Cow genome map
| Conread name: | Ova1-OVRM10104B04 |
| Conread position: | 19-227 |
| Cow position: | chr1:44137669-44137470 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 29-289 |
| Cow position: | chr1:31421899-31421646 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 29-399 |
| Cow position: | chr1:15026358-15026730 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 29, 109 |
| Conread position: | 34-377 |
| Cow position: | chr1:98864746-98864392 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 64, 233 |
| Conread position: | 48-373 |
| Cow position: | chr1:33389145-33389466 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 237 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 94, 32 |
| Conread position: | 48-377 |
| Cow position: | chr1:44101344-44101019 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 83 |
| Conread position: | 53-377 |
| Cow position: | chr1:38396626-38396922 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 236 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 75-383 |
| Cow position: | chr1:73011158-73011465 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 226, 52 |
| Conread position: | 75-662 |
| Cow position: | chr1:31330328-31329728 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 421 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 225, 36 |
| Conread position: | 47-204 |
| Cow position: | chr10:21076820-21076973 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 50-386 |
| Cow position: | chr10:24977703-24977383 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 196 |
| Conread position: | 50-393 |
| Cow position: | chr10:6260352-6260019 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 106 |
| Conread position: | 51-377 |
| Cow position: | chr10:64302707-64302388 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 95 |
| Conread position: | 69-299 |
| Cow position: | chr10:64288601-64288381 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 208, 79 |
| Conread position: | 80-617 |
| Cow position: | chr10:28116009-28115457 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 45 |
| Conread position: | 179-681 |
| Cow position: | chr10:11820951-11821485 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 25 |
| Conread position: | 197-698 |
| Cow position: | chr10:39880153-39879627 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 39 |
| Conread position: | 23-227 |
| Cow position: | chr11:30187321-30187529 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 43, 17 |
| Conread position: | 25-229 |
| Cow position: | chr11:13162995-13163200 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 126, 77 |
| Conread position: | 27-373 |
| Cow position: | chr11:36762125-36762462 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 221 |
| Conread position: | 28-377 |
| Cow position: | chr11:30205589-30205943 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 15, 110 |
| Conread position: | 47-377 |
| Cow position: | chr11:13066993-13066673 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 55 |
| Conread position: | 50-377 |
| Cow position: | chr11:36713422-36713106 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 51-325 |
| Cow position: | chr11:44231184-44231463 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 99, 47 |
| Conread position: | 56-354 |
| Cow position: | chr11:18073327-18073045 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 232, 92 |
| Conread position: | 250-383 |
| Cow position: | chr11:30187748-30187878 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 41-373 |
| Cow position: | chr12:17976816-17977144 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 193 |
| Conread position: | 48-305 |
| Cow position: | chr13:21131455-21131712 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 86 |
| Conread position: | 51-377 |
| Cow position: | chr13:22185473-22185157 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 103 |
| Conread position: | 54-376 |
| Cow position: | chr13:34048383-34048703 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 73 |
| Conread position: | 75-354 |
| Cow position: | chr13:29202584-29202314 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 243, 62 |
| Conread position: | 114-377 |
| Cow position: | chr13:31556901-31556637 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 172, 34 |
| Conread position: | 344-657 |
| Cow position: | chr13:33336347-33336028 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 106 |
| Conread position: | 50-377 |
| Cow position: | chr14:46513175-46513495 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 291, 53 |
| Conread position: | 51-377 |
| Cow position: | chr14:9516187-9515867 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 20 |
| Conread position: | 51-377 |
| Cow position: | chr14:38816193-38815853 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 120 |
| Conread position: | 53-383 |
| Cow position: | chr14:47654788-47655117 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 71, 87 |
| Conread position: | 60-216 |
| Cow position: | chr14:42122944-42122785 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 93, 50 |
| Conread position: | 64-376 |
| Cow position: | chr14:30706656-30706332 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 71, 114 |
| Conread position: | 73-377 |
| Cow position: | chr14:33487599-33487899 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 260, 51 |
| Conread position: | 200-694 |
| Cow position: | chr14:34043853-34043338 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 47 |
| Conread position: | 47-359 |
| Cow position: | chr15:30810627-30810941 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 202 |
| Conread position: | 50-376 |
| Cow position: | chr15:20357280-20356942 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 242 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 26, 78 |
| Conread position: | 53-379 |
| Cow position: | chr15:1254494-1254834 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 189, 58 |
| Conread position: | 75-400 |
| Cow position: | chr15:11298740-11298432 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 75-680 |
| Cow position: | chr15:7788042-7787418 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 57 |
| Conread position: | 81-386 |
| Cow position: | chr15:498417-498719 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 167 |
| Conread position: | 40-195 |
| Cow position: | chr16:41757258-41757105 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 12, 41 |
| Conread position: | 50-376 |
| Cow position: | chr16:28438122-28437796 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 199 |
| Conread position: | 53-397 |
| Cow position: | chr16:25170621-25170962 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 46 |
| Conread position: | 172-383 |
| Cow position: | chr16:41756908-41756701 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 155, 13 |
| Conread position: | 49-376 |
| Cow position: | chr17:15384117-15384454 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 80 |
| Conread position: | 60-373 |
| Cow position: | chr17:13893627-13893324 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 264, 38 |
| Conread position: | 344-700 |
| Cow position: | chr17:6068739-6069103 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 90 |
| Conread position: | 29-352 |
| Cow position: | chr18:4885150-4884821 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 227 |
| Conread position: | 47-399 |
| Cow position: | chr19:32183012-32182667 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 239 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 255, 55 |
| Conread position: | 55-233 |
| Cow position: | chr19:7449542-7449369 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 5, 63 |
| Conread position: | 130-383 |
| Cow position: | chr19:17018979-17019236 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 197, 18 |
| Conread position: | 47-383 |
| Cow position: | chr2:63977811-63978147 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 206 |
| Conread position: | 60-377 |
| Cow position: | chr2:77208573-77208894 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 39, 92 |
| Conread position: | 65-698 |
| Cow position: | chr2:11692104-11692742 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 84 |
| Conread position: | 170-377 |
| Cow position: | chr2:45968311-45968109 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 118, 75 |
| Conread position: | 187-386 |
| Cow position: | chr2:45919908-45919716 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 138, 60 |
| Conread position: | 47-700 |
| Cow position: | chr20:18325145-18324465 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 44 |
| Conread position: | 75-454 |
| Cow position: | chr20:13434476-13434095 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 268 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 33, 54 |
| Conread position: | 71-377 |
| Cow position: | chr21:37292741-37293046 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 178 |
| Conread position: | 86-636 |
| Cow position: | chr21:21517736-21518292 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 373 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 204, 51 |
| Conread position: | 186-364 |
| Cow position: | chr21:25975553-25975722 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 115, 44 |
| Conread position: | 212-383 |
| Cow position: | chr21:23602854-23603030 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 18, 41 |
| Conread position: | 7-376 |
| Cow position: | chr22:36591502-36591144 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 37-372 |
| Cow position: | chr22:41239027-41239365 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 17, 108 |
| Conread position: | 47-176 |
| Cow position: | chr22:36552762-36552632 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 47-377 |
| Cow position: | chr22:8875574-8875905 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 8 |
| Conread position: | 47-693 |
| Cow position: | chr22:36580825-36580140 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 107 |
| Conread position: | 50-377 |
| Cow position: | chr22:292496-292164 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 183 |
| Conread position: | 51-339 |
| Cow position: | chr22:297961-297675 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 72, 194 |
| Conread position: | 70-516 |
| Cow position: | chr22:8148457-8148000 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 306 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 178, 57 |
| Conread position: | 167-376 |
| Cow position: | chr22:36552352-36552155 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 49-364 |
| Cow position: | chr23:26836628-26836947 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 206 |
| Conread position: | 50-269 |
| Cow position: | chr23:13509405-13509627 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 109, 81 |
| Conread position: | 31-481 |
| Cow position: | chr24:14872945-14872500 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 9 |
| Conread position: | 51-377 |
| Cow position: | chr24:6048653-6048978 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 105, 22 |
| Conread position: | 29-373 |
| Cow position: | chr25:3378349-3378013 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 44 |
| Conread position: | 378-685 |
| Cow position: | chr25:27365231-27365553 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 10 |
| Conread position: | 88-358 |
| Cow position: | chr27:6013788-6014072 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 154, 53 |
| Conread position: | 47-377 |
| Cow position: | chr28:29436853-29436518 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 33 |
| Conread position: | 47-399 |
| Cow position: | chr28:5801003-5801355 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 81 |
| Conread position: | 47-399 |
| Cow position: | chr28:10230212-10229861 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 178 |
| Conread position: | 47-376 |
| Cow position: | chr29:8062508-8062194 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 233 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 60, 53 |
| Conread position: | 81-383 |
| Cow position: | chr29:19907861-19908171 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 10, 72 |
| Conread position: | 150-700 |
| Cow position: | chr29:16016670-16016104 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 83 |
| Conread position: | 30-393 |
| Cow position: | chr3:31415412-31415787 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 9 |
| Conread position: | 40-376 |
| Cow position: | chr3:70887030-70887353 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 238 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 316, 87 |
| Conread position: | 47-204 |
| Cow position: | chr3:37624583-37624737 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 53-379 |
| Cow position: | chr3:12680123-12679802 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 257, 58 |
| Conread position: | 73-383 |
| Cow position: | chr3:64821901-64822209 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 40 |
| Conread position: | 76-373 |
| Cow position: | chr3:49272567-49272277 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 225, 49 |
| Conread position: | 83-377 |
| Cow position: | chr3:18728829-18728544 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 92, 65 |
| Conread position: | 157-622 |
| Cow position: | chr3:21304770-21304287 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 13 |
| Conread position: | 25-700 |
| Cow position: | chr4:968953-968248 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 106 |
| Conread position: | 29-700 |
| Cow position: | chr4:4176497-4177184 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 226 |
| Conread position: | 47-294 |
| Cow position: | chr4:32622080-32622318 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 50-377 |
| Cow position: | chr4:1496667-1496357 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 58 |
| Conread position: | 55-376 |
| Cow position: | chr4:6212197-6211885 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 5, 60 |
| Conread position: | 73-379 |
| Cow position: | chr4:495835-495529 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 228, 54 |
| Conread position: | 73-383 |
| Cow position: | chr4:14549724-14550028 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 9, 68 |
| Conread position: | 73-383 |
| Cow position: | chr4:44925810-44925478 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 151 |
| Conread position: | 137-666 |
| Cow position: | chr4:19251386-19251914 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 65 |
| Conread position: | 171-377 |
| Cow position: | chr4:27295909-27295704 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 5, 87 |
| Conread position: | 14-551 |
| Cow position: | chr5:24108422-24107906 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 8 |
| Conread position: | 47-347 |
| Cow position: | chr5:58055272-58054985 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 49-555 |
| Cow position: | chr5:41358276-41357747 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 348 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 281, 104 |
| Conread position: | 50-376 |
| Cow position: | chr5:18402188-18401864 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 202, 62 |
| Conread position: | 82-373 |
| Cow position: | chr5:28023347-28023623 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 145, 43 |
| Conread position: | 34-250 |
| Cow position: | chr6:6543264-6543488 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 43, 172 |
| Conread position: | 49-377 |
| Cow position: | chr6:10630905-10631240 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 177 |
| Conread position: | 53-700 |
| Cow position: | chr6:8752581-8751913 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 20 |
| Conread position: | 60-228 |
| Cow position: | chr6:69142360-69142532 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 30, 68 |
| Conread position: | 69-693 |
| Cow position: | chr6:31637574-31636951 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 309, 33 |
| Conread position: | 73-375 |
| Cow position: | chr6:35434114-35434405 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 218 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 47-576 |
| Cow position: | chr7:30302641-30303175 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 23 |
| Conread position: | 54-700 |
| Cow position: | chr7:26851718-26852397 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 195 |
| Conread position: | 76-383 |
| Cow position: | chr7:67812624-67812926 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 276, 26 |
| Conread position: | 77-700 |
| Cow position: | chr7:27584642-27583996 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 49 |
| Conread position: | 87-377 |
| Cow position: | chr7:19048473-19048181 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 215 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 71, 15 |
| Conread position: | 103-382 |
| Cow position: | chr7:58377679-58377409 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 248, 18 |
| Conread position: | 150-375 |
| Cow position: | chr7:41876129-41875911 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 98 |
| Conread position: | 283-685 |
| Cow position: | chr7:33351532-33351944 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 162, 34 |
| Conread position: | 35-374 |
| Cow position: | chr8:16084941-16085269 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 237 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 57, 66 |
| Conread position: | 47-701 |
| Cow position: | chr8:38578155-38577491 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 84 |
| Conread position: | 48-698 |
| Cow position: | chr8:38586075-38585427 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 72 |
| Conread position: | 83-377 |
| Cow position: | chr8:24874873-24874573 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 168 |
| Conread position: | 2-376 |
| Cow position: | chr9:3393783-3393420 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 28-375 |
| Cow position: | chr9:59511223-59511581 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 9 |
| Conread position: | 30-337 |
| Cow position: | chr9:3726530-3726842 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 268 |
| Conread position: | 47-702 |
| Cow position: | chr9:29328535-29329220 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 101 |
| Conread position: | 65-376 |
| Cow position: | chr9:7012609-7012914 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 13, 47 |
| Conread position: | 69-366 |
| Cow position: | chr9:64159418-64159713 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 80 |
| Conread position: | 177-373 |
| Cow position: | chr9:42555901-42556106 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 75, 184 |
| Conread position: | 50-365 |
| Cow position: | chrX:10417529-10417221 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 69-383 |
| Cow position: | chrX:24113020-24112717 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 261, 31 |
| Conread position: | 73-379 |
| Cow position: | chrX:26427846-26427539 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 5, 65 |
| Conread position: | 73-702 |
| Cow position: | chrX:13417611-13416958 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 65 |
| Conread position: | 75-356 |
| Cow position: | chrX:30132610-30132328 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 47, 90 |
| Conread position: | 76-383 |
| Cow position: | chrX:24481244-24480942 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 262, 48 |
| Conread position: | 77-377 |
| Cow position: | chrX:29814643-29814957 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 184 |
| Conread position: | 80-354 |
| Cow position: | chrX:19873615-19873880 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 247, 22 |
| Conread position: | 126-377 |
| Cow position: | chrX:6250578-6250326 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 200, 32 |
| Conread position: | 157-667 |
| Cow position: | chrX:41889069-41888553 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 90 |