Cow genome map

Conread name: Mixn-0034h05

Conread position: 625-761
Cow position: chr1:32350837-32350709 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 629-752
Cow position: chr1:102531777-102531900 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 630-748
Cow position: chr1:92612297-92612413 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 630-761
Cow position: chr1:87946831-87946700 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 111
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 631-754
Cow position: chr1:79626969-79626851 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 631-761
Cow position: chr1:95425962-95425839 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 632-761
Cow position: chr1:4044641-4044769 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 635-754
Cow position: chr1:100754091-100753971 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 641-767
Cow position: chr1:98246124-98246246 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 101, 75

Conread position: 653-752
Cow position: chr1:12040416-12040515 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 631-753
Cow position: chr10:32105437-32105559 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 641-754
Cow position: chr10:36315730-36315841 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 627-761
Cow position: chr11:65957087-65957216 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 630-756
Cow position: chr11:32815756-32815881 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 631-754
Cow position: chr11:62580440-62580317 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 631-761
Cow position: chr11:62582055-62582185 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 631-761
Cow position: chr12:17709780-17709901 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 631-754
Cow position: chr13:50639404-50639525 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 631-767
Cow position: chr13:39509520-39509380 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 55, 40

Conread position: 623-754
Cow position: chr14:5330813-5330683 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 17

Conread position: 620-718
Cow position: chr15:38863995-38863897 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 630-752
Cow position: chr15:695033-695155 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 106
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 630-761
Cow position: chr15:29531718-29531851 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 90, 20

Conread position: 631-755
Cow position: chr15:42639823-42639700 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 631-756
Cow position: chr15:20550402-20550527 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 631-761
Cow position: chr15:29929787-29929648 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 633-754
Cow position: chr15:35858298-35858415 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 641-767
Cow position: chr15:4312323-4312200 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 623-761
Cow position: chr16:48940433-48940580 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 630-755
Cow position: chr16:34136178-34136302 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 631-754
Cow position: chr16:54479244-54479366 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 99, 0

Conread position: 631-761
Cow position: chr16:19464064-19463933 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 633-749
Cow position: chr16:9521693-9521809 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 639-728
Cow position: chr16:33693501-33693589 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 78
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 630-763
Cow position: chr17:13723592-13723460 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 128, 0

Conread position: 631-754
Cow position: chr17:4787196-4787316 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 631-754
Cow position: chr17:37371861-37371738 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 631-761
Cow position: chr17:25491784-25491914 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 44, 94

Conread position: 633-754
Cow position: chr17:3356986-3357108 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 634-761
Cow position: chr18:25131955-25132082 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 630-746
Cow position: chr19:5346392-5346276 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 631-754
Cow position: chr19:10135868-10135991 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 107
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 634-754
Cow position: chr19:22463902-22463783 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 35

Conread position: 628-754
Cow position: chr2:67248191-67248065 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 631-754
Cow position: chr2:41128799-41128676 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 631-754
Cow position: chr2:46220639-46220762 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 631-761
Cow position: chr2:55871987-55872117 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 632-728
Cow position: chr2:46297191-46297095 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 632-761
Cow position: chr2:42655416-42655540 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 628-753
Cow position: chr20:28836183-28836307 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 631-754
Cow position: chr20:7161383-7161266 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 631-761
Cow position: chr20:39688433-39688306 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 113, 67

Conread position: 208-754
Cow position: chr21:7690830-7691384 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 36

Conread position: 627-754
Cow position: chr21:13812070-13812194 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 631-761
Cow position: chr22:6760499-6760369 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 108
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 631-761
Cow position: chr22:7886557-7886686 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 633-754
Cow position: chr22:6681236-6681357 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 633-761
Cow position: chr22:27706129-27706255 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 109, 0

Conread position: 633-766
Cow position: chr22:1635746-1635880 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 630-761
Cow position: chr23:31627796-31627665 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 114
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 660-755
Cow position: chr23:14139566-14139471 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 630-761
Cow position: chr24:16505405-16505274 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 57

Conread position: 631-754
Cow position: chr25:36054377-36054499 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 631-753
Cow position: chr26:29849295-29849417 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 631-761
Cow position: chr26:28241665-28241794 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 108
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 64, 0

Conread position: 631-761
Cow position: chr26:34663118-34663248 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 633-761
Cow position: chr26:13079261-13079134 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 37

Conread position: 636-749
Cow position: chr27:25033179-25033066 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 100
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 628-767
Cow position: chr28:4216883-4217016 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 122, 42

Conread position: 631-733
Cow position: chr28:5218674-5218776 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 634-740
Cow position: chr28:732554-732658 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 635-718
Cow position: chr28:8579110-8579027 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 74
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 622-754
Cow position: chr29:1500008-1499877 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 628-754
Cow position: chr29:890615-890741 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 630-751
Cow position: chr29:17613380-17613494 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 631-752
Cow position: chr29:915805-915924 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 103
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 628-755
Cow position: chr3:29084423-29084296 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 107
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 630-752
Cow position: chr3:66133177-66133299 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 114, 82

Conread position: 630-754
Cow position: chr3:59559789-59559913 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 108
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 631-718
Cow position: chr3:39964072-39963985 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 631-718
Cow position: chr3:47696258-47696170 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 79
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 631-755
Cow position: chr3:39155638-39155514 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 631-761
Cow position: chr3:58244972-58244842 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 628-761
Cow position: chr4:48956130-48955995 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 631-761
Cow position: chr5:23758796-23758665 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 630-751
Cow position: chr6:30505250-30505131 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 631-718
Cow position: chr6:14916842-14916756 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 79
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 631-719
Cow position: chr6:418624-418712 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 78
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 631-752
Cow position: chr7:61700300-61700420 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 631-761
Cow position: chr7:20256834-20256702 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 109
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 633-761
Cow position: chr7:53487296-53487166 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 631-718
Cow position: chr8:43013688-43013601 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 78
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 631-751
Cow position: chr8:8381441-8381559 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 631-761
Cow position: chr8:829913-830042 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 631-761
Cow position: chr8:27361369-27361245 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 600-761
Cow position: chr9:8874884-8874722 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 133
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 8, 22

Conread position: 620-754
Cow position: chr9:34887153-34887286 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 630-753
Cow position: chr9:3880020-3879897 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 630-761
Cow position: chr9:53498144-53498281 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 635-761
Cow position: chr9:54499109-54499236 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 641-752
Cow position: chr9:1926197-1926086 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0