Cow genome map

Conread name: OvF2-UMC-p2mm4-011-b08

Conread position: 112-226
Cow position: chr1:48166785-48166899 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 58, 41

Conread position: 112-234
Cow position: chr1:26788099-26787976 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 108, 0

Conread position: 112-204
Cow position: chr10:1788844-1788752 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 78
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 112-226
Cow position: chr10:29323305-29323419 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 98
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 112-232
Cow position: chr10:58655352-58655476 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 116-229
Cow position: chr10:14386142-14386028 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 120-238
Cow position: chr10:61436032-61436147 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 91

Conread position: 107-223
Cow position: chr12:48470296-48470412 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 108-226
Cow position: chr12:4197592-4197475 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 61, 90

Conread position: 112-223
Cow position: chr12:6466956-6467067 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 112-223
Cow position: chr12:25049516-25049405 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 54, 62

Conread position: 116-226
Cow position: chr12:4487775-4487665 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 105, 79

Conread position: 120-221
Cow position: chr12:46033263-46033365 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 112-233
Cow position: chr13:25286985-25287106 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 118-252
Cow position: chr13:52402141-52402274 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 116, 107

Conread position: 114-235
Cow position: chr14:12969258-12969137 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 119-239
Cow position: chr14:16521130-16521010 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 102

Conread position: 108-242
Cow position: chr15:42560344-42560211 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 113
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 123, 0

Conread position: 112-223
Cow position: chr15:39248350-39248461 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 112-246
Cow position: chr15:24903273-24903408 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 112-223
Cow position: chr16:50119650-50119762 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 112-227
Cow position: chr16:48002891-48003008 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 112-237
Cow position: chr16:26918241-26918365 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 107

Conread position: 116-223
Cow position: chr16:51080418-51080310 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 125-232
Cow position: chr16:33848021-33848129 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 112-220
Cow position: chr17:4609427-4609320 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 116-229
Cow position: chr17:42808344-42808230 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 128-233
Cow position: chr17:21572602-21572708 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 112-223
Cow position: chr18:15611044-15610933 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 60, 9

Conread position: 114-226
Cow position: chr19:53750803-53750915 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 116-232
Cow position: chr19:20084026-20083908 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 121-227
Cow position: chr19:20036255-20036150 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 125-226
Cow position: chr19:45597924-45598026 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 108-249
Cow position: chr2:46567420-46567280 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 73

Conread position: 112-224
Cow position: chr2:52868365-52868479 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 101, 40

Conread position: 112-225
Cow position: chr2:34014996-34014882 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 112-234
Cow position: chr2:45007197-45007075 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 112-235
Cow position: chr2:25427017-25426891 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 113-233
Cow position: chr2:79963973-79963853 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 39, 102

Conread position: 116-209
Cow position: chr2:61830443-61830349 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 108-223
Cow position: chr20:4001142-4001026 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 112-240
Cow position: chr20:8498449-8498573 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 54, 84

Conread position: 112-223
Cow position: chr23:9515145-9515034 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 112-223
Cow position: chr23:9617879-9617990 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 116-235
Cow position: chr23:31610753-31610634 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 120-231
Cow position: chr23:26598692-26598584 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 86

Conread position: 112-228
Cow position: chr24:16627584-16627468 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 103

Conread position: 113-223
Cow position: chr24:6179565-6179456 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 112-238
Cow position: chr25:27499982-27499855 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 109, 0

Conread position: 118-226
Cow position: chr25:8542423-8542535 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 122-233
Cow position: chr25:28667763-28667652 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 50, 64

Conread position: 112-212
Cow position: chr26:29853412-29853512 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 112-221
Cow position: chr26:26975759-26975651 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 116-226
Cow position: chr26:22774576-22774687 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 84

Conread position: 108-223
Cow position: chr27:11381358-11381243 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 112-224
Cow position: chr27:23047837-23047724 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 113-228
Cow position: chr27:15088733-15088849 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 119-223
Cow position: chr27:22442876-22442773 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 103-239
Cow position: chr28:32226363-32226225 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 112-234
Cow position: chr28:34761975-34762099 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 1-112
Cow position: chr29:37987528-37987638 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 57, 32

Conread position: 112-227
Cow position: chr29:4244023-4243907 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 112-228
Cow position: chr3:31406812-31406927 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 113-223
Cow position: chr3:75115365-75115255 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 96
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 120-238
Cow position: chr3:69228913-69228795 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 114, 60

Conread position: 112-226
Cow position: chr4:43705073-43704959 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 112-233
Cow position: chr4:27439825-27439947 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 118-239
Cow position: chr4:19677707-19677829 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 120-232
Cow position: chr4:44411732-44411622 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 112-222
Cow position: chr5:3660128-3660238 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 112-233
Cow position: chr5:22201500-22201378 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 112-241
Cow position: chr5:76393451-76393581 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 121-223
Cow position: chr5:6968450-6968345 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 122-258
Cow position: chr5:46817872-46817738 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 107, 63

Conread position: 123-227
Cow position: chr5:7586642-7586746 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 112-226
Cow position: chr6:58697308-58697193 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 112-299
Cow position: chr6:15638723-15638531 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 60, 154

Conread position: 113-227
Cow position: chr6:42716627-42716742 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 114-230
Cow position: chr6:50787039-50787155 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 117-223
Cow position: chr6:50312343-50312450 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 112-218
Cow position: chr7:65901087-65900983 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 113-223
Cow position: chr7:22491217-22491107 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 118-227
Cow position: chr7:34618617-34618508 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 34, 97

Conread position: 107-228
Cow position: chr8:49320764-49320643 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 45, 108

Conread position: 115-223
Cow position: chr8:51943436-51943544 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 112-223
Cow position: chr9:39181263-39181152 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 97
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 112-226
Cow position: chrX:36875786-36875896 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 58, 41

Conread position: 116-281
Cow position: chrX:34705534-34705370 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 7

Conread position: 120-243
Cow position: chrX:25951609-25951734 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 0