Cow genome map

Conread name: Ova1-OVRM10018B04

Conread position: 1-114
Cow position: chr1:30519038-30519148 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 1-116
Cow position: chr1:33712414-33712529 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 102
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 20, 25

Conread position: 1-118
Cow position: chr1:55321793-55321677 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 355-682
Cow position: chr1:21087826-21088171 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 77

Conread position: 356-656
Cow position: chr1:9382138-9381816 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 233
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 31, 0

Conread position: 358-679
Cow position: chr1:97226289-97225956 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 153

Conread position: 358-682
Cow position: chr1:11291690-11291352 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 104

Conread position: 358-682
Cow position: chr1:33851701-33852043 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 358-682
Cow position: chr1:69766878-69767212 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 183

Conread position: 358-682
Cow position: chr1:89425989-89426331 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 78

Conread position: 358-684
Cow position: chr1:29609247-29608925 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 213
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 174, 141

Conread position: 359-679
Cow position: chr1:98659463-98659153 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 56

Conread position: 368-682
Cow position: chr1:44044206-44044540 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 375-677
Cow position: chr1:31403053-31402738 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 229
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 153, 16

Conread position: 375-682
Cow position: chr1:43570970-43570657 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 208
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 132, 95

Conread position: 376-569
Cow position: chr1:31329953-31329759 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 65

Conread position: 376-679
Cow position: chr1:57568371-57568690 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 64

Conread position: 376-679
Cow position: chr1:79456532-79456215 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 63

Conread position: 376-679
Cow position: chr1:82923738-82923432 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 69

Conread position: 380-684
Cow position: chr1:17941343-17941025 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 68

Conread position: 381-681
Cow position: chr1:72186434-72186122 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 58

Conread position: 382-642
Cow position: chr1:22905224-22905483 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 183
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 153, 56

Conread position: 382-679
Cow position: chr1:34692667-34692971 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 109, 33

Conread position: 382-679
Cow position: chr1:91892675-91892361 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 57

Conread position: 382-679
Cow position: chr1:99913864-99914178 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 57

Conread position: 383-503
Cow position: chr1:89770215-89770095 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 66, 41

Conread position: 383-511
Cow position: chr1:72981715-72981843 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 383-511
Cow position: chr1:85780332-85780204 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 383-534
Cow position: chr1:24651727-24651878 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 123
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 56, 50

Conread position: 383-571
Cow position: chr1:85882440-85882628 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 383-577
Cow position: chr1:91899438-91899633 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 190, 0

Conread position: 383-612
Cow position: chr1:58178543-58178300 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 157, 77

Conread position: 383-627
Cow position: chr1:86698770-86698512 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-634
Cow position: chr1:58883620-58883354 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 236

Conread position: 383-637
Cow position: chr1:30519135-30519406 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 193
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 92, 66

Conread position: 383-678
Cow position: chr1:76545093-76544782 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr1:5502413-5502723 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 218

Conread position: 383-679
Cow position: chr1:8825497-8825804 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 0

Conread position: 383-679
Cow position: chr1:21999509-21999199 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr1:25179585-25179272 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 202

Conread position: 383-679
Cow position: chr1:28873522-28873835 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr1:31418070-31417762 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 50

Conread position: 383-679
Cow position: chr1:42736899-42737213 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr1:52358830-52358517 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr1:58336283-58336593 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr1:62244198-62243885 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr1:63605331-63605021 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr1:69921990-69921680 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr1:72081225-72081521 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 383-679
Cow position: chr1:73070608-73070300 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 232

Conread position: 383-679
Cow position: chr1:76752205-76751891 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr1:82564945-82565258 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr1:88131219-88131531 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 383-679
Cow position: chr1:93854969-93855274 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 57

Conread position: 383-679
Cow position: chr1:94660120-94660430 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr1:102434591-102434283 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr1:17036117-17035801 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr1:28711358-28711647 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 383-682
Cow position: chr1:40053797-40054112 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 10

Conread position: 383-682
Cow position: chr1:40574655-40574971 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr1:40684255-40683942 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 77

Conread position: 383-682
Cow position: chr1:53198991-53199298 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 114, 237

Conread position: 383-682
Cow position: chr1:56163991-56164307 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr1:56490292-56490609 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 47

Conread position: 383-682
Cow position: chr1:65386774-65387086 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 246

Conread position: 383-682
Cow position: chr1:67834699-67834381 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr1:86547697-86547384 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 222

Conread position: 384-679
Cow position: chr1:30534575-30534263 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 385-676
Cow position: chr1:69403430-69403738 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 54

Conread position: 385-679
Cow position: chr1:6194683-6194989 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 54

Conread position: 385-679
Cow position: chr1:11860791-11860494 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 226
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 151, 77

Conread position: 385-682
Cow position: chr1:29034740-29035046 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 238

Conread position: 385-682
Cow position: chr1:59209707-59209392 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 385-682
Cow position: chr1:82912700-82912377 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 238
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 81, 76

Conread position: 385-682
Cow position: chr1:85792126-85792436 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 46

Conread position: 385-684
Cow position: chr1:15026805-15027121 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 219
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 81, 59

Conread position: 386-678
Cow position: chr1:17012294-17011984 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 386-679
Cow position: chr1:56143887-56143577 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 386-679
Cow position: chr1:82366629-82366939 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 217
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 149, 0

Conread position: 386-681
Cow position: chr1:67287273-67287579 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 255

Conread position: 387-679
Cow position: chr1:26518435-26518131 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 46

Conread position: 389-679
Cow position: chr1:48246285-48246587 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 397-628
Cow position: chr1:57366666-57366420 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 188
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 143, 193

Conread position: 399-679
Cow position: chr1:1460726-1460459 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 133

Conread position: 408-679
Cow position: chr1:24443855-24443567 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 214
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 17, 64

Conread position: 533-679
Cow position: chr1:81863895-81863749 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 557-679
Cow position: chr1:72038922-72038804 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 2-117
Cow position: chr10:17432884-17432769 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 358-519
Cow position: chr10:39816047-39815886 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 358-681
Cow position: chr10:39180224-39180568 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 305

Conread position: 358-682
Cow position: chr10:11698682-11699024 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 359-682
Cow position: chr10:11685204-11684865 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 228

Conread position: 375-679
Cow position: chr10:50135020-50135339 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 70

Conread position: 381-605
Cow position: chr10:8326827-8326589 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 183
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 155, 97

Conread position: 383-522
Cow position: chr10:17432785-17432648 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 383-534
Cow position: chr10:25564796-25564645 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 383-537
Cow position: chr10:32578752-32578906 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 383-568
Cow position: chr10:37770837-37771022 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 383-593
Cow position: chr10:51952157-51951934 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 152, 0

Conread position: 383-622
Cow position: chr10:1377712-1377963 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-675
Cow position: chr10:16926002-16926310 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 219

Conread position: 383-678
Cow position: chr10:8290448-8290755 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-678
Cow position: chr10:19495821-19495502 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 232
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 109, 0

Conread position: 383-678
Cow position: chr10:38344889-38344583 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 383-679
Cow position: chr10:14335376-14335071 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 383-679
Cow position: chr10:21487387-21487699 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr10:26597084-26597393 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 57

Conread position: 383-679
Cow position: chr10:30685043-30684735 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr10:39040831-39040527 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr10:57989522-57989212 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr10:62408379-62408066 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 383-682
Cow position: chr10:4191773-4191467 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 237

Conread position: 383-682
Cow position: chr10:5849161-5848846 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 383-682
Cow position: chr10:14804300-14804615 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 26

Conread position: 383-682
Cow position: chr10:28642004-28642314 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 47

Conread position: 383-682
Cow position: chr10:38538032-38537716 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr10:41157912-41158222 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 241

Conread position: 383-682
Cow position: chr10:41567567-41567880 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 222

Conread position: 383-682
Cow position: chr10:41877382-41877698 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 80

Conread position: 383-682
Cow position: chr10:56065138-56065454 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 384-679
Cow position: chr10:22101705-22102016 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 55

Conread position: 384-682
Cow position: chr10:47907396-47907711 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 385-610
Cow position: chr10:39779706-39779940 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 176
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 148, 215

Conread position: 385-679
Cow position: chr10:2120540-2120233 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 54

Conread position: 385-679
Cow position: chr10:7281621-7281310 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 385-679
Cow position: chr10:31538136-31538437 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 213
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 48, 58

Conread position: 385-682
Cow position: chr10:21400204-21399890 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 385-682
Cow position: chr10:55093733-55094047 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 387-679
Cow position: chr10:19715096-19714787 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 0

Conread position: 1-105
Cow position: chr11:8267529-8267425 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-114
Cow position: chr11:28063852-28063964 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 96
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 369-682
Cow position: chr11:52419486-52419809 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 236
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 167, 254

Conread position: 382-682
Cow position: chr11:9734560-9734254 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 222
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 93, 159

Conread position: 383-523
Cow position: chr11:20510233-20510371 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 383-534
Cow position: chr11:8245418-8245569 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 383-571
Cow position: chr11:4270751-4270564 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 117, 0

Conread position: 383-606
Cow position: chr11:28108253-28108493 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 181
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 153, 0

Conread position: 383-624
Cow position: chr11:23877413-23877671 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-634
Cow position: chr11:5343114-5342846 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 203
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr11:10847552-10847866 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 57

Conread position: 383-679
Cow position: chr11:11988217-11988527 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr11:12358314-12358001 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr11:19102376-19102080 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr11:26124818-26124511 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 87

Conread position: 383-679
Cow position: chr11:28054506-28054193 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr11:43514526-43514217 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 87

Conread position: 383-679
Cow position: chr11:53431956-53431643 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 0

Conread position: 383-679
Cow position: chr11:58134497-58134809 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr11:67846468-67846153 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr11:71329698-71330008 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-681
Cow position: chr11:45111726-45112033 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 215

Conread position: 383-681
Cow position: chr11:53287062-53286748 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 304

Conread position: 383-681
Cow position: chr11:61400948-61400643 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 115

Conread position: 383-682
Cow position: chr11:15983728-15984044 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr11:17107583-17107268 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 61

Conread position: 383-682
Cow position: chr11:19064146-19063831 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 112

Conread position: 383-682
Cow position: chr11:28229654-28229337 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 117

Conread position: 383-682
Cow position: chr11:36744078-36743762 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr11:57627944-57627619 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 383-682
Cow position: chr11:63655234-63654918 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr11:64046101-64046417 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr11:64081980-64081664 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr11:67450601-67450911 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 219

Conread position: 383-682
Cow position: chr11:73477411-73477727 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 383-682
Cow position: chr11:85393701-85393386 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 15

Conread position: 383-683
Cow position: chr11:84389737-84390056 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 97

Conread position: 383-684
Cow position: chr11:10090786-10091099 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 62

Conread position: 383-684
Cow position: chr11:66727483-66727794 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 56, 50

Conread position: 384-679
Cow position: chr11:38835320-38835019 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 219

Conread position: 385-659
Cow position: chr11:30206036-30206308 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 196
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 155, 85

Conread position: 385-671
Cow position: chr11:42432255-42432556 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 213
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 68, 86

Conread position: 385-678
Cow position: chr11:44251904-44252214 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 54

Conread position: 385-679
Cow position: chr11:44157141-44156832 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 54

Conread position: 386-665
Cow position: chr11:67153753-67154045 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 150, 232

Conread position: 386-677
Cow position: chr11:62229300-62229601 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 92

Conread position: 389-679
Cow position: chr11:76374097-76373800 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 69

Conread position: 390-679
Cow position: chr11:4027448-4027144 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 8

Conread position: 398-679
Cow position: chr11:44492152-44491859 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 72

Conread position: 541-681
Cow position: chr11:12093845-12093983 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 117
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 12, 0

Conread position: 542-682
Cow position: chr11:47760002-47759859 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 1-117
Cow position: chr12:11098539-11098653 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 101
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 80, 0

Conread position: 353-682
Cow position: chr12:3361275-3361632 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 32

Conread position: 358-627
Cow position: chr12:37558917-37559201 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 210
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 178, 36

Conread position: 379-681
Cow position: chr12:17979141-17979441 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 210
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 25, 20

Conread position: 383-534
Cow position: chr12:16821865-16822016 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 57, 48

Conread position: 383-605
Cow position: chr12:33986552-33986773 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 207, 0

Conread position: 383-625
Cow position: chr12:2282953-2283213 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 90, 116

Conread position: 383-642
Cow position: chr12:36479567-36479843 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-677
Cow position: chr12:21198354-21198663 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 226
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 153, 84

Conread position: 383-679
Cow position: chr12:600963-600653 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr12:6406254-6405941 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 383-679
Cow position: chr12:11098637-11098940 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 0

Conread position: 383-679
Cow position: chr12:28765626-28765315 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 197

Conread position: 383-679
Cow position: chr12:36427629-36427936 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 231

Conread position: 383-682
Cow position: chr12:4157767-4158083 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr12:8197606-8197922 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 383-682
Cow position: chr12:43030997-43030681 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 47

Conread position: 383-684
Cow position: chr12:22205351-22205036 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-684
Cow position: chr12:25100665-25100349 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-684
Cow position: chr12:36448971-36449285 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 200

Conread position: 386-682
Cow position: chr12:32653936-32654249 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 412-678
Cow position: chr12:21942158-21942440 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 124, 274

Conread position: 580-679
Cow position: chr12:1780951-1780853 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 358-679
Cow position: chr13:34937637-34937965 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 102

Conread position: 358-681
Cow position: chr13:60466479-60466813 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 73

Conread position: 358-682
Cow position: chr13:50109604-50109938 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 244
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 19, 36

Conread position: 383-534
Cow position: chr13:34910989-34910839 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 125
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 87, 0

Conread position: 383-600
Cow position: chr13:3057941-3057707 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 180
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 43, 52

Conread position: 383-619
Cow position: chr13:4941257-4941510 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 192
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 153, 0

Conread position: 383-646
Cow position: chr13:15450937-15450660 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 50

Conread position: 383-654
Cow position: chr13:9044676-9044964 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-663
Cow position: chr13:13324918-13325206 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 227

Conread position: 383-677
Cow position: chr13:30238421-30238724 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 60

Conread position: 383-679
Cow position: chr13:3654145-3653836 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr13:4483971-4484281 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 56

Conread position: 383-679
Cow position: chr13:20541861-20541554 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 231

Conread position: 383-679
Cow position: chr13:30303452-30303767 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 8

Conread position: 383-679
Cow position: chr13:30656806-30656499 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 209

Conread position: 383-679
Cow position: chr13:31612133-31611818 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 269

Conread position: 383-679
Cow position: chr13:32545552-32545865 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 56

Conread position: 383-679
Cow position: chr13:32737651-32737340 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 87

Conread position: 383-679
Cow position: chr13:35757417-35757730 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr13:2388649-2388328 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 241

Conread position: 383-682
Cow position: chr13:21840029-21839713 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr13:31733916-31733600 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 383-682
Cow position: chr13:41316028-41316344 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 383-682
Cow position: chr13:47229832-47229516 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-684
Cow position: chr13:13900041-13900357 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 384-618
Cow position: chr13:5625903-5625655 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 141, 76

Conread position: 384-678
Cow position: chr13:15924207-15923896 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 55

Conread position: 384-679
Cow position: chr13:34868919-34869229 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 73

Conread position: 385-679
Cow position: chr13:1592979-1592668 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 205

Conread position: 385-679
Cow position: chr13:6667942-6667634 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 48

Conread position: 385-679
Cow position: chr13:30244507-30244197 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 270

Conread position: 385-679
Cow position: chr13:34042191-34041885 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 385-684
Cow position: chr13:34325384-34325072 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 222

Conread position: 386-534
Cow position: chr13:26844264-26844413 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 108, 0

Conread position: 386-626
Cow position: chr13:2582479-2582233 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 117, 177

Conread position: 386-679
Cow position: chr13:23003130-23002821 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 206

Conread position: 386-679
Cow position: chr13:43982904-43982600 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 66

Conread position: 386-682
Cow position: chr13:17308645-17308959 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 44

Conread position: 388-627
Cow position: chr13:33336245-33335994 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 187
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 45, 51

Conread position: 543-679
Cow position: chr13:11798546-11798418 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 358-616
Cow position: chr14:45029105-45028836 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 18, 0

Conread position: 358-679
Cow position: chr14:30735239-30734909 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 40

Conread position: 358-682
Cow position: chr14:17491437-17491098 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 42

Conread position: 370-533
Cow position: chr14:33487991-33488152 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 374-627
Cow position: chr14:40340810-40341075 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 162, 10

Conread position: 376-679
Cow position: chr14:5511867-5512184 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 63

Conread position: 380-679
Cow position: chr14:17685445-17685756 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 211

Conread position: 380-682
Cow position: chr14:48970727-48971040 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 215
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 155, 90

Conread position: 382-677
Cow position: chr14:16273252-16272940 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 0

Conread position: 383-533
Cow position: chr14:29047858-29047708 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 383-538
Cow position: chr14:22031370-22031215 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 383-538
Cow position: chr14:35386761-35386608 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 383-578
Cow position: chr14:45206362-45206555 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 87, 0

Conread position: 383-649
Cow position: chr14:33393733-33393454 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 216
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 52

Conread position: 383-659
Cow position: chr14:38531687-38531401 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 229

Conread position: 383-670
Cow position: chr14:44686095-44686396 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 222

Conread position: 383-672
Cow position: chr14:9045611-9045918 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 383-672
Cow position: chr14:45081095-45081401 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-672
Cow position: chr14:50138643-50138943 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 124

Conread position: 383-677
Cow position: chr14:20782508-20782818 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 383-677
Cow position: chr14:44377852-44378158 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 50

Conread position: 383-678
Cow position: chr14:48825345-48825649 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 203

Conread position: 383-679
Cow position: chr14:7472411-7472723 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 259

Conread position: 383-679
Cow position: chr14:11154114-11153804 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 56

Conread position: 383-679
Cow position: chr14:12743020-12742709 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 283

Conread position: 383-679
Cow position: chr14:13779006-13779317 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 37

Conread position: 383-679
Cow position: chr14:17001010-17000701 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 70

Conread position: 383-679
Cow position: chr14:29777452-29777138 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 221

Conread position: 383-679
Cow position: chr14:30596332-30596021 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 87

Conread position: 383-679
Cow position: chr14:45161149-45161456 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 221

Conread position: 383-679
Cow position: chr14:50110619-50110932 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-681
Cow position: chr14:13864036-13863731 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 153, 221

Conread position: 383-681
Cow position: chr14:19328218-19327908 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr14:45672000-45671686 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 48

Conread position: 383-684
Cow position: chr14:48254251-48253937 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 308

Conread position: 384-679
Cow position: chr14:5529114-5529426 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 384-679
Cow position: chr14:45302905-45302614 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 385-533
Cow position: chr14:45917696-45917844 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 385-630
Cow position: chr14:40738562-40738819 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 151, 202

Conread position: 385-668
Cow position: chr14:44287197-44286901 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 256

Conread position: 385-678
Cow position: chr14:44226448-44226759 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 226
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 151, 207

Conread position: 385-679
Cow position: chr14:44581416-44581712 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 109, 76

Conread position: 385-684
Cow position: chr14:33673467-33673785 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 212
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 151, 0

Conread position: 386-679
Cow position: chr14:41408939-41409243 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 201
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 155, 121

Conread position: 387-679
Cow position: chr14:13273500-13273803 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 182

Conread position: 389-684
Cow position: chr14:13621087-13620787 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 208

Conread position: 390-679
Cow position: chr14:15276174-15275870 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 43

Conread position: 541-671
Cow position: chr14:35385848-35385718 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 112
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 1-117
Cow position: chr15:36626342-36626226 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-117
Cow position: chr15:41366124-41366238 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 358-678
Cow position: chr15:17080181-17079846 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 251

Conread position: 358-679
Cow position: chr15:9429968-9430300 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 46

Conread position: 360-681
Cow position: chr15:56516-56842 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 226
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 17, 100

Conread position: 362-534
Cow position: chr15:32480850-32480680 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 374-533
Cow position: chr15:24794395-24794551 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 65, 20

Conread position: 376-679
Cow position: chr15:31358932-31359243 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 292

Conread position: 377-534
Cow position: chr15:14634468-14634629 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 68

Conread position: 377-577
Cow position: chr15:36626242-36626034 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 177

Conread position: 379-679
Cow position: chr15:17292492-17292823 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 242
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 157, 88

Conread position: 382-619
Cow position: chr15:12421113-12420860 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 190
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 154, 139

Conread position: 383-533
Cow position: chr15:42320374-42320225 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 48, 0

Conread position: 383-534
Cow position: chr15:35753544-35753393 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 95, 87

Conread position: 383-534
Cow position: chr15:51216641-51216789 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 50, 56

Conread position: 383-538
Cow position: chr15:36077294-36077449 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 383-671
Cow position: chr15:42936761-42937066 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-672
Cow position: chr15:35647614-35647314 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 229

Conread position: 383-678
Cow position: chr15:18267940-18267628 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr15:315807-315495 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr15:369108-368812 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 59

Conread position: 383-679
Cow position: chr15:524808-524497 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 207

Conread position: 383-679
Cow position: chr15:1764142-1764451 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 229
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 68, 78

Conread position: 383-679
Cow position: chr15:3261281-3260958 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 383-679
Cow position: chr15:4765258-4765537 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 224, 163

Conread position: 383-679
Cow position: chr15:4922203-4922511 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 235

Conread position: 383-679
Cow position: chr15:4961694-4961998 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 219
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 115, 60

Conread position: 383-679
Cow position: chr15:6155896-6155583 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr15:6471872-6471559 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr15:6553767-6553461 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 383-679
Cow position: chr15:7260682-7260959 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 95, 0

Conread position: 383-679
Cow position: chr15:10888664-10888978 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 50

Conread position: 383-679
Cow position: chr15:14582303-14581998 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 226

Conread position: 383-679
Cow position: chr15:21665693-21665385 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr15:24295147-24295460 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr15:28490096-28489788 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 383-679
Cow position: chr15:44828847-44829160 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-681
Cow position: chr15:50123895-50123581 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 310

Conread position: 383-682
Cow position: chr15:789525-789209 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 383-682
Cow position: chr15:1772545-1772861 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr15:2647608-2647291 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr15:4196509-4196825 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr15:19738000-19737687 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr15:32711149-32711456 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 51

Conread position: 383-684
Cow position: chr15:7837297-7837613 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 384-619
Cow position: chr15:4385321-4385566 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 49, 55

Conread position: 384-669
Cow position: chr15:32693627-32693920 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 211
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 127, 250

Conread position: 384-679
Cow position: chr15:18332775-18332466 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 385-678
Cow position: chr15:15347065-15346755 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 385-679
Cow position: chr15:4651418-4651724 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 30

Conread position: 385-679
Cow position: chr15:4671485-4671794 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 226
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 19, 222

Conread position: 385-679
Cow position: chr15:32494332-32494024 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 385-679
Cow position: chr15:38980719-38981030 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 385-682
Cow position: chr15:1834412-1834107 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 228
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 112, 41

Conread position: 385-683
Cow position: chr15:3888926-3889243 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 64

Conread position: 386-679
Cow position: chr15:444657-444965 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 84

Conread position: 386-679
Cow position: chr15:2076703-2077010 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 386-679
Cow position: chr15:7934381-7934691 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 205

Conread position: 391-684
Cow position: chr15:35735632-35735943 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 231
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 49, 42

Conread position: 398-679
Cow position: chr15:8099546-8099837 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 201

Conread position: 413-538
Cow position: chr15:6592874-6592749 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 463-679
Cow position: chr15:31862426-31862202 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 73, 149

Conread position: 358-682
Cow position: chr16:4302658-4302319 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 76

Conread position: 358-682
Cow position: chr16:41163386-41163051 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 244

Conread position: 376-606
Cow position: chr16:6943301-6943548 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 185
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 50, 59

Conread position: 376-623
Cow position: chr16:16271898-16271650 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 162, 55

Conread position: 380-679
Cow position: chr16:2411265-2410949 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 59

Conread position: 380-679
Cow position: chr16:43897568-43897255 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 67

Conread position: 381-650
Cow position: chr16:15566444-15566730 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 262

Conread position: 381-654
Cow position: chr16:15492932-15493220 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 238

Conread position: 383-534
Cow position: chr16:18498612-18498464 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 383-534
Cow position: chr16:29033747-29033898 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 383-600
Cow position: chr16:31832331-31832565 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 180
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 43, 52

Conread position: 383-612
Cow position: chr16:5484025-5484269 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 186
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 153, 234

Conread position: 383-619
Cow position: chr16:25188335-25188582 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 185
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 153, 119

Conread position: 383-619
Cow position: chr16:25892422-25892671 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 152, 233

Conread position: 383-619
Cow position: chr16:53046053-53046306 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 191
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 56, 48

Conread position: 383-621
Cow position: chr16:2239034-2238798 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 224, 16

Conread position: 383-678
Cow position: chr16:14666107-14665796 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 237

Conread position: 383-678
Cow position: chr16:25441330-25441643 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 58

Conread position: 383-678
Cow position: chr16:25457759-25457447 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr16:407326-407016 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr16:2483435-2483122 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr16:2727582-2727270 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr16:4479278-4478965 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr16:8816400-8816087 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr16:10203733-10203421 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 117

Conread position: 383-679
Cow position: chr16:10437947-10438254 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 112

Conread position: 383-679
Cow position: chr16:15476548-15476859 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 383-679
Cow position: chr16:24105409-24105720 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 113

Conread position: 383-679
Cow position: chr16:28471397-28471084 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr16:29046728-29047040 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 64

Conread position: 383-679
Cow position: chr16:31592208-31591902 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 282

Conread position: 383-681
Cow position: chr16:28170667-28170353 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 304

Conread position: 383-682
Cow position: chr16:32438-32753 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr16:23983016-23983330 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 63

Conread position: 383-683
Cow position: chr16:25341672-25341978 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 57

Conread position: 383-684
Cow position: chr16:34530027-34530334 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 234
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 148, 187

Conread position: 384-623
Cow position: chr16:49235121-49234869 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 193
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 152, 49

Conread position: 384-679
Cow position: chr16:1567747-1567435 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 55

Conread position: 385-654
Cow position: chr16:23252798-23252516 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 53

Conread position: 385-678
Cow position: chr16:26663459-26663766 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 385-679
Cow position: chr16:12538218-12537907 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 385-679
Cow position: chr16:25257644-25257954 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 76

Conread position: 386-616
Cow position: chr16:42739399-42739154 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 15, 180

Conread position: 386-682
Cow position: chr16:5661551-5661864 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 391-684
Cow position: chr16:27734064-27733770 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 11, 124

Conread position: 398-679
Cow position: chr16:1431906-1432206 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 278

Conread position: 442-679
Cow position: chr16:25085392-25085637 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 509-684
Cow position: chr16:29033900-29034072 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 15, 87

Conread position: 1-105
Cow position: chr17:27345983-27346086 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 1-118
Cow position: chr17:228131-228014 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-109
Cow position: chr17:15156784-15156680 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 347-679
Cow position: chr17:14040789-14040444 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 124

Conread position: 353-526
Cow position: chr17:43952317-43952143 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 24, 78

Conread position: 358-666
Cow position: chr17:20665475-20665148 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 358-672
Cow position: chr17:15143116-15142785 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 233

Conread position: 358-682
Cow position: chr17:24782418-24782752 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 68

Conread position: 359-679
Cow position: chr17:6068814-6069146 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 0

Conread position: 375-654
Cow position: chr17:250435-250730 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 211
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 131, 262

Conread position: 376-679
Cow position: chr17:2579891-2580212 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 0

Conread position: 381-679
Cow position: chr17:18103405-18103098 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 37

Conread position: 383-532
Cow position: chr17:19269084-19268935 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 383-614
Cow position: chr17:15850681-15850929 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 192
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 50, 56

Conread position: 383-619
Cow position: chr17:20183707-20183950 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 186
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 153, 215

Conread position: 383-678
Cow position: chr17:4060382-4060689 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 229
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 153, 228

Conread position: 383-679
Cow position: chr17:3642553-3642243 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 116

Conread position: 383-679
Cow position: chr17:6260126-6260439 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr17:11087441-11087133 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 63

Conread position: 383-679
Cow position: chr17:14894437-14894750 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr17:40805101-40805402 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-682
Cow position: chr17:1382537-1382226 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 0

Conread position: 383-682
Cow position: chr17:6119985-6120304 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 87

Conread position: 383-682
Cow position: chr17:14216749-14216441 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 48

Conread position: 383-682
Cow position: chr17:15156688-15156377 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 79

Conread position: 383-682
Cow position: chr17:15436068-15436384 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr17:23324177-23323861 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr17:31767762-31767449 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 222

Conread position: 383-682
Cow position: chr17:34156405-34156710 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 230
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 153, 216

Conread position: 384-679
Cow position: chr17:5226901-5227211 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 117

Conread position: 385-659
Cow position: chr17:20087462-20087175 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 197
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 151, 218

Conread position: 385-677
Cow position: chr17:1657564-1657261 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 211
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 8, 86

Conread position: 385-679
Cow position: chr17:18194111-18194402 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 187
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 165, 161

Conread position: 385-684
Cow position: chr17:151595-151280 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 226
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 8, 236

Conread position: 400-682
Cow position: chr17:9081146-9080847 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 534-679
Cow position: chr17:20100029-20099888 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 538-677
Cow position: chr17:20081408-20081276 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 539-679
Cow position: chr17:15371410-15371549 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 132, 0

Conread position: 1-116
Cow position: chr18:33269217-33269330 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 376-682
Cow position: chr18:51660825-51661143 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 94

Conread position: 380-641
Cow position: chr18:29765461-29765739 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 59

Conread position: 380-677
Cow position: chr18:25351237-25351552 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 59

Conread position: 380-679
Cow position: chr18:33750500-33750811 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 226
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 156, 271

Conread position: 383-679
Cow position: chr18:14130882-14131191 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr18:14416469-14416783 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr18:16088637-16088945 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr18:36508824-36509137 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr18:40478874-40479187 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr18:41840333-41840010 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 383-679
Cow position: chr18:52651409-52651715 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 383-679
Cow position: chr18:54023634-54023338 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 233
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 153, 51

Conread position: 383-679
Cow position: chr18:54171046-54170733 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 64

Conread position: 383-682
Cow position: chr18:51342171-51342487 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr18:51462595-51462282 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 383-682
Cow position: chr18:55088436-55088119 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 383-684
Cow position: chr18:23798137-23798451 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 112

Conread position: 384-618
Cow position: chr18:37505553-37505801 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 192
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 49, 55

Conread position: 385-682
Cow position: chr18:11274619-11274305 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 391-679
Cow position: chr18:28973393-28973086 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 227

Conread position: 499-677
Cow position: chr18:1209313-1209492 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 13

Conread position: 531-678
Cow position: chr18:29237593-29237733 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 1-117
Cow position: chr19:204352-204468 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 350-679
Cow position: chr19:40887285-40886942 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 113

Conread position: 356-682
Cow position: chr19:20105173-20105515 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 294

Conread position: 371-534
Cow position: chr19:189900-190062 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 376-679
Cow position: chr19:33873915-33874228 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 62

Conread position: 376-682
Cow position: chr19:7342549-7342872 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 0

Conread position: 380-679
Cow position: chr19:2273893-2273579 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 207

Conread position: 383-626
Cow position: chr19:28593753-28594008 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 196
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 152, 87

Conread position: 383-677
Cow position: chr19:893112-892803 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr19:341715-342021 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 224

Conread position: 383-679
Cow position: chr19:5729325-5729638 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr19:7488807-7489117 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr19:33942097-33942407 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 56

Conread position: 383-679
Cow position: chr19:39185050-39184736 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 0

Conread position: 383-679
Cow position: chr19:39391004-39391313 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 71

Conread position: 383-682
Cow position: chr19:773085-773400 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 78

Conread position: 383-682
Cow position: chr19:32211584-32211270 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 212

Conread position: 384-679
Cow position: chr19:172703-173012 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 50

Conread position: 385-679
Cow position: chr19:204454-204762 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 385-679
Cow position: chr19:12773611-12773920 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 54

Conread position: 385-679
Cow position: chr19:27052018-27051702 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 151, 0

Conread position: 385-679
Cow position: chr19:28581163-28580856 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 386-679
Cow position: chr19:438943-438633 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 386-681
Cow position: chr19:5901003-5900699 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 231
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 151, 266

Conread position: 386-682
Cow position: chr19:43144205-43144515 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 36, 42

Conread position: 402-680
Cow position: chr19:162593-162303 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 39, 31

Conread position: 1-117
Cow position: chr2:1362998-1363113 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 101, 0

Conread position: 1-117
Cow position: chr2:10268822-10268706 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-117
Cow position: chr2:41172508-41172618 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 100
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 2-112
Cow position: chr2:16075903-16075794 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 100, 79

Conread position: 5-110
Cow position: chr2:198950-198845 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 353-508
Cow position: chr2:41159041-41159197 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 66

Conread position: 358-636
Cow position: chr2:57588601-57588897 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 358-679
Cow position: chr2:11729775-11730107 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 81, 21

Conread position: 358-679
Cow position: chr2:31297703-31298041 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 358-681
Cow position: chr2:2412891-2412552 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 325

Conread position: 358-682
Cow position: chr2:10732859-10732527 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 160

Conread position: 358-683
Cow position: chr2:41686418-41686757 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 114

Conread position: 374-678
Cow position: chr2:14777895-14777581 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 375-619
Cow position: chr2:28650304-28650042 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 58, 64

Conread position: 376-488
Cow position: chr2:6961389-6961501 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 376-679
Cow position: chr2:36980305-36980625 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 380-612
Cow position: chr2:5870424-5870185 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 183
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 124, 129

Conread position: 380-679
Cow position: chr2:10186300-10185981 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 54

Conread position: 380-679
Cow position: chr2:50077534-50077844 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 24

Conread position: 380-681
Cow position: chr2:39622555-39622856 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 240
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 154, 42

Conread position: 382-556
Cow position: chr2:81256743-81256917 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 142, 168

Conread position: 382-679
Cow position: chr2:5485038-5484737 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 216
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 154, 140

Conread position: 383-523
Cow position: chr2:50983291-50983152 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 16, 0

Conread position: 383-529
Cow position: chr2:67419369-67419221 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 383-534
Cow position: chr2:39421510-39421659 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 383-642
Cow position: chr2:12224376-12224095 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 209
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 50, 56

Conread position: 383-644
Cow position: chr2:20902612-20902346 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 192
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 139, 50

Conread position: 383-654
Cow position: chr2:42671055-42670770 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 56

Conread position: 383-675
Cow position: chr2:49604871-49605184 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 221
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 115, 300

Conread position: 383-679
Cow position: chr2:282755-282446 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 290

Conread position: 383-679
Cow position: chr2:2088242-2087929 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr2:8118474-8118785 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr2:11159189-11158875 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr2:13045768-13045460 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr2:14823053-14823346 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 29

Conread position: 383-679
Cow position: chr2:16290273-16290579 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 217

Conread position: 383-679
Cow position: chr2:16900187-16900496 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr2:19011278-19011589 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 200

Conread position: 383-679
Cow position: chr2:22077715-22078028 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr2:32066147-32065837 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr2:41172602-41172911 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 221
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 153, 296

Conread position: 383-679
Cow position: chr2:65938514-65938206 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 222

Conread position: 383-679
Cow position: chr2:80293016-80292708 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-682
Cow position: chr2:5474447-5474763 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr2:49472178-49472494 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 383-682
Cow position: chr2:49590332-49590648 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 383-682
Cow position: chr2:57335127-57335443 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr2:80955705-80955392 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 222

Conread position: 383-683
Cow position: chr2:4403226-4402911 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 230

Conread position: 384-679
Cow position: chr2:5813447-5813149 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 224
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 135, 205

Conread position: 384-679
Cow position: chr2:28620092-28619789 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 98

Conread position: 384-679
Cow position: chr2:47603313-47603004 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 278

Conread position: 384-679
Cow position: chr2:53329693-53330001 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 280

Conread position: 384-682
Cow position: chr2:59413749-59413437 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 265

Conread position: 385-533
Cow position: chr2:35355637-35355783 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 385-534
Cow position: chr2:44091234-44091383 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 385-679
Cow position: chr2:10268720-10268414 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 385-682
Cow position: chr2:54737439-54737728 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 49

Conread position: 386-634
Cow position: chr2:72597545-72597805 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 148, 56

Conread position: 386-679
Cow position: chr2:24146799-24147113 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 386-682
Cow position: chr2:51990315-51990008 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 44

Conread position: 387-679
Cow position: chr2:36992185-36992490 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 149, 80

Conread position: 388-575
Cow position: chr2:903967-904143 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 401-677
Cow position: chr2:73193090-73193358 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 67, 0

Conread position: 429-672
Cow position: chr2:34051149-34051404 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 106, 42

Conread position: 440-679
Cow position: chr2:41150614-41150862 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 188
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 100, 122

Conread position: 458-682
Cow position: chr2:51617269-51617501 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 178
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 79, 182

Conread position: 483-679
Cow position: chr2:7903072-7903285 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 5, 23

Conread position: 529-679
Cow position: chr2:15060679-15060529 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 555-681
Cow position: chr2:32655789-32655914 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 117, 0

Conread position: 358-679
Cow position: chr20:22697695-22698024 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 227
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 76, 71

Conread position: 372-679
Cow position: chr20:12568960-12569284 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 0

Conread position: 380-631
Cow position: chr20:25850542-25850279 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 59

Conread position: 383-532
Cow position: chr20:7115034-7114885 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 383-648
Cow position: chr20:28161221-28161506 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-655
Cow position: chr20:16179363-16179076 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 152, 84

Conread position: 383-673
Cow position: chr20:30684773-30685077 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 247

Conread position: 383-679
Cow position: chr20:5535388-5535696 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 246

Conread position: 383-679
Cow position: chr20:12438308-12437998 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 70

Conread position: 383-679
Cow position: chr20:13763357-13763670 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr20:15292457-15292767 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr20:21914780-21915081 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr20:23469213-23468901 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr20:27869651-27869965 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 305

Conread position: 383-679
Cow position: chr20:29948952-29949265 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr20:35124948-35125257 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 233

Conread position: 383-682
Cow position: chr20:823213-823524 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 220

Conread position: 383-682
Cow position: chr20:19438385-19438688 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 51

Conread position: 383-682
Cow position: chr20:25961549-25961865 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 383-684
Cow position: chr20:8215971-8216282 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 69

Conread position: 385-534
Cow position: chr20:3271159-3271302 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 385-677
Cow position: chr20:42905660-42905962 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 224
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 147, 59

Conread position: 385-678
Cow position: chr20:23799340-23799644 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 44

Conread position: 385-679
Cow position: chr20:28565139-28564828 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 54

Conread position: 386-619
Cow position: chr20:8003773-8003523 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 189
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 150, 0

Conread position: 387-682
Cow position: chr20:8974360-8974054 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 228

Conread position: 413-678
Cow position: chr20:18314840-18314579 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 26, 20

Conread position: 435-679
Cow position: chr20:24616356-24616106 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 123, 0

Conread position: 1-117
Cow position: chr21:21915158-21915274 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-117
Cow position: chr21:27282858-27282974 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 351-679
Cow position: chr21:2416746-2417091 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 296

Conread position: 358-679
Cow position: chr21:28735775-28736114 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 114

Conread position: 358-682
Cow position: chr21:12055462-12055123 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 248

Conread position: 376-623
Cow position: chr21:27282951-27283214 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 0

Conread position: 376-637
Cow position: chr21:21925756-21925490 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 181
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 69

Conread position: 382-682
Cow position: chr21:39425626-39425942 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 37

Conread position: 383-603
Cow position: chr21:33252077-33252308 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 153, 69

Conread position: 383-623
Cow position: chr21:2511460-2511717 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 197
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 57, 51

Conread position: 383-634
Cow position: chr21:27070696-27070428 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-643
Cow position: chr21:30562374-30562646 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-665
Cow position: chr21:31559088-31558795 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 291

Conread position: 383-677
Cow position: chr21:2475976-2475665 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-677
Cow position: chr21:23812743-23813053 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-678
Cow position: chr21:9892504-9892784 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 210
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 66, 0

Conread position: 383-679
Cow position: chr21:29649-29958 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 233
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 6, 78

Conread position: 383-679
Cow position: chr21:146494-146805 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr21:467457-467754 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 205
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 123, 87

Conread position: 383-679
Cow position: chr21:1192323-1192636 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr21:10567240-10567553 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 56

Conread position: 383-679
Cow position: chr21:13313337-13313639 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 234

Conread position: 383-679
Cow position: chr21:30599356-30599046 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr21:37046185-37046498 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr21:40271109-40270796 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr21:11506161-11506476 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 143

Conread position: 383-682
Cow position: chr21:37371810-37372120 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 241

Conread position: 384-679
Cow position: chr21:2711070-2711366 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 78

Conread position: 385-534
Cow position: chr21:21518090-21518239 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 385-679
Cow position: chr21:10850650-10850956 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 54

Conread position: 385-679
Cow position: chr21:35144330-35144638 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 386-679
Cow position: chr21:1287651-1287342 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 12

Conread position: 386-679
Cow position: chr21:4094072-4094381 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 212
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 126, 120

Conread position: 392-538
Cow position: chr21:28255777-28255931 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 459-679
Cow position: chr21:4184560-4184780 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 99
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 534-679
Cow position: chr21:28256161-28256306 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-105
Cow position: chr22:36533441-36533337 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-116
Cow position: chr22:35907095-35906981 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 350-679
Cow position: chr22:36184116-36184461 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 6

Conread position: 358-539
Cow position: chr22:13918201-13918388 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 358-626
Cow position: chr22:46630675-46630391 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 193
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 178, 86

Conread position: 358-679
Cow position: chr22:12731303-12730964 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 358-682
Cow position: chr22:19143319-19142983 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 82

Conread position: 358-682
Cow position: chr22:35671990-35671648 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 359-682
Cow position: chr22:5232915-5232573 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 376-679
Cow position: chr22:31334646-31334331 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 0

Conread position: 380-679
Cow position: chr22:18815990-18815676 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 302

Conread position: 381-678
Cow position: chr22:5940897-5940600 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 198
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 154, 89

Conread position: 383-533
Cow position: chr22:16814278-16814428 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 383-621
Cow position: chr22:3306003-3305752 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-678
Cow position: chr22:3277964-3277655 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 78

Conread position: 383-678
Cow position: chr22:17328341-17328028 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 87

Conread position: 383-678
Cow position: chr22:24950488-24950800 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr22:560306-559997 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr22:18027671-18027985 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 383-679
Cow position: chr22:21589732-21590041 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 63

Conread position: 383-679
Cow position: chr22:31313738-31314050 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 383-679
Cow position: chr22:35906996-35906699 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 118

Conread position: 383-679
Cow position: chr22:42991570-42991883 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr22:44396841-44397154 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-680
Cow position: chr22:8739821-8739509 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 228

Conread position: 383-682
Cow position: chr22:10909443-10909130 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 47

Conread position: 383-682
Cow position: chr22:14629809-14630125 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr22:27309385-27309069 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr22:34168729-34169045 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 385-571
Cow position: chr22:525294-525108 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 385-677
Cow position: chr22:36861133-36860828 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 385-679
Cow position: chr22:15313555-15313245 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 85

Conread position: 385-679
Cow position: chr22:44934377-44934688 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 385-682
Cow position: chr22:44369232-44368920 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 49

Conread position: 386-534
Cow position: chr22:37132821-37132969 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 123
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 386-678
Cow position: chr22:326772-326466 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 180

Conread position: 386-679
Cow position: chr22:39469121-39468817 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 386-682
Cow position: chr22:27284426-27284733 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 238

Conread position: 387-679
Cow position: chr22:48004936-48005244 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 226
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 65, 13

Conread position: 387-682
Cow position: chr22:42988958-42989270 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 0

Conread position: 407-678
Cow position: chr22:37072663-37072378 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 203
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 67, 29

Conread position: 538-679
Cow position: chr22:1322783-1322920 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 1-117
Cow position: chr23:2757893-2758009 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 103
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 376-534
Cow position: chr23:11778880-11779038 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 376-679
Cow position: chr23:15219512-15219200 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 197

Conread position: 380-596
Cow position: chr23:22874793-22874569 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 116, 64

Conread position: 380-679
Cow position: chr23:36030982-36030669 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 0

Conread position: 381-679
Cow position: chr23:27399896-27400211 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 0

Conread position: 383-523
Cow position: chr23:22146855-22146715 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 383-534
Cow position: chr23:17785930-17785779 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 383-534
Cow position: chr23:31594852-31594702 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 383-593
Cow position: chr23:25683642-25683435 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 165
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 17, 96

Conread position: 383-613
Cow position: chr23:14965353-14965106 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 193
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 50, 56

Conread position: 383-630
Cow position: chr23:2794838-2794576 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 150, 101

Conread position: 383-637
Cow position: chr23:20302603-20302864 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 115, 0

Conread position: 383-644
Cow position: chr23:20155817-20155539 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-649
Cow position: chr23:16616447-16616165 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 244

Conread position: 383-650
Cow position: chr23:28077765-28078044 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 51

Conread position: 383-654
Cow position: chr23:2757993-2758281 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 135

Conread position: 383-663
Cow position: chr23:28368128-28367831 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-673
Cow position: chr23:1024627-1024313 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 298

Conread position: 383-678
Cow position: chr23:4640231-4639919 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 383-678
Cow position: chr23:28025061-28025373 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr23:2716787-2717097 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr23:4817414-4817726 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr23:15177469-15177779 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 383-679
Cow position: chr23:27970932-27971245 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr23:28108054-28108355 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 224
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 153, 114

Conread position: 383-679
Cow position: chr23:28913791-28914100 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 70

Conread position: 383-681
Cow position: chr23:19950195-19949892 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 214

Conread position: 383-681
Cow position: chr23:28217682-28217996 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 304

Conread position: 383-682
Cow position: chr23:966943-966631 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 235

Conread position: 383-682
Cow position: chr23:4360221-4360515 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 51

Conread position: 383-682
Cow position: chr23:23830352-23830668 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr23:31447207-31447523 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-684
Cow position: chr23:5874248-5873941 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 234
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 152, 43

Conread position: 385-488
Cow position: chr23:15526012-15526116 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 385-679
Cow position: chr23:19489942-19490247 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 54

Conread position: 385-680
Cow position: chr23:14974157-14973860 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 224
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 151, 63

Conread position: 387-679
Cow position: chr23:16615036-16614732 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 391-680
Cow position: chr23:29451916-29451637 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 93, 0

Conread position: 1-117
Cow position: chr24:6669764-6669649 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 1-117
Cow position: chr24:14390175-14390060 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 9-114
Cow position: chr24:6336242-6336348 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 36

Conread position: 357-682
Cow position: chr24:5992776-5992432 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 358-682
Cow position: chr24:6084523-6084861 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 368-679
Cow position: chr24:12237709-12238033 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 17

Conread position: 381-679
Cow position: chr24:148132-147820 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-586
Cow position: chr24:7061872-7062092 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 153, 0

Conread position: 383-600
Cow position: chr24:12796730-12796511 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 153, 50

Conread position: 383-641
Cow position: chr24:12130491-12130221 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-658
Cow position: chr24:22793654-22793946 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-678
Cow position: chr24:9188253-9187945 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 48

Conread position: 383-679
Cow position: chr24:4415045-4414742 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 73

Conread position: 383-679
Cow position: chr24:17696493-17696182 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 38

Conread position: 383-679
Cow position: chr24:19833870-19834180 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr24:22971571-22971882 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 286

Conread position: 383-679
Cow position: chr24:29187768-29188080 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 136

Conread position: 383-679
Cow position: chr24:33933851-33934164 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-681
Cow position: chr24:14754522-14754207 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr24:6024627-6024311 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr24:13188651-13188964 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 383-682
Cow position: chr24:23505384-23505072 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 48

Conread position: 383-682
Cow position: chr24:29305845-29305528 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 47

Conread position: 383-682
Cow position: chr24:44018011-44018326 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 247

Conread position: 385-624
Cow position: chr24:33738859-33738603 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 151, 0

Conread position: 385-679
Cow position: chr24:38638028-38638325 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 209
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 113, 221

Conread position: 385-681
Cow position: chr24:6538442-6538747 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 219
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 48, 118

Conread position: 385-682
Cow position: chr24:43814244-43814557 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 14

Conread position: 3-117
Cow position: chr25:11932759-11932645 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 358-654
Cow position: chr25:18194690-18194378 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 113

Conread position: 380-679
Cow position: chr25:26879628-26879942 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 141

Conread position: 383-539
Cow position: chr25:17560196-17560041 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 128
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 383-606
Cow position: chr25:20775486-20775254 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 180
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 152, 217

Conread position: 383-609
Cow position: chr25:8675356-8675599 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 189
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 50, 56

Conread position: 383-613
Cow position: chr25:18889574-18889330 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-621
Cow position: chr25:11932661-11932410 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 148, 87

Conread position: 383-627
Cow position: chr25:18274541-18274283 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 174
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 109, 0

Conread position: 383-679
Cow position: chr25:12942259-12941936 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 383-679
Cow position: chr25:13781471-13781784 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr25:20630071-20630380 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 221

Conread position: 383-679
Cow position: chr25:26279687-26279994 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 56

Conread position: 383-679
Cow position: chr25:34346577-34346264 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-682
Cow position: chr25:6172337-6172653 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 383-682
Cow position: chr25:13550596-13550280 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 385-544
Cow position: chr25:9544501-9544661 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 139, 0

Conread position: 385-678
Cow position: chr25:18303846-18304143 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 151, 223

Conread position: 385-679
Cow position: chr25:34014043-34013729 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 56

Conread position: 386-679
Cow position: chr25:39557981-39557679 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 199
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 166, 19

Conread position: 358-682
Cow position: chr26:30783172-30783514 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 373-681
Cow position: chr26:17396468-17396142 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 66

Conread position: 383-670
Cow position: chr26:4333842-4333539 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 118

Conread position: 383-678
Cow position: chr26:18852675-18852987 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 52

Conread position: 383-679
Cow position: chr26:6848978-6848675 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 115

Conread position: 383-679
Cow position: chr26:21826224-21825918 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 79

Conread position: 383-681
Cow position: chr26:15144305-15143991 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 310

Conread position: 383-682
Cow position: chr26:2199081-2199397 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr26:2351907-2351591 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 47

Conread position: 383-682
Cow position: chr26:3030373-3030057 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 383-682
Cow position: chr26:12588110-12587794 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 385-679
Cow position: chr26:19351050-19350744 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 54

Conread position: 389-682
Cow position: chr26:8870337-8870646 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 189

Conread position: 1-117
Cow position: chr27:14460158-14460042 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 102
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-117
Cow position: chr27:15277771-15277654 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 104
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 353-679
Cow position: chr27:15037224-15036882 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 239

Conread position: 358-679
Cow position: chr27:5911234-5911573 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 358-679
Cow position: chr27:26325439-26325778 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 376-679
Cow position: chr27:15046559-15046877 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 215

Conread position: 383-534
Cow position: chr27:15277670-15277520 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 61, 0

Conread position: 383-550
Cow position: chr27:27663340-27663507 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 383-679
Cow position: chr27:893606-893919 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr27:9330120-9330433 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr27:9992804-9992492 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr27:14460058-14459745 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 0

Conread position: 383-682
Cow position: chr27:1209750-1210064 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 64

Conread position: 383-682
Cow position: chr27:15541721-15542037 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr27:16034002-16033686 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-684
Cow position: chr27:23335562-23335874 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 384-654
Cow position: chr27:15637971-15637687 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 56

Conread position: 386-679
Cow position: chr27:28078844-28079149 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 47

Conread position: 4-113
Cow position: chr28:10497669-10497560 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 358-682
Cow position: chr28:6779926-6779585 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 359-507
Cow position: chr28:7880939-7881089 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 368-670
Cow position: chr28:8379261-8379579 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 71

Conread position: 377-679
Cow position: chr28:32791937-32791624 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 13

Conread position: 380-679
Cow position: chr28:2988803-2988487 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 0

Conread position: 380-679
Cow position: chr28:10071722-10072026 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 226

Conread position: 383-529
Cow position: chr28:29820177-29820322 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 63, 123

Conread position: 383-533
Cow position: chr28:8720855-8720705 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 383-534
Cow position: chr28:485126-484975 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 52

Conread position: 383-556
Cow position: chr28:10581542-10581370 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 50, 56

Conread position: 383-571
Cow position: chr28:2084035-2084220 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 163, 0

Conread position: 383-605
Cow position: chr28:34594421-34594660 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 184
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 158, 0

Conread position: 383-619
Cow position: chr28:782836-783087 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 191
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 50, 56

Conread position: 383-660
Cow position: chr28:7822694-7822988 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-663
Cow position: chr28:26425808-26425516 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 250

Conread position: 383-677
Cow position: chr28:7789510-7789198 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 100

Conread position: 383-679
Cow position: chr28:1167439-1167126 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr28:1505308-1505620 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 284

Conread position: 383-679
Cow position: chr28:5113855-5113545 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 383-679
Cow position: chr28:5566588-5566905 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 383-679
Cow position: chr28:7740922-7741222 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr28:12150746-12151056 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr28:12409785-12409475 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr28:13460412-13460724 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 87

Conread position: 383-679
Cow position: chr28:18520003-18519695 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 29

Conread position: 383-679
Cow position: chr28:22260708-22260401 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 58

Conread position: 383-682
Cow position: chr28:2724486-2724170 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr28:6538825-6538510 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 242

Conread position: 383-682
Cow position: chr28:14750982-14751295 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 47

Conread position: 384-534
Cow position: chr28:24668052-24668193 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 385-533
Cow position: chr28:3020305-3020161 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 385-682
Cow position: chr28:24589292-24589606 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 49

Conread position: 386-679
Cow position: chr28:1386959-1386650 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 228
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 89, 48

Conread position: 386-679
Cow position: chr28:7002435-7002746 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 303

Conread position: 387-679
Cow position: chr28:1814422-1814113 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 0

Conread position: 391-647
Cow position: chr28:5798192-5798463 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 196
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 22, 0

Conread position: 392-606
Cow position: chr28:7810951-7811165 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 105, 64

Conread position: 524-679
Cow position: chr28:7881846-7881695 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 541-681
Cow position: chr28:8720333-8720199 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 119
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 44, 0

Conread position: 357-644
Cow position: chr29:251149-251458 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 207
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 358-679
Cow position: chr29:10823586-10823258 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 90

Conread position: 380-654
Cow position: chr29:32540214-32540500 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 59

Conread position: 380-679
Cow position: chr29:14586321-14586638 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 59

Conread position: 383-516
Cow position: chr29:410117-409985 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 87, 0

Conread position: 383-615
Cow position: chr29:7844733-7844982 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 192
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 153, 0

Conread position: 383-621
Cow position: chr29:13582470-13582718 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 70

Conread position: 383-628
Cow position: chr29:23976244-23976505 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 35

Conread position: 383-654
Cow position: chr29:19622839-19622552 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 219

Conread position: 383-678
Cow position: chr29:38227388-38227693 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 383-679
Cow position: chr29:48064-47752 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr29:2690309-2690622 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr29:2840968-2840662 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 383-679
Cow position: chr29:5958008-5958318 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 87

Conread position: 383-679
Cow position: chr29:7430810-7430502 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr29:10647842-10647535 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 275

Conread position: 383-679
Cow position: chr29:14085726-14085414 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 84

Conread position: 383-679
Cow position: chr29:16022939-16023254 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 383-679
Cow position: chr29:20251567-20251880 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr29:25932134-25931822 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 87

Conread position: 383-679
Cow position: chr29:26164414-26164111 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr29:40502575-40502262 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 383-679
Cow position: chr29:43322962-43323275 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr29:45586959-45586646 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 383-682
Cow position: chr29:2100254-2100569 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 255

Conread position: 383-682
Cow position: chr29:16110817-16111097 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 213
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 157, 0

Conread position: 383-682
Cow position: chr29:18856541-18856226 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 64

Conread position: 383-682
Cow position: chr29:27249941-27249625 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr29:27980520-27980207 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 46

Conread position: 383-682
Cow position: chr29:35297272-35297571 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 157

Conread position: 385-549
Cow position: chr29:6266088-6265925 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 36, 0

Conread position: 385-679
Cow position: chr29:34799399-34799089 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 385-682
Cow position: chr29:669653-669340 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 45

Conread position: 385-682
Cow position: chr29:15894446-15894132 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 385-684
Cow position: chr29:9643349-9643042 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 220

Conread position: 413-679
Cow position: chr29:105474-105751 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 26

Conread position: 1-113
Cow position: chr3:52863909-52863798 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 14, 31

Conread position: 1-114
Cow position: chr3:3981974-3982087 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-117
Cow position: chr3:34030670-34030556 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 153-677
Cow position: chr3:4285888-4286429 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 383, 0

Conread position: 356-679
Cow position: chr3:53515904-53516244 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 332

Conread position: 357-534
Cow position: chr3:54341959-54341787 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 76, 0

Conread position: 358-678
Cow position: chr3:64650920-64651258 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 358-679
Cow position: chr3:45033034-45033378 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 358-679
Cow position: chr3:66620473-66620814 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 84

Conread position: 358-681
Cow position: chr3:68699678-68699332 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 335

Conread position: 358-682
Cow position: chr3:6782678-6783006 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 113

Conread position: 358-683
Cow position: chr3:14439467-14439129 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 283

Conread position: 369-681
Cow position: chr3:9402786-9402477 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 204
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 116, 199

Conread position: 376-534
Cow position: chr3:77424124-77424284 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 137, 0

Conread position: 376-537
Cow position: chr3:60208292-60208132 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 114, 0

Conread position: 378-679
Cow position: chr3:24643507-24643815 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 209
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 87, 72

Conread position: 379-534
Cow position: chr3:19721843-19721688 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 381-663
Cow position: chr3:46502858-46503155 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 0

Conread position: 383-553
Cow position: chr3:36881594-36881424 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 138
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 21, 58

Conread position: 383-571
Cow position: chr3:594903-595091 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 383-600
Cow position: chr3:48842491-48842721 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 178
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 157, 0

Conread position: 383-620
Cow position: chr3:29330951-29330697 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 198
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 57, 48

Conread position: 383-627
Cow position: chr3:1516475-1516736 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 197
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 153, 0

Conread position: 383-644
Cow position: chr3:23213751-23213473 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-654
Cow position: chr3:18542081-18541797 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 51

Conread position: 383-663
Cow position: chr3:21182361-21182074 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 51

Conread position: 383-676
Cow position: chr3:77443681-77443977 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 209
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 138, 61

Conread position: 383-679
Cow position: chr3:5953860-5953548 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 87

Conread position: 383-679
Cow position: chr3:5995375-5995062 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 223
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 107, 55

Conread position: 383-679
Cow position: chr3:10239980-10240291 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 229

Conread position: 383-679
Cow position: chr3:18811826-18812139 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 291

Conread position: 383-679
Cow position: chr3:23290014-23289703 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 55

Conread position: 383-679
Cow position: chr3:29578953-29579256 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 225

Conread position: 383-679
Cow position: chr3:30314879-30315194 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr3:34030572-34030262 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr3:40339792-40339482 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 383-679
Cow position: chr3:40823713-40824022 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr3:49678118-49678433 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 87

Conread position: 383-679
Cow position: chr3:50915652-50915964 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 69

Conread position: 383-681
Cow position: chr3:2917780-2918094 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 303

Conread position: 383-681
Cow position: chr3:36117982-36118295 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 77

Conread position: 383-682
Cow position: chr3:7158396-7158091 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 236
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 55, 47

Conread position: 383-682
Cow position: chr3:18859733-18860046 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 16

Conread position: 383-682
Cow position: chr3:19736900-19737216 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 383-682
Cow position: chr3:19878977-19879288 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 222

Conread position: 383-682
Cow position: chr3:20380863-20381176 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 383-682
Cow position: chr3:22336208-22336524 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr3:24314787-24315102 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 52

Conread position: 383-682
Cow position: chr3:32622717-32622409 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 0

Conread position: 383-682
Cow position: chr3:41211415-41211100 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 276

Conread position: 383-682
Cow position: chr3:46679751-46680063 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 87

Conread position: 383-682
Cow position: chr3:51242692-51243006 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr3:66890643-66890330 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 222

Conread position: 383-684
Cow position: chr3:59861692-59862009 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 311

Conread position: 384-575
Cow position: chr3:3055001-3055198 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 115, 14

Conread position: 384-679
Cow position: chr3:18463246-18462937 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 137

Conread position: 385-510
Cow position: chr3:74439625-74439750 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 385-534
Cow position: chr3:4028070-4028214 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 385-679
Cow position: chr3:19756629-19756318 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 54

Conread position: 385-682
Cow position: chr3:46860981-46860668 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 220

Conread position: 385-682
Cow position: chr3:47081089-47080778 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 264

Conread position: 385-682
Cow position: chr3:64027764-64027450 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 385-682
Cow position: chr3:68873432-68873120 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 287

Conread position: 385-684
Cow position: chr3:2907440-2907135 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 9

Conread position: 386-679
Cow position: chr3:42432561-42432852 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 137

Conread position: 386-679
Cow position: chr3:75040840-75040530 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 386-682
Cow position: chr3:72630397-72630709 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 53

Conread position: 387-682
Cow position: chr3:3523345-3523655 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 61

Conread position: 398-679
Cow position: chr3:50127316-50127002 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 226
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 65, 0

Conread position: 531-679
Cow position: chr3:42447590-42447738 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 4-110
Cow position: chr4:21256382-21256488 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 358-677
Cow position: chr4:51043149-51042817 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 236
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 19, 86

Conread position: 358-681
Cow position: chr4:100835-100495 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 330

Conread position: 358-681
Cow position: chr4:57984086-57984427 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 358-682
Cow position: chr4:5880264-5880606 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 375-679
Cow position: chr4:31669395-31669713 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 0

Conread position: 376-646
Cow position: chr4:45049174-45048887 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 63

Conread position: 376-679
Cow position: chr4:25599378-25599058 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 63

Conread position: 381-684
Cow position: chr4:356038-356351 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 44

Conread position: 382-586
Cow position: chr4:6268504-6268283 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 154, 0

Conread position: 383-498
Cow position: chr4:33493956-33494071 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 383-593
Cow position: chr4:28831471-28831687 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 157, 0

Conread position: 383-634
Cow position: chr4:17926123-17925855 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-650
Cow position: chr4:44725216-44725499 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 119

Conread position: 383-678
Cow position: chr4:6490233-6489926 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-678
Cow position: chr4:12241086-12240772 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 36

Conread position: 383-678
Cow position: chr4:43881240-43881542 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr4:26886730-26886417 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr4:36896499-36896810 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr4:46664647-46664959 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr4:48026528-48026840 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 237

Conread position: 383-679
Cow position: chr4:60264033-60263725 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 220

Conread position: 383-682
Cow position: chr4:3125920-3126232 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 219

Conread position: 383-682
Cow position: chr4:16056725-16057040 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 225

Conread position: 383-682
Cow position: chr4:16326650-16326334 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr4:18190530-18190835 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 216
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 173, 158

Conread position: 383-682
Cow position: chr4:18424400-18424085 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 236

Conread position: 384-610
Cow position: chr4:41120448-41120691 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 188
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 158, 0

Conread position: 384-679
Cow position: chr4:43319514-43319206 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 276

Conread position: 385-504
Cow position: chr4:12587432-12587551 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 385-679
Cow position: chr4:16360015-16360310 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 274

Conread position: 385-679
Cow position: chr4:33072694-33072383 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 54

Conread position: 385-682
Cow position: chr4:41954600-41954911 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 0

Conread position: 385-682
Cow position: chr4:41958255-41958566 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 0

Conread position: 385-683
Cow position: chr4:32212294-32212609 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 386-679
Cow position: chr4:13493445-13493756 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 53

Conread position: 393-681
Cow position: chr4:529533-529838 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 295

Conread position: 399-678
Cow position: chr4:159296-159594 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 434-679
Cow position: chr4:27301276-27301031 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 7, 164

Conread position: 1-117
Cow position: chr5:29435447-29435331 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-117
Cow position: chr5:41528634-41528518 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-117
Cow position: chr5:45700393-45700509 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 100
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 357-518
Cow position: chr5:29761757-29761912 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 25

Conread position: 358-630
Cow position: chr5:41528560-41528275 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 209
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 0

Conread position: 358-679
Cow position: chr5:10776071-10775735 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 245

Conread position: 358-679
Cow position: chr5:55628186-55628524 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 0

Conread position: 358-682
Cow position: chr5:241395-241737 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 358-682
Cow position: chr5:46776272-46776614 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 365-660
Cow position: chr5:32772694-32773003 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 96

Conread position: 365-684
Cow position: chr5:30579536-30579866 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 14

Conread position: 373-682
Cow position: chr5:14785153-14784826 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 80

Conread position: 376-599
Cow position: chr5:46660255-46660486 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 160, 14

Conread position: 376-679
Cow position: chr5:4069433-4069753 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 0

Conread position: 376-682
Cow position: chr5:54792421-54792101 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 0

Conread position: 380-679
Cow position: chr5:3503882-3503583 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 59

Conread position: 380-679
Cow position: chr5:57482322-57482006 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 0

Conread position: 380-679
Cow position: chr5:64781795-64781482 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 241

Conread position: 381-512
Cow position: chr5:49119056-49118927 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 89, 0

Conread position: 382-611
Cow position: chr5:26067671-26067445 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 116, 129

Conread position: 383-497
Cow position: chr5:6154995-6154881 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 50, 56

Conread position: 383-515
Cow position: chr5:59144590-59144723 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 383-627
Cow position: chr5:46644902-46645158 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 153, 0

Conread position: 383-643
Cow position: chr5:10483067-10483344 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-662
Cow position: chr5:26084356-26084068 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 157, 182

Conread position: 383-676
Cow position: chr5:27002253-27002547 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 193
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 201, 55

Conread position: 383-679
Cow position: chr5:3786151-3786455 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr5:4385468-4385776 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 60

Conread position: 383-679
Cow position: chr5:6588801-6588489 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 51

Conread position: 383-679
Cow position: chr5:24098893-24099205 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 74

Conread position: 383-679
Cow position: chr5:31706793-31707083 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 0

Conread position: 383-679
Cow position: chr5:46738353-46738041 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 117

Conread position: 383-679
Cow position: chr5:48808509-48808206 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 227

Conread position: 383-679
Cow position: chr5:73489335-73489025 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-682
Cow position: chr5:2531479-2531790 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 383-682
Cow position: chr5:3964669-3964984 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 222

Conread position: 383-682
Cow position: chr5:27909053-27908737 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr5:35300318-35300634 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 47

Conread position: 383-682
Cow position: chr5:44459702-44460018 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr5:59060837-59061149 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 384-679
Cow position: chr5:31101400-31101092 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 122

Conread position: 385-679
Cow position: chr5:37732573-37732884 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 385-681
Cow position: chr5:4018978-4018667 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 268

Conread position: 385-682
Cow position: chr5:23960094-23959780 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 45

Conread position: 385-682
Cow position: chr5:48468058-48467745 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 50

Conread position: 385-683
Cow position: chr5:18122248-18121940 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 85

Conread position: 386-679
Cow position: chr5:2914677-2914982 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 64

Conread position: 398-678
Cow position: chr5:28011889-28012187 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 398-679
Cow position: chr5:41465273-41465562 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 143, 0

Conread position: 402-679
Cow position: chr5:49591853-49591563 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 212
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 24, 287

Conread position: 418-679
Cow position: chr5:41961465-41961191 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 1-117
Cow position: chr6:8021193-8021309 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 356-619
Cow position: chr6:3277612-3277342 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 42

Conread position: 356-622
Cow position: chr6:68027121-68027407 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 212
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 17, 0

Conread position: 356-682
Cow position: chr6:40251994-40252337 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 358-533
Cow position: chr6:65881247-65881423 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 15, 0

Conread position: 358-652
Cow position: chr6:52693365-52693675 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 76

Conread position: 363-571
Cow position: chr6:10500641-10500848 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 70, 76

Conread position: 365-679
Cow position: chr6:66541989-66542316 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 228
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 24, 100

Conread position: 368-682
Cow position: chr6:17597944-17597615 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 318

Conread position: 373-671
Cow position: chr6:538354-538656 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 203
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 45

Conread position: 375-594
Cow position: chr6:14852224-14851988 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 161, 0

Conread position: 376-679
Cow position: chr6:30479464-30479779 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 296

Conread position: 376-679
Cow position: chr6:35876355-35876039 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 0

Conread position: 376-679
Cow position: chr6:47042838-47042524 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 203

Conread position: 379-672
Cow position: chr6:28275345-28275650 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 383-553
Cow position: chr6:55543958-55543790 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 138
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 50, 56

Conread position: 383-563
Cow position: chr6:8202104-8202282 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 159, 0

Conread position: 383-619
Cow position: chr6:15280188-15279942 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 17

Conread position: 383-623
Cow position: chr6:64715597-64715848 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 187
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 153, 237

Conread position: 383-631
Cow position: chr6:39437914-39438172 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-634
Cow position: chr6:1411582-1411314 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 203
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 56, 48

Conread position: 383-669
Cow position: chr6:51086307-51086609 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-678
Cow position: chr6:5949413-5949101 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr6:3889117-3888807 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr6:7178913-7178596 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 219
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 67, 226

Conread position: 383-679
Cow position: chr6:10643914-10644213 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 383-679
Cow position: chr6:15140816-15140508 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 17

Conread position: 383-679
Cow position: chr6:17046421-17046732 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 299

Conread position: 383-679
Cow position: chr6:20560745-20560433 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 270

Conread position: 383-679
Cow position: chr6:24239422-24239731 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 100

Conread position: 383-679
Cow position: chr6:27470966-27471276 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr6:27529640-27529331 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 230

Conread position: 383-679
Cow position: chr6:34892638-34892326 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr6:44150195-44149882 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr6:65841953-65842256 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 80

Conread position: 383-679
Cow position: chr6:65928331-65928642 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 229
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 153, 226

Conread position: 383-682
Cow position: chr6:186108-185792 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr6:331105-330789 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr6:2375062-2375375 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 47

Conread position: 383-682
Cow position: chr6:7141102-7140785 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 47

Conread position: 383-682
Cow position: chr6:16052240-16052557 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 383-682
Cow position: chr6:24323020-24322704 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 383-682
Cow position: chr6:26670506-26670189 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 143

Conread position: 383-682
Cow position: chr6:39908888-39909204 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 48

Conread position: 383-682
Cow position: chr6:40275449-40275764 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 52

Conread position: 383-682
Cow position: chr6:43618076-43618392 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr6:69221849-69221533 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 384-636
Cow position: chr6:36526417-36526683 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 55

Conread position: 385-632
Cow position: chr6:40867192-40866933 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 39

Conread position: 385-635
Cow position: chr6:30274809-30274547 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 54

Conread position: 385-669
Cow position: chr6:43793347-43793045 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 223
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 27, 39

Conread position: 385-679
Cow position: chr6:1822264-1821953 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 385-679
Cow position: chr6:6566976-6567262 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 224
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 149, 40

Conread position: 385-680
Cow position: chr6:38233203-38233508 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 29

Conread position: 385-682
Cow position: chr6:13847389-13847703 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 386-617
Cow position: chr6:11274550-11274308 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 150, 75

Conread position: 386-672
Cow position: chr6:65914564-65914865 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 221
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 150, 61

Conread position: 386-682
Cow position: chr6:29311862-29312175 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 387-614
Cow position: chr6:40813301-40813057 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 185
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 149, 0

Conread position: 387-684
Cow position: chr6:40315754-40316063 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 217

Conread position: 388-675
Cow position: chr6:34005013-34004728 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 199
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 148, 54

Conread position: 389-682
Cow position: chr6:12665952-12665643 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 72

Conread position: 391-610
Cow position: chr6:58027123-58027358 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 142, 226

Conread position: 398-534
Cow position: chr6:26044926-26045063 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 412-679
Cow position: chr6:40973673-40973952 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 529-679
Cow position: chr6:65881736-65881886 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 532-679
Cow position: chr6:41804396-41804542 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 122
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 15, 0

Conread position: 1-114
Cow position: chr7:55279987-55279874 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-117
Cow position: chr7:39107562-39107446 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 358-682
Cow position: chr7:20515347-20515009 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 73

Conread position: 370-623
Cow position: chr7:67428379-67428648 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 122, 9

Conread position: 375-671
Cow position: chr7:1450819-1451114 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 219
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 107, 103

Conread position: 376-679
Cow position: chr7:6489637-6489957 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 230
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 159, 22

Conread position: 376-679
Cow position: chr7:21929591-21929914 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 376-679
Cow position: chr7:48634883-48635202 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 231
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 159, 94

Conread position: 380-654
Cow position: chr7:446179-445890 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 127

Conread position: 380-682
Cow position: chr7:994971-995283 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 189

Conread position: 381-670
Cow position: chr7:3155696-3156003 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 228

Conread position: 383-515
Cow position: chr7:19924369-19924235 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 383-534
Cow position: chr7:5183863-5184011 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 383-558
Cow position: chr7:29369840-29369669 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 68, 85

Conread position: 383-586
Cow position: chr7:3234232-3234016 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 153, 104

Conread position: 383-596
Cow position: chr7:34149556-34149786 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 177
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 153, 0

Conread position: 383-617
Cow position: chr7:21985859-21986110 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 194
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 157, 0

Conread position: 383-619
Cow position: chr7:64241335-64241083 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 193
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 153, 209

Conread position: 383-622
Cow position: chr7:11466319-11466074 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 115, 106

Conread position: 383-634
Cow position: chr7:5662826-5663084 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 383-644
Cow position: chr7:60463600-60463878 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-677
Cow position: chr7:68481011-68481315 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 144, 113

Conread position: 383-679
Cow position: chr7:1372190-1371881 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr7:8144787-8144474 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr7:14139143-14138830 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr7:21127207-21126898 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 200

Conread position: 383-679
Cow position: chr7:21234554-21234249 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 214

Conread position: 383-679
Cow position: chr7:24808000-24807691 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr7:27787088-27787399 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 87

Conread position: 383-679
Cow position: chr7:33405784-33405476 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr7:34486372-34486679 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 232

Conread position: 383-679
Cow position: chr7:46901623-46901308 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 15

Conread position: 383-679
Cow position: chr7:51014726-51015029 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 197

Conread position: 383-679
Cow position: chr7:59679304-59679614 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 101

Conread position: 383-679
Cow position: chr7:67799308-67799599 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 0

Conread position: 383-682
Cow position: chr7:16421-16106 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 48

Conread position: 383-682
Cow position: chr7:6648205-6647890 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 193

Conread position: 383-682
Cow position: chr7:20798995-20798676 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 265

Conread position: 383-682
Cow position: chr7:21320607-21320923 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr7:25439961-25440277 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr7:61559664-61559980 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr7:61808683-61808999 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 383-682
Cow position: chr7:65811288-65811600 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 385-534
Cow position: chr7:53991655-53991810 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 385-627
Cow position: chr7:20821166-20821414 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 102, 82

Conread position: 385-679
Cow position: chr7:10430965-10430654 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 385-682
Cow position: chr7:11447010-11447324 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 386-679
Cow position: chr7:25250560-25250871 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 215
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 119, 126

Conread position: 391-679
Cow position: chr7:33072821-33072528 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 145, 0

Conread position: 540-675
Cow position: chr7:59683814-59683946 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 1-113
Cow position: chr8:24419662-24419550 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-116
Cow position: chr8:38606654-38606538 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 1-117
Cow position: chr8:23771179-23771295 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 103
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-117
Cow position: chr8:33430945-33431061 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 357-679
Cow position: chr8:42160800-42160474 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 97

Conread position: 358-534
Cow position: chr8:44694430-44694606 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 121

Conread position: 358-649
Cow position: chr8:11821931-11822229 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 218
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 17, 95

Conread position: 358-679
Cow position: chr8:33588993-33589327 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 358-682
Cow position: chr8:37931703-37932045 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 78

Conread position: 374-679
Cow position: chr8:46050818-46051139 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 65

Conread position: 376-671
Cow position: chr8:44074872-44074573 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 376-679
Cow position: chr8:11762576-11762891 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 23

Conread position: 376-679
Cow position: chr8:19330373-19330693 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 0

Conread position: 376-682
Cow position: chr8:6065137-6064820 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 248

Conread position: 379-679
Cow position: chr8:25523046-25523359 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 59

Conread position: 382-678
Cow position: chr8:19051122-19051427 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 15

Conread position: 383-508
Cow position: chr8:8229136-8229012 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 383-533
Cow position: chr8:45797677-45797527 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 383-650
Cow position: chr8:38391011-38391291 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 15

Conread position: 383-677
Cow position: chr8:11969639-11969333 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 50

Conread position: 383-678
Cow position: chr8:42419792-42419486 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 88

Conread position: 383-679
Cow position: chr8:2170733-2170421 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 383-679
Cow position: chr8:3856370-3856063 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr8:4687040-4687354 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 383-679
Cow position: chr8:5016826-5017131 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 383-679
Cow position: chr8:7161536-7161849 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr8:8401471-8401163 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 217

Conread position: 383-679
Cow position: chr8:8911150-8911460 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr8:10742986-10742663 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 126, 0

Conread position: 383-679
Cow position: chr8:11802465-11802773 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 11

Conread position: 383-679
Cow position: chr8:12449592-12449905 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 125

Conread position: 383-679
Cow position: chr8:14591259-14590950 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 10

Conread position: 383-679
Cow position: chr8:14928240-14927927 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr8:17311664-17311975 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr8:23771279-23771589 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr8:24419562-24419269 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 144

Conread position: 383-679
Cow position: chr8:24915697-24915384 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr8:32318912-32318599 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr8:36635900-36635590 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chr8:39195572-39195256 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 58

Conread position: 383-679
Cow position: chr8:49215079-49215393 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 383-679
Cow position: chr8:50930486-50930178 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr8:50994430-50994727 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 80

Conread position: 383-682
Cow position: chr8:1153671-1153355 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 383-682
Cow position: chr8:6684085-6684401 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr8:8517945-8517632 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 222

Conread position: 383-682
Cow position: chr8:8556509-8556193 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 52

Conread position: 383-682
Cow position: chr8:15711778-15711462 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 383-682
Cow position: chr8:22571672-22571355 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 383-682
Cow position: chr8:27579035-27579351 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr8:30891677-30891361 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 17

Conread position: 383-682
Cow position: chr8:34348316-34348628 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 383-682
Cow position: chr8:47069168-47068852 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 384-679
Cow position: chr8:47661679-47661368 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 55

Conread position: 385-534
Cow position: chr8:41646083-41645934 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 48

Conread position: 385-641
Cow position: chr8:58186571-58186298 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 59, 48

Conread position: 385-679
Cow position: chr8:25408371-25408682 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 54

Conread position: 385-679
Cow position: chr8:42484559-42484868 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 293

Conread position: 385-679
Cow position: chr8:60061023-60061335 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 385-680
Cow position: chr8:30487739-30487430 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 288

Conread position: 385-682
Cow position: chr8:1319684-1319997 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 385-682
Cow position: chr8:32631387-32631073 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 49

Conread position: 386-679
Cow position: chr8:45449121-45449436 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 150, 224

Conread position: 386-679
Cow position: chr8:50288280-50287971 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 53

Conread position: 386-682
Cow position: chr8:2886391-2886703 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 216

Conread position: 443-673
Cow position: chr8:59141024-59141272 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 32, 0

Conread position: 347-682
Cow position: chr9:222276-221922 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 348-679
Cow position: chr9:6249554-6249903 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 23

Conread position: 358-679
Cow position: chr9:51181919-51181582 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 63

Conread position: 358-679
Cow position: chr9:59426039-59426372 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 90

Conread position: 358-682
Cow position: chr9:130925-130581 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 358-682
Cow position: chr9:45873611-45873949 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 103

Conread position: 367-680
Cow position: chr9:30487850-30488177 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 226
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 166, 22

Conread position: 376-679
Cow position: chr9:16176057-16176375 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 62

Conread position: 376-679
Cow position: chr9:37162525-37162210 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 378-684
Cow position: chr9:25187389-25187715 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 92

Conread position: 379-643
Cow position: chr9:828835-828572 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 138, 55

Conread position: 379-682
Cow position: chr9:59173860-59173539 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 380-627
Cow position: chr9:13476593-13476328 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 148, 0

Conread position: 380-679
Cow position: chr9:22653860-22654176 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 0

Conread position: 381-679
Cow position: chr9:4532786-4533100 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 58

Conread position: 381-679
Cow position: chr9:42309976-42310289 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 58

Conread position: 383-515
Cow position: chr9:16268662-16268794 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 383-525
Cow position: chr9:25754933-25754792 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 43, 52

Conread position: 383-527
Cow position: chr9:37970914-37970770 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 119
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 383-532
Cow position: chr9:25023007-25022858 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 383-534
Cow position: chr9:49177537-49177386 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 383-556
Cow position: chr9:6050752-6050583 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 50, 17

Conread position: 383-600
Cow position: chr9:7003079-7003300 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 0

Conread position: 383-633
Cow position: chr9:3566545-3566278 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 383-634
Cow position: chr9:31064723-31064991 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 47

Conread position: 383-635
Cow position: chr9:44795568-44795823 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 192
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 150, 202

Conread position: 383-648
Cow position: chr9:31807861-31808143 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-654
Cow position: chr9:10322096-10322383 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-675
Cow position: chr9:30672663-30672965 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-677
Cow position: chr9:3543135-3543446 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-678
Cow position: chr9:14762153-14761853 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 229
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 56, 11

Conread position: 383-679
Cow position: chr9:18509506-18509195 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 383-679
Cow position: chr9:27034976-27035286 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 383-679
Cow position: chr9:32969241-32969554 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chr9:36724792-36725105 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 78

Conread position: 383-679
Cow position: chr9:42569197-42569508 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 101

Conread position: 383-679
Cow position: chr9:44818473-44818776 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 226
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 56, 48

Conread position: 383-679
Cow position: chr9:47002486-47002799 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-681
Cow position: chr9:60277726-60277410 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr9:1251704-1251391 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 78

Conread position: 383-682
Cow position: chr9:27934378-27934694 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chr9:28440099-28440414 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 78

Conread position: 383-682
Cow position: chr9:28678263-28678576 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 47

Conread position: 383-682
Cow position: chr9:30826971-30827283 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 40

Conread position: 383-682
Cow position: chr9:51210972-51211288 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-684
Cow position: chr9:3803634-3803956 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 235
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 149, 227

Conread position: 384-534
Cow position: chr9:7061797-7061647 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 123
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 384-682
Cow position: chr9:3005953-3005641 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 47

Conread position: 385-650
Cow position: chr9:59454968-59454691 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 206
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 151, 112

Conread position: 385-679
Cow position: chr9:9013397-9013704 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 13

Conread position: 385-682
Cow position: chr9:780512-780199 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 46

Conread position: 385-682
Cow position: chr9:2053060-2053362 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 214
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 51, 47

Conread position: 386-650
Cow position: chr9:29027905-29027627 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 53

Conread position: 386-679
Cow position: chr9:5514718-5515026 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 220
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 74, 180

Conread position: 387-682
Cow position: chr9:5004279-5004581 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 52

Conread position: 391-679
Cow position: chr9:59536395-59536700 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 0

Conread position: 405-682
Cow position: chr9:4943500-4943205 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 29

Conread position: 471-679
Cow position: chr9:2209676-2209894 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 60, 137

Conread position: 1-90
Cow position: chrX:24275774-24275863 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 77
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-114
Cow position: chrX:44387224-44387337 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-115
Cow position: chrX:13053128-13053237 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 2-115
Cow position: chrX:29794015-29793907 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 2-117
Cow position: chrX:40246777-40246662 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 356-678
Cow position: chrX:13412964-13412624 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 357-538
Cow position: chrX:1942574-1942394 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 20, 75

Conread position: 357-682
Cow position: chrX:31493589-31493930 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 232

Conread position: 358-518
Cow position: chrX:28758471-28758310 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 358-532
Cow position: chrX:12803694-12803520 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 19, 151

Conread position: 358-534
Cow position: chrX:22130067-22129891 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 19, 121

Conread position: 358-534
Cow position: chrX:22619138-22618961 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 74

Conread position: 358-592
Cow position: chrX:2102029-2102280 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 189
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 19, 66

Conread position: 358-638
Cow position: chrX:24089571-24089870 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 220
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 18, 92

Conread position: 358-645
Cow position: chrX:5394830-5394526 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 19, 74

Conread position: 358-657
Cow position: chrX:7093768-7094085 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 358-679
Cow position: chrX:9008508-9008844 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 248

Conread position: 358-679
Cow position: chrX:29285615-29285949 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 77

Conread position: 358-682
Cow position: chrX:6872903-6872561 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 358-682
Cow position: chrX:37849185-37849525 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 142

Conread position: 358-682
Cow position: chrX:39563761-39563422 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 279

Conread position: 369-578
Cow position: chrX:30178804-30178579 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 148, 31

Conread position: 375-679
Cow position: chrX:30183699-30183409 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 64

Conread position: 376-679
Cow position: chrX:31198636-31198959 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 380-511
Cow position: chrX:5299024-5298893 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 102, 98

Conread position: 380-679
Cow position: chrX:26528175-26528487 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 20

Conread position: 380-679
Cow position: chrX:29853369-29853056 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 90

Conread position: 382-626
Cow position: chrX:3407618-3407361 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 152, 205

Conread position: 382-679
Cow position: chrX:2482434-2482121 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 57

Conread position: 383-515
Cow position: chrX:8454948-8455081 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 92, 0

Conread position: 383-523
Cow position: chrX:5833235-5833095 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 383-534
Cow position: chrX:16237979-16238130 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 383-537
Cow position: chrX:30056856-30057010 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 56, 50

Conread position: 383-571
Cow position: chrX:30366972-30366789 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 383-583
Cow position: chrX:13397924-13397707 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 57, 48

Conread position: 383-617
Cow position: chrX:18219593-18219845 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 190
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 153, 0

Conread position: 383-619
Cow position: chrX:23391396-23391144 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 194
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 153, 0

Conread position: 383-621
Cow position: chrX:14594967-14595222 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 196
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 153, 0

Conread position: 383-630
Cow position: chrX:29950388-29950121 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 17, 0

Conread position: 383-654
Cow position: chrX:2536251-2535965 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 215
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 92, 226

Conread position: 383-672
Cow position: chrX:27426124-27425818 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-675
Cow position: chrX:27495120-27495425 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 383-678
Cow position: chrX:5336290-5335978 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 48

Conread position: 383-679
Cow position: chrX:320666-320979 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 383-679
Cow position: chrX:970971-971284 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 383-679
Cow position: chrX:1547177-1547488 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 289

Conread position: 383-679
Cow position: chrX:16699503-16699816 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chrX:18659586-18659279 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 232

Conread position: 383-679
Cow position: chrX:20720186-20720499 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position: chrX:21490393-21490694 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 184

Conread position: 383-679
Cow position: chrX:21829727-21830040 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position: chrX:23277222-23277537 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 101

Conread position: 383-679
Cow position: chrX:26758404-26758102 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 247

Conread position: 383-679
Cow position: chrX:26766996-26766698 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 217

Conread position: 383-679
Cow position: chrX:28651347-28651039 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 114

Conread position: 383-679
Cow position: chrX:29096404-29096714 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 276

Conread position: 383-679
Cow position: chrX:29885189-29885501 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 228

Conread position: 383-679
Cow position: chrX:41850997-41850686 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 223

Conread position: 383-681
Cow position: chrX:12280074-12279762 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 47

Conread position: 383-681
Cow position: chrX:16362928-16362614 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 304

Conread position: 383-681
Cow position: chrX:30711786-30712100 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 209

Conread position: 383-682
Cow position: chrX:1834014-1834330 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chrX:2604244-2604559 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 48

Conread position: 383-682
Cow position: chrX:5863594-5863906 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 87

Conread position: 383-682
Cow position: chrX:7481828-7482144 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 48

Conread position: 383-682
Cow position: chrX:8479846-8480162 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chrX:8588374-8588690 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chrX:10531362-10531046 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 383-682
Cow position: chrX:12288198-12287891 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 383-682
Cow position: chrX:12353436-12353752 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 47

Conread position: 383-682
Cow position: chrX:12654564-12654250 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 52

Conread position: 383-682
Cow position: chrX:15980754-15980445 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 216

Conread position: 383-682
Cow position: chrX:20315866-20315550 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chrX:22611143-22611455 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 47

Conread position: 383-682
Cow position: chrX:26399981-26399669 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 383-682
Cow position: chrX:28585176-28585491 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 52

Conread position: 383-682
Cow position: chrX:29911229-29910913 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chrX:30011235-30011551 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chrX:35530058-35530374 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position: chrX:37812357-37812674 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-684
Cow position: chrX:23019526-23019842 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 303

Conread position: 384-679
Cow position: chrX:17667695-17667373 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 230
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 141, 0

Conread position: 384-679
Cow position: chrX:21589171-21589477 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 263

Conread position: 384-679
Cow position: chrX:23040923-23040613 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 62

Conread position: 385-503
Cow position: chrX:22814594-22814712 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 91
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 385-652
Cow position: chrX:19874033-19874299 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 144, 39

Conread position: 385-679
Cow position: chrX:15127038-15126727 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 54

Conread position: 385-679
Cow position: chrX:30231897-30231589 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 54

Conread position: 385-680
Cow position: chrX:29793919-29793612 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 0

Conread position: 386-679
Cow position: chrX:21223127-21223435 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 386-679
Cow position: chrX:28553847-28554125 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 121, 0

Conread position: 389-682
Cow position: chrX:32066960-32066653 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 216

Conread position: 391-671
Cow position: chrX:21269832-21269555 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 35, 45

Conread position: 412-682
Cow position: chrX:16275875-16276161 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 413-679
Cow position: chrX:27960781-27961067 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 20

Conread position: 520-679
Cow position: chrX:22816199-22816358 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0