Cow genome map
| Conread name: | Mixn-0012h23 |
| Conread position: | 386-787 |
| Cow position: | chr1:23191878-23191472 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 288 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 40, 158 |
| Conread position: | 561-787 |
| Cow position: | chr13:19288948-19289169 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 164, 55 |
| Conread position: | 566-705 |
| Cow position: | chr13:42280075-42279934 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 10, 61 |
| Conread position: | 514-774 |
| Cow position: | chr15:17340995-17341250 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 238, 25 |
| Conread position: | 529-788 |
| Cow position: | chr15:41327599-41327335 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 90, 8 |
| Conread position: | 351-788 |
| Cow position: | chr16:47790503-47790040 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 7 |
| Conread position: | 521-788 |
| Cow position: | chr19:18060020-18060289 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 57, 12 |
| Conread position: | 351-788 |
| Cow position: | chr2:5300363-5299907 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 7 |
| Conread position: | 351-788 |
| Cow position: | chr2:15347602-15347136 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 215 |
| Conread position: | 341-788 |
| Cow position: | chr20:30395430-30395905 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 309 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 33, 241 |
| Conread position: | 539-788 |
| Cow position: | chr20:22034155-22033914 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 12 |
| Conread position: | 386-787 |
| Cow position: | chr21:26853503-26853098 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 289 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 112, 73 |
| Conread position: | 503-788 |
| Cow position: | chr22:8842364-8842084 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 12, 35 |
| Conread position: | 591-788 |
| Cow position: | chr22:37730881-37730677 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 119, 186 |
| Conread position: | 342-788 |
| Cow position: | chr23:7836234-7836707 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 507-787 |
| Cow position: | chr23:19674205-19673934 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 32, 46 |
| Conread position: | 348-788 |
| Cow position: | chr24:17292813-17293287 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 317 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 21, 168 |
| Conread position: | 591-787 |
| Cow position: | chr24:18378719-18378919 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 8, 27 |
| Conread position: | 579-783 |
| Cow position: | chr25:12073549-12073343 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 44, 86 |
| Conread position: | 386-783 |
| Cow position: | chr26:11267202-11266787 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 288 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 40, 174 |
| Conread position: | 425-785 |
| Cow position: | chr26:1599738-1600117 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 26, 248 |
| Conread position: | 525-788 |
| Cow position: | chr26:34255060-34255324 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 7, 25 |
| Conread position: | 507-702 |
| Cow position: | chr27:26488328-26488524 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 11, 32 |
| Conread position: | 545-779 |
| Cow position: | chr27:15489340-15489116 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 33, 7 |
| Conread position: | 367-779 |
| Cow position: | chr28:17565110-17565548 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 296 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 26, 177 |
| Conread position: | 520-716 |
| Cow position: | chr28:28101372-28101182 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 56, 16 |
| Conread position: | 545-765 |
| Cow position: | chr28:5060122-5060337 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 31, 7 |
| Conread position: | 594-784 |
| Cow position: | chr28:6856034-6855845 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 41, 33 |
| Conread position: | 359-787 |
| Cow position: | chr3:31500415-31500869 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 60 |
| Conread position: | 481-785 |
| Cow position: | chr3:75175378-75175672 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 27, 47 |
| Conread position: | 571-787 |
| Cow position: | chr3:71257241-71257453 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 63, 15 |
| Conread position: | 507-763 |
| Cow position: | chr4:22690213-22689952 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 48 |
| Conread position: | 571-788 |
| Cow position: | chr4:49698588-49698368 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 64, 56 |
| Conread position: | 343-784 |
| Cow position: | chr5:58540501-58540046 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 324 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 11, 89 |
| Conread position: | 493-787 |
| Cow position: | chr6:53859511-53859222 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 23, 46 |
| Conread position: | 497-722 |
| Cow position: | chr6:8930977-8931201 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 21, 40 |
| Conread position: | 509-786 |
| Cow position: | chr6:57303832-57303557 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 9, 30 |
| Conread position: | 551-788 |
| Cow position: | chr6:30344758-30344517 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 25, 67 |
| Conread position: | 548-785 |
| Cow position: | chr7:52566962-52567200 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 28, 66 |
| Conread position: | 525-752 |
| Cow position: | chr8:44014077-44014304 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 30, 8 |
| Conread position: | 569-787 |
| Cow position: | chr8:30229655-30229880 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 88, 58 |
| Conread position: | 510-711 |
| Cow position: | chr9:9720608-9720809 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 75, 27 |
| Conread position: | 550-726 |
| Cow position: | chr9:41002564-41002388 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 28, 72 |
| Conread position: | 561-744 |
| Cow position: | chr9:34948890-34949075 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 57, 110 |
| Conread position: | 507-783 |
| Cow position: | chrX:46447744-46448020 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 204 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 19, 48 |
| Conread position: | 566-752 |
| Cow position: | chrX:4298794-4298979 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 52 |