Cow genome map
| Conread name: | Mixc-0025l20 |
| Conread position: | 1-92 |
| Cow position: | chr1:72356575-72356484 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 78 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:26069847-26070021 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 123, 113 |
| Conread position: | 2-134 |
| Cow position: | chr1:808570-808702 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 70, 124 |
| Conread position: | 3-107 |
| Cow position: | chr1:78690441-78690337 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-108 |
| Cow position: | chr1:88971505-88971401 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 92 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 5-145 |
| Cow position: | chr1:83463815-83463675 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 40, 110 |
| Conread position: | 14-170 |
| Cow position: | chr1:44986753-44986591 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-173 |
| Cow position: | chr10:6530394-6530221 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 126 |
| Conread position: | 3-172 |
| Cow position: | chr10:41760109-41760285 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 66, 24 |
| Conread position: | 1-102 |
| Cow position: | chr11:51743307-51743205 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-171 |
| Cow position: | chr11:70745313-70745487 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 88, 128 |
| Conread position: | 3-173 |
| Cow position: | chr11:26845386-26845552 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 4-106 |
| Cow position: | chr11:44234557-44234455 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-100 |
| Cow position: | chr11:65937962-65938057 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 80 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-110 |
| Cow position: | chr11:40572874-40572976 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-110 |
| Cow position: | chr11:30673994-30673895 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 11-173 |
| Cow position: | chr11:377445-377600 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-173 |
| Cow position: | chr12:5543605-5543775 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 110, 115 |
| Conread position: | 1-146 |
| Cow position: | chr13:27170688-27170545 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 1-173 |
| Cow position: | chr13:6087129-6086967 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 1-173 |
| Cow position: | chr13:8609785-8609621 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-173 |
| Cow position: | chr13:20684366-20684202 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 2-197 |
| Cow position: | chr13:50768182-50768369 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 3-106 |
| Cow position: | chr13:9982299-9982195 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 3-171 |
| Cow position: | chr13:20679101-20679263 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 2-173 |
| Cow position: | chr14:29238971-29239137 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 2-169 |
| Cow position: | chr15:10335622-10335783 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 123, 107 |
| Conread position: | 2-173 |
| Cow position: | chr15:28788078-28788246 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 3-110 |
| Cow position: | chr15:28514550-28514442 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 3-173 |
| Cow position: | chr15:41000210-41000040 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 31, 111 |
| Conread position: | 15-98 |
| Cow position: | chr15:5657719-5657802 (view UCSC Genome Browser custom track) |
| Alignm length: | 84 |
| Alignm identity: | 74 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-148 |
| Cow position: | chr15:48590378-48590246 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 122, 109 |
| Conread position: | 45-173 |
| Cow position: | chr15:40594602-40594475 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-141 |
| Cow position: | chr16:29145053-29145194 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 3-96 |
| Cow position: | chr16:44239626-44239533 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 80 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-106 |
| Cow position: | chr16:6823916-6823815 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 8-97 |
| Cow position: | chr16:51258069-51258158 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 77 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-110 |
| Cow position: | chr17:12319458-12319350 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 86 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-173 |
| Cow position: | chr17:29157695-29157516 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 8-173 |
| Cow position: | chr17:4472278-4472435 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 135, 102 |
| Conread position: | 8-164 |
| Cow position: | chr18:7214720-7214570 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-84 |
| Cow position: | chr19:14169251-14169334 (view UCSC Genome Browser custom track) |
| Alignm length: | 84 |
| Alignm identity: | 74 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-175 |
| Cow position: | chr19:22218340-22218515 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 2-173 |
| Cow position: | chr19:52735320-52735156 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 3-106 |
| Cow position: | chr19:53405629-53405732 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-109 |
| Cow position: | chr19:43430479-43430374 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-166 |
| Cow position: | chr19:38392995-38392834 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 119, 110 |
| Conread position: | 1-101 |
| Cow position: | chr2:7523915-7524011 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1-170 |
| Cow position: | chr2:52409063-52409234 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 3-110 |
| Cow position: | chr2:69793628-69793735 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-166 |
| Cow position: | chr2:22253952-22254110 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 3-173 |
| Cow position: | chr2:30911546-30911381 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 6-110 |
| Cow position: | chr2:59817844-59817948 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-119 |
| Cow position: | chr2:53705579-53705467 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 8-173 |
| Cow position: | chr2:11658958-11659117 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 135, 102 |
| Conread position: | 1-105 |
| Cow position: | chr20:1009187-1009290 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 2-106 |
| Cow position: | chr20:31798921-31799025 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-173 |
| Cow position: | chr20:15589308-15589145 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 3-170 |
| Cow position: | chr20:20242351-20242189 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 54, 66 |
| Conread position: | 7-144 |
| Cow position: | chr20:1106521-1106656 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 73, 119 |
| Conread position: | 1-98 |
| Cow position: | chr21:29015926-29016023 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 81 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-102 |
| Cow position: | chr21:396471-396371 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 82 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-173 |
| Cow position: | chr21:29014276-29014436 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 12-173 |
| Cow position: | chr21:48478619-48478775 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-102 |
| Cow position: | chr22:8504551-8504451 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 1-113 |
| Cow position: | chr22:6100240-6100351 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 2-94 |
| Cow position: | chr22:8480306-8480215 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 79 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 3-104 |
| Cow position: | chr22:10030882-10030983 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-154 |
| Cow position: | chr22:23077281-23077425 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 3-173 |
| Cow position: | chr22:23440079-23440240 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 4-102 |
| Cow position: | chr22:27643948-27643850 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-173 |
| Cow position: | chr22:10324102-10323936 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 7-101 |
| Cow position: | chr22:43743130-43743224 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-98 |
| Cow position: | chr23:85292-85195 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 81 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-100 |
| Cow position: | chr23:18106738-18106836 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 82 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-108 |
| Cow position: | chr23:39781716-39781614 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 3-178 |
| Cow position: | chr23:22105786-22105618 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 21, 108 |
| Conread position: | 4-106 |
| Cow position: | chr23:18907106-18907208 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 25 |
| Conread position: | 8-110 |
| Cow position: | chr23:18604923-18605026 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 8-173 |
| Cow position: | chr23:16075938-16076102 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 26 |
| Conread position: | 39-173 |
| Cow position: | chr23:11473313-11473442 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 1-97 |
| Cow position: | chr24:34772125-34772221 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 80 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-173 |
| Cow position: | chr24:39345167-39345340 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 118 |
| Conread position: | 4-173 |
| Cow position: | chr24:38114646-38114818 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 5-173 |
| Cow position: | chr24:33153976-33153811 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 10, 108 |
| Conread position: | 1-103 |
| Cow position: | chr25:26059903-26059801 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-105 |
| Cow position: | chr25:13822644-13822540 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-136 |
| Cow position: | chr25:40931514-40931384 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 83, 121 |
| Conread position: | 2-173 |
| Cow position: | chr26:677744-677904 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 2-173 |
| Cow position: | chr26:33242127-33241965 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 3-107 |
| Cow position: | chr26:32362289-32362187 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 3-169 |
| Cow position: | chr26:13020902-13021065 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 1-108 |
| Cow position: | chr27:18767327-18767220 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-173 |
| Cow position: | chr27:26321428-26321600 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 106, 125 |
| Conread position: | 2-99 |
| Cow position: | chr27:28496614-28496518 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 3-110 |
| Cow position: | chr27:19924548-19924656 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 3-166 |
| Cow position: | chr27:20275308-20275470 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 3-94 |
| Cow position: | chr28:4159168-4159077 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 78 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-137 |
| Cow position: | chr29:26735570-26735435 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 3-173 |
| Cow position: | chr29:6033915-6034084 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 111, 120 |
| Conread position: | 11-110 |
| Cow position: | chr29:16989932-16989833 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-108 |
| Cow position: | chr3:57760698-57760591 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-123 |
| Cow position: | chr3:43863538-43863658 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 2-144 |
| Cow position: | chr3:53192099-53192243 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 102, 114 |
| Conread position: | 3-110 |
| Cow position: | chr3:47725956-47726061 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 3-140 |
| Cow position: | chr3:31048302-31048438 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 8-173 |
| Cow position: | chr3:7428205-7428033 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 8-173 |
| Cow position: | chr3:74243199-74243028 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 104, 130 |
| Conread position: | 1-153 |
| Cow position: | chr4:45393773-45393621 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 68, 118 |
| Conread position: | 3-106 |
| Cow position: | chr4:67408671-67408568 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-178 |
| Cow position: | chr4:10851230-10851403 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 61, 113 |
| Conread position: | 5-173 |
| Cow position: | chr4:58305686-58305854 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 109, 52 |
| Conread position: | 11-121 |
| Cow position: | chr4:33140470-33140359 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 2-171 |
| Cow position: | chr5:63987190-63987359 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 112, 122 |
| Conread position: | 3-110 |
| Cow position: | chr5:43929333-43929439 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 3-168 |
| Cow position: | chr5:73536836-73536678 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 4-193 |
| Cow position: | chr5:29831292-29831478 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 171, 82 |
| Conread position: | 15-173 |
| Cow position: | chr5:23168587-23168741 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 42, 50 |
| Conread position: | 39-128 |
| Cow position: | chr5:27015813-27015723 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 80 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-166 |
| Cow position: | chr6:34034691-34034534 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 2-173 |
| Cow position: | chr6:32809556-32809380 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 3-110 |
| Cow position: | chr6:32210470-32210577 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-178 |
| Cow position: | chr6:21869389-21869554 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 1-141 |
| Cow position: | chr7:38519798-38519946 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 8-127 |
| Cow position: | chr7:61552175-61552052 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 102, 110 |
| Conread position: | 1-173 |
| Cow position: | chr8:52229452-52229621 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-178 |
| Cow position: | chr8:39173993-39174177 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 3-104 |
| Cow position: | chr8:38645089-38645189 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 3-122 |
| Cow position: | chr8:30728552-30728672 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 3-173 |
| Cow position: | chr8:19997783-19997955 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 3-173 |
| Cow position: | chr8:34478341-34478165 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1-155 |
| Cow position: | chr9:8552424-8552581 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 68, 52 |
| Conread position: | 1-173 |
| Cow position: | chr9:1323854-1323689 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 3-94 |
| Cow position: | chr9:23956147-23956056 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 78 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-95 |
| Cow position: | chr9:63960352-63960260 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 80 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-138 |
| Cow position: | chr9:42986483-42986351 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 4-173 |
| Cow position: | chr9:36826718-36826876 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 8-108 |
| Cow position: | chr9:25432088-25431988 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 181-469 |
| Cow position: | chr9:23284560-23284856 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 2-170 |
| Cow position: | chrX:40557429-40557590 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 3-173 |
| Cow position: | chrX:878122-878294 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 65, 117 |
| Conread position: | 4-171 |
| Cow position: | chrX:9416430-9416596 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 110, 124 |