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Cow genome map

           
Conread name:
           
Lym2-sn74_D08.f
        

               
Conread position:
               
20-238
               

               
Cow position:
               
chr1:20384813-20385041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr1:81228532-81228745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
113, 29
               

               
Conread position:
               
20-246
               

               
Cow position:
               
chr1:101822690-101822919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
113, 39
               

               
Conread position:
               
54-238
               

               
Cow position:
               
chr1:26702424-26702613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
76, 40
               

               
Conread position:
               
80-238
               

               
Cow position:
               
chr1:82338061-82338233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 14
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr10:30456079-30456297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
104, 6
               

               
Conread position:
               
21-246
               

               
Cow position:
               
chr10:62286327-62286098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
111, 37
               

               
Conread position:
               
24-238
               

               
Cow position:
               
chr10:12392830-12393041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
109, 39
               

               
Conread position:
               
26-238
               

               
Cow position:
               
chr10:65345679-65345905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
107, 69
               

               
Conread position:
               
49-238
               

               
Cow position:
               
chr10:35828702-35828897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
82, 43
               

               
Conread position:
               
65-239
               

               
Cow position:
               
chr10:24744012-24743832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
68, 27
               

               
Conread position:
               
84-246
               

               
Cow position:
               
chr10:60355789-60355618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
49, 169
               

               
Conread position:
               
130-246
               

               
Cow position:
               
chr10:11212470-11212354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
69, 114
               

               
Conread position:
               
6-238
               

               
Cow position:
               
chr11:56751592-56751821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
126, 11
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr11:16251466-16251697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr11:16795370-16795589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
113, 9
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr11:23128757-23128993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr11:68570889-68571113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 72
               

               
Conread position:
               
22-238
               

               
Cow position:
               
chr11:2911040-2911253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
124, 70
               

               
Conread position:
               
22-238
               

               
Cow position:
               
chr11:7924809-7925033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
22-238
               

               
Cow position:
               
chr11:50197664-50197885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
111, 60
               

               
Conread position:
               
78-247
               

               
Cow position:
               
chr11:40609028-40609205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 42
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr12:3950588-3950797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
176, 79
               

               
Conread position:
               
25-238
               

               
Cow position:
               
chr12:18943886-18944113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
34, 73
               

               
Conread position:
               
49-243
               

               
Cow position:
               
chr12:35537722-35537922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
82, 43
               

               
Conread position:
               
63-238
               

               
Cow position:
               
chr12:8673193-8673373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 29
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr13:46181973-46182181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
179, 28
               

               
Conread position:
               
20-246
               

               
Cow position:
               
chr13:16247837-16248071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
98, 60
               

               
Conread position:
               
20-246
               

               
Cow position:
               
chr13:52922272-52922516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
66, 140
               

               
Conread position:
               
22-238
               

               
Cow position:
               
chr13:54237532-54237745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
177, 45
               

               
Conread position:
               
82-238
               

               
Cow position:
               
chr13:9734185-9734357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr14:28708274-28708493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
112, 36
               

               
Conread position:
               
31-239
               

               
Cow position:
               
chr14:8784429-8784642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
96, 29
               

               
Conread position:
               
47-246
               

               
Cow position:
               
chr14:28520312-28520515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
84, 45
               

               
Conread position:
               
53-246
               

               
Cow position:
               
chr14:46532950-46533147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
78, 39
               

               
Conread position:
               
80-239
               

               
Cow position:
               
chr14:45778020-45777852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
12-252
               

               
Cow position:
               
chr15:13077210-13076967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
9, 81
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr15:363306-363525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
97, 72
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr15:42143140-42143361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
5, 39
               

               
Conread position:
               
20-239
               

               
Cow position:
               
chr15:6647734-6647961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
101-238
               

               
Cow position:
               
chr15:21894185-21894329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
32, 90
               

               
Conread position:
               
125-238
               

               
Cow position:
               
chr15:31858251-31858365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr16:8448861-8449081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
113, 72
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr16:11099996-11100217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
112, 24
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr16:31122449-31122677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 74
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr16:37924367-37924585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
113, 31
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr16:42079041-42079261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 32
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr16:51598802-51599025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
113, 38
               

               
Conread position:
               
20-239
               

               
Cow position:
               
chr16:13307065-13307289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
113, 24
               

               
Conread position:
               
20-246
               

               
Cow position:
               
chr16:40333524-40333751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
20-246
               

               
Cow position:
               
chr16:49449549-49449776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
113, 15
               

               
Conread position:
               
23-246
               

               
Cow position:
               
chr16:831780-832011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
109, 69
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr17:12289573-12289801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
31-238
               

               
Cow position:
               
chr17:34208285-34208497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
102, 27
               

               
Conread position:
               
78-238
               

               
Cow position:
               
chr17:24787273-24787445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr18:13172753-13172981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
39, 75
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr18:20641716-20641933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
98, 62
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr18:55589706-55589929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
100, 62
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr18:55699405-55699629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
113, 29
               

               
Conread position:
               
20-239
               

               
Cow position:
               
chr18:7487021-7486796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 72
               

               
Conread position:
               
20-246
               

               
Cow position:
               
chr18:52632635-52632883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
40, 246
               

               
Conread position:
               
22-246
               

               
Cow position:
               
chr18:23630810-23631040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
111, 60
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr18:4556625-4556841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
104, 63
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr19:2138315-2138525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
181, 62
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr19:33932351-33932577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 74
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr19:46181024-46181241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
39, 63
               

               
Conread position:
               
20-246
               

               
Cow position:
               
chr19:10786569-10786799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
113, 72
               

               
Conread position:
               
95-238
               

               
Cow position:
               
chr19:18016168-18016317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
32, 104
               

               
Conread position:
               
129-238
               

               
Cow position:
               
chr19:4588325-4588433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr2:27337973-27338209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
62, 38
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr2:35948864-35949105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr2:45462773-45462993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
107, 29
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr2:45912837-45913057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
119, 38
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr2:59397257-59397481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
113, 74
               

               
Conread position:
               
20-241
               

               
Cow position:
               
chr2:70908514-70908746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
20-246
               

               
Cow position:
               
chr2:61974597-61974354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
39, 241
               

               
Conread position:
               
21-238
               

               
Cow position:
               
chr2:47453837-47454053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
112, 27
               

               
Conread position:
               
22-239
               

               
Cow position:
               
chr2:76314059-76314273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
110, 30
               

               
Conread position:
               
35-239
               

               
Cow position:
               
chr2:12802868-12803073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
54, 60
               

               
Conread position:
               
78-250
               

               
Cow position:
               
chr2:296696-296873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
53, 14
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr20:581077-581301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
74, 38
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr20:31845737-31845961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
101, 72
               

               
Conread position:
               
22-238
               

               
Cow position:
               
chr20:19363520-19363741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
110, 70
               

               
Conread position:
               
24-246
               

               
Cow position:
               
chr20:19410529-19410755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
109, 44
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr21:8125935-8126145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
113, 24
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr21:32297646-32297861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
113, 24
               

               
Conread position:
               
20-239
               

               
Cow position:
               
chr21:28442609-28442376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
69, 194
               

               
Conread position:
               
20-246
               

               
Cow position:
               
chr21:20925642-20925871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
20-246
               

               
Cow position:
               
chr21:36297343-36297130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
21-250
               

               
Cow position:
               
chr21:42190305-42190529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
180, 28
               

               
Conread position:
               
23-238
               

               
Cow position:
               
chr21:1765340-1765565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
107, 69
               

               
Conread position:
               
41-238
               

               
Cow position:
               
chr21:28907994-28908189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
38, 26
               

               
Conread position:
               
131-238
               

               
Cow position:
               
chr21:49702505-49702613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
7-238
               

               
Cow position:
               
chr22:31870442-31870677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr22:644963-645161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
181, 43
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr22:11370793-11371001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
155, 72
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr22:14882312-14882537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
19, 73
               

               
Conread position:
               
20-239
               

               
Cow position:
               
chr22:10302808-10302584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
88, 109
               

               
Conread position:
               
20-242
               

               
Cow position:
               
chr22:23741906-23742132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
112, 72
               

               
Conread position:
               
49-238
               

               
Cow position:
               
chr22:14370437-14370629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
82, 43
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr23:6179903-6180125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
59, 94
               

               
Conread position:
               
22-238
               

               
Cow position:
               
chr23:3208818-3209037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
91, 35
               

               
Conread position:
               
20-239
               

               
Cow position:
               
chr24:18741794-18742018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 72
               

               
Conread position:
               
20-257
               

               
Cow position:
               
chr24:44987595-44987838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
21-238
               

               
Cow position:
               
chr24:28553769-28554001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
112, 37
               

               
Conread position:
               
22-239
               

               
Cow position:
               
chr24:17763476-17763718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
23-238
               

               
Cow position:
               
chr24:29596042-29596253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr25:6891720-6891957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
78-238
               

               
Cow position:
               
chr25:12081612-12081777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
55, 14
               

               
Conread position:
               
82-238
               

               
Cow position:
               
chr25:27510520-27510685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 11
               

               
Conread position:
               
49-238
               

               
Cow position:
               
chr26:22805147-22805341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
82, 43
               

               
Conread position:
               
135-238
               

               
Cow position:
               
chr26:11129380-11129485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr27:22440295-22440521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr27:26141949-26142173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
109, 72
               

               
Conread position:
               
22-238
               

               
Cow position:
               
chr27:16822971-16823185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
108, 70
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr28:26922558-26922793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
68, 38
               

               
Conread position:
               
22-239
               

               
Cow position:
               
chr28:17598917-17599146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
49-242
               

               
Cow position:
               
chr28:32362545-32362345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
82, 43
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr29:6217747-6217985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
21-238
               

               
Cow position:
               
chr29:35405995-35406209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
111, 71
               

               
Conread position:
               
40-239
               

               
Cow position:
               
chr29:36428512-36428710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
49-253
               

               
Cow position:
               
chr29:13623370-13623580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
82, 43
               

               
Conread position:
               
130-238
               

               
Cow position:
               
chr29:31594384-31594493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
20-253
               

               
Cow position:
               
chr3:49132477-49132716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
24-239
               

               
Cow position:
               
chr3:50768452-50768228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
81, 34
               

               
Conread position:
               
32-238
               

               
Cow position:
               
chr3:73930638-73930845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
101, 50
               

               
Conread position:
               
86-238
               

               
Cow position:
               
chr3:75157477-75157637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 28
               

               
Conread position:
               
19-239
               

               
Cow position:
               
chr4:13142737-13142954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
114, 39
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr4:2671475-2671693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
80, 38
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr4:19497456-19497677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
81, 72
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr4:20139726-20139957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
66, 38
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr4:61999660-61999881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
99, 39
               

               
Conread position:
               
20-246
               

               
Cow position:
               
chr4:39231729-39231965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
110, 73
               

               
Conread position:
               
22-238
               

               
Cow position:
               
chr4:19502009-19502233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
38, 61
               

               
Conread position:
               
24-238
               

               
Cow position:
               
chr4:10993761-10993973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
182, 34
               

               
Conread position:
               
26-246
               

               
Cow position:
               
chr4:65972660-65972880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
105, 41
               

               
Conread position:
               
49-238
               

               
Cow position:
               
chr4:18599678-18599873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
82, 43
               

               
Conread position:
               
78-238
               

               
Cow position:
               
chr4:45073762-45073937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
89-238
               

               
Cow position:
               
chr4:66548053-66548217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr5:14630084-14630305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
113, 24
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr5:25231186-25231405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 73
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr5:72045814-72046041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
113, 72
               

               
Conread position:
               
21-245
               

               
Cow position:
               
chr5:51761344-51761580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
98, 71
               

               
Conread position:
               
22-238
               

               
Cow position:
               
chr5:19813389-19813617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
31, 13
               

               
Conread position:
               
24-246
               

               
Cow position:
               
chr5:55232961-55233173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
175, 23
               

               
Conread position:
               
70-238
               

               
Cow position:
               
chr5:5812310-5812481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
63, 22
               

               
Conread position:
               
21-246
               

               
Cow position:
               
chr6:31635848-31636084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
72, 15
               

               
Conread position:
               
22-246
               

               
Cow position:
               
chr6:5302565-5302788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
93, 68
               

               
Conread position:
               
22-266
               

               
Cow position:
               
chr6:11192613-11192861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
111, 70
               

               
Conread position:
               
24-238
               

               
Cow position:
               
chr6:42106216-42106429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
105, 15
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr6:9737281-9737497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
91, 29
               

               
Conread position:
               
49-242
               

               
Cow position:
               
chr6:9226480-9226281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
82, 43
               

               
Conread position:
               
79-238
               

               
Cow position:
               
chr6:47640711-47640885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
21, 41
               

               
Conread position:
               
101-247
               

               
Cow position:
               
chr6:51581630-51581785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
32, 148
               

               
Conread position:
               
130-246
               

               
Cow position:
               
chr6:29484838-29484722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
69, 114
               

               
Conread position:
               
19-247
               

               
Cow position:
               
chr7:11869986-11870221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr7:35652237-35652457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
81, 38
               

               
Conread position:
               
20-239
               

               
Cow position:
               
chr7:18247967-18248190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
113, 72
               

               
Conread position:
               
20-239
               

               
Cow position:
               
chr7:53053563-53053773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
114, 49
               

               
Conread position:
               
20-247
               

               
Cow position:
               
chr7:50075883-50076113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
98, 60
               

               
Conread position:
               
23-238
               

               
Cow position:
               
chr7:10369308-10369541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
63, 36
               

               
Conread position:
               
37-238
               

               
Cow position:
               
chr7:9928583-9928801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr8:6438333-6438561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr8:24872058-24872281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
113, 29
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr8:31266375-31266605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr8:60488814-60489041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
33, 52
               

               
Conread position:
               
20-239
               

               
Cow position:
               
chr8:59250537-59250320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
72, 43
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr9:5393279-5393489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
179, 32
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr9:8998583-8998805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
113, 62
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr9:56773307-56773537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
109, 72
               

               
Conread position:
               
24-238
               

               
Cow position:
               
chr9:53602645-53602869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
92, 52
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr9:4126299-4126497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
90, 25
               

               
Conread position:
               
83-238
               

               
Cow position:
               
chr9:28656923-28657085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 11
               

               
Conread position:
               
131-252
               

               
Cow position:
               
chr9:33067561-33067683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
69, 109
               

               
Conread position:
               
3-238
               

               
Cow position:
               
chrX:38066869-38067109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
130, 20
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chrX:26625849-26626085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
22-238
               

               
Cow position:
               
chrX:20340065-20340285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
111, 70