Cow genome map
| Conread name: | Ova1-OVRM10023D12 |
| Conread position: | 3-417 |
| Cow position: | chr1:73763090-73763505 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 87 |
| Conread position: | 3-421 |
| Cow position: | chr1:56166033-56165619 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 85 |
| Conread position: | 4-421 |
| Cow position: | chr1:85824952-85824575 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 281 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 58, 79 |
| Conread position: | 12-427 |
| Cow position: | chr1:101832906-101832501 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 409, 63 |
| Conread position: | 36-419 |
| Cow position: | chr1:10011847-10012210 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 329, 48 |
| Conread position: | 124-421 |
| Cow position: | chr1:16215110-16215399 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 83, 16 |
| Conread position: | 280-421 |
| Cow position: | chr1:32911089-32910951 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 89-417 |
| Cow position: | chr11:58138503-58138176 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 3-421 |
| Cow position: | chr13:21837973-21838386 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 129 |
| Conread position: | 7-421 |
| Cow position: | chr13:41338422-41338822 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 347, 75 |
| Conread position: | 7-421 |
| Cow position: | chr13:50111706-50111286 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 0 |
| Conread position: | 8-421 |
| Cow position: | chr13:7049877-7049474 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 1-430 |
| Cow position: | chr14:43557075-43556644 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 136 |
| Conread position: | 43-421 |
| Cow position: | chr14:33713145-33712778 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 56 |
| Conread position: | 3-421 |
| Cow position: | chr15:5009521-5009937 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 3-421 |
| Cow position: | chr15:13429938-13429521 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 329, 154 |
| Conread position: | 7-421 |
| Cow position: | chr15:4387865-4387452 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 85 |
| Conread position: | 3-421 |
| Cow position: | chr16:51402083-51402528 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 87, 75 |
| Conread position: | 3-440 |
| Cow position: | chr16:818479-818033 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 26 |
| Conread position: | 10-430 |
| Cow position: | chr16:31586937-31587362 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 19 |
| Conread position: | 3-427 |
| Cow position: | chr17:8204261-8203850 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 88 |
| Conread position: | 22-420 |
| Cow position: | chr17:5999172-5999572 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 75 |
| Conread position: | 31-428 |
| Cow position: | chr18:33344647-33344267 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 272 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 324, 59 |
| Conread position: | 3-427 |
| Cow position: | chr19:7481380-7481801 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 420, 259 |
| Conread position: | 3-420 |
| Cow position: | chr2:45937713-45938125 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 76 |
| Conread position: | 31-420 |
| Cow position: | chr2:56896484-56896870 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 66 |
| Conread position: | 59-422 |
| Cow position: | chr2:26872000-26871634 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 60 |
| Conread position: | 253-421 |
| Cow position: | chr2:46048485-46048649 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 21-421 |
| Cow position: | chr20:19342315-19341912 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 312, 0 |
| Conread position: | 214-421 |
| Cow position: | chr20:31079310-31079103 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 334-427 |
| Cow position: | chr20:7570044-7570138 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 43-420 |
| Cow position: | chr21:21171709-21172080 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 47 |
| Conread position: | 53-421 |
| Cow position: | chr21:362312-361942 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 70 |
| Conread position: | 3-419 |
| Cow position: | chr22:43303799-43304213 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 26, 123 |
| Conread position: | 3-421 |
| Cow position: | chr22:8735260-8735674 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 389, 111 |
| Conread position: | 6-419 |
| Cow position: | chr22:3275894-3276307 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-435 |
| Cow position: | chr22:1267329-1267735 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 64 |
| Conread position: | 74-427 |
| Cow position: | chr23:8099666-8099322 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 22 |
| Conread position: | 3-421 |
| Cow position: | chr24:6440295-6439877 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-421 |
| Cow position: | chr28:24591369-24590944 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 329, 373 |
| Conread position: | 19-419 |
| Cow position: | chr28:15352613-15353000 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 92-419 |
| Cow position: | chr29:17976843-17976520 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 12, 92 |
| Conread position: | 4-421 |
| Cow position: | chr3:46858905-46859322 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 213 |
| Conread position: | 37-419 |
| Cow position: | chr3:64427881-64428256 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 42 |
| Conread position: | 60-420 |
| Cow position: | chr3:72108491-72108851 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 156 |
| Conread position: | 3-420 |
| Cow position: | chr4:605809-605392 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 259-421 |
| Cow position: | chr4:5442888-5443050 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-421 |
| Cow position: | chr5:4683511-4683928 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 0 |
| Conread position: | 3-421 |
| Cow position: | chr5:42507048-42506624 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 214 |
| Conread position: | 3-427 |
| Cow position: | chr5:5925675-5926100 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 420, 0 |
| Conread position: | 7-421 |
| Cow position: | chr5:10854534-10854946 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 77 |
| Conread position: | 33-422 |
| Cow position: | chr5:41066438-41066049 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 296-421 |
| Cow position: | chr5:47828682-47828807 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-421 |
| Cow position: | chr7:8464-8051 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 3-421 |
| Cow position: | chr7:6626857-6627275 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-429 |
| Cow position: | chr7:113131-112703 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 79 |
| Conread position: | 82-420 |
| Cow position: | chr7:26784955-26784632 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 31, 14 |
| Conread position: | 52-420 |
| Cow position: | chr8:11764605-11764239 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |