Cow genome map
| Conread name: | OvF2-UMC-p2mm1-002-h06 |
| Conread position: | 13-309 |
| Cow position: | chr1:84251855-84251559 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 17, 187 |
| Conread position: | 17-364 |
| Cow position: | chr1:80999773-80999421 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 16, 33 |
| Conread position: | 13-366 |
| Cow position: | chr10:29768745-29768374 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 50, 37 |
| Conread position: | 28-317 |
| Cow position: | chr10:28460584-28460884 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 55-366 |
| Cow position: | chr10:55184577-55184900 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 179, 12 |
| Conread position: | 16-232 |
| Cow position: | chr11:20835254-20835470 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-317 |
| Cow position: | chr11:80889642-80889346 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 14, 32 |
| Conread position: | 50-315 |
| Cow position: | chr11:27805942-27805678 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 61-317 |
| Cow position: | chr12:11053272-11053008 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 97, 37 |
| Conread position: | 17-196 |
| Cow position: | chr13:4208543-4208719 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 13-366 |
| Cow position: | chr14:41096025-41095661 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 17, 35 |
| Conread position: | 15-196 |
| Cow position: | chr14:14419818-14419640 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 108, 58 |
| Conread position: | 17-368 |
| Cow position: | chr14:43514482-43514834 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 145, 247 |
| Conread position: | 19-366 |
| Cow position: | chr14:14242206-14241838 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 63, 54 |
| Conread position: | 15-240 |
| Cow position: | chr15:20380354-20380129 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 59-290 |
| Cow position: | chr15:13870446-13870677 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 103, 62 |
| Conread position: | 15-209 |
| Cow position: | chr16:23990778-23990585 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 13-318 |
| Cow position: | chr17:836252-835950 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 254, 21 |
| Conread position: | 16-195 |
| Cow position: | chr17:1557930-1557751 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-218 |
| Cow position: | chr18:14049159-14049362 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 16-317 |
| Cow position: | chr18:23872996-23873295 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 15, 71 |
| Conread position: | 16-368 |
| Cow position: | chr18:24307164-24306818 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 36, 51 |
| Conread position: | 16-262 |
| Cow position: | chr19:39408198-39407955 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 45, 58 |
| Conread position: | 41-316 |
| Cow position: | chr19:47013385-47013105 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 57, 150 |
| Conread position: | 59-368 |
| Cow position: | chr19:7590295-7590608 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 186, 230 |
| Conread position: | 16-267 |
| Cow position: | chr2:38163979-38163726 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 191 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 14, 27 |
| Conread position: | 16-316 |
| Cow position: | chr2:39226585-39226890 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 226, 127 |
| Conread position: | 15-195 |
| Cow position: | chr20:13048666-13048486 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-269 |
| Cow position: | chr22:37730601-37730868 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 160, 97 |
| Conread position: | 16-315 |
| Cow position: | chr22:23344153-23343851 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 240, 43 |
| Conread position: | 94-268 |
| Cow position: | chr22:18335045-18334870 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 15-240 |
| Cow position: | chr26:27546772-27546999 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 13-249 |
| Cow position: | chr27:6374773-6374538 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 128, 95 |
| Conread position: | 55-368 |
| Cow position: | chr3:39608409-39608105 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 208, 12 |
| Conread position: | 15-197 |
| Cow position: | chr4:11671154-11671335 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 35, 12 |
| Conread position: | 15-204 |
| Cow position: | chr4:46477237-46477049 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 12, 24 |
| Conread position: | 16-310 |
| Cow position: | chr5:72363608-72363309 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 178, 164 |
| Conread position: | 16-368 |
| Cow position: | chr5:15617811-15618178 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 183, 39 |
| Conread position: | 28-316 |
| Cow position: | chr6:58707569-58707267 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 16-313 |
| Cow position: | chr7:5188711-5188408 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 177 |
| Conread position: | 29-317 |
| Cow position: | chr7:26493405-26493119 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 175, 44 |
| Conread position: | 13-261 |
| Cow position: | chr9:22827415-22827159 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 21, 173 |
| Conread position: | 15-262 |
| Cow position: | chrX:2374356-2374600 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 144, 94 |