Cow genome map

Conread name: Mixc-0029c19

Conread position: 6-117
Cow position: chr1:49433303-49433189 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 7-120
Cow position: chr1:93554801-93554914 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-119
Cow position: chr1:21787303-21787413 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 11-119
Cow position: chr1:44506943-44507050 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 12-117
Cow position: chr1:77683323-77683427 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 12-119
Cow position: chr1:5023792-5023685 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr1:6788313-6788206 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr1:7971381-7971489 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 12-119
Cow position: chr1:37309552-37309442 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 94
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 12-119
Cow position: chr1:45223551-45223658 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr1:45555336-45555443 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr1:78068099-78067992 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr1:98511894-98512004 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 12-124
Cow position: chr1:34771532-34771421 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 13-117
Cow position: chr1:4032603-4032707 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-117
Cow position: chr1:96273051-96272948 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 13-119
Cow position: chr1:10778533-10778640 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 13-119
Cow position: chr1:88359849-88359955 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-119
Cow position: chr1:95974372-95974477 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 14-119
Cow position: chr1:11729148-11729252 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 14-119
Cow position: chr1:99071102-99071209 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 15-117
Cow position: chr1:54478302-54478404 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 15-119
Cow position: chr1:82880620-82880721 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 15-120
Cow position: chr1:53308416-53308314 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 16-119
Cow position: chr1:72068860-72068758 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 17-119
Cow position: chr1:61542943-61542842 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 18-118
Cow position: chr1:101946738-101946638 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 19-119
Cow position: chr1:48769779-48769879 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 19-119
Cow position: chr1:54157271-54157373 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 19-121
Cow position: chr1:49980687-49980788 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 20-117
Cow position: chr1:38706876-38706779 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-117
Cow position: chr1:54156756-54156660 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 20-117
Cow position: chr1:65318553-65318650 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-117
Cow position: chr1:67529033-67529130 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 20-117
Cow position: chr1:95215212-95215115 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-117
Cow position: chr1:98576026-98576122 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 20-118
Cow position: chr1:75382959-75383053 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 20-118
Cow position: chr1:85550100-85550002 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr1:30504479-30504578 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr1:39068978-39068879 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr1:45288893-45288794 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr1:63530536-63530635 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr1:71916141-71916043 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 91
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 20-119
Cow position: chr1:75141975-75142074 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr1:90868463-90868364 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-120
Cow position: chr1:55428979-55428878 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 20-125
Cow position: chr1:4374359-4374254 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 21-117
Cow position: chr1:8287651-8287555 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 21-118
Cow position: chr1:56225764-56225861 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 21-119
Cow position: chr1:8670752-8670850 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 21-119
Cow position: chr1:42541577-42541675 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 21-119
Cow position: chr1:45670614-45670709 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 21-119
Cow position: chr1:101632358-101632260 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 21-120
Cow position: chr1:43312052-43311953 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 22-115
Cow position: chr1:96081460-96081553 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 22-117
Cow position: chr1:19515639-19515544 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 22-119
Cow position: chr1:20667762-20667665 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 22-119
Cow position: chr1:69264790-69264885 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 22-119
Cow position: chr1:77739702-77739799 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 24-119
Cow position: chr1:74081999-74081904 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 26-119
Cow position: chr1:242541-242634 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 82
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 26-119
Cow position: chr1:100474218-100474311 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 115-257
Cow position: chr1:69722010-69722154 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 131, 0

Conread position: 118-279
Cow position: chr1:98413611-98413448 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 152

Conread position: 120-255
Cow position: chr1:228662-228800 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 124-257
Cow position: chr1:95062617-95062749 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 5-114
Cow position: chr10:55122739-55122849 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 8-126
Cow position: chr10:48282615-48282497 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 10-119
Cow position: chr10:28429565-28429456 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 11-119
Cow position: chr10:23576485-23576593 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 5, 99

Conread position: 11-120
Cow position: chr10:6663976-6664082 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 12-117
Cow position: chr10:15868192-15868297 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 12-117
Cow position: chr10:19372396-19372291 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 12-117
Cow position: chr10:54477042-54477147 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 94

Conread position: 12-119
Cow position: chr10:20132590-20132481 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 12-119
Cow position: chr10:23128047-23127939 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 12-119
Cow position: chr10:24903045-24902937 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 12-119
Cow position: chr10:28152438-28152331 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr10:31779328-31779221 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr10:64285854-64285747 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-117
Cow position: chr10:47724888-47724992 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-118
Cow position: chr10:55396035-55395930 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 13-120
Cow position: chr10:13315881-13315987 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 14-119
Cow position: chr10:32080217-32080319 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 14-119
Cow position: chr10:47690330-47690435 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 93
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 14-119
Cow position: chr10:59839342-59839240 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 14-119
Cow position: chr10:62286499-62286604 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 15-117
Cow position: chr10:47182625-47182523 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 16-114
Cow position: chr10:31798455-31798357 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 16-119
Cow position: chr10:17553128-17553230 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 18-118
Cow position: chr10:13586649-13586750 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 19-119
Cow position: chr10:37014581-37014681 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-117
Cow position: chr10:26209298-26209202 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 20-117
Cow position: chr10:34430277-34430180 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr10:705047-704948 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr10:4184144-4184243 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr10:18042128-18042227 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr10:35862279-35862180 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr10:68829336-68829237 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 21-116
Cow position: chr10:34700580-34700675 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 21-117
Cow position: chr10:29349561-29349659 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 22-119
Cow position: chr10:29588889-29588792 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 23-119
Cow position: chr10:54848733-54848825 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 117-257
Cow position: chr10:48354706-48354845 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 135, 0

Conread position: 120-254
Cow position: chr10:36036370-36036238 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 120-361
Cow position: chr10:15536724-15536492 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 91, 15

Conread position: 4-117
Cow position: chr11:56654494-56654607 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 8-117
Cow position: chr11:34106727-34106618 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 11-117
Cow position: chr11:77128607-77128712 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 12-114
Cow position: chr11:6633658-6633759 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 12-114
Cow position: chr11:62230127-62230229 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr11:34113212-34113319 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 19

Conread position: 12-119
Cow position: chr11:70978789-70978680 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 12-119
Cow position: chr11:73354112-73354006 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 12-120
Cow position: chr11:63920108-63919999 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 12-120
Cow position: chr11:67312726-67312835 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 13-119
Cow position: chr11:377694-377588 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-119
Cow position: chr11:19946383-19946489 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-119
Cow position: chr11:30925104-30925210 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 13-126
Cow position: chr11:4653026-4652912 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 14-116
Cow position: chr11:47837267-47837370 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 8, 47

Conread position: 14-117
Cow position: chr11:63435470-63435572 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 14-117
Cow position: chr11:76114594-76114698 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 14-119
Cow position: chr11:16907100-16906997 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 69

Conread position: 14-119
Cow position: chr11:23138105-23138001 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 14-119
Cow position: chr11:29946965-29946860 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 14-119
Cow position: chr11:47004297-47004402 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 14-119
Cow position: chr11:54334276-54334382 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 15-119
Cow position: chr11:42359065-42359168 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 15-120
Cow position: chr11:35536537-35536641 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 15-120
Cow position: chr11:84890767-84890663 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 16-119
Cow position: chr11:52983626-52983729 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 92
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 17-117
Cow position: chr11:13499969-13500067 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 18-118
Cow position: chr11:17321600-17321699 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 18-118
Cow position: chr11:67804702-67804802 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 19-119
Cow position: chr11:33348232-33348133 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 19-119
Cow position: chr11:63434104-63434004 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 19-120
Cow position: chr11:53778570-53778671 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr11:35669997-35669898 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr11:38874447-38874348 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr11:51729241-51729340 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-120
Cow position: chr11:45898099-45897995 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 20-120
Cow position: chr11:49152905-49153003 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 20-120
Cow position: chr11:58588301-58588399 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 20-120
Cow position: chr11:71501177-71501077 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-121
Cow position: chr11:48474658-48474759 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 20-138
Cow position: chr11:22977919-22977801 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 22-119
Cow position: chr11:11125620-11125717 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 22-119
Cow position: chr11:84977402-84977305 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 24-117
Cow position: chr11:64868062-64867969 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 24-119
Cow position: chr11:9270766-9270672 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 24-120
Cow position: chr11:63909705-63909612 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 25-120
Cow position: chr11:23586598-23586693 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 28-115
Cow position: chr11:53717844-53717757 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 76
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 12-117
Cow position: chr12:5680608-5680714 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 12-117
Cow position: chr12:23855765-23855867 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 14-117
Cow position: chr12:29057315-29057420 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 15-117
Cow position: chr12:42181200-42181098 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 83
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 16-117
Cow position: chr12:21780092-21780193 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 16-118
Cow position: chr12:6241249-6241351 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 16-119
Cow position: chr12:6410805-6410701 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 16-120
Cow position: chr12:6210228-6210124 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 17-117
Cow position: chr12:35368573-35368673 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 17-119
Cow position: chr12:25452516-25452414 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 20-115
Cow position: chr12:45168085-45167990 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 85
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 20-117
Cow position: chr12:30662016-30661919 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-117
Cow position: chr12:39675563-39675466 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr12:4793131-4793230 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr12:36994182-36994083 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-126
Cow position: chr12:6754130-6754236 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 21-114
Cow position: chr12:4797235-4797328 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 82
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 21-119
Cow position: chr12:7000668-7000571 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 21-119
Cow position: chr12:45002132-45002034 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 81
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 21-126
Cow position: chr12:28582569-28582468 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 22-116
Cow position: chr12:18420408-18420500 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 25-120
Cow position: chr12:3675588-3675493 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 11-119
Cow position: chr13:3989218-3989112 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 12-115
Cow position: chr13:29831411-29831513 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 12-119
Cow position: chr13:13176671-13176564 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr13:24230235-24230128 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr13:37640609-37640503 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 12-119
Cow position: chr13:43762189-43762082 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr13:49022847-49022954 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 13-113
Cow position: chr13:7076275-7076177 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 13-119
Cow position: chr13:1042950-1043055 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 13-119
Cow position: chr13:51116004-51116110 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 92
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 14-116
Cow position: chr13:11061009-11060905 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 14-119
Cow position: chr13:11096198-11096094 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 14-119
Cow position: chr13:17622309-17622202 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 15-117
Cow position: chr13:6974179-6974077 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 15-118
Cow position: chr13:26889240-26889137 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 15-119
Cow position: chr13:6926535-6926431 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 15-119
Cow position: chr13:9117552-9117656 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 15-119
Cow position: chr13:19750734-19750629 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 15-119
Cow position: chr13:40722689-40722793 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 16-117
Cow position: chr13:37592929-37593031 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 18-117
Cow position: chr13:17563756-17563655 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 19-117
Cow position: chr13:3211563-3211465 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 19-119
Cow position: chr13:18166746-18166646 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-117
Cow position: chr13:8524605-8524702 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 20-117
Cow position: chr13:62008120-62008023 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr13:9161935-9161837 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 20-119
Cow position: chr13:9593518-9593419 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr13:15997047-15996948 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr13:23270196-23270291 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 20-119
Cow position: chr13:52055579-52055678 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 21-119
Cow position: chr13:28071885-28071785 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 21-120
Cow position: chr13:61166439-61166537 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 88
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 21-122
Cow position: chr13:51497792-51497893 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 24-117
Cow position: chr13:24110489-24110396 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 26-119
Cow position: chr13:15143836-15143928 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 26-119
Cow position: chr13:16908224-16908131 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 83
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 120-282
Cow position: chr13:28115096-28114935 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 135, 26

Conread position: 4-117
Cow position: chr14:26499691-26499578 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 8-118
Cow position: chr14:17841209-17841320 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 10-119
Cow position: chr14:2038728-2038837 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 11-119
Cow position: chr14:26655055-26655163 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 12-118
Cow position: chr14:40208976-40208870 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr14:2345147-2345038 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 12-119
Cow position: chr14:12954307-12954414 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr14:24236903-24236795 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 12-119
Cow position: chr14:24712546-24712653 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr14:33247349-33247458 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 12-119
Cow position: chr14:33830379-33830273 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 12-119
Cow position: chr14:35018675-35018782 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr14:37447387-37447492 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 66

Conread position: 13-117
Cow position: chr14:4227144-4227249 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 13-117
Cow position: chr14:10609757-10609653 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-117
Cow position: chr14:19594060-19594164 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-143
Cow position: chr14:46062019-46061890 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 124, 0

Conread position: 14-117
Cow position: chr14:25824773-25824668 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 14-124
Cow position: chr14:18763362-18763472 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 15-117
Cow position: chr14:19129581-19129479 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 15-119
Cow position: chr14:19863358-19863462 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 91
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 19-119
Cow position: chr14:18309236-18309336 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 19-119
Cow position: chr14:34199772-34199872 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-114
Cow position: chr14:18717343-18717249 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 79
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-117
Cow position: chr14:19618681-19618778 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-117
Cow position: chr14:37883846-37883943 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-118
Cow position: chr14:4877160-4877256 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 68

Conread position: 20-119
Cow position: chr14:28115117-28115217 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 20-119
Cow position: chr14:33644027-33643931 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 21-117
Cow position: chr14:22997508-22997604 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 21-117
Cow position: chr14:33309435-33309530 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 21-118
Cow position: chr14:40165493-40165396 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 22-116
Cow position: chr14:38285902-38285995 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 121-253
Cow position: chr14:1492889-1493021 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 82, 7

Conread position: 7-119
Cow position: chr15:17196278-17196166 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 12-115
Cow position: chr15:52432471-52432365 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 12-119
Cow position: chr15:12870735-12870846 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 12-120
Cow position: chr15:16112525-16112417 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-115
Cow position: chr15:2141179-2141281 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 93
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 13-115
Cow position: chr15:30982063-30981962 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 13-117
Cow position: chr15:21893903-21893799 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 92
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 8, 69

Conread position: 13-117
Cow position: chr15:31637425-31637321 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-119
Cow position: chr15:244905-244799 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 14-117
Cow position: chr15:5726446-5726345 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 14-117
Cow position: chr15:29542000-29541897 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 14-117
Cow position: chr15:38846024-38845921 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 14-119
Cow position: chr15:6970110-6970005 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 14-119
Cow position: chr15:13285147-13285039 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 14-119
Cow position: chr15:35440960-35441060 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 14-119
Cow position: chr15:41583003-41582898 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 14-119
Cow position: chr15:50322717-50322612 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 92
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 15-117
Cow position: chr15:53231624-53231522 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 15-119
Cow position: chr15:10660431-10660537 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 16-117
Cow position: chr15:14261138-14261237 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 89
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 16-119
Cow position: chr15:15154423-15154318 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 16-119
Cow position: chr15:23719363-23719465 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 17-117
Cow position: chr15:23768137-23768237 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 17-119
Cow position: chr15:4418280-4418382 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 17-119
Cow position: chr15:14176379-14176481 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 18-117
Cow position: chr15:21821804-21821904 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 19-119
Cow position: chr15:11995909-11996009 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 19-119
Cow position: chr15:18671338-18671438 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 20-117
Cow position: chr15:36388408-36388311 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr15:225687-225786 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr15:794904-795003 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr15:12655800-12655898 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 20-119
Cow position: chr15:20351949-20351850 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr15:37205165-37205066 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 20-120
Cow position: chr15:34284293-34284393 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 20-120
Cow position: chr15:46563368-46563467 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 21-119
Cow position: chr15:662352-662450 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 22-119
Cow position: chr15:35417510-35417607 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 23-119
Cow position: chr15:31928782-31928878 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 28-119
Cow position: chr15:32977737-32977828 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 78
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 106-257
Cow position: chr15:18652731-18652884 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 6, 54

Conread position: 112-271
Cow position: chr15:12863695-12863855 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 147, 0

Conread position: 120-358
Cow position: chr15:44897110-44896874 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 146

Conread position: 122-273
Cow position: chr15:45236873-45237023 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 146, 0

Conread position: 431-570
Cow position: chr15:31032834-31032972 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 99, 37

Conread position: 8-124
Cow position: chr16:55968401-55968519 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 12, 0

Conread position: 12-115
Cow position: chr16:55945176-55945072 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 11, 0

Conread position: 12-119
Cow position: chr16:4699025-4698916 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 12-119
Cow position: chr16:11008310-11008417 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr16:15905286-15905178 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 12-119
Cow position: chr16:25839585-25839692 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-115
Cow position: chr16:4736618-4736517 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 13-117
Cow position: chr16:15960324-15960220 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-117
Cow position: chr16:25380530-25380425 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 13-117
Cow position: chr16:30359098-30358993 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 13-119
Cow position: chr16:32327624-32327730 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 13-119
Cow position: chr16:33595970-33595865 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 13-119
Cow position: chr16:44713514-44713409 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 13-119
Cow position: chr16:50289118-50289224 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 14-119
Cow position: chr16:820216-820322 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 9, 0

Conread position: 15-119
Cow position: chr16:45785704-45785809 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 15-120
Cow position: chr16:42444124-42444229 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 15-121
Cow position: chr16:42340163-42340270 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 94
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 7, 0

Conread position: 16-117
Cow position: chr16:8933456-8933358 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 70, 0

Conread position: 17-117
Cow position: chr16:13611483-13611384 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 19-119
Cow position: chr16:13712961-13712861 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 19-119
Cow position: chr16:43800944-43800845 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 23, 0

Conread position: 19-123
Cow position: chr16:16548585-16548690 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 20-117
Cow position: chr16:42433138-42433041 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr16:7549941-7550039 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 20-119
Cow position: chr16:11359124-11359223 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr16:18353983-18353886 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 48, 0

Conread position: 20-119
Cow position: chr16:21317620-21317521 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr16:23955859-23955760 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr16:41530327-41530228 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr16:53408957-53408858 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-120
Cow position: chr16:8323009-8322909 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 21-114
Cow position: chr16:30186619-30186712 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 27-119
Cow position: chr16:11957598-11957506 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 78
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 114-268
Cow position: chr16:13469726-13469881 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 119-276
Cow position: chr16:33148173-33148014 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 137-306
Cow position: chr16:32029840-32029667 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 118, 0

Conread position: 5-117
Cow position: chr17:40673368-40673480 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-119
Cow position: chr17:37816196-37816081 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 6-114
Cow position: chr17:24862457-24862565 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-119
Cow position: chr17:36275333-36275445 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 10-119
Cow position: chr17:13478823-13478713 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 12-116
Cow position: chr17:23883265-23883158 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 12-117
Cow position: chr17:20993032-20992932 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 12-117
Cow position: chr17:31856678-31856783 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr17:1350455-1350562 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr17:22245992-22246101 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 12-119
Cow position: chr17:30718414-30718306 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 13-119
Cow position: chr17:9911766-9911869 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 13-119
Cow position: chr17:21788653-21788547 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 14-117
Cow position: chr17:27203042-27202936 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 95
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 14-117
Cow position: chr17:40288995-40288890 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 14-119
Cow position: chr17:32273681-32273575 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 14-119
Cow position: chr17:34836178-34836283 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 15-116
Cow position: chr17:28814484-28814384 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 15-119
Cow position: chr17:7851095-7851199 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 15-119
Cow position: chr17:11832107-11832003 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 15-119
Cow position: chr17:21489615-21489513 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 16-119
Cow position: chr17:37129208-37129311 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 18-114
Cow position: chr17:25930529-25930432 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 18-119
Cow position: chr17:12342470-12342369 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 19-116
Cow position: chr17:27048168-27048264 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 19-117
Cow position: chr17:21922622-21922524 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 81
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 19-119
Cow position: chr17:25169090-25169190 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 19-120
Cow position: chr17:14762110-14762009 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-112
Cow position: chr17:21604426-21604518 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 82
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 20-117
Cow position: chr17:23798294-23798391 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr17:2275483-2275582 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr17:25032469-25032370 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr17:25126363-25126462 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 20-121
Cow position: chr17:7142874-7142975 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 90
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 21-117
Cow position: chr17:20848537-20848632 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 21-119
Cow position: chr17:36864644-36864742 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 112-254
Cow position: chr17:17449564-17449422 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 119-257
Cow position: chr17:1952631-1952769 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 119-529
Cow position: chr17:25148450-25148035 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 278
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 18, 65

Conread position: 120-268
Cow position: chr17:23564640-23564788 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 422-531
Cow position: chr17:34053779-34053886 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 6-123
Cow position: chr18:19295814-19295927 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 12-114
Cow position: chr18:5078842-5078740 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 12-117
Cow position: chr18:4182256-4182151 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 12-117
Cow position: chr18:52251925-52251821 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 12-119
Cow position: chr18:22055943-22055836 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 12-121
Cow position: chr18:5647744-5647853 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 13-117
Cow position: chr18:14586538-14586434 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-119
Cow position: chr18:2864057-2863952 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 14-117
Cow position: chr18:15025606-15025708 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 14-119
Cow position: chr18:18369426-18369323 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 14-119
Cow position: chr18:37023617-37023512 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 15-117
Cow position: chr18:19883466-19883569 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 15-119
Cow position: chr18:46048687-46048790 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 15-126
Cow position: chr18:47693000-47693111 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 16-117
Cow position: chr18:51643430-51643329 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 17-117
Cow position: chr18:40759143-40759243 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 19-117
Cow position: chr18:16997192-16997290 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr18:45558086-45558186 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 20-119
Cow position: chr18:46072402-46072501 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr18:50359270-50359370 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 89
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 6, 0

Conread position: 20-120
Cow position: chr18:3211817-3211917 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-120
Cow position: chr18:24719252-24719352 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 21-114
Cow position: chr18:47416942-47417035 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 21-117
Cow position: chr18:2098804-2098708 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 21-119
Cow position: chr18:6609918-6609819 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 22-119
Cow position: chr18:4556225-4556131 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 22-119
Cow position: chr18:11377306-11377402 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 23-117
Cow position: chr18:51192798-51192704 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 79
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 26-119
Cow position: chr18:27388529-27388623 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 27-119
Cow position: chr18:15301088-15301180 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 67

Conread position: 118-273
Cow position: chr18:41219114-41218959 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 53

Conread position: 120-551
Cow position: chr18:11648278-11647842 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 288
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 23, 198

Conread position: 128-254
Cow position: chr18:41912094-41912220 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 95
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 422-531
Cow position: chr18:17015228-17015122 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 35, 0

Conread position: 425-531
Cow position: chr18:7115284-7115179 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 42

Conread position: 2-119
Cow position: chr19:52185824-52185705 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 12-117
Cow position: chr19:33237125-33237232 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 12-117
Cow position: chr19:39254496-39254387 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 12-119
Cow position: chr19:15362746-15362638 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 11

Conread position: 12-119
Cow position: chr19:43372992-43373099 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr19:46094684-46094576 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 12-119
Cow position: chr19:47986811-47986919 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 12-120
Cow position: chr19:22134196-22134091 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 70, 0

Conread position: 12-121
Cow position: chr19:6344024-6344135 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 106

Conread position: 13-117
Cow position: chr19:22449972-22449868 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 13-117
Cow position: chr19:25526240-25526342 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 14-112
Cow position: chr19:43647368-43647466 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 14-120
Cow position: chr19:6079403-6079300 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 15-114
Cow position: chr19:41024179-41024279 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 5, 0

Conread position: 15-119
Cow position: chr19:3870562-3870667 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 15-119
Cow position: chr19:10081031-10081135 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 16-117
Cow position: chr19:36845207-36845308 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 16-117
Cow position: chr19:39385083-39384983 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 16-119
Cow position: chr19:30910099-30910206 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 16-119
Cow position: chr19:39781477-39781580 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 17-119
Cow position: chr19:5406458-5406560 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 83
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 17-126
Cow position: chr19:6477668-6477777 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 19-117
Cow position: chr19:30007152-30007250 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 20-114
Cow position: chr19:34819227-34819131 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 20-117
Cow position: chr19:2221114-2221017 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-117
Cow position: chr19:26167951-26167854 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-118
Cow position: chr19:19919500-19919402 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-118
Cow position: chr19:39613204-39613106 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr19:26976106-26976007 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr19:31536088-31536187 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-120
Cow position: chr19:11194801-11194701 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 20-120
Cow position: chr19:31595262-31595362 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 21-116
Cow position: chr19:14573286-14573381 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 21-119
Cow position: chr19:4800704-4800802 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 21-119
Cow position: chr19:7637273-7637175 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 81
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 21-119
Cow position: chr19:21176779-21176681 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 21-119
Cow position: chr19:41695699-41695601 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 81
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 21-119
Cow position: chr19:53378663-53378762 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 22-119
Cow position: chr19:31846587-31846490 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 26-117
Cow position: chr19:54915725-54915634 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 79
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 120-272
Cow position: chr19:35739920-35739766 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 51

Conread position: 6-119
Cow position: chr2:26102725-26102839 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 7-119
Cow position: chr2:45542440-45542327 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 9-117
Cow position: chr2:14734066-14734175 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 12-117
Cow position: chr2:22113735-22113626 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 12-117
Cow position: chr2:46125829-46125727 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 9, 22

Conread position: 12-118
Cow position: chr2:55496329-55496225 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 22

Conread position: 12-119
Cow position: chr2:65036315-65036209 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 13-114
Cow position: chr2:12988557-12988658 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-119
Cow position: chr2:19137924-19137818 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 14-117
Cow position: chr2:41954853-41954956 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 14-119
Cow position: chr2:32416893-32416788 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 10

Conread position: 14-119
Cow position: chr2:66149291-66149397 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 15-118
Cow position: chr2:63331836-63331733 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 16-117
Cow position: chr2:30642694-30642593 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 16-117
Cow position: chr2:58135423-58135322 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 17-117
Cow position: chr2:41007571-41007471 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 17-119
Cow position: chr2:24722301-24722199 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 18-119
Cow position: chr2:42255406-42255507 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 19-117
Cow position: chr2:54967980-54968078 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 19-119
Cow position: chr2:44222796-44222896 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 19-119
Cow position: chr2:70896005-70896106 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 19-119
Cow position: chr2:70945376-70945476 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 19-120
Cow position: chr2:15219085-15219186 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 20-116
Cow position: chr2:69823562-69823659 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 20-117
Cow position: chr2:80963673-80963580 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 20-119
Cow position: chr2:61421195-61421096 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr2:71486751-71486850 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr2:76861483-76861384 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-120
Cow position: chr2:2827716-2827815 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 20-120
Cow position: chr2:21382877-21382780 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 22-119
Cow position: chr2:64773360-64773457 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 24-117
Cow position: chr2:57802512-57802419 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 120-360
Cow position: chr2:9400086-9400321 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 12, 154

Conread position: 137-286
Cow position: chr2:41697096-41697246 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 118, 136

Conread position: 12-117
Cow position: chr20:20967328-20967433 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 12-120
Cow position: chr20:17251725-17251832 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 13-119
Cow position: chr20:23780904-23781010 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 15-109
Cow position: chr20:24000787-24000693 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 79
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 16-117
Cow position: chr20:13652355-13652255 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 16-120
Cow position: chr20:14879799-14879904 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 18-115
Cow position: chr20:16941275-16941178 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 8, 52

Conread position: 19-119
Cow position: chr20:11482120-11482020 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 19-119
Cow position: chr20:34777194-34777294 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 20-117
Cow position: chr20:37919355-37919258 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 20-117
Cow position: chr20:40157915-40158012 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr20:4334515-4334416 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr20:12581939-12581840 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 22-117
Cow position: chr20:16492089-16492185 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 22-119
Cow position: chr20:10772223-10772319 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 22-119
Cow position: chr20:15565810-15565715 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 22-120
Cow position: chr20:21428178-21428277 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 22-120
Cow position: chr20:29845068-29845166 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 22-121
Cow position: chr20:21928922-21929021 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 23-119
Cow position: chr20:19751325-19751421 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 80
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 26-118
Cow position: chr20:9433608-9433700 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 119-258
Cow position: chr20:35722759-35722898 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 120-265
Cow position: chr20:23198070-23198219 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 120-267
Cow position: chr20:35704549-35704696 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 12-116
Cow position: chr21:30607059-30606954 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 12-117
Cow position: chr21:10004857-10004753 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 12-117
Cow position: chr21:10538229-10538122 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 12-118
Cow position: chr21:36795631-36795737 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr21:977120-977013 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr21:26244940-26245049 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 12-119
Cow position: chr21:46132604-46132709 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 12-119
Cow position: chr21:47363708-47363599 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 12-126
Cow position: chr21:46143987-46144101 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-117
Cow position: chr21:7581876-7581772 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-118
Cow position: chr21:41579784-41579890 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 13-119
Cow position: chr21:42841569-42841462 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 14-113
Cow position: chr21:40432474-40432574 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 14-117
Cow position: chr21:32339713-32339607 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 15-113
Cow position: chr21:36789826-36789924 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 81
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 15-117
Cow position: chr21:15584389-15584286 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 15-117
Cow position: chr21:17642953-17642852 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 15-119
Cow position: chr21:30835395-30835498 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 7, 50

Conread position: 16-121
Cow position: chr21:7768470-7768575 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 16-121
Cow position: chr21:20152988-20153093 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 16-138
Cow position: chr21:3585337-3585214 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 20-114
Cow position: chr21:12461931-12461837 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 20-117
Cow position: chr21:395904-396000 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 20-117
Cow position: chr21:25383060-25383159 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 20-117
Cow position: chr21:42414062-42413964 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 20-119
Cow position: chr21:1591590-1591689 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr21:6051539-6051638 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr21:19258858-19258953 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 20-120
Cow position: chr21:24642557-24642656 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 20-121
Cow position: chr21:41597847-41597948 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 21-117
Cow position: chr21:712979-713076 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 21-119
Cow position: chr21:1764830-1764735 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 21-119
Cow position: chr21:13365380-13365477 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 22-117
Cow position: chr21:41610205-41610300 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 22-119
Cow position: chr21:868886-868789 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 23-111
Cow position: chr21:13163898-13163986 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 77
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 118-256
Cow position: chr21:4939629-4939490 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 119-257
Cow position: chr21:40724085-40723946 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 120-272
Cow position: chr21:12898243-12898397 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 9-117
Cow position: chr22:6289545-6289437 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 86
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 11-117
Cow position: chr22:34398496-34398390 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 12-111
Cow position: chr22:44180554-44180653 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 12-112
Cow position: chr22:5837231-5837331 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 12-117
Cow position: chr22:23372903-23372798 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 12-118
Cow position: chr22:24611131-24611026 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 12-119
Cow position: chr22:40789527-40789634 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 12-120
Cow position: chr22:28058090-28057981 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 13-111
Cow position: chr22:12749939-12749841 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 81
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-117
Cow position: chr22:8840568-8840671 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 13-119
Cow position: chr22:10752580-10752474 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-120
Cow position: chr22:25733006-25732898 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 14-117
Cow position: chr22:26339718-26339820 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 14-119
Cow position: chr22:37201811-37201917 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 15-117
Cow position: chr22:23176477-23176375 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 83
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 15-117
Cow position: chr22:28704148-28704250 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 15-119
Cow position: chr22:10553721-10553617 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 91
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 15-119
Cow position: chr22:14691007-14690903 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 15-119
Cow position: chr22:28672109-28672213 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 16-112
Cow position: chr22:45752779-45752876 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 16-117
Cow position: chr22:16044452-16044350 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 16-117
Cow position: chr22:23398440-23398338 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 16-119
Cow position: chr22:7832389-7832286 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 16-119
Cow position: chr22:12315776-12315878 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 17-117
Cow position: chr22:19511273-19511373 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 19-119
Cow position: chr22:10285937-10286039 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 75, 8

Conread position: 20-107
Cow position: chr22:27944047-27944134 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-114
Cow position: chr22:8733369-8733274 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 20-114
Cow position: chr22:16806564-16806658 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 79
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-114
Cow position: chr22:30643165-30643071 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-117
Cow position: chr22:4156848-4156751 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 20-117
Cow position: chr22:26184191-26184095 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 20-119
Cow position: chr22:534468-534567 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr22:11344479-11344578 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 20-126
Cow position: chr22:3965155-3965261 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 21-115
Cow position: chr22:37324514-37324608 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 21-117
Cow position: chr22:6097047-6096951 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 80
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 21-117
Cow position: chr22:16724717-16724621 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 21-119
Cow position: chr22:6326414-6326512 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 22-117
Cow position: chr22:34726638-34726734 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 22-126
Cow position: chr22:877486-877590 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 23-119
Cow position: chr22:30964100-30964196 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 120-282
Cow position: chr22:3246563-3246726 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 123-360
Cow position: chr22:15935165-15935399 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 9, 153

Conread position: 8-114
Cow position: chr23:18403969-18404075 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-119
Cow position: chr23:23409697-23409806 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 96
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 12-119
Cow position: chr23:19371109-19371001 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 12-119
Cow position: chr23:39275857-39275965 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 12-132
Cow position: chr23:38503139-38503015 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 72, 114

Conread position: 13-119
Cow position: chr23:4329707-4329601 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 14-117
Cow position: chr23:1398073-1397967 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 14-121
Cow position: chr23:20002227-20002330 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 15-117
Cow position: chr23:1655864-1655966 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 15-117
Cow position: chr23:1936673-1936571 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 83
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 15-119
Cow position: chr23:30655841-30655740 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 8, 62

Conread position: 16-117
Cow position: chr23:1921256-1921155 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 16-117
Cow position: chr23:38455209-38455107 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 19-114
Cow position: chr23:57190-57095 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 19-119
Cow position: chr23:4562859-4562959 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 20-116
Cow position: chr23:26283699-26283795 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 80
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-117
Cow position: chr23:3262522-3262426 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 20-117
Cow position: chr23:21309437-21309340 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr23:3244494-3244395 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr23:7696533-7696633 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 20-119
Cow position: chr23:23904353-23904254 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-120
Cow position: chr23:27544802-27544902 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 21-117
Cow position: chr23:4877336-4877432 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 21-119
Cow position: chr23:12334186-12334283 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 21-119
Cow position: chr23:16700066-16699968 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 21-119
Cow position: chr23:18402314-18402216 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 22-119
Cow position: chr23:30950931-30951028 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 24-120
Cow position: chr23:4968545-4968449 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 80
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 25-120
Cow position: chr23:39775705-39775801 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 119-300
Cow position: chr23:36379218-36379403 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 68, 148

Conread position: 120-283
Cow position: chr23:4456598-4456438 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 139, 51

Conread position: 9-119
Cow position: chr24:43832467-43832575 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 95
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 12-117
Cow position: chr24:34496059-34496166 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 12-119
Cow position: chr24:18614941-18615048 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr24:27290811-27290918 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr24:28600497-28600388 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 14-119
Cow position: chr24:29606091-29605986 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 14-120
Cow position: chr24:28470738-28470632 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 15-119
Cow position: chr24:19769431-19769536 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 15-119
Cow position: chr24:21894993-21895096 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 15-119
Cow position: chr24:41405833-41405941 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 16-104
Cow position: chr24:10012696-10012784 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 77
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 16-116
Cow position: chr24:33598326-33598226 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 16-118
Cow position: chr24:39523505-39523403 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 18-119
Cow position: chr24:18355155-18355255 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 19-117
Cow position: chr24:19623803-19623900 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 19-119
Cow position: chr24:27900678-27900778 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 19-120
Cow position: chr24:29673469-29673570 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-117
Cow position: chr24:18999995-19000092 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 21-119
Cow position: chr24:31159568-31159662 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 22-117
Cow position: chr24:27202039-27202133 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 22-117
Cow position: chr24:32054611-32054706 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 86
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 23-117
Cow position: chr24:15347540-15347634 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 23-120
Cow position: chr24:11840138-11840235 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 4-120
Cow position: chr25:26072606-26072491 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 75

Conread position: 6-119
Cow position: chr25:10359584-10359694 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 12-119
Cow position: chr25:13272531-13272638 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 12-120
Cow position: chr25:21893300-21893408 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-114
Cow position: chr25:36840357-36840460 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 9, 95

Conread position: 13-116
Cow position: chr25:15377290-15377392 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 13-119
Cow position: chr25:33457694-33457801 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 14-108
Cow position: chr25:16361708-16361614 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 79
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 14-119
Cow position: chr25:11585482-11585587 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 14-119
Cow position: chr25:22751042-22750938 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 14-119
Cow position: chr25:23817877-23817771 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 14-123
Cow position: chr25:7581466-7581358 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 15-119
Cow position: chr25:28187980-28187876 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 5, 28

Conread position: 16-119
Cow position: chr25:20008098-20008202 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 19-115
Cow position: chr25:4009062-4009158 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 80
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 19-117
Cow position: chr25:6474118-6474020 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 81
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 19-119
Cow position: chr25:10364365-10364265 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 20-117
Cow position: chr25:30816859-30816956 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-118
Cow position: chr25:35109299-35109201 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 81
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr25:9349311-9349214 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 20-120
Cow position: chr25:26160935-26161039 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 21-117
Cow position: chr25:5920052-5920148 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 80
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 21-120
Cow position: chr25:18988361-18988460 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 22-114
Cow position: chr25:16921825-16921733 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 78
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 23-119
Cow position: chr25:13503406-13503502 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 120-271
Cow position: chr25:10763132-10763287 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 12-117
Cow position: chr26:33253336-33253230 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 12-124
Cow position: chr26:29664178-29664064 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 13-117
Cow position: chr26:19774317-19774213 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 18

Conread position: 13-121
Cow position: chr26:16435674-16435566 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 14-118
Cow position: chr26:14578310-14578414 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 14-119
Cow position: chr26:8700064-8699959 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 92
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 14-119
Cow position: chr26:22152210-22152315 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 15-119
Cow position: chr26:22603054-22602950 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 16-119
Cow position: chr26:6865009-6865112 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 19-119
Cow position: chr26:22249489-22249389 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 19-120
Cow position: chr26:16594511-16594413 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 20-119
Cow position: chr26:8352958-8353057 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr26:10938961-10939060 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 20-120
Cow position: chr26:10965605-10965505 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 21-198
Cow position: chr26:21992092-21992276 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 12-117
Cow position: chr27:14303730-14303625 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 16, 69

Conread position: 12-119
Cow position: chr27:6241201-6241307 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 12-119
Cow position: chr27:20812897-20812790 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr27:22454781-22454890 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 13-117
Cow position: chr27:7731266-7731370 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 14-117
Cow position: chr27:27641022-27641124 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 15-117
Cow position: chr27:11435333-11435435 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 83
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 15-121
Cow position: chr27:16088796-16088687 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 16-119
Cow position: chr27:17646179-17646283 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 17-119
Cow position: chr27:12191492-12191593 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 18-117
Cow position: chr27:29319398-29319298 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 6, 0

Conread position: 20-117
Cow position: chr27:21976037-21975940 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-118
Cow position: chr27:21393522-21393621 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 22-115
Cow position: chr27:20584474-20584566 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 22-119
Cow position: chr27:31386648-31386746 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 23-119
Cow position: chr27:17918332-17918428 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 120-256
Cow position: chr27:26472344-26472480 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 72

Conread position: 120-271
Cow position: chr27:24716145-24715993 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 139, 0

Conread position: 9-119
Cow position: chr28:8149666-8149556 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 87
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 12-117
Cow position: chr28:5144555-5144447 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 12-119
Cow position: chr28:7156806-7156913 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-117
Cow position: chr28:21355202-21355305 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 14-114
Cow position: chr28:11866694-11866594 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 14-114
Cow position: chr28:17012326-17012223 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 14-117
Cow position: chr28:4881271-4881166 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 14-119
Cow position: chr28:27161355-27161251 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 92
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 95, 0

Conread position: 15-114
Cow position: chr28:3011297-3011200 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 16-119
Cow position: chr28:4823578-4823680 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 16-119
Cow position: chr28:25806546-25806649 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 16-119
Cow position: chr28:26743600-26743702 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 17-126
Cow position: chr28:26922394-26922285 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-116
Cow position: chr28:4765651-4765749 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 20-117
Cow position: chr28:5826927-5827024 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 21-120
Cow position: chr28:19564250-19564151 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 22-119
Cow position: chr28:8408713-8408810 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 23-117
Cow position: chr28:20397390-20397296 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 79
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 23-121
Cow position: chr28:23007750-23007652 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 24-117
Cow position: chr28:2898970-2899063 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 29-117
Cow position: chr28:9384301-9384213 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 76
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 113-360
Cow position: chr28:19226383-19226143 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 9, 76

Conread position: 12-117
Cow position: chr29:6293516-6293411 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 12-117
Cow position: chr29:41530812-41530917 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr29:5210454-5210560 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 13-119
Cow position: chr29:11042395-11042501 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-119
Cow position: chr29:35501691-35501585 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 14-116
Cow position: chr29:2071608-2071505 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 14-117
Cow position: chr29:17154743-17154845 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 14-117
Cow position: chr29:40299056-40298953 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 15-120
Cow position: chr29:31934344-31934449 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 16-117
Cow position: chr29:11053893-11053793 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 16-117
Cow position: chr29:31981797-31981898 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 16-117
Cow position: chr29:44988823-44988723 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 16-119
Cow position: chr29:868741-868844 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 19-117
Cow position: chr29:6286192-6286094 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 19-123
Cow position: chr29:9139391-9139494 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 20-117
Cow position: chr29:13639397-13639299 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 20-117
Cow position: chr29:43544632-43544536 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 20-121
Cow position: chr29:8686300-8686401 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 21-119
Cow position: chr29:5788999-5789097 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 6, 77

Conread position: 24-118
Cow position: chr29:4423465-4423371 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 29-118
Cow position: chr29:40633622-40633711 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 77
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 127-360
Cow position: chr29:2543723-2543943 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 137, 60

Conread position: 9-117
Cow position: chr3:57877502-57877611 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 11-119
Cow position: chr3:23444949-23444841 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 11-119
Cow position: chr3:36913986-36914097 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 12-117
Cow position: chr3:12711975-12711870 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 12-117
Cow position: chr3:23471518-23471414 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 12-117
Cow position: chr3:27976584-27976479 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 12-117
Cow position: chr3:37041360-37041464 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 12-117
Cow position: chr3:48810705-48810600 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 12-117
Cow position: chr3:81277528-81277423 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 12-118
Cow position: chr3:20515879-20515772 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 12-119
Cow position: chr3:11292308-11292201 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 92
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr3:24935304-24935412 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 12-119
Cow position: chr3:28258036-28258142 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 12-119
Cow position: chr3:71231334-71231442 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 81

Conread position: 12-119
Cow position: chr3:76268036-76267928 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 12-119
Cow position: chr3:80053603-80053495 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 78

Conread position: 12-122
Cow position: chr3:55819698-55819808 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-119
Cow position: chr3:21997847-21997741 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 14-115
Cow position: chr3:54100784-54100683 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 14-117
Cow position: chr3:64373215-64373111 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 14-119
Cow position: chr3:14546944-14547049 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 14-119
Cow position: chr3:70401839-70401943 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 15-116
Cow position: chr3:81234332-81234433 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 15-119
Cow position: chr3:11711909-11712012 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 15-119
Cow position: chr3:53704020-53703916 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 15-119
Cow position: chr3:65019922-65019818 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 15-119
Cow position: chr3:71497197-71497091 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 15-119
Cow position: chr3:73708990-73709094 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 15-120
Cow position: chr3:5100829-5100724 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 15-120
Cow position: chr3:57624408-57624512 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 16-119
Cow position: chr3:48252829-48252932 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 16-119
Cow position: chr3:56704377-56704274 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 18-119
Cow position: chr3:59474068-59474169 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 20-116
Cow position: chr3:15228875-15228779 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-117
Cow position: chr3:57760446-57760543 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr3:5097155-5097254 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr3:43727026-43727126 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 20-119
Cow position: chr3:64280983-64280883 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 20-119
Cow position: chr3:70334747-70334648 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-124
Cow position: chr3:74900692-74900588 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 20-126
Cow position: chr3:81359159-81359053 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 21-117
Cow position: chr3:73820419-73820324 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 21-119
Cow position: chr3:1517563-1517465 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 21-119
Cow position: chr3:4319660-4319758 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 21-119
Cow position: chr3:53739236-53739138 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 21-120
Cow position: chr3:46541880-46541781 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 22-117
Cow position: chr3:20841923-20841828 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 22-119
Cow position: chr3:17934988-17934891 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 23-120
Cow position: chr3:28908252-28908155 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 120-257
Cow position: chr3:69219782-69219919 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 124, 72

Conread position: 120-283
Cow position: chr3:30048750-30048586 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 139, 28

Conread position: 120-360
Cow position: chr3:17540184-17540429 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 75

Conread position: 5-119
Cow position: chr4:3268413-3268301 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 11-116
Cow position: chr4:44782331-44782435 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 12-116
Cow position: chr4:39231564-39231460 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 12-117
Cow position: chr4:44773085-44772981 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 12-117
Cow position: chr4:56239903-56239798 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 12-117
Cow position: chr4:65432107-65432212 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 12-118
Cow position: chr4:45862374-45862480 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr4:45626671-45626563 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 12-119
Cow position: chr4:51920501-51920608 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-119
Cow position: chr4:2602193-2602297 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 13-119
Cow position: chr4:19098428-19098536 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 10

Conread position: 13-120
Cow position: chr4:34369492-34369385 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 14-117
Cow position: chr4:20871-20974 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 14-119
Cow position: chr4:42232064-42231960 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 15-119
Cow position: chr4:19102921-19102818 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 15-119
Cow position: chr4:45636126-45636230 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 15-119
Cow position: chr4:64040075-64040179 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 12, 46

Conread position: 16-119
Cow position: chr4:37935324-37935221 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 90
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 16-119
Cow position: chr4:54191049-54191153 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 52

Conread position: 16-126
Cow position: chr4:508948-508838 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 17-119
Cow position: chr4:3850513-3850615 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 17-119
Cow position: chr4:32726186-32726288 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 19-117
Cow position: chr4:5460897-5460799 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 19-119
Cow position: chr4:51729914-51730014 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-114
Cow position: chr4:65175180-65175086 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 20-117
Cow position: chr4:12591249-12591152 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr4:43542506-43542407 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr4:59377874-59377973 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 22-119
Cow position: chr4:40414661-40414564 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 23-119
Cow position: chr4:45775370-45775274 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 25-117
Cow position: chr4:12127669-12127577 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 28-113
Cow position: chr4:46560153-46560238 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 76
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 120-257
Cow position: chr4:44846990-44847129 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 11-119
Cow position: chr5:49501835-49501727 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 94
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 11-119
Cow position: chr5:67212350-67212458 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 11-122
Cow position: chr5:16938031-16937921 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 109, 9

Conread position: 12-117
Cow position: chr5:15479116-15479221 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr5:4710160-4710055 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 12-119
Cow position: chr5:30949925-30949818 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr5:43992314-43992421 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 95
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr5:58555126-58555234 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 12-119
Cow position: chr5:58793618-58793510 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 12-120
Cow position: chr5:31918630-31918740 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 12, 86

Conread position: 12-123
Cow position: chr5:61914554-61914665 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 64, 12

Conread position: 13-117
Cow position: chr5:5257296-5257193 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 13-117
Cow position: chr5:23678708-23678607 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 13-119
Cow position: chr5:41165079-41165185 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-119
Cow position: chr5:52645089-52644983 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-119
Cow position: chr5:57101532-57101426 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 7, 64

Conread position: 13-120
Cow position: chr5:56613573-56613466 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 14-119
Cow position: chr5:4267662-4267767 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 14-119
Cow position: chr5:39258498-39258602 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 67

Conread position: 14-119
Cow position: chr5:45574373-45574268 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 14-119
Cow position: chr5:62142667-62142773 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 15-114
Cow position: chr5:50575777-50575876 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 15-117
Cow position: chr5:43844669-43844568 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 17-117
Cow position: chr5:44796739-44796638 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 19-116
Cow position: chr5:5855855-5855952 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-114
Cow position: chr5:9090025-9089931 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr5:29828044-29828144 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 20-119
Cow position: chr5:37808665-37808566 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr5:39447537-39447438 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr5:49474547-49474448 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr5:52165179-52165081 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 20-119
Cow position: chr5:58446805-58446904 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 21-118
Cow position: chr5:35969532-35969628 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 21-119
Cow position: chr5:11668187-11668088 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 21-119
Cow position: chr5:55795968-55795869 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 22-121
Cow position: chr5:50101376-50101275 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 24-119
Cow position: chr5:63987443-63987349 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 88-228
Cow position: chr5:55767799-55767940 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 11-119
Cow position: chr6:60451429-60451538 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 12-117
Cow position: chr6:15447192-15447089 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 12-119
Cow position: chr6:18049019-18048913 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 12-119
Cow position: chr6:19292802-19292912 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 12-119
Cow position: chr6:47339352-47339245 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 12-120
Cow position: chr6:528280-528172 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-119
Cow position: chr6:67806010-67805904 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 14-117
Cow position: chr6:60118156-60118259 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 14-119
Cow position: chr6:6067695-6067591 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 14-119
Cow position: chr6:10176296-10176191 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 14-121
Cow position: chr6:16700266-16700374 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 14-121
Cow position: chr6:37149195-37149302 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 15-119
Cow position: chr6:143367-143264 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 16-119
Cow position: chr6:6343434-6343541 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 16-123
Cow position: chr6:1703811-1703915 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 60

Conread position: 19-116
Cow position: chr6:23401981-23401885 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 19-118
Cow position: chr6:60740025-60740124 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 19-118
Cow position: chr6:67214760-67214859 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-116
Cow position: chr6:48469012-48469108 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-117
Cow position: chr6:582260-582164 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 20-117
Cow position: chr6:62669877-62669974 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr6:8788025-8787926 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr6:37463034-37463133 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr6:54867529-54867628 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 20-124
Cow position: chr6:38207477-38207374 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 22-120
Cow position: chr6:37395387-37395289 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 24-119
Cow position: chr6:54573275-54573370 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-531
Cow position: chr6:44820101-44819995 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 9, 103

Conread position: 5-119
Cow position: chr7:15739587-15739472 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 7-119
Cow position: chr7:4812016-4812129 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 11-119
Cow position: chr7:4129775-4129667 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 11-120
Cow position: chr7:3336544-3336436 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 11-137
Cow position: chr7:36569866-36569995 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 12-117
Cow position: chr7:23568730-23568625 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 61

Conread position: 12-119
Cow position: chr7:9175483-9175590 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr7:45927157-45927052 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 12-119
Cow position: chr7:56081602-56081709 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 92
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 13-119
Cow position: chr7:6116358-6116252 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-119
Cow position: chr7:15566759-15566865 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-120
Cow position: chr7:8089173-8089279 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 89, 19

Conread position: 14-117
Cow position: chr7:24460960-24461062 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 14-119
Cow position: chr7:9136845-9136951 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 14-119
Cow position: chr7:17757041-17757146 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 75

Conread position: 14-125
Cow position: chr7:13218140-13218028 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 7, 64

Conread position: 16-104
Cow position: chr7:63016244-63016332 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 79
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 16-117
Cow position: chr7:24928013-24927912 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 16-117
Cow position: chr7:38429702-38429600 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 17-117
Cow position: chr7:28563379-28563279 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 17-117
Cow position: chr7:45158135-45158233 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 17-119
Cow position: chr7:17816760-17816862 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 19-118
Cow position: chr7:39947236-39947137 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 19-120
Cow position: chr7:9161663-9161561 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 20-116
Cow position: chr7:26485588-26485683 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 20-119
Cow position: chr7:11015696-11015795 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr7:24220682-24220781 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr7:29505129-29505228 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr7:44454266-44454167 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr7:48243687-48243785 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 20-119
Cow position: chr7:49630191-49630290 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 21-112
Cow position: chr7:10885978-10886069 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 79
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 21-119
Cow position: chr7:11176714-11176616 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 65

Conread position: 22-122
Cow position: chr7:45593055-45593156 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 24-119
Cow position: chr7:53653001-53653096 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 120-268
Cow position: chr7:17439707-17439556 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 120-279
Cow position: chr7:31117274-31117435 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 73

Conread position: 12-117
Cow position: chr8:36729643-36729749 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 12-117
Cow position: chr8:40579437-40579334 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 12-119
Cow position: chr8:5893919-5894026 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 53

Conread position: 12-119
Cow position: chr8:20683947-20684054 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr8:29026664-29026555 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 12-119
Cow position: chr8:37347482-37347373 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 94
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 12-120
Cow position: chr8:31762846-31762738 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 65, 11

Conread position: 13-117
Cow position: chr8:8097291-8097187 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 13-117
Cow position: chr8:30324299-30324403 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-119
Cow position: chr8:4525056-4525163 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 13-120
Cow position: chr8:17167546-17167653 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-120
Cow position: chr8:53633245-53633140 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 15-117
Cow position: chr8:4500470-4500572 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 15-119
Cow position: chr8:19011817-19011713 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 15-119
Cow position: chr8:36375538-36375434 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 15-119
Cow position: chr8:48513036-48512931 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 16-118
Cow position: chr8:37334151-37334253 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 16-119
Cow position: chr8:43168050-43167946 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 16-119
Cow position: chr8:49659108-49659210 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 17-117
Cow position: chr8:3922736-3922636 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 17-117
Cow position: chr8:58520273-58520374 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 17-119
Cow position: chr8:10846219-10846321 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 17-119
Cow position: chr8:45879017-45879116 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 17-119
Cow position: chr8:45925599-45925698 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 18-116
Cow position: chr8:47461838-47461938 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 18-119
Cow position: chr8:34042433-34042534 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 19-116
Cow position: chr8:1394213-1394310 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 19-116
Cow position: chr8:13723391-13723488 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 19-119
Cow position: chr8:28209964-28210064 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-117
Cow position: chr8:32192673-32192770 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-118
Cow position: chr8:20657379-20657281 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 20-120
Cow position: chr8:10297754-10297654 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 20-123
Cow position: chr8:11722515-11722411 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 22-117
Cow position: chr8:25388125-25388218 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 22-119
Cow position: chr8:48091658-48091561 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 27-119
Cow position: chr8:5884701-5884609 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 88-257
Cow position: chr8:4935308-4935140 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 156, 12

Conread position: 120-257
Cow position: chr8:44480037-44479898 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 11-119
Cow position: chr9:16300503-16300611 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 11-119
Cow position: chr9:33598051-33597944 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 12-118
Cow position: chr9:36445683-36445579 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 12-119
Cow position: chr9:11319569-11319676 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr9:19493401-19493508 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 94
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 12-119
Cow position: chr9:19903150-19903040 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 12-119
Cow position: chr9:28354583-28354475 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 12-120
Cow position: chr9:23797301-23797193 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 13-112
Cow position: chr9:5469930-5469831 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-114
Cow position: chr9:29185074-29185174 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 13-117
Cow position: chr9:5433696-5433592 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-117
Cow position: chr9:24652468-24652364 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 13-117
Cow position: chr9:55321701-55321597 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 14-117
Cow position: chr9:44584655-44584553 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 14-117
Cow position: chr9:52839818-52839920 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 14-119
Cow position: chr9:4580341-4580446 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 14-119
Cow position: chr9:9552153-9552048 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 14-119
Cow position: chr9:32982010-32982117 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 15-119
Cow position: chr9:49709906-49709805 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 15-119
Cow position: chr9:50080978-50081082 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 16-114
Cow position: chr9:22152024-22152122 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 6, 51

Conread position: 16-117
Cow position: chr9:59386706-59386809 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 16-119
Cow position: chr9:47906220-47906324 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 16-119
Cow position: chr9:55532874-55532772 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 18-119
Cow position: chr9:37069498-37069601 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 19-117
Cow position: chr9:44915038-44915137 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 22

Conread position: 19-119
Cow position: chr9:18217041-18217141 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-116
Cow position: chr9:41283072-41282976 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 20-117
Cow position: chr9:58368940-58369036 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 20-119
Cow position: chr9:34284011-34283911 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 20-119
Cow position: chr9:42445926-42446025 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr9:43871032-43870933 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chr9:47214488-47214587 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 20-120
Cow position: chr9:33347433-33347533 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 20-120
Cow position: chr9:40776855-40776755 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 21-117
Cow position: chr9:27279365-27279269 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 21-118
Cow position: chr9:5072782-5072879 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 21-121
Cow position: chr9:1370984-1370884 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 22-117
Cow position: chr9:8534635-8534730 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 22-119
Cow position: chr9:38289271-38289364 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 23-117
Cow position: chr9:7805907-7806001 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 24-114
Cow position: chr9:25375683-25375772 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 24-115
Cow position: chr9:35167229-35167138 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 79
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 34-119
Cow position: chr9:34014206-34014291 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 75
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-116
Cow position: chrX:35278311-35278424 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 9-117
Cow position: chrX:21327899-21328009 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 11-124
Cow position: chrX:32910094-32910207 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 12-113
Cow position: chrX:20743595-20743696 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 12-117
Cow position: chrX:37910435-37910541 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 12-119
Cow position: chrX:34502908-34503018 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 12-119
Cow position: chrX:38218705-38218812 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 13-119
Cow position: chrX:878388-878282 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-119
Cow position: chrX:27680390-27680496 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-119
Cow position: chrX:42855450-42855556 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 14-117
Cow position: chrX:42492530-42492427 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 14-117
Cow position: chrX:42893916-42894022 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 14-119
Cow position: chrX:11717791-11717685 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 14-119
Cow position: chrX:23514022-23513919 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 14-119
Cow position: chrX:27394033-27393928 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 14-120
Cow position: chrX:11763007-11762902 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 14-140
Cow position: chrX:23561849-23561977 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 15-117
Cow position: chrX:29733598-29733496 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 15-119
Cow position: chrX:11082629-11082524 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 16-117
Cow position: chrX:27511422-27511524 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 16-117
Cow position: chrX:40680608-40680710 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 16-117
Cow position: chrX:42450019-42449918 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 16-119
Cow position: chrX:41068720-41068823 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 18-119
Cow position: chrX:11656077-11656179 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 18-119
Cow position: chrX:39180237-39180135 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 19-117
Cow position: chrX:7277909-7278007 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 19-117
Cow position: chrX:31515171-31515270 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 20-110
Cow position: chrX:1572140-1572050 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 78
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-117
Cow position: chrX:29680262-29680165 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-117
Cow position: chrX:38964107-38964204 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chrX:5872316-5872415 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chrX:25411906-25412005 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chrX:27075052-27074953 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chrX:29553284-29553383 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-119
Cow position: chrX:29601829-29601730 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 21-117
Cow position: chrX:3806682-3806778 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 21-119
Cow position: chrX:25788905-25788807 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 81
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 22-117
Cow position: chrX:161413-161508 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 22-119
Cow position: chrX:6213871-6213968 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 22-119
Cow position: chrX:19943233-19943138 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 22-119
Cow position: chrX:22624477-22624574 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 23-117
Cow position: chrX:31294570-31294476 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 79
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 24-117
Cow position: chrX:6690257-6690164 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 25-115
Cow position: chrX:23562636-23562726 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 77
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 26-117
Cow position: chrX:22915035-22914944 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 79
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 27-119
Cow position: chrX:37665697-37665789 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 35-119
Cow position: chrX:23266429-23266513 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 75
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 120-250
Cow position: chrX:35982088-35981956 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 0