Cow genome map
| Conread name: | Lym2-sn77_B05.f1 |
| Conread position: | 397-595 |
| Cow position: | chr1:52322349-52322150 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 181, 162 |
| Conread position: | 403-595 |
| Cow position: | chr1:51650961-51650769 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 65, 58 |
| Conread position: | 397-534 |
| Cow position: | chr10:42735354-42735219 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 414-595 |
| Cow position: | chr10:60488434-60488252 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 152, 159 |
| Conread position: | 397-567 |
| Cow position: | chr11:8282281-8282115 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 402-557 |
| Cow position: | chr11:13057657-13057810 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 402-560 |
| Cow position: | chr11:77778688-77778844 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 402-571 |
| Cow position: | chr11:24676550-24676380 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 50, 61 |
| Conread position: | 398-538 |
| Cow position: | chr12:22120508-22120369 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 402-545 |
| Cow position: | chr12:21896863-21896721 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 30, 55 |
| Conread position: | 402-575 |
| Cow position: | chr12:15956684-15956859 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 398-564 |
| Cow position: | chr13:5281874-5281708 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 398-564 |
| Cow position: | chr16:28876386-28876221 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 101, 21 |
| Conread position: | 398-571 |
| Cow position: | chr16:32933964-32933790 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 61, 69 |
| Conread position: | 402-559 |
| Cow position: | chr16:29030722-29030565 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 420-564 |
| Cow position: | chr16:15368316-15368172 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 400-580 |
| Cow position: | chr17:3695144-3695331 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 35, 121 |
| Conread position: | 399-592 |
| Cow position: | chr2:28622286-28622479 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 184, 163 |
| Conread position: | 402-574 |
| Cow position: | chr2:7900366-7900193 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 409-564 |
| Cow position: | chr2:14559496-14559341 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 398-564 |
| Cow position: | chr20:18316767-18316931 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 398-573 |
| Cow position: | chr20:20250463-20250638 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 149, 94 |
| Conread position: | 399-564 |
| Cow position: | chr20:28592101-28591937 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 402-573 |
| Cow position: | chr21:23808623-23808452 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 66, 58 |
| Conread position: | 397-585 |
| Cow position: | chr22:32481662-32481851 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 63, 182 |
| Conread position: | 402-539 |
| Cow position: | chr22:9464252-9464117 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 402-575 |
| Cow position: | chr22:3308178-3308352 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 398-571 |
| Cow position: | chr23:29474836-29475010 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 399-575 |
| Cow position: | chr23:10557524-10557701 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 148, 154 |
| Conread position: | 400-590 |
| Cow position: | chr23:22881395-22881585 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 162, 148 |
| Conread position: | 398-545 |
| Cow position: | chr24:36561372-36561518 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 398-590 |
| Cow position: | chr24:16650451-16650645 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 62, 68 |
| Conread position: | 409-575 |
| Cow position: | chr25:18091421-18091256 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 157, 114 |
| Conread position: | 409-573 |
| Cow position: | chr27:26557208-26557376 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 392-573 |
| Cow position: | chr28:10292948-10292767 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 11, 42 |
| Conread position: | 398-571 |
| Cow position: | chr28:21928227-21928052 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 409-543 |
| Cow position: | chr28:5811490-5811359 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 397-584 |
| Cow position: | chr29:8660038-8659852 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 169, 59 |
| Conread position: | 398-564 |
| Cow position: | chr3:15055693-15055858 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 398-584 |
| Cow position: | chr3:39325451-39325265 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 70, 60 |
| Conread position: | 398-585 |
| Cow position: | chr3:63006459-63006645 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 70, 62 |
| Conread position: | 402-564 |
| Cow position: | chr3:3908271-3908433 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 49, 54 |
| Conread position: | 402-575 |
| Cow position: | chr3:61276081-61275911 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 164, 40 |
| Conread position: | 398-564 |
| Cow position: | chr4:27301803-27301970 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 32, 129 |
| Conread position: | 402-573 |
| Cow position: | chr4:21343950-21344122 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 398-588 |
| Cow position: | chr6:12094148-12094340 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 398-595 |
| Cow position: | chr6:11167945-11167749 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 164, 142 |
| Conread position: | 427-585 |
| Cow position: | chr6:47957858-47957699 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 32 |
| Conread position: | 397-571 |
| Cow position: | chr7:20431751-20431926 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 398-564 |
| Cow position: | chr7:24935356-24935521 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 36, 27 |
| Conread position: | 398-564 |
| Cow position: | chr7:30157501-30157666 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 70, 62 |
| Conread position: | 419-564 |
| Cow position: | chr7:42426772-42426627 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 398-567 |
| Cow position: | chr8:21204756-21204586 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 399-590 |
| Cow position: | chr8:24421713-24421910 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 63 |
| Conread position: | 402-564 |
| Cow position: | chr8:38608960-38609123 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 402-592 |
| Cow position: | chr8:11756709-11756516 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 164, 135 |
| Conread position: | 402-564 |
| Cow position: | chrX:17672279-17672438 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 30, 117 |