206
Cow position: chr17:10650282-10650179 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 102-240
Cow position: chr17:40355428-40355286 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 102-240
Cow position: chr17:43957830-43957688 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 102-241
Cow position: chr17:17180213-17180076 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 122, 0

Conread position: 102-243
Cow position: chr17:11618754-11618613 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 122, 101

Conread position: 106-241
Cow position: chr17:31037211-31037350 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 107-241
Cow position: chr17:25189450-25189316 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 119, 97

Conread position: 109-196
Cow position: chr17:12289246-12289333 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 78
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 109-206
Cow position: chr17:5344780-5344683 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-220
Cow position: chr17:34836334-34836223 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 109-222
Cow position: chr17:969046-968934 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 109-222
Cow position: chr17:35542007-35542120 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-223
Cow position: chr17:22056865-22056979 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 89
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-223
Cow position: chr17:27303806-27303921 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 109-239
Cow position: chr17:9713179-9713313 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 109-239
Cow position: chr17:20874558-20874425 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 110, 14

Conread position: 109-240
Cow position: chr17:37430342-37430477 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 109-241
Cow position: chr17:29157579-29157446 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 90, 109

Conread position: 109-241
Cow position: chr17:32989639-32989504 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 106, 123

Conread position: 109-241
Cow position: chr17:32993461-32993596 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 106, 123

Conread position: 109-243
Cow position: chr17:32138262-32138399 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 100, 14

Conread position: 110-240
Cow position: chr17:8108196-8108326 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 92, 108

Conread position: 111-240
Cow position: chr17:9911918-9911788 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 96, 107

Conread position: 111-241
Cow position: chr17:17035110-17034976 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 113-195
Cow position: chr17:21680938-21680856 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 73
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 113-241
Cow position: chr17:26072602-26072734 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 114-241
Cow position: chr17:1634334-1634465 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 103, 0

Conread position: 115-239
Cow position: chr17:25467139-25467016 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 361-507
Cow position: chr17:24824206-24824352 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 42, 55

Conread position: 61-241
Cow position: chr18:47512147-47511959 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 62-228
Cow position: chr18:53962292-53962456 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 31, 48

Conread position: 68-241
Cow position: chr18:49017629-49017458 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 19, 104

Conread position: 74-196
Cow position: chr18:38228537-38228409 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 83-241
Cow position: chr18:33300015-33299857 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 125, 40

Conread position: 83-243
Cow position: chr18:15809685-15809849 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 105

Conread position: 83-243
Cow position: chr18:52877474-52877312 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 124, 42

Conread position: 85-241
Cow position: chr18:49100261-49100415 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 107, 33

Conread position: 87-196
Cow position: chr18:44205967-44206082 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 87-213
Cow position: chr18:14586357-14586485 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 87-240
Cow position: chr18:30586114-30586267 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 126, 130

Conread position: 87-241
Cow position: chr18:44262745-44262584 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 88-194
Cow position: chr18:36098479-36098370 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 88-206
Cow position: chr18:51691345-51691470 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 88-213
Cow position: chr18:33492472-33492345 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 88-239
Cow position: chr18:20641380-20641541 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 88-240
Cow position: chr18:42427737-42427574 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 26, 5

Conread position: 88-240
Cow position: chr18:50359446-50359286 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 88-241
Cow position: chr18:18569099-18568956 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 88-243
Cow position: chr18:19849650-19849802 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 125, 48

Conread position: 90-240
Cow position: chr18:10322915-10322760 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 90-243
Cow position: chr18:48713661-48713502 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 93-241
Cow position: chr18:23630499-23630651 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 124

Conread position: 98-213
Cow position: chr18:5632368-5632253 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 98-213
Cow position: chr18:24022718-24022603 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 98-235
Cow position: chr18:12273758-12273617 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 98-240
Cow position: chr18:24759556-24759702 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 98-241
Cow position: chr18:1571137-1571282 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 98-241
Cow position: chr18:49038562-49038415 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 116, 0

Conread position: 99-222
Cow position: chr18:39460319-39460196 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 100-238
Cow position: chr18:5711555-5711694 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 124, 0

Conread position: 100-241
Cow position: chr18:18844114-18843967 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 110, 87

Conread position: 102-222
Cow position: chr18:23821736-23821856 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 102-224
Cow position: chr18:5189597-5189720 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 120, 0

Conread position: 102-240
Cow position: chr18:7359841-7359699 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 105, 120

Conread position: 102-241
Cow position: chr18:35874174-35874033 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 102-270
Cow position: chr18:23649019-23648854 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 123

Conread position: 108-213
Cow position: chr18:52589878-52589982 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 109-193
Cow position: chr18:2576611-2576695 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 74
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-196
Cow position: chr18:55123335-55123248 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-206
Cow position: chr18:47410632-47410535 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-213
Cow position: chr18:19273007-19273111 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 109-217
Cow position: chr18:24508142-24508252 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 109-222
Cow position: chr18:56159550-56159438 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 109-240
Cow position: chr18:3180500-3180365 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 103, 0

Conread position: 109-240
Cow position: chr18:16997343-16997208 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 110, 0

Conread position: 109-240
Cow position: chr18:37023461-37023596 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 109-240
Cow position: chr18:51392554-51392685 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 109-241
Cow position: chr18:21768702-21768573 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 109-241
Cow position: chr18:38687169-38687037 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 94, 104

Conread position: 109-241
Cow position: chr18:44917848-44917710 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 109-266
Cow position: chr18:11262925-11262769 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 90
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 110-238
Cow position: chr18:4624062-4624191 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 110-240
Cow position: chr18:27109204-27109338 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 109, 0

Conread position: 110-241
Cow position: chr18:28923761-28923894 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 14

Conread position: 111-241
Cow position: chr18:19883620-19883485 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 111-241
Cow position: chr18:46072550-46072416 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 113-240
Cow position: chr18:30341099-30341226 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 114-206
Cow position: chr18:27637576-27637484 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 114-240
Cow position: chr18:1954505-1954635 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 114-240
Cow position: chr18:52251773-52251903 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 92, 0

Conread position: 114-241
Cow position: chr18:50082173-50082304 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 84, 108

Conread position: 114-245
Cow position: chr18:12584755-12584890 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 115-271
Cow position: chr18:11657739-11657581 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 102, 69

Conread position: 346-503
Cow position: chr18:47511880-47512038 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 35

Conread position: 71-214
Cow position: chr19:2042233-2042093 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 7

Conread position: 83-213
Cow position: chr19:3217152-3217022 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 65

Conread position: 83-239
Cow position: chr19:15719477-15719640 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 156

Conread position: 83-240
Cow position: chr19:15091993-15092156 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 55

Conread position: 85-241
Cow position: chr19:18786186-18786346 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 87-239
Cow position: chr19:13325354-13325508 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 142, 28

Conread position: 87-239
Cow position: chr19:25763250-25763091 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 137

Conread position: 87-241
Cow position: chr19:23756607-23756767 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 87-241
Cow position: chr19:47671877-47671719 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 127, 0

Conread position: 88-196
Cow position: chr19:24224477-24224363 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 88-206
Cow position: chr19:38597210-38597084 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 88-238
Cow position: chr19:37560065-37560215 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 125, 129

Conread position: 89-241
Cow position: chr19:38500297-38500142 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 22, 131

Conread position: 90-202
Cow position: chr19:18344413-18344525 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 88
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 90-213
Cow position: chr19:5522017-5522148 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 90-213
Cow position: chr19:29958547-29958671 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 72, 28

Conread position: 90-239
Cow position: chr19:6532015-6531864 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 51

Conread position: 90-243
Cow position: chr19:24358116-24358268 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 102, 28

Conread position: 92-240
Cow position: chr19:25410715-25410866 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 128

Conread position: 93-214
Cow position: chr19:29115868-29115750 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 93-241
Cow position: chr19:39576436-39576593 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 98-240
Cow position: chr19:13121161-13121298 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 98-240
Cow position: chr19:47986982-47986835 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 98-241
Cow position: chr19:23088106-23087959 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 119, 0

Conread position: 98-241
Cow position: chr19:43413904-43413756 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 97, 20

Conread position: 102-222
Cow position: chr19:14581480-14581361 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 102-240
Cow position: chr19:8185320-8185179 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 115, 12

Conread position: 106-241
Cow position: chr19:10930304-10930441 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 109-195
Cow position: chr19:30384982-30385068 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 75
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-213
Cow position: chr19:18921131-18921235 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-213
Cow position: chr19:43373150-43373046 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 109-214
Cow position: chr19:24637341-24637236 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-222
Cow position: chr19:36845361-36845248 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 109-222
Cow position: chr19:52356364-52356250 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 109-223
Cow position: chr19:15076089-15076205 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 105, 0

Conread position: 109-240
Cow position: chr19:2220964-2221099 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 109-240
Cow position: chr19:2223992-2224120 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 109-240
Cow position: chr19:25526395-25526260 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 109-240
Cow position: chr19:34459360-34459494 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 108, 130

Conread position: 109-241
Cow position: chr19:26269123-26269253 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 109-241
Cow position: chr19:28447551-28447416 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 109-241
Cow position: chr19:34757891-34758027 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 110-209
Cow position: chr19:30886506-30886407 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 110-222
Cow position: chr19:31998163-31998275 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 88
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 110-223
Cow position: chr19:39254335-39254448 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 111-240
Cow position: chr19:23304381-23304512 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 95, 0

Conread position: 113-213
Cow position: chr19:39781627-39781527 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 114-196
Cow position: chr19:34819080-34819162 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 74
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 114-238
Cow position: chr19:34166473-34166349 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 99, 103

Conread position: 114-240
Cow position: chr19:21817069-21816943 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 102, 83

Conread position: 114-241
Cow position: chr19:3621535-3621405 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 90, 40

Conread position: 115-220
Cow position: chr19:52568370-52568475 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 119-240
Cow position: chr19:22798976-22799101 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 82-196
Cow position: chr2:38576331-38576444 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 85-240
Cow position: chr2:8821378-8821220 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 132, 17

Conread position: 87-207
Cow position: chr2:35208065-35207940 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 87-239
Cow position: chr2:17114584-17114739 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 87-240
Cow position: chr2:15250323-15250170 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 134, 31

Conread position: 87-240
Cow position: chr2:42801191-42801028 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 87-241
Cow position: chr2:44065720-44065564 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 90

Conread position: 88-195
Cow position: chr2:12558389-12558494 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 88-213
Cow position: chr2:12686639-12686771 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 88-213
Cow position: chr2:38658639-38658768 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 88-240
Cow position: chr2:21049180-21049339 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 119

Conread position: 88-240
Cow position: chr2:80177443-80177599 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 97

Conread position: 88-241
Cow position: chr2:40257262-40257425 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 88-241
Cow position: chr2:63074709-63074865 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 29, 132

Conread position: 88-243
Cow position: chr2:24530518-24530353 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 89-206
Cow position: chr2:16018092-16018206 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 89-241
Cow position: chr2:21410364-21410206 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 90-195
Cow position: chr2:4096443-4096548 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 90-196
Cow position: chr2:31123023-31122918 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 90-213
Cow position: chr2:39815143-39815265 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 90-240
Cow position: chr2:42183518-42183360 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 90-241
Cow position: chr2:38362224-38362378 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 127, 75

Conread position: 90-241
Cow position: chr2:43624387-43624547 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 93-240
Cow position: chr2:53500896-53501047 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 114, 128

Conread position: 95-240
Cow position: chr2:42255578-42255423 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 132

Conread position: 95-241
Cow position: chr2:63331667-63331817 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 13

Conread position: 97-213
Cow position: chr2:76110530-76110415 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 98-241
Cow position: chr2:17966895-17967040 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 121, 0

Conread position: 98-241
Cow position: chr2:45542265-45542412 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 119, 0

Conread position: 98-241
Cow position: chr2:46162091-46161944 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 119, 0

Conread position: 99-238
Cow position: chr2:46120509-46120650 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 103, 0

Conread position: 102-213
Cow position: chr2:46053600-46053489 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 102-215
Cow position: chr2:12186760-12186647 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 102-223
Cow position: chr2:36117379-36117258 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 102-226
Cow position: chr2:46300741-46300617 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 102-239
Cow position: chr2:53575526-53575383 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 102-240
Cow position: chr2:57776477-57776335 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 102-241
Cow position: chr2:49716959-49717101 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 115, 45

Conread position: 102-241
Cow position: chr2:54700586-54700443 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 117, 0

Conread position: 102-243
Cow position: chr2:36963652-36963512 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 118, 0

Conread position: 102-244
Cow position: chr2:3739715-3739861 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 122, 0

Conread position: 103-240
Cow position: chr2:28303448-28303307 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 103, 0

Conread position: 105-241
Cow position: chr2:549203-549340 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 94, 113

Conread position: 108-238
Cow position: chr2:69823714-69823579 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 108-240
Cow position: chr2:46971248-46971110 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 108-241
Cow position: chr2:41040586-41040719 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 118, 109

Conread position: 108-243
Cow position: chr2:39263611-39263475 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 93

Conread position: 109-196
Cow position: chr2:68328730-68328817 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 78
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 109-197
Cow position: chr2:44313596-44313684 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 79
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 109-213
Cow position: chr2:37891368-37891472 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-217
Cow position: chr2:21950098-21949990 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 109-222
Cow position: chr2:39363125-39363012 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 109-227
Cow position: chr2:64465653-64465773 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 109-230
Cow position: chr2:29394886-29395007 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-236
Cow position: chr2:80963526-80963654 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 109

Conread position: 109-239
Cow position: chr2:46188973-46189107 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 109-240
Cow position: chr2:40803124-40802992 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 108

Conread position: 109-240
Cow position: chr2:40880191-40880059 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 90, 109

Conread position: 109-240
Cow position: chr2:44025500-44025368 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 106, 92

Conread position: 109-240
Cow position: chr2:45721144-45721279 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 109-240
Cow position: chr2:64773509-64773373 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 109-240
Cow position: chr2:68870814-68870682 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 109-241
Cow position: chr2:7194331-7194198 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 107, 92

Conread position: 109-241
Cow position: chr2:15219236-15219100 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 109-241
Cow position: chr2:22042664-22042523 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 101

Conread position: 109-241
Cow position: chr2:38640446-38640310 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 109-241
Cow position: chr2:40466758-40466622 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 109-241
Cow position: chr2:71621925-71622060 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 80, 96

Conread position: 109-241
Cow position: chr2:72183368-72183505 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 109-244
Cow position: chr2:61421045-61421183 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 133

Conread position: 110-217
Cow position: chr2:39350368-39350474 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 110-241
Cow position: chr2:45784861-45784724 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 111-194
Cow position: chr2:44022971-44023054 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 74
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 111-241
Cow position: chr2:19494336-19494201 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 111-241
Cow position: chr2:40488927-40488799 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 113-195
Cow position: chr2:7524013-7524095 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 74
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 113-239
Cow position: chr2:65932084-65931954 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 114-197
Cow position: chr2:5815901-5815984 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 75
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 114-213
Cow position: chr2:7478824-7478922 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 114-238
Cow position: chr2:46316988-46316862 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 114-241
Cow position: chr2:44222942-44222811 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 103, 0

Conread position: 115-205
Cow position: chr2:78379301-78379392 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 81
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 6, 0

Conread position: 115-222
Cow position: chr2:30954480-30954587 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 350-507
Cow position: chr2:45912721-45912562 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 129

Conread position: 62-236
Cow position: chr20:11359411-11359597 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 83-239
Cow position: chr20:13752417-13752254 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 87-187
Cow position: chr20:38061575-38061679 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 87-240
Cow position: chr20:12581758-12581924 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 143

Conread position: 88-206
Cow position: chr20:13617408-13617294 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 88-213
Cow position: chr20:33532487-33532364 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 88-227
Cow position: chr20:1824434-1824581 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 90-240
Cow position: chr20:15568765-15568919 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 125, 0

Conread position: 91-241
Cow position: chr20:20158317-20158165 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 118, 17

Conread position: 93-188
Cow position: chr20:13025427-13025524 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 93-213
Cow position: chr20:38934874-38934994 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 26

Conread position: 98-241
Cow position: chr20:32463346-32463491 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 121

Conread position: 102-206
Cow position: chr20:34097781-34097885 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 102-213
Cow position: chr20:6054337-6054448 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 102-222
Cow position: chr20:37358028-37357908 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 102-240
Cow position: chr20:20967493-20967351 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 121, 0

Conread position: 102-241
Cow position: chr20:15530032-15529890 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 115, 82

Conread position: 102-244
Cow position: chr20:6248429-6248575 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 104-213
Cow position: chr20:17251887-17251778 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 108-237
Cow position: chr20:34372538-34372669 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 109-206
Cow position: chr20:15515275-15515372 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 109-220
Cow position: chr20:2823035-2822924 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-240
Cow position: chr20:354736-354867 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 104, 108

Conread position: 109-240
Cow position: chr20:5365091-5364960 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 104, 108

Conread position: 109-240
Cow position: chr20:11008335-11008200 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 109-240
Cow position: chr20:16941123-16941257 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 109-240
Cow position: chr20:19751472-19751337 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 109-240
Cow position: chr20:40158065-40157930 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 109-241
Cow position: chr20:3148849-3148713 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 109-241
Cow position: chr20:21815726-21815590 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 109-244
Cow position: chr20:5814731-5814593 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 108, 90

Conread position: 109-244
Cow position: chr20:39417738-39417873 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 110-222
Cow position: chr20:2316261-2316373 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 110-222
Cow position: chr20:5703636-5703523 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 114-222
Cow position: chr20:22959188-22959295 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 114-242
Cow position: chr20:9412648-9412516 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 115-240
Cow position: chr20:14283079-14282950 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 115-244
Cow position: chr20:30744562-30744695 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 66-244
Cow position: chr21:5427170-5426987 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 7

Conread position: 68-237
Cow position: chr21:15012674-15012493 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 85-238
Cow position: chr21:33931-33772 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 87-187
Cow position: chr21:30658080-30657978 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 87-240
Cow position: chr21:6735974-6736138 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 87-241
Cow position: chr21:802105-802267 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 87-241
Cow position: chr21:31691692-31691535 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 88-195
Cow position: chr21:30205166-30205273 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 88-197
Cow position: chr21:32536609-32536494 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 88-206
Cow position: chr21:33413881-33413999 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 88-212
Cow position: chr21:49353842-49353719 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 88-217
Cow position: chr21:23568443-23568308 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 124

Conread position: 89-195
Cow position: chr21:42562836-42562727 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 89-243
Cow position: chr21:44214328-44214175 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 128, 29

Conread position: 90-196
Cow position: chr21:1059281-1059174 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 90-206
Cow position: chr21:23587088-23586971 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 20, 55

Conread position: 90-206
Cow position: chr21:37837862-37837977 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 90-240
Cow position: chr21:19868746-19868904 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 90-240
Cow position: chr21:38900979-38900825 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 81

Conread position: 93-240
Cow position: chr21:32559159-32559314 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 97-202
Cow position: chr21:16498716-16498608 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 98-240
Cow position: chr21:28244667-28244522 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 108, 0

Conread position: 99-212
Cow position: chr21:46451760-46451871 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 102-195
Cow position: chr21:45537378-45537284 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 102-197
Cow position: chr21:42905205-42905300 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 102-213
Cow position: chr21:42017410-42017521 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 102-222
Cow position: chr21:745366-745248 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 102-239
Cow position: chr21:8545830-8545966 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 102-240
Cow position: chr21:10264225-10264084 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 109, 41

Conread position: 102-240
Cow position: chr21:31159590-31159453 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 114, 82

Conread position: 102-241
Cow position: chr21:641780-641637 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 102-241
Cow position: chr21:38121295-38121151 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 108-222
Cow position: chr21:32339553-32339667 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 109-196
Cow position: chr21:6291932-6291845 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-196
Cow position: chr21:29418754-29418667 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 78
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 109-213
Cow position: chr21:27521154-27521257 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 109-220
Cow position: chr21:28617974-28617863 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 109-222
Cow position: chr21:23321892-23322005 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-240
Cow position: chr21:643510-643375 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 109-240
Cow position: chr21:9990696-9990561 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 109-240
Cow position: chr21:28237522-28237655 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 105, 75

Conread position: 109-240
Cow position: chr21:36910117-36909982 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 109-241
Cow position: chr21:868739-868874 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 95, 9

Conread position: 109-241
Cow position: chr21:19359990-19360126 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 109-241
Cow position: chr21:30222531-30222395 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 109-241
Cow position: chr21:30980392-30980527 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 108, 78

Conread position: 109-241
Cow position: chr21:36682511-36682375 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 109-241
Cow position: chr21:39393935-39393798 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 109-243
Cow position: chr21:15976818-15976681 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 97, 56

Conread position: 110-213
Cow position: chr21:28924295-28924191 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 110-241
Cow position: chr21:41046991-41046857 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 113-240
Cow position: chr21:396049-395919 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 85, 106

Conread position: 113-240
Cow position: chr21:20160858-20160727 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 106, 0

Conread position: 114-240
Cow position: chr21:30835544-30835417 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 114-244
Cow position: chr21:40475679-40475547 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 92, 127

Conread position: 114-267
Cow position: chr21:13225896-13225740 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 103, 130

Conread position: 115-223
Cow position: chr21:10004706-10004813 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 350-507
Cow position: chr21:45262835-45262677 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 55, 23

Conread position: 52-206
Cow position: chr22:6326618-6326466 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 71-240
Cow position: chr22:30818379-30818197 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 16, 81

Conread position: 73-196
Cow position: chr22:40072135-40072009 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 83-196
Cow position: chr22:6360037-6360152 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 87-239
Cow position: chr22:10532645-10532485 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 87-240
Cow position: chr22:23675821-23675979 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 135

Conread position: 87-241
Cow position: chr22:10122520-10122362 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 128, 0

Conread position: 87-241
Cow position: chr22:17949826-17949989 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 87-241
Cow position: chr22:25742811-25742966 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 130, 23

Conread position: 88-188
Cow position: chr22:3945508-3945408 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 43

Conread position: 88-196
Cow position: chr22:644629-644736 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 94
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 29, 44

Conread position: 88-196
Cow position: chr22:15668332-15668444 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 88-206
Cow position: chr22:17897823-17897701 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 88-238
Cow position: chr22:14381799-14381645 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 118, 0

Conread position: 90-196
Cow position: chr22:38939803-38939908 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 90-205
Cow position: chr22:2201884-2201763 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 90-206
Cow position: chr22:1830192-1830070 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 90-213
Cow position: chr22:12777235-12777362 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 90-213
Cow position: chr22:30687168-30687041 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 90-222
Cow position: chr22:12188344-12188475 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 99
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 90-238
Cow position: chr22:534638-534485 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 90-240
Cow position: chr22:2524099-2523946 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 95, 25

Conread position: 90-240
Cow position: chr22:8733197-8733354 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 90-240
Cow position: chr22:12749761-12749917 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 90-240
Cow position: chr22:28672284-28672129 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 90-241
Cow position: chr22:10295177-10295022 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 90

Conread position: 91-196
Cow position: chr22:35029407-35029301 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 81

Conread position: 93-206
Cow position: chr22:10763920-10763805 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 93-242
Cow position: chr22:4563502-4563344 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 98-240
Cow position: chr22:14372300-14372163 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 100-222
Cow position: chr22:23857176-23857052 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 100-238
Cow position: chr22:17652563-17652421 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 102-213
Cow position: chr22:31309010-31308899 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 102-222
Cow position: chr22:8331124-8331004 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 92
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 102-231
Cow position: chr22:27275588-27275459 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 102-240
Cow position: chr22:12389225-12389083 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 102-240
Cow position: chr22:12678296-12678438 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 102-241
Cow position: chr22:18926482-18926339 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 102-241
Cow position: chr22:26267973-26267833 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 122, 115

Conread position: 108-240
Cow position: chr22:24134206-24134339 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 109-190
Cow position: chr22:1106186-1106105 (view UCSC Genome Browser custom track)
Alignm length: 82
Alignm identity: 73
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-195
Cow position: chr22:530459-530545 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-197
Cow position: chr22:13719913-13720001 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 76
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-206
Cow position: chr22:15024991-15025088 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-213
Cow position: chr22:2704417-2704313 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 109-213
Cow position: chr22:7518674-7518570 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-213
Cow position: chr22:23398285-23398389 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 109-238
Cow position: chr22:41854026-41853891 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 109-240
Cow position: chr22:4075765-4075903 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 109-240
Cow position: chr22:10553566-10553701 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 110, 0

Conread position: 109-240
Cow position: chr22:16044297-16044432 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 109-241
Cow position: chr22:4017592-4017460 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 90, 83

Conread position: 109-241
Cow position: chr22:12902736-12902864 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 109-241
Cow position: chr22:13957525-13957661 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 109-241
Cow position: chr22:36432854-36432987 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 90, 109

Conread position: 109-243
Cow position: chr22:4164097-4163960 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 110-244
Cow position: chr22:8883129-8882996 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 128, 0

Conread position: 112-213
Cow position: chr22:28665399-28665298 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 112-214
Cow position: chr22:8287299-8287199 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 112-240
Cow position: chr22:9372637-9372505 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 107, 0

Conread position: 113-196
Cow position: chr22:1074379-1074296 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 76
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 113-240
Cow position: chr22:10752426-10752558 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 113-243
Cow position: chr22:3301224-3301358 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 114-206
Cow position: chr22:2627694-2627602 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 114-240
Cow position: chr22:2644042-2643914 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 114-240
Cow position: chr22:5595697-5595825 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 100, 76

Conread position: 114-240
Cow position: chr22:34712839-34712710 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 31

Conread position: 115-222
Cow position: chr22:12195455-12195562 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 115-240
Cow position: chr22:16724574-16724703 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 115-240
Cow position: chr22:47555961-47555835 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 116-240
Cow position: chr22:44180705-44180577 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 51-194
Cow position: chr23:32546090-32546230 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 54-241
Cow position: chr23:5732732-5732540 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 33, 17

Conread position: 73-212
Cow position: chr23:22668338-22668483 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 76-241
Cow position: chr23:13202200-13202369 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 83

Conread position: 82-206
Cow position: chr23:5386940-5387063 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 8

Conread position: 84-240
Cow position: chr23:23197494-23197336 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 85-235
Cow position: chr23:6244442-6244601 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 34, 125

Conread position: 85-241
Cow position: chr23:21452573-21452741 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 87-240
Cow position: chr23:18286341-18286182 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 87-244
Cow position: chr23:1194337-1194506 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 27, 142

Conread position: 88-195
Cow position: chr23:14895531-14895635 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 88-240
Cow position: chr23:23409879-23409723 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 29, 100

Conread position: 88-243
Cow position: chr23:18901909-18902065 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 111, 0

Conread position: 90-195
Cow position: chr23:25933303-25933196 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 90-196
Cow position: chr23:40328990-40329098 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 90-206
Cow position: chr23:22674279-22674394 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 90-212
Cow position: chr23:26698327-26698450 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 90-213
Cow position: chr23:18417240-18417113 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 90-222
Cow position: chr23:5514667-5514536 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 99
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 90-240
Cow position: chr23:39753257-39753106 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 135, 45

Conread position: 90-241
Cow position: chr23:16961441-16961286 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 124, 0

Conread position: 98-241
Cow position: chr23:5881382-5881529 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 119, 0

Conread position: 98-265
Cow position: chr23:17597562-17597389 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 102-213
Cow position: chr23:38159-38048 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 102-222
Cow position: chr23:306654-306534 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 102-222
Cow position: chr23:307587-307467 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 102-222
Cow position: chr23:38118089-38117968 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 107, 0

Conread position: 102-240
Cow position: chr23:5686490-5686632 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 102-240
Cow position: chr23:18739332-18739475 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 102-240
Cow position: chr23:36200534-36200400 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 102-241
Cow position: chr23:187310-187167 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 116, 0

Conread position: 102-241
Cow position: chr23:26986140-26986282 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 113, 77

Conread position: 107-240
Cow position: chr23:21336358-21336494 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 116, 16

Conread position: 109-196
Cow position: chr23:13673907-13673994 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-196
Cow position: chr23:35930076-35929988 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 77
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 109-206
Cow position: chr23:38845725-38845627 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 109-213
Cow position: chr23:1480764-1480660 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-222
Cow position: chr23:1798235-1798122 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-222
Cow position: chr23:26283847-26283736 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 109-223
Cow position: chr23:3244344-3244458 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 109-223
Cow position: chr23:22238697-22238811 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 89
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-239
Cow position: chr23:8698545-8698411 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 109-239
Cow position: chr23:32621410-32621274 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 109-240
Cow position: chr23:4104520-4104388 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 116, 90

Conread position: 109-240
Cow position: chr23:7574500-7574631 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 95, 102

Conread position: 109-240
Cow position: chr23:41348500-41348634 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 105, 9

Conread position: 109-242
Cow position: chr23:13511850-13511710 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 109-249
Cow position: chr23:24779418-24779562 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 110-196
Cow position: chr23:35718434-35718349 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 110-238
Cow position: chr23:1397915-1398047 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 110-241
Cow position: chr23:348824-348959 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 111-223
Cow position: chr23:16699919-16700031 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 111-240
Cow position: chr23:14569378-14569511 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 114-239
Cow position: chr23:1701291-1701162 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 114-240
Cow position: chr23:4972885-4972756 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 92, 73

Conread position: 114-241
Cow position: chr23:29458979-29459110 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 103, 0

Conread position: 115-216
Cow position: chr23:35254047-35254148 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 356-507
Cow position: chr23:24966546-24966391 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 368-507
Cow position: chr23:12363686-12363546 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 33-244
Cow position: chr24:30313840-30314066 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 49, 134

Conread position: 52-223
Cow position: chr24:22235617-22235451 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 87-241
Cow position: chr24:15246521-15246681 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 87-241
Cow position: chr24:24490894-24491055 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 78

Conread position: 88-196
Cow position: chr24:16510102-16509988 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 88-196
Cow position: chr24:38841303-38841411 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 88-240
Cow position: chr24:19187062-19186905 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 134

Conread position: 90-195
Cow position: chr24:23000131-23000025 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 90-212
Cow position: chr24:6677763-6677641 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 25

Conread position: 90-240
Cow position: chr24:28722005-28721852 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 75

Conread position: 98-241
Cow position: chr24:37974872-37975019 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 117, 0

Conread position: 102-196
Cow position: chr24:21623327-21623233 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 102-213
Cow position: chr24:34008468-34008579 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 102-243
Cow position: chr24:41412192-41412334 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 115, 0

Conread position: 109-195
Cow position: chr24:32818206-32818291 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 109-196
Cow position: chr24:10840822-10840909 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-213
Cow position: chr24:7113320-7113216 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 109-213
Cow position: chr24:32890946-32891050 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 109-215
Cow position: chr24:34742851-34742745 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-220
Cow position: chr24:256124-256013 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-234
Cow position: chr24:27719429-27719549 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 109-240
Cow position: chr24:28470582-28470717 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 109-240
Cow position: chr24:44987277-44987412 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 102, 0

Conread position: 109-241
Cow position: chr24:2992784-2992917 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 106, 33

Conread position: 109-241
Cow position: chr24:30235967-30235835 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 90, 14

Conread position: 109-244
Cow position: chr24:17294100-17294231 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 110-241
Cow position: chr24:22133268-22133133 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 111-239
Cow position: chr24:20969569-20969698 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 105, 12

Conread position: 112-240
Cow position: chr24:27824557-27824425 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 84, 109

Conread position: 114-196
Cow position: chr24:10300169-10300087 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 73
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 114-241
Cow position: chr24:7390244-7390371 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 99, 103

Conread position: 115-213
Cow position: chr24:39218460-39218558 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 115-241
Cow position: chr24:27284908-27284783 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 98

Conread position: 116-220
Cow position: chr24:162094-161990 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 350-507
Cow position: chr24:33222054-33221895 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 68-241
Cow position: chr25:9107356-9107540 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 82-241
Cow position: chr25:12509863-12510027 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 84-222
Cow position: chr25:23016164-23016027 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 85-241
Cow position: chr25:17190599-17190759 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 30, 136

Conread position: 85-241
Cow position: chr25:22179065-22178901 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 20, 109

Conread position: 87-195
Cow position: chr25:14210129-14210017 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 87-213
Cow position: chr25:23998786-23998908 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 87-223
Cow position: chr25:11661674-11661812 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 87-240
Cow position: chr25:33457882-33457717 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 87-241
Cow position: chr25:14720885-14720728 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 130, 37

Conread position: 88-196
Cow position: chr25:10817278-10817389 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 88-206
Cow position: chr25:35109126-35109246 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 88-223
Cow position: chr25:17704891-17704750 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 89-213
Cow position: chr25:14513257-14513131 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 90-205
Cow position: chr25:26224886-26225005 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 90-222
Cow position: chr25:12840580-12840711 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 9

Conread position: 90-237
Cow position: chr25:2361975-2361825 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 27, 117

Conread position: 90-240
Cow position: chr25:36840536-36840381 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 27, 84

Conread position: 90-244
Cow position: chr25:13325719-13325561 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 139, 0

Conread position: 91-241
Cow position: chr25:1840462-1840308 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 93-205
Cow position: chr25:32277467-32277583 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 98-196
Cow position: chr25:33100706-33100608 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 98-239
Cow position: chr25:24669318-24669452 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 98-241
Cow position: chr25:23244870-23245018 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 98-241
Cow position: chr25:38958086-38957946 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 102-196
Cow position: chr25:14164322-14164228 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 79
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 102-206
Cow position: chr25:1838367-1838264 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 102-240
Cow position: chr25:13272697-13272554 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 109-189
Cow position: chr25:23769767-23769847 (view UCSC Genome Browser custom track)
Alignm length: 81
Alignm identity: 72
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-196
Cow position: chr25:6781982-6781895 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-202
Cow position: chr25:11855430-11855522 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 109-202
Cow position: chr25:27520638-27520731 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-205
Cow position: chr25:7673421-7673325 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-206
Cow position: chr25:7311276-7311373 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-214
Cow position: chr25:36136019-36136125 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 109-240
Cow position: chr25:432928-433063 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 109-240
Cow position: chr25:6473967-6474102 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 106, 0

Conread position: 109-240
Cow position: chr25:15218252-15218121 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-241
Cow position: chr25:15463707-15463571 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 27

Conread position: 109-241
Cow position: chr25:22531401-22531267 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 106, 0

Conread position: 109-241
Cow position: chr25:26306084-26306220 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 109-241
Cow position: chr25:28597490-28597628 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 109-241
Cow position: chr25:40931393-40931261 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 98, 108

Conread position: 109-244
Cow position: chr25:17119862-17119725 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 116, 129

Conread position: 109-264
Cow position: chr25:36872936-36873093 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 146

Conread position: 112-213
Cow position: chr25:11956922-11956820 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 114-196
Cow position: chr25:8410919-8411001 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 74
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 66-223
Cow position: chr26:8341679-8341521 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 51, 99

Conread position: 74-238
Cow position: chr26:35704560-35704394 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 13, 73

Conread position: 87-236
Cow position: chr26:32517296-32517448 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 124, 0

Conread position: 88-196
Cow position: chr26:14905646-14905756 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 88-206
Cow position: chr26:9104124-9104239 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 88-213
Cow position: chr26:1325917-1325792 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 90-240
Cow position: chr26:7224185-7224338 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 94, 28

Conread position: 92-205
Cow position: chr26:25407548-25407437 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 33, 73

Conread position: 98-197
Cow position: chr26:8478722-8478821 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 98-241
Cow position: chr26:9535666-9535521 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 111, 68

Conread position: 98-241
Cow position: chr26:22892295-22892442 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 102-205
Cow position: chr26:27482420-27482523 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 102-240
Cow position: chr26:33253170-33253312 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 88

Conread position: 102-241
Cow position: chr26:34026891-34027032 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 122, 0

Conread position: 107-240
Cow position: chr26:12893287-12893423 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 112, 44

Conread position: 108-238
Cow position: chr26:32836378-32836245 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 106, 9

Conread position: 108-241
Cow position: chr26:31605546-31605409 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 109-222
Cow position: chr26:16435517-16435630 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 109-223
Cow position: chr26:15599388-15599501 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 109-240
Cow position: chr26:9501847-9501713 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 109-241
Cow position: chr26:12144979-12145115 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 109-241
Cow position: chr26:20291553-20291689 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 105, 0

Conread position: 109-241
Cow position: chr26:20769990-20769854 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 109-241
Cow position: chr26:33242028-33241892 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 109-244
Cow position: chr26:19774161-19774299 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 93, 14

Conread position: 110-206
Cow position: chr26:26245033-26245128 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 110-213
Cow position: chr26:24240817-24240715 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 110-222
Cow position: chr26:829943-829831 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 114-240
Cow position: chr26:24453776-24453903 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 102, 87

Conread position: 350-507
Cow position: chr26:26888204-26888047 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 91, 68

Conread position: 47-240
Cow position: chr27:21393735-21393538 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 36, 6

Conread position: 65-239
Cow position: chr27:6319700-6319887 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 85-241
Cow position: chr27:27055095-27055256 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 87-205
Cow position: chr27:31031265-31031385 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 87-241
Cow position: chr27:17397650-17397484 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 88-213
Cow position: chr27:26909786-26909653 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 88-236
Cow position: chr27:13251826-13251977 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 132

Conread position: 88-241
Cow position: chr27:15332486-15332325 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 89-222
Cow position: chr27:17918499-17918366 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 89-222
Cow position: chr27:17918903-17918770 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 90-197
Cow position: chr27:20749198-20749088 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 90-202
Cow position: chr27:1637122-1637008 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 90-223
Cow position: chr27:22792643-22792780 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 90-241
Cow position: chr27:15409221-15409066 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 96-241
Cow position: chr27:20812726-20812875 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 97-241
Cow position: chr27:15454031-15454178 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 98-238
Cow position: chr27:15315342-15315484 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 109, 122

Conread position: 99-241
Cow position: chr27:15865431-15865577 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 102-206
Cow position: chr27:26400894-26400790 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 102-239
Cow position: chr27:16965404-16965540 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 76, 115

Conread position: 102-241
Cow position: chr27:23452289-23452431 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 105-240
Cow position: chr27:29693308-29693447 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 104, 0

Conread position: 106-202
Cow position: chr27:21951146-21951051 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 108-238
Cow position: chr27:19452836-19452969 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 111, 15

Conread position: 109-206
Cow position: chr27:24303781-24303878 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 109-213
Cow position: chr27:27673181-27673078 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 109-236
Cow position: chr27:26118334-26118463 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 109-240
Cow position: chr27:1789304-1789170 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 109-240
Cow position: chr27:2592376-2592512 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 109-240
Cow position: chr27:27641176-27641043 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 97, 29

Conread position: 109-241
Cow position: chr27:30489576-30489440 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 111-240
Cow position: chr27:16705087-16705220 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 112-222
Cow position: chr27:27255825-27255935 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 113-213
Cow position: chr27:26413416-26413316 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 113-240
Cow position: chr27:6550302-6550428 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 114-206
Cow position: chr27:20336941-20337033 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 78
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 114-240
Cow position: chr27:24709396-24709522 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 121-238
Cow position: chr27:19660778-19660899 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 350-507
Cow position: chr27:19685667-19685826 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 76-241
Cow position: chr28:2131764-2131933 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 27

Conread position: 85-239
Cow position: chr28:10588871-10589028 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 125, 57

Conread position: 87-207
Cow position: chr28:3914865-3914746 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 87-213
Cow position: chr28:3678519-3678385 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 87-213
Cow position: chr28:4071121-4070992 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 27, 80

Conread position: 87-213
Cow position: chr28:12991295-12991165 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 87-240
Cow position: chr28:1099517-1099668 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 87-241
Cow position: chr28:4013243-4013075 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 87-241
Cow position: chr28:6975394-6975232 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 87-241
Cow position: chr28:7131931-7132096 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 141

Conread position: 87-241
Cow position: chr28:11585049-11585211 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 87-241
Cow position: chr28:22813408-22813253 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 30, 130

Conread position: 88-195
Cow position: chr28:2279443-2279555 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 88-195
Cow position: chr28:24726281-24726396 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 88-196
Cow position: chr28:10053170-10053285 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 88-213
Cow position: chr28:3746356-3746225 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 88-213
Cow position: chr28:5674031-5673898 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 88-240
Cow position: chr28:11866509-11866673 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 90-213
Cow position: chr28:20046699-20046576 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 93

Conread position: 93-241
Cow position: chr28:8396484-8396326 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 95-240
Cow position: chr28:3143733-3143883 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 110

Conread position: 97-194
Cow position: chr28:2819914-2819817 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 97-239
Cow position: chr28:7267807-7267950 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 119, 104

Conread position: 98-183
Cow position: chr28:21263295-21263210 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 75
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 98-196
Cow position: chr28:23047756-23047658 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 98-216
Cow position: chr28:12933592-12933710 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 98-242
Cow position: chr28:5188289-5188439 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 98-244
Cow position: chr28:13090388-13090537 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 102-196
Cow position: chr28:16200609-16200703 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 102-213
Cow position: chr28:11559498-11559609 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 102-239
Cow position: chr28:3011136-3011276 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 86

Conread position: 102-241
Cow position: chr28:26982604-26982747 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 103-206
Cow position: chr28:117629-117733 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 103-206
Cow position: chr28:118743-118639 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 105-196
Cow position: chr28:3726079-3726169 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 105-206
Cow position: chr28:26269517-26269416 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-206
Cow position: chr28:2743209-2743111 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 109-213
Cow position: chr28:29434301-29434405 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-223
Cow position: chr28:21355358-21355244 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-236
Cow position: chr28:30902253-30902122 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 109-238
Cow position: chr28:26826346-26826217 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 109-239
Cow position: chr28:32179820-32179690 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 116, 94

Conread position: 109-240
Cow position: chr28:20397244-20397378 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 9

Conread position: 109-241
Cow position: chr28:5204322-5204186 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 109-241
Cow position: chr28:13048157-13048292 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 109-241
Cow position: chr28:17739949-17739816 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 89, 105

Conread position: 109-245
Cow position: chr28:4307769-4307910 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 110-240
Cow position: chr28:10615820-10615954 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 109, 0

Conread position: 110-240
Cow position: chr28:27161201-27161334 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 94, 60

Conread position: 110-241
Cow position: chr28:2772836-2772704 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 96, 47

Conread position: 111-222
Cow position: chr28:9418841-9418952 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 112-244
Cow position: chr28:7498023-7498158 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 105, 131

Conread position: 113-240
Cow position: chr28:4881117-4881248 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 118-235
Cow position: chr28:5817960-5817843 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 83-239
Cow position: chr29:13028583-13028430 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 119, 23

Conread position: 83-239
Cow position: chr29:40117723-40117558 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 31, 93

Conread position: 85-218
Cow position: chr29:33393821-33393689 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 85-240
Cow position: chr29:8686465-8686315 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 121, 33

Conread position: 87-239
Cow position: chr29:29308428-29308586 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 88-186
Cow position: chr29:32963681-32963580 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 88-196
Cow position: chr29:28979360-28979469 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 88-201
Cow position: chr29:415157-415043 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 106, 0

Conread position: 88-216
Cow position: chr29:29940784-29940653 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 88-243
Cow position: chr29:39111171-39111329 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 25, 52

Conread position: 90-195
Cow position: chr29:37293178-37293070 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 90-196
Cow position: chr29:23678852-23678742 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 90-222
Cow position: chr29:4423299-4423432 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 90-223
Cow position: chr29:31981973-31981837 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 90-240
Cow position: chr29:3685370-3685534 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 22, 93

Conread position: 90-241
Cow position: chr29:22162110-22162265 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 124, 0

Conread position: 90-241
Cow position: chr29:41112738-41112895 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 92-196
Cow position: chr29:23825811-23825705 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 93-240
Cow position: chr29:28195385-28195530 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 98-206
Cow position: chr29:34359691-34359798 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 99-195
Cow position: chr29:34517360-34517457 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 99-240
Cow position: chr29:11053730-11053874 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 26, 16

Conread position: 102-222
Cow position: chr29:18878354-18878474 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 102-240
Cow position: chr29:23874587-23874445 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 123, 0

Conread position: 102-244
Cow position: chr29:17297263-17297117 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 108-241
Cow position: chr29:34358857-34358994 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 109-213
Cow position: chr29:24051262-24051365 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 109-216
Cow position: chr29:16365765-16365872 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 109-219
Cow position: chr29:19061655-19061764 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 109-240
Cow position: chr29:34687955-34687820 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 89, 112

Conread position: 109-240
Cow position: chr29:44684219-44684088 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 15, 74

Conread position: 109-241
Cow position: chr29:8926341-8926477 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 105, 0

Conread position: 109-241
Cow position: chr29:15947287-15947151 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 109-241
Cow position: chr29:22723721-22723585 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 109-241
Cow position: chr29:23825090-23825226 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 111-238
Cow position: chr29:40994773-40994903 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 108, 79

Conread position: 112-213
Cow position: chr29:25333344-25333443 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 112-222
Cow position: chr29:40298903-40299013 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 87
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 113-213
Cow position: chr29:19059967-19060066 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 114-222
Cow position: chr29:13867095-13867203 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 114-240
Cow position: chr29:5520370-5520500 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 23-213
Cow position: chr3:4050385-4050187 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 96

Conread position: 67-239
Cow position: chr3:55984240-55984063 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 20, 115

Conread position: 85-241
Cow position: chr3:68707889-68708046 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 133

Conread position: 87-213
Cow position: chr3:76922543-76922669 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 87-216
Cow position: chr3:9641686-9641558 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 98, 39

Conread position: 87-240
Cow position: chr3:84250418-84250579 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 87-241
Cow position: chr3:22232536-22232688 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 124, 14

Conread position: 87-241
Cow position: chr3:59604973-59604808 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 141

Conread position: 87-241
Cow position: chr3:68616204-68616361 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 116

Conread position: 88-183
Cow position: chr3:43527664-43527760 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 88-205
Cow position: chr3:30180213-30180088 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 88-206
Cow position: chr3:11716111-11715998 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 88-213
Cow position: chr3:61133756-61133632 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 88-220
Cow position: chr3:70402768-70402631 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 29, 93

Conread position: 88-240
Cow position: chr3:15153818-15153654 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 89-205
Cow position: chr3:72549-72431 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 89-209
Cow position: chr3:5365794-5365675 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 90-188
Cow position: chr3:16107244-16107348 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 90-193
Cow position: chr3:20802512-20802617 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 90-197
Cow position: chr3:59000635-59000746 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 99

Conread position: 90-201
Cow position: chr3:31804642-31804754 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 54

Conread position: 90-213
Cow position: chr3:19793028-19792899 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 19, 78

Conread position: 90-213
Cow position: chr3:22092262-22092143 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 58, 16

Conread position: 90-215
Cow position: chr3:54557794-54557666 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 90-238
Cow position: chr3:56948965-56949123 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 90-240
Cow position: chr3:3985444-3985290 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 127

Conread position: 90-240
Cow position: chr3:20841752-20841910 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 90-240
Cow position: chr3:51233976-51234131 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 90-240
Cow position: chr3:71423438-71423588 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 139, 113

Conread position: 90-241
Cow position: chr3:82173943-82174097 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 125, 44

Conread position: 90-243
Cow position: chr3:7566293-7566457 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 92-241
Cow position: chr3:20677723-20677877 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 130

Conread position: 93-209
Cow position: chr3:18687026-18686904 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 93-213
Cow position: chr3:55712556-55712434 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 93-240
Cow position: chr3:15228708-15228860 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 93-240
Cow position: chr3:55177626-55177783 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 94-241
Cow position: chr3:55271934-55272083 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 115, 8

Conread position: 98-223
Cow position: chr3:75050509-75050633 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 98-241
Cow position: chr3:41652484-41652338 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 117, 20

Conread position: 98-241
Cow position: chr3:44960896-44961042 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 119, 130

Conread position: 98-241
Cow position: chr3:68004592-68004740 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 99-222
Cow position: chr3:76056177-76056300 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 102-213
Cow position: chr3:17058441-17058552 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 102-220
Cow position: chr3:83199615-83199498 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 102-222
Cow position: chr3:45314449-45314329 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 102-239
Cow position: chr3:75238562-75238421 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 102, 0

Conread position: 102-240
Cow position: chr3:12711810-12711952 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 115, 0

Conread position: 102-241
Cow position: chr3:16752154-16752296 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 113, 87

Conread position: 102-241
Cow position: chr3:66900628-66900771 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 104-240
Cow position: chr3:82366231-82366092 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 58, 101

Conread position: 104-241
Cow position: chr3:49650492-49650350 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 107-196
Cow position: chr3:29234581-29234670 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 77
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-206
Cow position: chr3:11640831-11640734 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-239
Cow position: chr3:48900235-48900368 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 109-240
Cow position: chr3:15443631-15443765 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 105, 0

Conread position: 109-240
Cow position: chr3:45211399-45211264 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 109-240
Cow position: chr3:54100628-54100763 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 109-240
Cow position: chr3:67959824-67959953 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 104, 17

Conread position: 109-241
Cow position: chr3:22165318-22165453 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 109-241
Cow position: chr3:23408260-23408394 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 110

Conread position: 109-241
Cow position: chr3:59621550-59621686 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 109-247
Cow position: chr3:84137717-84137859 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 110-213
Cow position: chr3:62186248-62186145 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 110-239
Cow position: chr3:76267878-76268011 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 110-240
Cow position: chr3:17934840-17934975 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 110-240
Cow position: chr3:57760595-57760461 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 110-240
Cow position: chr3:74134801-74134667 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 110-241
Cow position: chr3:3738578-3738445 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 75, 105

Conread position: 112-207
Cow position: chr3:45308002-45307907 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 113-216
Cow position: chr3:53150425-53150322 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 114-213
Cow position: chr3:47199034-47199133 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 114-223
Cow position: chr3:53270923-53270814 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 115-240
Cow position: chr3:27976432-27976561 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 116-240
Cow position: chr3:71497047-71497175 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 121-240
Cow position: chr3:34669647-34669764 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 363-507
Cow position: chr3:56059709-56059856 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 363-508
Cow position: chr3:19626608-19626460 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 56

Conread position: 57-241
Cow position: chr4:21506785-21506977 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 25, 75

Conread position: 76-241
Cow position: chr4:53208443-53208272 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 82-213
Cow position: chr4:33360245-33360115 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 83-243
Cow position: chr4:34509983-34509817 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 84-241
Cow position: chr4:68889421-68889582 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 133, 0

Conread position: 85-214
Cow position: chr4:23808089-23807957 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 11

Conread position: 87-195
Cow position: chr4:54938029-54937925 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 87-201
Cow position: chr4:27657119-27656996 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 87-241
Cow position: chr4:20327575-20327730 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 98, 31

Conread position: 87-241
Cow position: chr4:36744716-36744559 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 133

Conread position: 87-241
Cow position: chr4:48409138-48409289 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 128, 29

Conread position: 87-243
Cow position: chr4:34983356-34983519 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 88-190
Cow position: chr4:45626486-45626593 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 72

Conread position: 88-197
Cow position: chr4:22482465-22482352 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 88-202
Cow position: chr4:30769178-30769057 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 90

Conread position: 88-205
Cow position: chr4:17790148-17790273 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 105
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 88-209
Cow position: chr4:19200256-19200127 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 88-213
Cow position: chr4:8083662-8083787 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 109
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 88-213
Cow position: chr4:61391088-61391216 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 88-223
Cow position: chr4:11366471-11366340 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 88-238
Cow position: chr4:10732366-10732205 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 89-240
Cow position: chr4:65649998-65650150 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 90-196
Cow position: chr4:22849358-22849463 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 95, 0

Conread position: 90-196
Cow position: chr4:45840536-45840426 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 90-196
Cow position: chr4:56805316-56805204 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 90-240
Cow position: chr4:15236768-15236616 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 116

Conread position: 90-240
Cow position: chr4:27699165-27699012 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 129, 0

Conread position: 90-240
Cow position: chr4:49794794-49794646 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 27, 114

Conread position: 91-238
Cow position: chr4:29384098-29384250 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 114

Conread position: 93-241
Cow position: chr4:19597191-19597345 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 96-207
Cow position: chr4:17774222-17774333 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 97-197
Cow position: chr4:28781521-28781621 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 98-201
Cow position: chr4:46597494-46597391 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 98-213
Cow position: chr4:61608839-61608954 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 98-223
Cow position: chr4:348299-348424 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 99-238
Cow position: chr4:1495284-1495420 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 102-196
Cow position: chr4:38946337-38946243 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 102-197
Cow position: chr4:23271404-23271309 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 85
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 102-213
Cow position: chr4:44772921-44773032 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 102-240
Cow position: chr4:34383220-34383361 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 97, 88

Conread position: 102-241
Cow position: chr4:47038889-47038746 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 108-240
Cow position: chr4:46455953-46456085 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 117, 95

Conread position: 109-205
Cow position: chr4:19098587-19098491 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 109-217
Cow position: chr4:25802805-25802697 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-222
Cow position: chr4:59378024-59377911 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-225
Cow position: chr4:51708180-51708064 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-238
Cow position: chr4:46591781-46591649 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 97, 14

Conread position: 109-239
Cow position: chr4:12591099-12591233 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 109-240
Cow position: chr4:38944143-38944276 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 105, 0

Conread position: 109-240
Cow position: chr4:44782489-44782355 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 109-240
Cow position: chr4:45706157-45706023 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 98

Conread position: 109-240
Cow position: chr4:51920659-51920524 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 110, 0

Conread position: 109-240
Cow position: chr4:65175030-65175165 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 109-241
Cow position: chr4:386281-386413 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 90, 33

Conread position: 109-241
Cow position: chr4:19578502-19578369 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 69, 107

Conread position: 109-243
Cow position: chr4:1986-1848 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 110-206
Cow position: chr4:32693902-32693806 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 110-213
Cow position: chr4:53819572-53819675 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 111-244
Cow position: chr4:59002027-59002162 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 78, 109

Conread position: 113-222
Cow position: chr4:19561899-19561790 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 114-206
Cow position: chr4:54937191-54937099 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 82
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 114-239
Cow position: chr4:67393201-67393072 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 109
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 95, 0

Conread position: 115-240
Cow position: chr4:13919086-13918961 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 344-507
Cow position: chr4:48409372-48409207 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 106

Conread position: 350-507
Cow position: chr4:38935261-38935421 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 41-195
Cow position: chr5:36823103-36822945 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 32

Conread position: 57-241
Cow position: chr5:69731704-69731518 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 144

Conread position: 80-205
Cow position: chr5:4336467-4336344 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 83-241
Cow position: chr5:28302565-28302733 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 83-241
Cow position: chr5:30276872-30276702 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 83-241
Cow position: chr5:40109670-40109505 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 105

Conread position: 84-195
Cow position: chr5:8136648-8136533 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 7, 12

Conread position: 84-240
Cow position: chr5:54086711-54086554 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 10

Conread position: 85-246
Cow position: chr5:75228029-75228192 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 129, 22

Conread position: 87-195
Cow position: chr5:15471103-15470991 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 87-239
Cow position: chr5:15364052-15363896 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 130, 0

Conread position: 88-190
Cow position: chr5:65050038-65050144 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 88-195
Cow position: chr5:12478792-12478896 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 88-197
Cow position: chr5:41981534-41981428 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 88-222
Cow position: chr5:16668874-16668732 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 88-240
Cow position: chr5:35969700-35969546 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 116, 14

Conread position: 88-240
Cow position: chr5:55795789-55795954 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 89-241
Cow position: chr5:56524342-56524186 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 122, 0

Conread position: 90-213
Cow position: chr5:69427282-69427409 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 90-240
Cow position: chr5:3772021-3771863 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 90-240
Cow position: chr5:54350192-54350348 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 90-241
Cow position: chr5:44446696-44446854 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 90-243
Cow position: chr5:17105024-17104863 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 21, 131

Conread position: 93-222
Cow position: chr5:30562104-30561967 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 93-223
Cow position: chr5:51125842-51125975 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 95-195
Cow position: chr5:42753070-42752967 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 98-193
Cow position: chr5:25597992-25597896 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 98-202
Cow position: chr5:4280607-4280503 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 98-215
Cow position: chr5:18289281-18289166 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 98-240
Cow position: chr5:5016584-5016442 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 115, 119

Conread position: 100-240
Cow position: chr5:57230180-57230325 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 101-241
Cow position: chr5:35208417-35208276 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 106, 117

Conread position: 102-240
Cow position: chr5:30253896-30253754 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 108-196
Cow position: chr5:20882475-20882563 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 78
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-195
Cow position: chr5:63059209-63059123 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-196
Cow position: chr5:54311484-54311397 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-218
Cow position: chr5:60207855-60207747 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 109-235
Cow position: chr5:26476870-26476999 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 109-240
Cow position: chr5:2240843-2240976 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 109-240
Cow position: chr5:39937263-39937129 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 95, 0

Conread position: 109-240
Cow position: chr5:43992472-43992337 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 109-241
Cow position: chr5:17602057-17602188 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 109-241
Cow position: chr5:22795362-22795229 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 110

Conread position: 109-241
Cow position: chr5:45845540-45845679 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 44, 33

Conread position: 109-241
Cow position: chr5:59627248-59627112 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 110, 0

Conread position: 109-244
Cow position: chr5:12300059-12299920 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 19

Conread position: 110-202
Cow position: chr5:51053502-51053594 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 110-240
Cow position: chr5:458635-458502 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 107, 68

Conread position: 110-240
Cow position: chr5:45397716-45397586 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 89, 60

Conread position: 111-240
Cow position: chr5:37808517-37808650 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 114-206
Cow position: chr5:17644485-17644577 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 83
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 285-505
Cow position: chr5:21617327-21617551 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 45

Conread position: 293-507
Cow position: chr5:46509989-46509770 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 36

Conread position: 349-507
Cow position: chr5:56070793-56070954 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 130

Conread position: 52-240
Cow position: chr6:582056-582245 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 165, 24

Conread position: 83-206
Cow position: chr6:21590904-21590772 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 83-240
Cow position: chr6:53546228-53546062 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 87-187
Cow position: chr6:10613025-10612925 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 87-190
Cow position: chr6:41226649-41226752 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 87-241
Cow position: chr6:47575086-47574932 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 130, 21

Conread position: 87-242
Cow position: chr6:45690420-45690585 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 88-213
Cow position: chr6:8966282-8966155 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 88-222
Cow position: chr6:34195968-34196101 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 28

Conread position: 90-195
Cow position: chr6:30825584-30825693 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 90-196
Cow position: chr6:16352171-16352279 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 90-222
Cow position: chr6:60740202-60740063 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 90-223
Cow position: chr6:9008434-9008564 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 90-223
Cow position: chr6:55417341-55417480 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 90-240
Cow position: chr6:37395211-37395374 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 90-240
Cow position: chr6:38771463-38771312 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 128

Conread position: 90-243
Cow position: chr6:59603023-59603184 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 95-206
Cow position: chr6:15058552-15058441 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 98-202
Cow position: chr6:40032363-40032259 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 98-222
Cow position: chr6:13367458-13367334 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 98-241
Cow position: chr6:120418-120273 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 100-213
Cow position: chr6:10176131-10176244 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 102-195
Cow position: chr6:50882750-50882657 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 102-215
Cow position: chr6:44543981-44544093 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 102-222
Cow position: chr6:5095373-5095493 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 102-222
Cow position: chr6:22876762-22876882 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 102-241
Cow position: chr6:10105810-10105953 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 102-241
Cow position: chr6:31865261-31865124 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 105-219
Cow position: chr6:35984971-35985085 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 106-196
Cow position: chr6:67805850-67805940 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 78
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 108-212
Cow position: chr6:46282841-46282945 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-196
Cow position: chr6:29852904-29852991 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-196
Cow position: chr6:58076555-58076468 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-206
Cow position: chr6:18440316-18440413 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-240
Cow position: chr6:7801234-7801365 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 109
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 6, 108

Conread position: 109-240
Cow position: chr6:44194388-44194522 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 97, 40

Conread position: 109-240
Cow position: chr6:50771201-50771332 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 109-240
Cow position: chr6:56986489-56986621 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 107, 94

Conread position: 109-240
Cow position: chr6:69153571-69153440 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 109-241
Cow position: chr6:13565248-13565114 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 109-241
Cow position: chr6:15243417-15243281 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 109-241
Cow position: chr6:37149351-37149215 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 110, 0

Conread position: 110-194
Cow position: chr6:37603727-37603643 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 75
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 110-206
Cow position: chr6:35654389-35654485 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 110-220
Cow position: chr6:28900487-28900377 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 110-239
Cow position: chr6:60451587-60451455 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 112, 13

Conread position: 110-240
Cow position: chr6:38640394-38640260 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 110-240
Cow position: chr6:54867678-54867544 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 114-197
Cow position: chr6:64432095-64432012 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 76
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 114-213
Cow position: chr6:51530031-51530130 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 351-507
Cow position: chr6:47640482-47640323 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 68

Conread position: 29-218
Cow position: chr7:68774014-68773816 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 58, 46

Conread position: 57-213
Cow position: chr7:5201466-5201617 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 65-241
Cow position: chr7:53785768-53785952 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 68-241
Cow position: chr7:14174222-14174395 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 58

Conread position: 74-241
Cow position: chr7:40263460-40263625 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 46

Conread position: 82-239
Cow position: chr7:20176520-20176674 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 83-238
Cow position: chr7:30931782-30931942 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 16

Conread position: 87-187
Cow position: chr7:38357452-38357554 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 87-188
Cow position: chr7:60247839-60247738 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 87-217
Cow position: chr7:30277516-30277389 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 87-239
Cow position: chr7:22793532-22793374 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 87-241
Cow position: chr7:9449469-9449621 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 40, 125

Conread position: 87-241
Cow position: chr7:53382378-53382232 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 88-202
Cow position: chr7:14486260-14486146 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 29, 95

Conread position: 88-240
Cow position: chr7:4129591-4129751 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 89-195
Cow position: chr7:43055403-43055508 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 95
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 90-175
Cow position: chr7:34224330-34224243 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 78
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 90-194
Cow position: chr7:40110743-40110849 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 90-206
Cow position: chr7:34464548-34464425 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 90-213
Cow position: chr7:59076029-59075910 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 90-223
Cow position: chr7:24220854-24220718 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 90-239
Cow position: chr7:19466064-19466220 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 57

Conread position: 90-240
Cow position: chr7:36248286-36248131 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 133

Conread position: 93-196
Cow position: chr7:31049408-31049515 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 93
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 98-195
Cow position: chr7:11946058-11945961 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 98-196
Cow position: chr7:44942734-44942634 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 98-213
Cow position: chr7:11884105-11884221 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 98-239
Cow position: chr7:32946244-32946098 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 98-240
Cow position: chr7:8089340-8089194 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 81, 92

Conread position: 102-196
Cow position: chr7:25263539-25263445 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 102-197
Cow position: chr7:35754843-35754748 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 102-197
Cow position: chr7:41122096-41122191 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 102-213
Cow position: chr7:53996471-53996360 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 102-219
Cow position: chr7:27290328-27290445 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 102-241
Cow position: chr7:18388228-18388371 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 111, 0

Conread position: 109-195
Cow position: chr7:11549828-11549741 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 78
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 109-197
Cow position: chr7:44596538-44596626 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 77
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-206
Cow position: chr7:26309505-26309602 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-216
Cow position: chr7:60121716-60121610 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 109-222
Cow position: chr7:40414833-40414946 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-222
Cow position: chr7:43450705-43450592 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-240
Cow position: chr7:9137002-9136867 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 110, 0

Conread position: 109-240
Cow position: chr7:11015846-11015711 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 109-240
Cow position: chr7:36774532-36774397 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 109-240
Cow position: chr7:57258859-57258994 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 109-240
Cow position: chr7:68857424-68857557 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 109-241
Cow position: chr7:23936275-23936140 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 108, 130

Conread position: 109-241
Cow position: chr7:39947085-39947221 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 109-241
Cow position: chr7:40710292-40710155 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 110-206
Cow position: chr7:10795996-10795900 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 110-240
Cow position: chr7:2894889-2894756 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 110-240
Cow position: chr7:25393462-25393334 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 20

Conread position: 110-240
Cow position: chr7:29505278-29505144 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 104, 0

Conread position: 110-240
Cow position: chr7:50166192-50166058 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 110-240
Cow position: chr7:53653146-53653012 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 109, 0

Conread position: 110-241
Cow position: chr7:3256182-3256317 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 99, 0

Conread position: 112-211
Cow position: chr7:50858114-50858015 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 290-507
Cow position: chr7:28544065-28544288 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 8, 37

Conread position: 52-241
Cow position: chr8:39174055-39174246 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 122, 23

Conread position: 53-218
Cow position: chr8:47462045-47461883 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 36

Conread position: 57-194
Cow position: chr8:48524770-48524910 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 64-240
Cow position: chr8:48512832-48513015 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 74-205
Cow position: chr8:5877814-5877680 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 81-195
Cow position: chr8:24971029-24970913 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 81-195
Cow position: chr8:43163537-43163656 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 84-188
Cow position: chr8:6232726-6232838 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 87-239
Cow position: chr8:10082053-10081904 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 112, 21

Conread position: 87-241
Cow position: chr8:54052463-54052305 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 128, 0

Conread position: 87-241
Cow position: chr8:55089688-55089852 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 87-241
Cow position: chr8:60339762-60339922 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 87-242
Cow position: chr8:45664903-45664743 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 87-243
Cow position: chr8:26315338-26315496 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 105, 133

Conread position: 88-196
Cow position: chr8:25649525-25649635 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 88-239
Cow position: chr8:53429931-53429774 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 88-240
Cow position: chr8:20157605-20157762 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 88-241
Cow position: chr8:10846391-10846236 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 118, 30

Conread position: 89-206
Cow position: chr8:50282030-50281912 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 90-195
Cow position: chr8:55348491-55348381 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 90-196
Cow position: chr8:19860515-19860623 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 90-196
Cow position: chr8:24419123-24419231 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 96
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 90-197
Cow position: chr8:31767875-31767989 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 107

Conread position: 90-206
Cow position: chr8:44568954-44568837 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 90-213
Cow position: chr8:21776075-21775950 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 90-213
Cow position: chr8:38711750-38711622 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 90-219
Cow position: chr8:45149640-45149768 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 90-240
Cow position: chr8:15391005-15391157 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 90-240
Cow position: chr8:37709300-37709148 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 112, 28

Conread position: 90-241
Cow position: chr8:5477691-5477854 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 93-195
Cow position: chr8:4821028-4821132 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 93-237
Cow position: chr8:53587169-53587316 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 23, 127

Conread position: 93-238
Cow position: chr8:37443682-37443532 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 85

Conread position: 93-240
Cow position: chr8:642428-642576 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 126, 91

Conread position: 93-240
Cow position: chr8:32192837-32192688 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 113, 22

Conread position: 95-187
Cow position: chr8:4557758-4557852 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 98-206
Cow position: chr8:38993876-38993769 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 102-196
Cow position: chr8:3762288-3762194 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 102-196
Cow position: chr8:20339415-20339321 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 102-206
Cow position: chr8:55214388-55214284 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 102-223
Cow position: chr8:55725629-55725749 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 102-240
Cow position: chr8:45127562-45127705 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 102-244
Cow position: chr8:52197319-52197463 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 104, 47

Conread position: 107-213
Cow position: chr8:54197744-54197850 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-196
Cow position: chr8:5546271-5546184 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 79
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 109-199
Cow position: chr8:45879167-45879077 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 82
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 109-199
Cow position: chr8:45925749-45925659 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 83
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 109-207
Cow position: chr8:33926290-33926193 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 109-213
Cow position: chr8:28884970-28884866 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 109-213
Cow position: chr8:38811435-38811331 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-234
Cow position: chr8:11148508-11148633 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 115, 15

Conread position: 109-238
Cow position: chr8:43153557-43153690 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 109-239
Cow position: chr8:16505624-16505494 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 107, 94

Conread position: 109-239
Cow position: chr8:42762298-42762432 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 109-240
Cow position: chr8:6616658-6616793 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 109-240
Cow position: chr8:16144263-16144128 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 109-240
Cow position: chr8:20783131-20783264 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 109-240
Cow position: chr8:21600579-21600444 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 109-240
Cow position: chr8:21911769-21911634 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 110, 0

Conread position: 109-240
Cow position: chr8:25388272-25388138 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 109-240
Cow position: chr8:43104161-43104296 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 109-241
Cow position: chr8:17167703-17167567 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 109-241
Cow position: chr8:36490002-36489866 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 105, 0

Conread position: 110-238
Cow position: chr8:25751742-25751870 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 96
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 110-240
Cow position: chr8:5884559-5884693 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 111-241
Cow position: chr8:38861571-38861705 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 98, 110

Conread position: 111-241
Cow position: chr8:45126104-45126238 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 87, 110

Conread position: 113-213
Cow position: chr8:8283171-8283271 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 113-240
Cow position: chr8:54177587-54177717 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 102, 5

Conread position: 114-206
Cow position: chr8:10832306-10832398 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 349-507
Cow position: chr8:6485011-6484851 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 50

Conread position: 350-507
Cow position: chr8:15856893-15857053 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 69

Conread position: 87-240
Cow position: chr9:7806080-7805919 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 129
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 28, 0

Conread position: 87-240
Cow position: chr9:10650416-10650258 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 85

Conread position: 87-241
Cow position: chr9:6951986-6952146 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 111, 0

Conread position: 87-241
Cow position: chr9:28747644-28747477 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 88-196
Cow position: chr9:54681395-54681503 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 29, 44

Conread position: 88-206
Cow position: chr9:765881-766001 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 88-213
Cow position: chr9:52648971-52648846 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 88-213
Cow position: chr9:63785034-63784903 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 88-223
Cow position: chr9:34135602-34135737 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 48

Conread position: 88-238
Cow position: chr9:42586673-42586516 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 88-240
Cow position: chr9:34973825-34973670 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 124, 30

Conread position: 88-240
Cow position: chr9:39148957-39149121 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 88-240
Cow position: chr9:54051667-54051816 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 131, 7

Conread position: 89-213
Cow position: chr9:5433521-5433643 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 89-213
Cow position: chr9:18003307-18003181 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 25, 81

Conread position: 90-195
Cow position: chr9:40586947-40587053 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 90-195
Cow position: chr9:61847238-61847131 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 90-213
Cow position: chr9:34917300-34917174 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 90-238
Cow position: chr9:25400310-25400161 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 29

Conread position: 90-239
Cow position: chr9:44584478-44584634 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 90-241
Cow position: chr9:22443746-22443584 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 90-241
Cow position: chr9:41785098-41785253 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 54

Conread position: 90-241
Cow position: chr9:51721010-51720857 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 93-206
Cow position: chr9:19902971-19903086 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 93-241
Cow position: chr9:9459869-9460024 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 97-240
Cow position: chr9:43443700-43443843 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 55, 15

Conread position: 98-206
Cow position: chr9:28354412-28354521 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 98-239
Cow position: chr9:1878106-1877965 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 98-240
Cow position: chr9:20637268-20637415 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 26, 70

Conread position: 102-195
Cow position: chr9:34423521-34423614 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 102-206
Cow position: chr9:9091205-9091101 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 102-212
Cow position: chr9:9815313-9815423 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 102-217
Cow position: chr9:50977353-50977237 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 102-240
Cow position: chr9:1729776-1729632 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 102-244
Cow position: chr9:4268084-4267937 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 143

Conread position: 108-240
Cow position: chr9:41282921-41283057 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 109, 0

Conread position: 109-194
Cow position: chr9:35932907-35932822 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 75
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-196
Cow position: chr9:8645173-8645260 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-198
Cow position: chr9:20828813-20828902 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 78
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-213
Cow position: chr9:6839901-6840004 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 109-213
Cow position: chr9:12786566-12786462 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-213
Cow position: chr9:52598814-52598710 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-219
Cow position: chr9:17411286-17411176 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 109-222
Cow position: chr9:43342238-43342351 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-238
Cow position: chr9:35105883-35105750 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 95, 0

Conread position: 109-239
Cow position: chr9:39011562-39011428 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 109-240
Cow position: chr9:11319727-11319592 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 109-240
Cow position: chr9:35167083-35167218 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 109-241
Cow position: chr9:8562729-8562863 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 86, 110

Conread position: 109-241
Cow position: chr9:9311765-9311901 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 106, 0

Conread position: 109-241
Cow position: chr9:9686505-9686371 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 109-241
Cow position: chr9:19067691-19067825 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 10

Conread position: 109-241
Cow position: chr9:26279262-26279126 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 89, 112

Conread position: 109-244
Cow position: chr9:28378875-28379012 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 95, 129

Conread position: 111-224
Cow position: chr9:11427568-11427680 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 110, 0

Conread position: 111-238
Cow position: chr9:55084392-55084264 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 105, 64

Conread position: 111-240
Cow position: chr9:39758427-39758560 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 111-240
Cow position: chr9:64559973-64559841 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 113-239
Cow position: chr9:44822413-44822283 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 106, 0

Conread position: 113-240
Cow position: chr9:34014338-34014207 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 114-238
Cow position: chr9:8992268-8992139 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 115-241
Cow position: chr9:5219259-5219127 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 351-507
Cow position: chr9:41728376-41728220 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 60

Conread position: 52-238
Cow position: chrX:11717580-11717767 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 154, 43

Conread position: 64-241
Cow position: chrX:4152832-4153018 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 64-241
Cow position: chrX:23089047-23088869 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 23, 47

Conread position: 67-241
Cow position: chrX:31312219-31312042 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 22

Conread position: 72-238
Cow position: chrX:31442638-31442813 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 74-241
Cow position: chrX:42927631-42927811 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 76-241
Cow position: chrX:4467148-4466980 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 11, 44

Conread position: 82-193
Cow position: chrX:18637669-18637557 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 83-195
Cow position: chrX:25232170-25232060 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 83-241
Cow position: chrX:1087960-1088127 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 29, 143

Conread position: 87-240
Cow position: chrX:34836887-34837050 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 87-241
Cow position: chrX:20584496-20584341 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 130, 24

Conread position: 88-206
Cow position: chrX:46072647-46072765 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 88-238
Cow position: chrX:38964280-38964124 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 88-240
Cow position: chrX:25412074-25411921 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 127, 18

Conread position: 88-240
Cow position: chrX:41123228-41123076 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 129, 35

Conread position: 90-195
Cow position: chrX:40567786-40567684 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 90-206
Cow position: chrX:25925474-25925590 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 90-213
Cow position: chrX:24054840-24054722 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 90-216
Cow position: chrX:35885551-35885685 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 90-222
Cow position: chrX:2551258-2551127 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 95, 31

Conread position: 92-222
Cow position: chrX:41809996-41810132 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 95-213
Cow position: chrX:42894090-42893971 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 95-239
Cow position: chrX:16984803-16984656 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 122, 47

Conread position: 98-241
Cow position: chrX:27145764-27145617 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 98-241
Cow position: chrX:41192864-41192717 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 119, 0

Conread position: 99-213
Cow position: chrX:46068599-46068714 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 99-241
Cow position: chrX:31436633-31436487 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 118, 0

Conread position: 100-206
Cow position: chrX:38728892-38728786 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 102-213
Cow position: chrX:35681722-35681612 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 102-223
Cow position: chrX:35285329-35285208 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 102-238
Cow position: chrX:6278342-6278482 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 102-238
Cow position: chrX:10516409-10516269 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 102-239
Cow position: chrX:37129425-37129284 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 104, 0

Conread position: 102-240
Cow position: chrX:6407699-6407560 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 115, 82

Conread position: 102-240
Cow position: chrX:39180078-39180219 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 104, 55

Conread position: 102-241
Cow position: chrX:13177320-13177465 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 102-241
Cow position: chrX:31489676-31489533 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 108-222
Cow position: chrX:46587972-46587858 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 89
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 108-241
Cow position: chrX:29501734-29501868 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 109-195
Cow position: chrX:16481421-16481507 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 75
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-195
Cow position: chrX:34270710-34270624 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-196
Cow position: chrX:11653919-11653832 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 79
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 109-196
Cow position: chrX:26881931-26882018 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-196
Cow position: chrX:32747881-32747794 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 76
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-196
Cow position: chrX:33640124-33640037 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 76
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-202
Cow position: chrX:6480447-6480540 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 79
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-202
Cow position: chrX:41027308-41027215 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-205
Cow position: chrX:27270525-27270428 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 109-213
Cow position: chrX:5872466-5872362 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 109-213
Cow position: chrX:20583815-20583711 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 109-222
Cow position: chrX:2314470-2314583 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-222
Cow position: chrX:28878025-28878138 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-237
Cow position: chrX:20345599-20345470 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 109-240
Cow position: chrX:3806830-3806696 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 110, 9

Conread position: 109-240
Cow position: chrX:22914893-22915026 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 110, 57

Conread position: 109-240
Cow position: chrX:27393877-27394012 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 109-240
Cow position: chrX:38094372-38094502 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 104, 14

Conread position: 109-240
Cow position: chrX:40680763-40680628 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 109-241
Cow position: chrX:27668809-27668945 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 109-241
Cow position: chrX:36976100-36975965 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 109-241
Cow position: chrX:40531894-40532030 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 110-207
Cow position: chrX:42380964-42381061 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 110-216
Cow position: chrX:31983437-31983541 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 110-240
Cow position: chrX:27667573-27667447 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 110-240
Cow position: chrX:31829313-31829447 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 109, 0

Conread position: 111-240
Cow position: chrX:1122400-1122529 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 102, 106

Conread position: 111-241
Cow position: chrX:17966487-17966354 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 93, 6

Conread position: 112-237
Cow position: chrX:29601682-29601811 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 114-240
Cow position: chrX:42247038-42247168 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 109, 0

Conread position: 114-240
Cow position: chrX:42449870-42450000 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 114-241
Cow position: chrX:11656225-11656094 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 103, 0

Conread position: 115-240
Cow position: chrX:42855601-42855472 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 116-241
Cow position: chrX:41941765-41941636 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 118-240
Cow position: chrX:46429679-46429805 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 119-244
Cow position: chrX:29680122-29680250 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 98, 123

Conread position: 346-507
Cow position: chrX:1466095-1466258 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 350-507
Cow position: chrX:34411781-34411942 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 350-507
Cow position: chrX:37781172-37781013 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 361-508
Cow position: chrX:5919440-5919589 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 0