Non-Coding RNA Search

Cow genome map


           Conread name:
           Lym2-sn76_H05.f
        

               Conread position:
               50-231
               

               Cow position:
               chr1:81364339-81364518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               154, 12
               

               Conread position:
               69-185
               

               Cow position:
               chr1:36237874-36237988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               73-198
               

               Cow position:
               chr1:50854009-50854133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               91-213
               

               Cow position:
               chr1:95152988-95153110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               90, 106
               

               Conread position:
               92-186
               

               Cow position:
               chr1:10610557-10610463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-192
               

               Cow position:
               chr1:49297766-49297866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-192
               

               Cow position:
               chr1:68710399-68710499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-193
               

               Cow position:
               chr1:71350609-71350508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr1:54258684-54258787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr1:63994440-63994338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr1:74084073-74083972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               92-196
               

               Cow position:
               chr1:64803982-64803878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-204
               

               Cow position:
               chr1:1915911-1915800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               92-205
               

               Cow position:
               chr1:91912447-91912563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               92-208
               

               Cow position:
               chr1:36306793-36306907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               92-208
               

               Cow position:
               chr1:83677210-83677093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               92-208
               

               Cow position:
               chr1:89076506-89076392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               92-208
               

               Cow position:
               chr1:89146757-89146642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               97-193
               

               Cow position:
               chr1:90267844-90267940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               81
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-194
               

               Cow position:
               chr1:7597620-7597716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               81
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-194
               

               Cow position:
               chr1:57087973-57088069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               82
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-205
               

               Cow position:
               chr1:95513961-95514069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               99-212
               

               Cow position:
               chr1:35600168-35600055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               198-441
               

               Cow position:
               chr1:58810246-58810489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 18
               

               Conread position:
               64-184
               

               Cow position:
               chr10:9959276-9959396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               11, 24
               

               Conread position:
               65-197
               

               Cow position:
               chr10:35638082-35637952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               69-205
               

               Cow position:
               chr10:15602114-15601980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               124, 18
               

               Conread position:
               69-210
               

               Cow position:
               chr10:17518781-17518642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               74-193
               

               Cow position:
               chr10:63757982-63757863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               89-194
               

               Cow position:
               chr10:16524244-16524138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               86
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               92-183
               

               Cow position:
               chr10:16598776-16598867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               80
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-183
               

               Cow position:
               chr10:28571487-28571578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               78
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-183
               

               Cow position:
               chr10:42574114-42574205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               78
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-193
               

               Cow position:
               chr10:19394365-19394265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               92-195
               

               Cow position:
               chr10:18155407-18155510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-196
               

               Cow position:
               chr10:65071407-65071511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               84
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-206
               

               Cow position:
               chr10:6719062-6719177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               92-221
               

               Cow position:
               chr10:25149971-25150104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               94-183
               

               Cow position:
               chr10:45378913-45378825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               79
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               94-202
               

               Cow position:
               chr10:16830297-16830189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-201
               

               Cow position:
               chr10:20997085-20996978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               97-197
               

               Cow position:
               chr10:49846868-49846965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               98-194
               

               Cow position:
               chr10:47182475-47182380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               83
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               98-195
               

               Cow position:
               chr10:4711691-4711788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               81
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-212
               

               Cow position:
               chr10:36531634-36531521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               99-187
               

               Cow position:
               chr10:38370360-38370272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               89
               

               Alignm identity:
               77
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               106-206
               

               Cow position:
               chr10:22959688-22959589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               64-208
               

               Cow position:
               chr11:24551455-24551598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               11, 121
               

               Conread position:
               69-213
               

               Cow position:
               chr11:64607177-64607033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               29, 142
               

               Conread position:
               73-213
               

               Cow position:
               chr11:5559359-5559498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               118, 18
               

               Conread position:
               74-194
               

               Cow position:
               chr11:21124532-21124414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               91-194
               

               Cow position:
               chr11:75479930-75479829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               91-204
               

               Cow position:
               chr11:21830118-21830006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               92-183
               

               Cow position:
               chr11:25968760-25968669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               79
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-193
               

               Cow position:
               chr11:51683309-51683410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               86
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr11:28092544-28092646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr11:36847262-36847365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr11:37100079-37099976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr11:42084581-42084478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               92-195
               

               Cow position:
               chr11:53460791-53460897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               92-199
               

               Cow position:
               chr11:72568373-72568265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               92-206
               

               Cow position:
               chr11:29677300-29677414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-211
               

               Cow position:
               chr11:41278280-41278397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               92-228
               

               Cow position:
               chr11:1932063-1932196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               93-189
               

               Cow position:
               chr11:10294484-10294580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               81
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-194
               

               Cow position:
               chr11:35801616-35801712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               81
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               100-205
               

               Cow position:
               chr11:27932403-27932508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               74-203
               

               Cow position:
               chr12:6188056-6187928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               92-193
               

               Cow position:
               chr12:8143742-8143643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               86
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               92-193
               

               Cow position:
               chr12:22047995-22048097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr12:37480766-37480664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               84
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               93-208
               

               Cow position:
               chr12:35217960-35217845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               97-207
               

               Cow position:
               chr12:6719466-6719578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               98-195
               

               Cow position:
               chr12:7539709-7539612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               82
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               102-199
               

               Cow position:
               chr12:42570071-42570169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               82
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               64-192
               

               Cow position:
               chr13:369221-369349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               35, 17
               

               Conread position:
               66-186
               

               Cow position:
               chr13:8482064-8481940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               68-183
               

               Cow position:
               chr13:21955170-21955284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               69-193
               

               Cow position:
               chr13:25978296-25978420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               118, 5
               

               Conread position:
               75-194
               

               Cow position:
               chr13:29802520-29802402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               14, 75
               

               Conread position:
               92-191
               

               Cow position:
               chr13:2776161-2776062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               82
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-192
               

               Cow position:
               chr13:14411768-14411665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               88
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               92-193
               

               Cow position:
               chr13:19182795-19182894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr13:3153624-3153522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr13:20042387-20042489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr13:30396595-30396491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               92-204
               

               Cow position:
               chr13:37030226-37030113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               95, 110
               

               Conread position:
               92-212
               

               Cow position:
               chr13:2529075-2529195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-212
               

               Cow position:
               chr13:48126981-48126861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-243
               

               Cow position:
               chr13:11146930-11146781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               149, 107
               

               Conread position:
               97-203
               

               Cow position:
               chr13:52929303-52929196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               99-229
               

               Cow position:
               chr13:31398326-31398197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               100-208
               

               Cow position:
               chr13:12302516-12302626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               102-194
               

               Cow position:
               chr13:16709681-16709589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               68-197
               

               Cow position:
               chr14:12071572-12071700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               120, 23
               

               Conread position:
               69-205
               

               Cow position:
               chr14:10609631-10609499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               79-205
               

               Cow position:
               chr14:21018724-21018599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               91-194
               

               Cow position:
               chr14:12073022-12073126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               92-186
               

               Cow position:
               chr14:15518470-15518564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               79
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-193
               

               Cow position:
               chr14:27044856-27044958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               88
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr14:27364510-27364408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               84
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-206
               

               Cow position:
               chr14:19988129-19988243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               89
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-207
               

               Cow position:
               chr14:36559294-36559409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               82, 47
               

               Conread position:
               92-209
               

               Cow position:
               chr14:18941355-18941472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-217
               

               Cow position:
               chr14:28304854-28304982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               98-204
               

               Cow position:
               chr14:29011119-29011226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               98-206
               

               Cow position:
               chr14:30050021-30050128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               101-198
               

               Cow position:
               chr14:30260676-30260576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               85
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               74-207
               

               Cow position:
               chr15:7750919-7751048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               110, 17
               

               Conread position:
               91-229
               

               Cow position:
               chr15:36539925-36539785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               101, 126
               

               Conread position:
               92-184
               

               Cow position:
               chr15:19553946-19554038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               81
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-185
               

               Cow position:
               chr15:44119490-44119582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               80
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               92-193
               

               Cow position:
               chr15:40562703-40562804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr15:17124491-17124593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr15:43020660-43020762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               83
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-202
               

               Cow position:
               chr15:23572709-23572819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               88
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-233
               

               Cow position:
               chr15:36435182-36435041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               100, 120
               

               Conread position:
               97-194
               

               Cow position:
               chr15:42142848-42142751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               82
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-228
               

               Cow position:
               chr15:26522851-26522980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               62-194
               

               Cow position:
               chr16:7928300-7928169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               124, 29
               

               Conread position:
               64-194
               

               Cow position:
               chr16:50409330-50409462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               69-194
               

               Cow position:
               chr16:21442520-21442397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               69-195
               

               Cow position:
               chr16:56690046-56689922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               69-197
               

               Cow position:
               chr16:48455764-48455886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               74-194
               

               Cow position:
               chr16:31575241-31575359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               91-194
               

               Cow position:
               chr16:56082253-56082151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               91-199
               

               Cow position:
               chr16:47304003-47303895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr16:47274614-47274511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               92-198
               

               Cow position:
               chr16:24672750-24672646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               92-199
               

               Cow position:
               chr16:8065775-8065668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-204
               

               Cow position:
               chr16:7583508-7583617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               92-207
               

               Cow position:
               chr16:40029774-40029663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               92-215
               

               Cow position:
               chr16:17209194-17209069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               92-222
               

               Cow position:
               chr16:38581115-38581246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               93-194
               

               Cow position:
               chr16:38852690-38852587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               87
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               93-197
               

               Cow position:
               chr16:11083107-11083211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-193
               

               Cow position:
               chr16:22739063-22738968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               83
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-201
               

               Cow position:
               chr16:48364464-48364567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-226
               

               Cow position:
               chr16:21044415-21044544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               102-199
               

               Cow position:
               chr16:24138631-24138533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               83
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               60-191
               

               Cow position:
               chr17:17772297-17772169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               64-196
               

               Cow position:
               chr17:39964002-39964133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               129, 27
               

               Conread position:
               68-193
               

               Cow position:
               chr17:10037538-10037661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               68-209
               

               Cow position:
               chr17:37973936-37973788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               92-192
               

               Cow position:
               chr17:15334343-15334243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr17:15883825-15883927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-202
               

               Cow position:
               chr17:15355084-15355195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               92-204
               

               Cow position:
               chr17:36814515-36814624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               92-212
               

               Cow position:
               chr17:7674660-7674540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               100-193
               

               Cow position:
               chr17:11387121-11387214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               80
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               100-194
               

               Cow position:
               chr17:4817688-4817782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               81
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               41-194
               

               Cow position:
               chr18:20391235-20391384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 23
               

               Conread position:
               64-205
               

               Cow position:
               chr18:31557109-31556967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               69-210
               

               Cow position:
               chr18:53053176-53053034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr18:29188471-29188574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               92-205
               

               Cow position:
               chr18:37690227-37690342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               92-208
               

               Cow position:
               chr18:21751456-21751571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               92-221
               

               Cow position:
               chr18:27078943-27079072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               116, 87
               

               Conread position:
               92-252
               

               Cow position:
               chr18:44514166-44514327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               101, 150
               

               Conread position:
               93-202
               

               Cow position:
               chr18:2144647-2144757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               88
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               97-194
               

               Cow position:
               chr18:30385430-30385334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               82
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               64-181
               

               Cow position:
               chr19:2221002-2220885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               64-182
               

               Cow position:
               chr19:17354931-17355047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               64-204
               

               Cow position:
               chr19:24068211-24068073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               69-229
               

               Cow position:
               chr19:42217236-42217079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               78-193
               

               Cow position:
               chr19:19073906-19074023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               91-196
               

               Cow position:
               chr19:49958967-49959072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-184
               

               Cow position:
               chr19:43190027-43190119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               79
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-185
               

               Cow position:
               chr19:7794748-7794841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               81
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-196
               

               Cow position:
               chr19:42776532-42776636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               84
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-207
               

               Cow position:
               chr19:30227621-30227735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               92-212
               

               Cow position:
               chr19:6020981-6020862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               93
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               64-194
               

               Cow position:
               chr2:56021396-56021530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               69-194
               

               Cow position:
               chr2:32660269-32660393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               83, 23
               

               Conread position:
               85-194
               

               Cow position:
               chr2:56011053-56010943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               90-204
               

               Cow position:
               chr2:24116976-24116863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr2:67302128-67302230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr2:67810930-67810828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr2:74198217-74198115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-196
               

               Cow position:
               chr2:40508484-40508380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-203
               

               Cow position:
               chr2:38662588-38662476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               26, 106
               

               Conread position:
               92-205
               

               Cow position:
               chr2:36124543-36124657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               92-207
               

               Cow position:
               chr2:38953943-38954057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               95-204
               

               Cow position:
               chr2:45799813-45799705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               99-206
               

               Cow position:
               chr2:80999646-80999753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               99-208
               

               Cow position:
               chr2:38969368-38969257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               100-205
               

               Cow position:
               chr2:57391581-57391475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               103-194
               

               Cow position:
               chr2:62127169-62127079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               79
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               64-196
               

               Cow position:
               chr20:20892551-20892419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               69-206
               

               Cow position:
               chr20:41323230-41323097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               92-189
               

               Cow position:
               chr20:9730156-9730253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               81
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr20:17524427-17524529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               83
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-207
               

               Cow position:
               chr20:35310482-35310600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               97-194
               

               Cow position:
               chr20:24883203-24883106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               82
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               74-204
               

               Cow position:
               chr21:24296608-24296480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               92-189
               

               Cow position:
               chr21:15444909-15444812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               82
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-197
               

               Cow position:
               chr21:15305123-15305017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               92-203
               

               Cow position:
               chr21:20153130-20153241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-207
               

               Cow position:
               chr21:22718608-22718496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               93-204
               

               Cow position:
               chr21:29658448-29658559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               95-192
               

               Cow position:
               chr21:12348944-12349043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               95-194
               

               Cow position:
               chr21:8713781-8713682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-194
               

               Cow position:
               chr21:28882360-28882457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               82
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               96-194
               

               Cow position:
               chr21:32812940-32813038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               81
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-216
               

               Cow position:
               chr21:18578389-18578271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               101-206
               

               Cow position:
               chr21:42189578-42189474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               64-206
               

               Cow position:
               chr22:9075488-9075631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               11, 22
               

               Conread position:
               69-204
               

               Cow position:
               chr22:30606944-30607074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               92-189
               

               Cow position:
               chr22:6289393-6289296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               81
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr22:1588400-1588502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               10, 88
               

               Conread position:
               92-194
               

               Cow position:
               chr22:19413928-19413826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               84
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr22:33373351-33373452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               92, 57
               

               Conread position:
               92-194
               

               Cow position:
               chr22:35215657-35215759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               84
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-200
               

               Cow position:
               chr22:35627456-35627563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               81, 94
               

               Conread position:
               92-201
               

               Cow position:
               chr22:32698869-32698978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-204
               

               Cow position:
               chr22:1714756-1714645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               92-204
               

               Cow position:
               chr22:27681830-27681942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-205
               

               Cow position:
               chr22:7497002-7496887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               92-205
               

               Cow position:
               chr22:28290449-28290563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               92-205
               

               Cow position:
               chr22:33399383-33399269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               92-207
               

               Cow position:
               chr22:26112473-26112589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               97-197
               

               Cow position:
               chr22:35665761-35665662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               97-207
               

               Cow position:
               chr22:6149277-6149167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               78, 103
               

               Conread position:
               100-201
               

               Cow position:
               chr22:18442631-18442530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               83
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               64-194
               

               Cow position:
               chr23:18739377-18739245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               77-184
               

               Cow position:
               chr23:18710374-18710268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               84-203
               

               Cow position:
               chr23:580499-580380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               12, 115
               

               Conread position:
               91-194
               

               Cow position:
               chr23:25884077-25884180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr23:11081370-11081472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               84
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr23:21539269-21539371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               88
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-211
               

               Cow position:
               chr23:40737903-40737784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-232
               

               Cow position:
               chr23:22207787-22207925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               87, 122
               

               Conread position:
               98-194
               

               Cow position:
               chr23:40443974-40444070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               80
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               100-207
               

               Cow position:
               chr23:24479803-24479696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               100, 91
               

               Conread position:
               101-196
               

               Cow position:
               chr23:40951124-40951219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               80
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               64-192
               

               Cow position:
               chr24:18874761-18874635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               69-211
               

               Cow position:
               chr24:38428046-38427906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               134, 22
               

               Conread position:
               92-186
               

               Cow position:
               chr24:33238169-33238075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               79
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr24:16640998-16641100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               87
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr24:20801260-20801158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr24:23637714-23637615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               92-211
               

               Cow position:
               chr24:20225832-20225951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               104, 60
               

               Conread position:
               67-191
               

               Cow position:
               chr25:33272722-33272844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               69-192
               

               Cow position:
               chr25:14225451-14225574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr25:30462213-30462110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               95, 62
               

               Conread position:
               92-205
               

               Cow position:
               chr25:21547266-21547374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               92-210
               

               Cow position:
               chr25:17119852-17119969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               92-221
               

               Cow position:
               chr25:22154138-22154266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               103, 108
               

               Conread position:
               98-204
               

               Cow position:
               chr25:13380485-13380379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               85
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               62-194
               

               Cow position:
               chr26:28202658-28202525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               119, 25
               

               Conread position:
               92-183
               

               Cow position:
               chr26:15908635-15908544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               79
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-191
               

               Cow position:
               chr26:35677974-35678074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               83
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               92-195
               

               Cow position:
               chr26:21418328-21418222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               92-211
               

               Cow position:
               chr26:12028109-12027988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               97-208
               

               Cow position:
               chr26:3930400-3930290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               105-194
               

               Cow position:
               chr26:18679386-18679476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               81
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               81, 49
               

               Conread position:
               59-208
               

               Cow position:
               chr27:31479153-31479006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               5, 15
               

               Conread position:
               62-184
               

               Cow position:
               chr27:426842-426725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               74-220
               

               Cow position:
               chr27:28922032-28922172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr27:4486933-4487035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-199
               

               Cow position:
               chr27:6752025-6751918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-203
               

               Cow position:
               chr27:29877629-29877740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-206
               

               Cow position:
               chr27:11208710-11208824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-222
               

               Cow position:
               chr27:26467714-26467843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               93-254
               

               Cow position:
               chr27:18646303-18646466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               122, 105
               

               Conread position:
               97-197
               

               Cow position:
               chr27:18543830-18543730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               83
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               97-205
               

               Cow position:
               chr27:10404275-10404384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               97-206
               

               Cow position:
               chr27:28015893-28016002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               97-212
               

               Cow position:
               chr27:21054299-21054186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               98-192
               

               Cow position:
               chr27:12947956-12948050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               79
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               62-183
               

               Cow position:
               chr28:6563808-6563689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               64-192
               

               Cow position:
               chr28:16964878-16964749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               32, 17
               

               Conread position:
               69-189
               

               Cow position:
               chr28:13527291-13527411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               105, 23
               

               Conread position:
               90-199
               

               Cow position:
               chr28:32203238-32203345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               92-182
               

               Cow position:
               chr28:5630213-5630303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               77
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-183
               

               Cow position:
               chr28:6301198-6301289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               79
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-193
               

               Cow position:
               chr28:8716266-8716165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr28:4282375-4282272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr28:4937125-4937021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               93-203
               

               Cow position:
               chr28:8347849-8347960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               88-227
               

               Cow position:
               chr29:9800763-9800902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr29:18450030-18449926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               92-208
               

               Cow position:
               chr29:4648102-4647987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               94, 56
               

               Conread position:
               96-226
               

               Cow position:
               chr29:20903115-20902986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               98-196
               

               Cow position:
               chr29:32211865-32211963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               82
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               99-194
               

               Cow position:
               chr29:24065800-24065895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               80
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               64-183
               

               Cow position:
               chr3:55318837-55318722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               64-189
               

               Cow position:
               chr3:72626686-72626560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               11, 30
               

               Conread position:
               64-195
               

               Cow position:
               chr3:986074-986203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               64-201
               

               Cow position:
               chr3:15443669-15443531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               69-173
               

               Cow position:
               chr3:62370121-62370223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               69-193
               

               Cow position:
               chr3:1011555-1011678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               69-193
               

               Cow position:
               chr3:68303381-68303505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               117, 23
               

               Conread position:
               69-196
               

               Cow position:
               chr3:21694291-21694415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               69-198
               

               Cow position:
               chr3:62789888-62789758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               79-194
               

               Cow position:
               chr3:20802571-20802455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               13, 102
               

               Conread position:
               92-192
               

               Cow position:
               chr3:56754450-56754350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr3:53604659-53604557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-197
               

               Cow position:
               chr3:61680402-61680507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-204
               

               Cow position:
               chr3:42796433-42796321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-204
               

               Cow position:
               chr3:66563870-66563982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-205
               

               Cow position:
               chr3:31555018-31555133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               92-205
               

               Cow position:
               chr3:33460514-33460401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-205
               

               Cow position:
               chr3:41746414-41746304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               92-205
               

               Cow position:
               chr3:42933568-42933684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               92-206
               

               Cow position:
               chr3:635264-635378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               106, 50
               

               Conread position:
               92-207
               

               Cow position:
               chr3:79893411-79893295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               95, 108
               

               Conread position:
               92-208
               

               Cow position:
               chr3:62864163-62864278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               92-271
               

               Cow position:
               chr3:10841900-10842082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               10, 105
               

               Conread position:
               97-195
               

               Cow position:
               chr3:11281859-11281957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               82
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               99-194
               

               Cow position:
               chr3:43389033-43388938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               82
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               100-209
               

               Cow position:
               chr3:49231977-49232085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               100-230
               

               Cow position:
               chr3:5346549-5346420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               119, 95
               

               Conread position:
               107-206
               

               Cow position:
               chr3:18764205-18764305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               114-205
               

               Cow position:
               chr3:56677900-56677809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               78
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               69-191
               

               Cow position:
               chr4:19543023-19543145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               109, 22
               

               Conread position:
               69-194
               

               Cow position:
               chr4:11186047-11186170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               69-197
               

               Cow position:
               chr4:46235081-46234955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               117, 21
               

               Conread position:
               73-189
               

               Cow position:
               chr4:45963971-45964089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               92-185
               

               Cow position:
               chr4:42347588-42347681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               80
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-192
               

               Cow position:
               chr4:33273244-33273144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               82
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-193
               

               Cow position:
               chr4:7043716-7043615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               83
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-193
               

               Cow position:
               chr4:23809701-23809600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr4:23450989-23450885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr4:26959865-26959763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-196
               

               Cow position:
               chr4:25197389-25197284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               92-202
               

               Cow position:
               chr4:44772938-44772825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               92-204
               

               Cow position:
               chr4:47035620-47035508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               88
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-205
               

               Cow position:
               chr4:5790747-5790860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-206
               

               Cow position:
               chr4:9444581-9444468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               92-228
               

               Cow position:
               chr4:45250075-45250208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               97-198
               

               Cow position:
               chr4:6072945-6072844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               97-198
               

               Cow position:
               chr4:7816407-7816508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-235
               

               Cow position:
               chr4:7964540-7964405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               89, 110
               

               Conread position:
               99-192
               

               Cow position:
               chr4:30935251-30935158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               79
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               20-203
               

               Cow position:
               chr5:52032246-52032062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 70
               

               Conread position:
               64-180
               

               Cow position:
               chr5:57755925-57755810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               68-194
               

               Cow position:
               chr5:74690138-74690015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               69-204
               

               Cow position:
               chr5:45854614-45854751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               69-219
               

               Cow position:
               chr5:14550467-14550318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               105, 22
               

               Conread position:
               74-185
               

               Cow position:
               chr5:56059947-56059835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               89
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               74-204
               

               Cow position:
               chr5:66582085-66582218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               88-194
               

               Cow position:
               chr5:49474422-49474316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               85
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               88-202
               

               Cow position:
               chr5:4120159-4120274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               92-184
               

               Cow position:
               chr5:64060582-64060674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               79
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-185
               

               Cow position:
               chr5:56428436-56428342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               81
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr5:12902055-12902157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr5:17026331-17026434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr5:54712932-54712830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr5:55783825-55783723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr5:55949542-55949440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr5:57447528-57447426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-196
               

               Cow position:
               chr5:61593400-61593505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               92-202
               

               Cow position:
               chr5:41935519-41935409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-205
               

               Cow position:
               chr5:43490255-43490141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 95
               

               Conread position:
               92-217
               

               Cow position:
               chr5:57399115-57398991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               93-195
               

               Cow position:
               chr5:7057260-7057155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               94-204
               

               Cow position:
               chr5:17828339-17828230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               100-194
               

               Cow position:
               chr5:67600830-67600926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               82
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               100-226
               

               Cow position:
               chr5:67634364-67634239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               96
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               101-205
               

               Cow position:
               chr5:29831372-29831269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               85
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               101-208
               

               Cow position:
               chr5:35725516-35725410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               64-206
               

               Cow position:
               chr6:16700375-16700518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               32, 17
               

               Conread position:
               69-194
               

               Cow position:
               chr6:17313864-17313989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               74-211
               

               Cow position:
               chr6:8187054-8186920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               88-205
               

               Cow position:
               chr6:54846131-54846014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-170
               

               Cow position:
               chr6:14471514-14471592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               79
               

               Alignm identity:
               71
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-183
               

               Cow position:
               chr6:23381517-23381426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               80
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-189
               

               Cow position:
               chr6:19563330-19563233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               83
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr6:16738764-16738867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               92-203
               

               Cow position:
               chr6:36267149-36267258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               92-205
               

               Cow position:
               chr6:3952670-3952783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-237
               

               Cow position:
               chr6:44543998-44543853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               89, 128
               

               Conread position:
               93-206
               

               Cow position:
               chr6:28559690-28559802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               93-212
               

               Cow position:
               chr6:50504605-50504727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               94-194
               

               Cow position:
               chr6:12711641-12711541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-204
               

               Cow position:
               chr6:31231137-31231028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               97-194
               

               Cow position:
               chr6:28562014-28561916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               100-228
               

               Cow position:
               chr6:26764665-26764537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               116, 79
               

               Conread position:
               64-205
               

               Cow position:
               chr7:10945473-10945613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               69-185
               

               Cow position:
               chr7:32823924-32823810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               69-190
               

               Cow position:
               chr7:7616907-7617027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               71-199
               

               Cow position:
               chr7:23609513-23609639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               74-220
               

               Cow position:
               chr7:54108734-54108584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               111, 18
               

               Conread position:
               77-193
               

               Cow position:
               chr7:63101541-63101658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 104
               

               Conread position:
               91-194
               

               Cow position:
               chr7:35088810-35088913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-183
               

               Cow position:
               chr7:11151318-11151227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               78
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-183
               

               Cow position:
               chr7:17000880-17000971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               78
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-186
               

               Cow position:
               chr7:30290792-30290699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               80
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               92-189
               

               Cow position:
               chr7:43109386-43109288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               82
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               92-192
               

               Cow position:
               chr7:52591849-52591749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-193
               

               Cow position:
               chr7:8376521-8376622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr7:9816151-9816253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               83
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr7:12484453-12484553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               92-195
               

               Cow position:
               chr7:53579237-53579136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               92-199
               

               Cow position:
               chr7:53834437-53834330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-203
               

               Cow position:
               chr7:40412743-40412851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               92-204
               

               Cow position:
               chr7:8289508-8289619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               92-205
               

               Cow position:
               chr7:8523630-8523517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-205
               

               Cow position:
               chr7:38361084-38360971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-220
               

               Cow position:
               chr7:14496469-14496342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               92-233
               

               Cow position:
               chr7:25263522-25263659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               135, 38
               

               Conread position:
               94-199
               

               Cow position:
               chr7:41346876-41346770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               86
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               95-182
               

               Cow position:
               chr7:18958386-18958299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               102-208
               

               Cow position:
               chr7:8088695-8088588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               64-206
               

               Cow position:
               chr8:40743125-40742984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               21, 99
               

               Conread position:
               66-219
               

               Cow position:
               chr8:6475448-6475295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               30, 11
               

               Conread position:
               68-203
               

               Cow position:
               chr8:35827703-35827571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               69-196
               

               Cow position:
               chr8:26305765-26305637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               115, 23
               

               Conread position:
               69-207
               

               Cow position:
               chr8:47225897-47225761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               91-197
               

               Cow position:
               chr8:37291967-37291860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               91-226
               

               Cow position:
               chr8:38331186-38331322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               96, 128
               

               Conread position:
               92-185
               

               Cow position:
               chr8:28046909-28047002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               82
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               74, 84
               

               Conread position:
               92-192
               

               Cow position:
               chr8:5385562-5385462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-192
               

               Cow position:
               chr8:43052093-43052194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr8:25786141-25786038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr8:27731160-27731262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               83
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-195
               

               Cow position:
               chr8:24237207-24237314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               92-197
               

               Cow position:
               chr8:10194187-10194293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               92-199
               

               Cow position:
               chr8:19474960-19474853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-199
               

               Cow position:
               chr8:32260213-32260320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-204
               

               Cow position:
               chr8:9942403-9942292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               89
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               92-204
               

               Cow position:
               chr8:20105751-20105640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               92-204
               

               Cow position:
               chr8:52870301-52870414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               92-209
               

               Cow position:
               chr8:6910039-6909922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               102, 38
               

               Conread position:
               92-210
               

               Cow position:
               chr8:49305628-49305509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               82, 106
               

               Conread position:
               92-217
               

               Cow position:
               chr8:4871404-4871529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               95-203
               

               Cow position:
               chr8:9465243-9465351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               86
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               99-208
               

               Cow position:
               chr8:36771106-36771214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               100-196
               

               Cow position:
               chr8:4193411-4193315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               84
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               11, 87
               

               Conread position:
               100-205
               

               Cow position:
               chr8:16413682-16413580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               88
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               104-205
               

               Cow position:
               chr8:11733864-11733964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               64-183
               

               Cow position:
               chr9:26477161-26477041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               69-177
               

               Cow position:
               chr9:9723938-9724044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               69-194
               

               Cow position:
               chr9:52511057-52510933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               69-205
               

               Cow position:
               chr9:8573329-8573191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               41, 87
               

               Conread position:
               74-194
               

               Cow position:
               chr9:28315362-28315243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               74-211
               

               Cow position:
               chr9:61019429-61019564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               77-204
               

               Cow position:
               chr9:48809085-48808954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               13, 53
               

               Conread position:
               92-192
               

               Cow position:
               chr9:39709773-39709673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               83
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-193
               

               Cow position:
               chr9:36693376-36693477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               83
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-194
               

               Cow position:
               chr9:6397866-6397968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               83
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-196
               

               Cow position:
               chr9:19657057-19657158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               92-199
               

               Cow position:
               chr9:53061573-53061467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               92-207
               

               Cow position:
               chr9:38792935-38792818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               96-187
               

               Cow position:
               chr9:31344694-31344785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               78
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-203
               

               Cow position:
               chr9:35861495-35861386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               98-194
               

               Cow position:
               chr9:35845105-35845201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               81
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-213
               

               Cow position:
               chr9:47517111-47516997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               99-205
               

               Cow position:
               chr9:48046448-48046341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               103-194
               

               Cow position:
               chr9:49984516-49984607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               78
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               64-187
               

               Cow position:
               chrX:40680725-40680848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               9, 22
               

               Conread position:
               66-183
               

               Cow position:
               chrX:8759737-8759852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               69-194
               

               Cow position:
               chrX:42220584-42220461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               69-235
               

               Cow position:
               chrX:42506831-42506668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               141, 115
               

               Conread position:
               78-222
               

               Cow position:
               chrX:35409878-35410015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               91-225
               

               Cow position:
               chrX:26850288-26850155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               92-192
               

               Cow position:
               chrX:876708-876609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               83
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               92-192
               

               Cow position:
               chrX:19161992-19161892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-193
               

               Cow position:
               chrX:42159080-42159180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               92-203
               

               Cow position:
               chrX:7950572-7950462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               92-203
               

               Cow position:
               chrX:23185199-23185089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               92-205
               

               Cow position:
               chrX:1938151-1938265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               92-205
               

               Cow position:
               chrX:33466762-33466872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               33, 59
               

               Conread position:
               92-205
               

               Cow position:
               chrX:40337049-40337164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               92-209
               

               Cow position:
               chrX:3130781-3130899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               92-209
               

               Cow position:
               chrX:4328045-4327926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               92-212
               

               Cow position:
               chrX:51764-51645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               93-194
               

               Cow position:
               chrX:4399255-4399358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               94-192
               

               Cow position:
               chrX:34193940-34193842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               95-202
               

               Cow position:
               chrX:44040318-44040427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               97-208
               

               Cow position:
               chrX:22134878-22134767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-194
               

               Cow position:
               chrX:4632710-4632613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               98-199
               

               Cow position:
               chrX:19203201-19203099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               98-203
               

               Cow position:
               chrX:11674256-11674362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               98-205
               

               Cow position:
               chrX:8642189-8642295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               98-215
               

               Cow position:
               chrX:41941768-41941884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               98-252
               

               Cow position:
               chrX:755087-755241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               125, 135
               

               Conread position:
               99-192
               

               Cow position:
               chrX:27508879-27508786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               80
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               99-200
               

               Cow position:
               chrX:27442393-27442292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               99-206
               

               Cow position:
               chrX:29723896-29724001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               100-205
               

               Cow position:
               chrX:40451922-40451816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               86
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               100-218
               

               Cow position:
               chrX:22283985-22284104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               114, 0
Conread position:	50-231
Cow position:	chr1:81364339-81364518 (view UCSC Genome Browser custom track)
Alignm length:	183
Alignm identity:	128
Alignm E-value:	4e-22
Alignm gaps (pig, cow):	154, 12
Conread position:	69-185
Cow position:	chr1:36237874-36237988 (view UCSC Genome Browser custom track)
Alignm length:	117
Alignm identity:	93
Alignm E-value:	4e-22
Alignm gaps (pig, cow):	19, 0
Conread position:	73-198
Cow position:	chr1:50854009-50854133 (view UCSC Genome Browser custom track)
Alignm length:	126
Alignm identity:	97
Alignm E-value:	4e-22
Alignm gaps (pig, cow):	112, 0
Conread position:	91-213
Cow position:	chr1:95152988-95153110 (view UCSC Genome Browser custom track)
Alignm length:	124
Alignm identity:	97
Alignm E-value:	4e-22
Alignm gaps (pig, cow):	90, 106
Conread position:	92-186
Cow position:	chr1:10610557-10610463 (view UCSC Genome Browser custom track)
Alignm length:	95
Alignm identity:	84
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	0, 0
Conread position:	92-192
Cow position:	chr1:49297766-49297866 (view UCSC Genome Browser custom track)
Alignm length:	101
Alignm identity:	87
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	0, 0
Conread position:	92-193
Cow position:	chr1:71350609-71350508 (view UCSC Genome Browser custom track)
Alignm length:	102
Alignm identity:	84
Alignm E-value:	4e-22
Alignm gaps (pig, cow):	0, 0
Conread position:	92-194
Cow position:	chr1:54258684-54258787 (view UCSC Genome Browser custom track)
Alignm length:	104
Alignm identity:	85
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	83, 0
Conread position:	92-196
Cow position:	chr1:64803982-64803878 (view UCSC Genome Browser custom track)
Alignm length:	105
Alignm identity:	89
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	0, 0
Conread position:	92-204
Cow position:	chr1:1915911-1915800 (view UCSC Genome Browser custom track)
Alignm length:	113
Alignm identity:	91
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	55, 0
Conread position:	92-205
Cow position:	chr1:91912447-91912563 (view UCSC Genome Browser custom track)
Alignm length:	117
Alignm identity:	94
Alignm E-value:	4e-22
Alignm gaps (pig, cow):	13, 0
Conread position:	92-208
Cow position:	chr1:36306793-36306907 (view UCSC Genome Browser custom track)
Alignm length:	117
Alignm identity:	92
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	106, 0
Conread position:	97-193
Cow position:	chr1:90267844-90267940 (view UCSC Genome Browser custom track)
Alignm length:	97
Alignm identity:	81
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	0, 0
Conread position:	98-194
Cow position:	chr1:7597620-7597716 (view UCSC Genome Browser custom track)
Alignm length:	97
Alignm identity:	81
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	0, 0
Conread position:	98-205
Cow position:	chr1:95513961-95514069 (view UCSC Genome Browser custom track)
Alignm length:	109
Alignm identity:	88
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	89, 0
Conread position:	99-212
Cow position:	chr1:35600168-35600055 (view UCSC Genome Browser custom track)
Alignm length:	114
Alignm identity:	91
Alignm E-value:	5e-23
Alignm gaps (pig, cow):	0, 0
Conread position:	198-441
Cow position:	chr1:58810246-58810489 (view UCSC Genome Browser custom track)
Alignm length:	247
Alignm identity:	204
Alignm E-value:	0
Alignm gaps (pig, cow):	157, 18
Conread position:	64-184
Cow position:	chr10:9959276-9959396 (view UCSC Genome Browser custom track)
Alignm length:	123
Alignm identity:	97
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	11, 24
Conread position:	65-197
Cow position:	chr10:35638082-35637952 (view UCSC Genome Browser custom track)
Alignm length:	133
Alignm identity:	101
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	22, 0
Conread position:	69-205
Cow position:	chr10:15602114-15601980 (view UCSC Genome Browser custom track)
Alignm length:	138
Alignm identity:	104
Alignm E-value:	8e-21
Alignm gaps (pig, cow):	124, 18