Cow genome map
| Conread name: | OvF4-UMC-p4mm3-018-a01 |
| Conread position: | 203-332 |
| Cow position: | chr1:29975841-29975713 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 62, 16 |
| Conread position: | 203-332 |
| Cow position: | chr1:92048591-92048721 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 88 |
| Conread position: | 203-332 |
| Cow position: | chr10:5264426-5264556 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 58, 16 |
| Conread position: | 203-332 |
| Cow position: | chr10:69250254-69250384 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 58, 42 |
| Conread position: | 206-332 |
| Cow position: | chr10:734754-734626 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 59, 80 |
| Conread position: | 207-330 |
| Cow position: | chr10:39314438-39314567 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 58, 117 |
| Conread position: | 203-332 |
| Cow position: | chr11:36182419-36182550 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 203-330 |
| Cow position: | chr13:32316906-32316777 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 59, 83 |
| Conread position: | 203-331 |
| Cow position: | chr13:44202225-44202097 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 69, 61 |
| Conread position: | 221-329 |
| Cow position: | chr13:6894312-6894202 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 203-331 |
| Cow position: | chr14:6984674-6984802 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 62, 16 |
| Conread position: | 226-332 |
| Cow position: | chr15:22886866-22886759 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 39, 64 |
| Conread position: | 203-332 |
| Cow position: | chr16:7427117-7426983 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 57, 102 |
| Conread position: | 205-332 |
| Cow position: | chr16:8280038-8279905 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 203-332 |
| Cow position: | chr17:5041886-5041755 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 37 |
| Conread position: | 203-310 |
| Cow position: | chr18:25003160-25003051 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 22, 94 |
| Conread position: | 203-331 |
| Cow position: | chr18:36346341-36346212 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 59, 90 |
| Conread position: | 203-332 |
| Cow position: | chr18:42747313-42747442 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 109, 16 |
| Conread position: | 207-332 |
| Cow position: | chr18:23808152-23808025 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 222-331 |
| Cow position: | chr18:28794641-28794751 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 71 |
| Conread position: | 203-330 |
| Cow position: | chr19:55236231-55236358 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 62, 88 |
| Conread position: | 2-147 |
| Cow position: | chr2:15179360-15179504 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 78, 10 |
| Conread position: | 2-330 |
| Cow position: | chr2:15162055-15162389 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 10 |
| Conread position: | 171-332 |
| Cow position: | chr2:62501603-62501439 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 33, 105 |
| Conread position: | 203-332 |
| Cow position: | chr2:74209573-74209445 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 61, 16 |
| Conread position: | 207-331 |
| Cow position: | chr2:39376106-39376229 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 55, 20 |
| Conread position: | 203-332 |
| Cow position: | chr20:33363312-33363441 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 61, 84 |
| Conread position: | 219-330 |
| Cow position: | chr21:32928834-32928722 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 72, 46 |
| Conread position: | 203-331 |
| Cow position: | chr22:44835388-44835522 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 203-332 |
| Cow position: | chr22:39601020-39601148 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 88, 16 |
| Conread position: | 203-332 |
| Cow position: | chr24:29063921-29063791 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 90 |
| Conread position: | 198-332 |
| Cow position: | chr25:16578778-16578643 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 63, 89 |
| Conread position: | 172-332 |
| Cow position: | chr26:10813949-10814107 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 93, 47 |
| Conread position: | 222-332 |
| Cow position: | chr26:31794554-31794670 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 203-330 |
| Cow position: | chr27:26161703-26161574 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 25, 7 |
| Conread position: | 203-332 |
| Cow position: | chr27:26625334-26625201 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 205-332 |
| Cow position: | chr27:19685509-19685636 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 59, 88 |
| Conread position: | 221-332 |
| Cow position: | chr27:28685331-28685218 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 41, 65 |
| Conread position: | 198-332 |
| Cow position: | chr29:34700073-34699938 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 7, 72 |
| Conread position: | 203-332 |
| Cow position: | chr29:356074-356205 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 203-330 |
| Cow position: | chr3:33633160-33633033 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 58, 5 |
| Conread position: | 203-332 |
| Cow position: | chr3:3096621-3096491 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 59, 90 |
| Conread position: | 203-332 |
| Cow position: | chr3:10215285-10215155 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 59, 90 |
| Conread position: | 203-332 |
| Cow position: | chr3:52722271-52722142 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 67, 36 |
| Conread position: | 203-332 |
| Cow position: | chr4:8692418-8692287 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 62, 99 |
| Conread position: | 203-332 |
| Cow position: | chr4:33971155-33971024 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 25, 109 |
| Conread position: | 204-332 |
| Cow position: | chr4:48283835-48283964 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 205-332 |
| Cow position: | chr4:18439829-18439696 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 203-332 |
| Cow position: | chr5:41636648-41636777 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 62, 16 |
| Conread position: | 204-332 |
| Cow position: | chr5:33467265-33467136 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 97 |
| Conread position: | 206-332 |
| Cow position: | chr5:41229490-41229618 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 186-332 |
| Cow position: | chr6:6098510-6098363 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 203-332 |
| Cow position: | chr6:22804578-22804443 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 219-330 |
| Cow position: | chr6:39158154-39158041 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 202-332 |
| Cow position: | chr8:6021875-6021744 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 63, 17 |
| Conread position: | 203-332 |
| Cow position: | chr8:3147778-3147653 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 88, 16 |
| Conread position: | 203-332 |
| Cow position: | chr8:36364288-36364158 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 62, 75 |
| Conread position: | 203-332 |
| Cow position: | chr8:42139282-42139154 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 64, 25 |
| Conread position: | 203-332 |
| Cow position: | chr9:41782175-41782044 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 205-332 |
| Cow position: | chr9:35369158-35369025 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 211-332 |
| Cow position: | chr9:20839886-20839763 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 220-332 |
| Cow position: | chr9:10678466-10678353 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 202-332 |
| Cow position: | chrX:28993154-28993023 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 62, 91 |
| Conread position: | 207-332 |
| Cow position: | chrX:20653175-20653307 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 0 |