Cow genome map
| Conread name: | Mixn-0034a11 |
| Conread position: | 165-574 |
| Cow position: | chr10:33973674-33973263 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 278 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 178, 34 |
| Conread position: | 215-574 |
| Cow position: | chr10:30489724-30490100 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 136, 44 |
| Conread position: | 302-574 |
| Cow position: | chr11:37395774-37396040 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 36, 17 |
| Conread position: | 351-575 |
| Cow position: | chr11:46313774-46314000 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 115, 75 |
| Conread position: | 94-296 |
| Cow position: | chr12:4463799-4463595 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 21, 69 |
| Conread position: | 85-574 |
| Cow position: | chr13:44211113-44210633 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 335 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 30, 67 |
| Conread position: | 102-577 |
| Cow position: | chr14:39927009-39927500 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 329 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 27, 75 |
| Conread position: | 168-438 |
| Cow position: | chr14:25069845-25070109 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 39, 121 |
| Conread position: | 184-573 |
| Cow position: | chr14:39468405-39468799 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 32, 107 |
| Conread position: | 120-454 |
| Cow position: | chr15:26420663-26421017 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 53, 307 |
| Conread position: | 93-532 |
| Cow position: | chr16:52583650-52584088 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 295 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 31, 17 |
| Conread position: | 348-567 |
| Cow position: | chr16:53247624-53247836 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 32, 40 |
| Conread position: | 104-327 |
| Cow position: | chr17:43467593-43467819 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 21, 33 |
| Conread position: | 356-574 |
| Cow position: | chr17:35920211-35919983 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 78, 12 |
| Conread position: | 364-574 |
| Cow position: | chr17:29188394-29188183 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 54, 79 |
| Conread position: | 193-573 |
| Cow position: | chr18:24518701-24519076 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 14, 70 |
| Conread position: | 352-571 |
| Cow position: | chr18:45794544-45794319 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 112-574 |
| Cow position: | chr19:21263089-21262644 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 320 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 14, 75 |
| Conread position: | 93-439 |
| Cow position: | chr20:13402448-13402796 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 22, 76 |
| Conread position: | 103-572 |
| Cow position: | chr20:2161122-2160666 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 321 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 24, 144 |
| Conread position: | 136-578 |
| Cow position: | chr20:24114700-24114256 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 309 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 42, 32 |
| Conread position: | 174-529 |
| Cow position: | chr21:14921840-14922179 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 117 |
| Conread position: | 354-573 |
| Cow position: | chr21:29453116-29453347 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 364-573 |
| Cow position: | chr21:23885871-23885650 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 53, 179 |
| Conread position: | 99-285 |
| Cow position: | chr22:15170132-15170317 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 27, 49 |
| Conread position: | 114-426 |
| Cow position: | chr22:10013479-10013778 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 13, 55 |
| Conread position: | 104-574 |
| Cow position: | chr24:38328857-38329318 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 325 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 11, 89 |
| Conread position: | 127-573 |
| Cow position: | chr24:20152253-20151828 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 287 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 80, 41 |
| Conread position: | 143-354 |
| Cow position: | chr25:30548347-30548557 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 64, 25 |
| Conread position: | 113-574 |
| Cow position: | chr28:7992247-7991774 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 329 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 15, 178 |
| Conread position: | 96-291 |
| Cow position: | chr29:6905458-6905656 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 19, 143 |
| Conread position: | 2-572 |
| Cow position: | chr4:37618055-37618619 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 84 |
| Conread position: | 127-558 |
| Cow position: | chr5:39426830-39427271 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 296 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 63, 34 |
| Conread position: | 344-574 |
| Cow position: | chr5:62141266-62141043 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 63, 56 |
| Conread position: | 94-435 |
| Cow position: | chr6:5126910-5127252 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 23, 76 |
| Conread position: | 98-574 |
| Cow position: | chr7:44565650-44565148 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 334 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 17, 72 |
| Conread position: | 112-353 |
| Cow position: | chr8:6047112-6046872 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 16, 58 |
| Conread position: | 180-574 |
| Cow position: | chr8:32981870-32982254 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 269 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 27, 90 |
| Conread position: | 91-574 |
| Cow position: | chrX:25285289-25284799 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 334 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 7, 113 |
| Conread position: | 93-427 |
| Cow position: | chrX:20628881-20629212 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 20, 208 |
| Conread position: | 93-574 |
| Cow position: | chrX:42208929-42209418 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 324 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 23, 33 |
| Conread position: | 96-327 |
| Cow position: | chrX:23083710-23083937 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 18, 10 |
| Conread position: | 331-574 |
| Cow position: | chrX:32872636-32872382 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 109, 116 |