Cow genome map
| Conread name: | Mixn-0003h06 |
| Conread position: | 172-396 |
| Cow position: | chr10:21408579-21408798 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 179-411 |
| Cow position: | chr10:54184880-54184655 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 78, 22 |
| Conread position: | 162-306 |
| Cow position: | chr11:42874273-42874129 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 93, 82 |
| Conread position: | 165-399 |
| Cow position: | chr11:22295982-22296216 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 149, 162 |
| Conread position: | 177-381 |
| Cow position: | chr11:18492112-18492318 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 172, 132 |
| Conread position: | 22-397 |
| Cow position: | chr12:37466767-37466407 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 11 |
| Conread position: | 162-399 |
| Cow position: | chr12:2003790-2003562 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 13 |
| Conread position: | 174-399 |
| Cow position: | chr12:14316954-14316730 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 5, 149 |
| Conread position: | 176-325 |
| Cow position: | chr12:13811470-13811620 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 384-629 |
| Cow position: | chr12:37466189-37465943 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 106 |
| Conread position: | 162-405 |
| Cow position: | chr13:28799522-28799279 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 39, 179 |
| Conread position: | 162-431 |
| Cow position: | chr13:38992181-38992443 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 91, 37 |
| Conread position: | 178-422 |
| Cow position: | chr13:15811983-15812225 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 162-347 |
| Cow position: | chr14:41775232-41775049 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 172-317 |
| Cow position: | chr14:5877957-5878101 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 203-431 |
| Cow position: | chr14:36579403-36579632 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 145, 118 |
| Conread position: | 172-380 |
| Cow position: | chr15:28050932-28051133 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 163 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 172-398 |
| Cow position: | chr15:9790718-9790494 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 172-399 |
| Cow position: | chr15:37063753-37063528 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 82, 43 |
| Conread position: | 178-318 |
| Cow position: | chr15:10823901-10823764 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 161-411 |
| Cow position: | chr16:15909363-15909598 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 162-399 |
| Cow position: | chr16:21403664-21403429 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 195, 165 |
| Conread position: | 162-410 |
| Cow position: | chr17:43454062-43454307 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 20, 78 |
| Conread position: | 162-422 |
| Cow position: | chr18:32646721-32646973 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 163-490 |
| Cow position: | chr18:25252305-25252634 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 29, 41 |
| Conread position: | 210-431 |
| Cow position: | chr18:33204035-33203819 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 237-399 |
| Cow position: | chr18:23144921-23144755 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 110, 79 |
| Conread position: | 162-319 |
| Cow position: | chr19:976462-976618 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 162-398 |
| Cow position: | chr19:25836308-25836541 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 212, 145 |
| Conread position: | 173-418 |
| Cow position: | chr19:46730993-46730764 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 206-398 |
| Cow position: | chr20:3523278-3523461 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 162-332 |
| Cow position: | chr21:13508221-13508063 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 162-411 |
| Cow position: | chr21:37559302-37559545 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 93, 41 |
| Conread position: | 198-399 |
| Cow position: | chr21:43964707-43964906 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 172-416 |
| Cow position: | chr22:33639051-33639289 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 240, 29 |
| Conread position: | 162-416 |
| Cow position: | chr23:5405245-5404988 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 93, 225 |
| Conread position: | 162-435 |
| Cow position: | chr23:14167922-14168196 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 161, 197 |
| Conread position: | 165-416 |
| Cow position: | chr23:10023582-10023345 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 173-411 |
| Cow position: | chr23:37450803-37450569 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 81, 30 |
| Conread position: | 173-432 |
| Cow position: | chr23:37627804-37627545 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 19, 101 |
| Conread position: | 177-415 |
| Cow position: | chr23:16384591-16384824 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 78, 99 |
| Conread position: | 162-432 |
| Cow position: | chr24:20204628-20204897 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 32, 54 |
| Conread position: | 172-416 |
| Cow position: | chr24:32679403-32679166 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 164-411 |
| Cow position: | chr25:24731402-24731160 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 90, 13 |
| Conread position: | 173-420 |
| Cow position: | chr25:20251860-20252090 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 238, 104 |
| Conread position: | 182-397 |
| Cow position: | chr27:29490590-29490377 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 192, 145 |
| Conread position: | 193-433 |
| Cow position: | chr27:935818-936060 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 21, 128 |
| Conread position: | 162-335 |
| Cow position: | chr28:11406161-11406337 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 114, 25 |
| Conread position: | 213-399 |
| Cow position: | chr28:26047651-26047835 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 42, 69 |
| Conread position: | 168-421 |
| Cow position: | chr29:480645-480394 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 89, 21 |
| Conread position: | 168-432 |
| Cow position: | chr29:18590513-18590776 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 86, 116 |
| Conread position: | 165-381 |
| Cow position: | chr8:24699644-24699429 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 132, 23 |
| Conread position: | 165-432 |
| Cow position: | chr8:36955817-36955553 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 158 |
| Conread position: | 157-416 |
| Cow position: | chr9:30759019-30758760 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 8, 57 |
| Conread position: | 172-416 |
| Cow position: | chr9:46492294-46492538 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 91, 148 |
| Conread position: | 173-432 |
| Cow position: | chr9:27383069-27383320 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 238, 35 |
| Conread position: | 167-411 |
| Cow position: | chrX:30732710-30732469 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 88, 147 |