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Cow genome map

           
Conread name:
           
OvF8-UMC-p8mm4-001-g10
        

               
Conread position:
               
1-205
               

               
Cow position:
               
chr1:41277390-41277176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr1:6519613-6519869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr1:23063166-23063435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr1:53593514-53593784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
3-363
               

               
Cow position:
               
chr1:11331683-11331305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
4-251
               

               
Cow position:
               
chr1:83105600-83105865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
21, 62
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr1:22455957-22456279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
16, 163
               

               
Conread position:
               
5-364
               

               
Cow position:
               
chr1:31272033-31271649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
20, 165
               

               
Conread position:
               
9-364
               

               
Cow position:
               
chr1:45209358-45209745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
17, 375
               

               
Conread position:
               
11-284
               

               
Cow position:
               
chr1:79100089-79099805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
68, 201
               

               
Conread position:
               
22-331
               

               
Cow position:
               
chr1:31906964-31907294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
93, 46
               

               
Conread position:
               
40-368
               

               
Cow position:
               
chr1:64331429-64331771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 326
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr10:26692346-26692554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr10:51724727-51724394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 236
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr10:23865908-23865535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
174, 94
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr10:33344353-33344741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
24, 200
               

               
Conread position:
               
4-252
               

               
Cow position:
               
chr10:9608603-9608337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 203
               

               
Conread position:
               
6-363
               

               
Cow position:
               
chr10:14902108-14902480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
67, 200
               

               
Conread position:
               
8-250
               

               
Cow position:
               
chr10:30612570-30612820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
8-342
               

               
Cow position:
               
chr10:22979996-22979659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
17, 168
               

               
Conread position:
               
12-305
               

               
Cow position:
               
chr10:40264524-40264833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
100, 12
               

               
Conread position:
               
19-351
               

               
Cow position:
               
chr10:7501031-7501388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 13
               

               
Conread position:
               
24-362
               

               
Cow position:
               
chr10:59657560-59657195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
32-363
               

               
Cow position:
               
chr10:56736229-56736588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
43, 23
               

               
Conread position:
               
58-367
               

               
Cow position:
               
chr10:61134080-61134420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
53, 268
               

               
Conread position:
               
99-340
               

               
Cow position:
               
chr10:44720888-44721137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
72, 7
               

               
Conread position:
               
115-260
               

               
Cow position:
               
chr10:34391906-34391761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
139, 53
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr11:77192943-77192575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
78, 25
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr11:57012061-57012445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
24, 120
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr11:25776642-25776251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
24, 71
               

               
Conread position:
               
1-365
               

               
Cow position:
               
chr11:68664416-68664798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
105, 67
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr11:54645059-54645349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 108
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr11:39529982-39530268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 62
               

               
Conread position:
               
5-251
               

               
Cow position:
               
chr11:46027896-46028154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
17, 36
               

               
Conread position:
               
5-356
               

               
Cow position:
               
chr11:75941135-75941501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 25
               

               
Conread position:
               
109-362
               

               
Cow position:
               
chr11:43590190-43589923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 55
               

               
Conread position:
               
6-247
               

               
Cow position:
               
chr12:11689492-11689237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
8-284
               

               
Cow position:
               
chr12:30136084-30136378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 247
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr13:41279436-41279702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
24, 215
               

               
Conread position:
               
19-342
               

               
Cow position:
               
chr13:33584631-33584976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
47, 131
               

               
Conread position:
               
46-306
               

               
Cow position:
               
chr13:37584880-37585160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 165
               

               
Conread position:
               
46-339
               

               
Cow position:
               
chr13:34108458-34108767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
66, 24
               

               
Conread position:
               
125-287
               

               
Cow position:
               
chr13:49257645-49257822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr14:40736218-40736598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
22, 165
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr15:25660843-25660574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 52
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr15:44460402-44460657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
77, 35
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr15:5472993-5473354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
22, 345
               

               
Conread position:
               
10-251
               

               
Cow position:
               
chr15:30800448-30800707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
22-322
               

               
Cow position:
               
chr15:24408211-24407896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
21, 137
               

               
Conread position:
               
24-252
               

               
Cow position:
               
chr15:43640662-43640904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr16:15309040-15309300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
16, 56
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr16:15667436-15667781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
25, 316
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr16:17422171-17421781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr16:38518162-38517787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 181
               

               
Conread position:
               
3-283
               

               
Cow position:
               
chr16:29979376-29979091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 187
               

               
Conread position:
               
13-247
               

               
Cow position:
               
chr16:2202717-2202966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
41-363
               

               
Cow position:
               
chr16:20848666-20849007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
36, 105
               

               
Conread position:
               
77-367
               

               
Cow position:
               
chr16:54704621-54704914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
33, 169
               

               
Conread position:
               
7-244
               

               
Cow position:
               
chr17:38364826-38365072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 58
               

               
Conread position:
               
19-305
               

               
Cow position:
               
chr17:31948925-31948612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
32-254
               

               
Cow position:
               
chr17:13202848-13203074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
45, 80
               

               
Conread position:
               
35-344
               

               
Cow position:
               
chr17:31852572-31852901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
40-252
               

               
Cow position:
               
chr17:12110432-12110216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
37, 43
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr18:17153304-17153506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 93
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr18:34210396-34210008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
24, 144
               

               
Conread position:
               
3-288
               

               
Cow position:
               
chr18:50109364-50109074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 243
               

               
Conread position:
               
4-236
               

               
Cow position:
               
chr18:53019197-53018948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
21, 229
               

               
Conread position:
               
34-363
               

               
Cow position:
               
chr18:24392821-24392474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
10, 15
               

               
Conread position:
               
99-344
               

               
Cow position:
               
chr18:14666166-14666421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
17, 207
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr19:38439591-38439921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
24, 57
               

               
Conread position:
               
4-230
               

               
Cow position:
               
chr19:25272056-25272297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
30, 50
               

               
Conread position:
               
14-364
               

               
Cow position:
               
chr19:1655022-1655390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 88
               

               
Conread position:
               
75-364
               

               
Cow position:
               
chr19:5772109-5772413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 148
               

               
Conread position:
               
115-285
               

               
Cow position:
               
chr19:30722036-30721858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
60, 164
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr2:80426233-80426509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr2:5725363-5725058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr2:7428091-7427710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
18, 71
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr2:43741279-43740980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
4-362
               

               
Cow position:
               
chr2:14435606-14435991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 76
               

               
Conread position:
               
26-363
               

               
Cow position:
               
chr2:44439720-44439370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
84, 216
               

               
Conread position:
               
32-359
               

               
Cow position:
               
chr2:32928949-32928597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
32-371
               

               
Cow position:
               
chr2:73354768-73355131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 144
               

               
Conread position:
               
40-363
               

               
Cow position:
               
chr2:11013476-11013817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 127
               

               
Conread position:
               
45-279
               

               
Cow position:
               
chr2:77066844-77067100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
73-364
               

               
Cow position:
               
chr2:76812317-76812625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 257
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr20:2302361-2302700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
24, 87
               

               
Conread position:
               
36-306
               

               
Cow position:
               
chr21:4136695-4136410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 145
               

               
Conread position:
               
40-365
               

               
Cow position:
               
chr21:34337296-34337629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 72
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr22:37996589-37996323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
24, 204
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr22:12446137-12446402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
73, 145
               

               
Conread position:
               
4-322
               

               
Cow position:
               
chr22:11352879-11352532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
19-251
               

               
Cow position:
               
chr22:9119402-9119645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
21-252
               

               
Cow position:
               
chr22:32005354-32005116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
54, 31
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr23:9131253-9130942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
24, 71
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr23:17369610-17369937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
24, 168
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr23:21953562-21953182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
52, 64
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr23:31646633-31646249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
24, 62
               

               
Conread position:
               
4-259
               

               
Cow position:
               
chr23:28743428-28743698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
115-251
               

               
Cow position:
               
chr23:5151379-5151522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr25:32497626-32497986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
23, 142
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr25:21277630-21278015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
24, 73
               

               
Conread position:
               
5-231
               

               
Cow position:
               
chr25:35055380-35055623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
47, 151
               

               
Conread position:
               
5-284
               

               
Cow position:
               
chr25:5288976-5288682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 29
               

               
Conread position:
               
10-342
               

               
Cow position:
               
chr25:20597679-20598034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 161
               

               
Conread position:
               
12-342
               

               
Cow position:
               
chr25:19142878-19142522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr26:17688574-17688313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr26:15088399-15088132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr26:25038313-25038639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 305
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr26:585083-584713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
24, 71
               

               
Conread position:
               
17-351
               

               
Cow position:
               
chr26:14143752-14143405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 154
               

               
Conread position:
               
25-364
               

               
Cow position:
               
chr26:23095782-23096140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
52, 118
               

               
Conread position:
               
29-304
               

               
Cow position:
               
chr26:13546258-13545959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 179
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr27:28993712-28993407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
5-196
               

               
Cow position:
               
chr27:16117436-16117231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
20-363
               

               
Cow position:
               
chr27:21259832-21259469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
91, 187
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr28:30262641-30262424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
24, 39
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr28:22466115-22465737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
50, 320
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr28:33956730-33956367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 140
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr28:28874691-28874310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
14-351
               

               
Cow position:
               
chr28:28039493-28039852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
65, 54
               

               
Conread position:
               
25-250
               

               
Cow position:
               
chr28:616867-617102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
20, 38
               

               
Conread position:
               
3-351
               

               
Cow position:
               
chr29:3663650-3664025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
4-310
               

               
Cow position:
               
chr29:37270826-37270506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 63
               

               
Conread position:
               
10-252
               

               
Cow position:
               
chr29:8414862-8414612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
69, 131
               

               
Conread position:
               
36-252
               

               
Cow position:
               
chr29:27305858-27306084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
134-365
               

               
Cow position:
               
chr29:4481841-4482084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 100
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr3:25011145-25011402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 46
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr3:43483441-43483706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
4-351
               

               
Cow position:
               
chr3:82532864-82533235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
21-251
               

               
Cow position:
               
chr3:72536998-72537222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
56, 17
               

               
Conread position:
               
32-361
               

               
Cow position:
               
chr3:23751259-23751615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 282
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr4:11870062-11869838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr4:18117464-18117068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
22, 56
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr4:41594090-41594475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
110, 63
               

               
Conread position:
               
4-248
               

               
Cow position:
               
chr4:11499236-11499479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
70, 108
               

               
Conread position:
               
5-252
               

               
Cow position:
               
chr4:48542227-48541965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
20, 99
               

               
Conread position:
               
5-355
               

               
Cow position:
               
chr4:47288274-47288653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 139
               

               
Conread position:
               
8-251
               

               
Cow position:
               
chr4:35316598-35316847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
17, 77
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr5:57791501-57791205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 61
               

               
Conread position:
               
2-309
               

               
Cow position:
               
chr5:58526459-58526141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
61, 280
               

               
Conread position:
               
3-342
               

               
Cow position:
               
chr5:41263038-41262698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 109
               

               
Conread position:
               
4-250
               

               
Cow position:
               
chr5:66983022-66983282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
21, 90
               

               
Conread position:
               
4-252
               

               
Cow position:
               
chr5:37715055-37714795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 156
               

               
Conread position:
               
40-341
               

               
Cow position:
               
chr5:64797360-64797682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
40-363
               

               
Cow position:
               
chr5:21550311-21549962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
78-304
               

               
Cow position:
               
chr5:53630550-53630793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
29, 148
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr6:63483869-63484083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
25, 40
               

               
Conread position:
               
6-284
               

               
Cow position:
               
chr6:9390793-9391085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
19, 250
               

               
Conread position:
               
11-252
               

               
Cow position:
               
chr6:20094008-20093756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
12, 236
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr7:20177675-20177417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
52, 18
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr7:57038428-57038061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 92
               

               
Conread position:
               
33-251
               

               
Cow position:
               
chr7:12709052-12709287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
44, 167
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr8:31559742-31560052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
70, 259
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr8:6097015-6096638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
22, 102
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr8:47182846-47182466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
24, 205
               

               
Conread position:
               
6-310
               

               
Cow position:
               
chr8:31312727-31312418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
17, 101
               

               
Conread position:
               
19-251
               

               
Cow position:
               
chr8:29302080-29301840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
37, 44
               

               
Conread position:
               
24-251
               

               
Cow position:
               
chr8:8272432-8272183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
78-350
               

               
Cow position:
               
chr8:38488821-38489116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
34, 124
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr9:49504595-49504296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
15, 150
               

               
Conread position:
               
4-254
               

               
Cow position:
               
chr9:50770411-50770153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
21, 83
               

               
Conread position:
               
39-279
               

               
Cow position:
               
chr9:24724416-24724678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
36, 103
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chrX:9235193-9235452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
23, 82
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chrX:35228973-35228701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 13
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chrX:24529178-24529434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
76, 229
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chrX:23382646-23382267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
24, 105
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chrX:9156853-9157245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
24, 55
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chrX:36720154-36719880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
12, 17
               

               
Conread position:
               
3-363
               

               
Cow position:
               
chrX:37943211-37942831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
4-190
               

               
Cow position:
               
chrX:30756710-30756903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
23, 61
               

               
Conread position:
               
5-252
               

               
Cow position:
               
chrX:20687532-20687788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
12, 85
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chrX:38396839-38397116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
72, 175
               

               
Conread position:
               
5-349
               

               
Cow position:
               
chrX:25039123-25039495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
20, 317
               

               
Conread position:
               
24-305
               

               
Cow position:
               
chrX:2276731-2276435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
60, 47
               

               
Conread position:
               
29-366
               

               
Cow position:
               
chrX:4502090-4502451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
16, 85
               

               
Conread position:
               
30-309
               

               
Cow position:
               
chrX:3628334-3628636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 16
               

               
Conread position:
               
32-315
               

               
Cow position:
               
chrX:35832974-35833281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
47, 189
               

               
Conread position:
               
40-283
               

               
Cow position:
               
chrX:15339953-15339700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
37, 228
               

               
Conread position:
               
40-367
               

               
Cow position:
               
chrX:23414152-23413796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
35, 128
               

               
Conread position:
               
75-364
               

               
Cow position:
               
chrX:23948518-23948813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
55, 72
               

               
Conread position:
               
127-364
               

               
Cow position:
               
chrX:20834749-20834493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 96