Cow genome map
| Conread name: | Ova1-OVRM10132C08 |
| Conread position: | 223-581 |
| Cow position: | chr1:85338701-85338329 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 269 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 224, 99 |
| Conread position: | 238-616 |
| Cow position: | chr1:29901419-29901810 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 155 |
| Conread position: | 240-545 |
| Cow position: | chr1:24780654-24780956 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 24 |
| Conread position: | 245-562 |
| Cow position: | chr1:56718882-56718564 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 89 |
| Conread position: | 245-614 |
| Cow position: | chr1:92433588-92433219 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 71 |
| Conread position: | 257-544 |
| Cow position: | chr1:57573782-57574060 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 28 |
| Conread position: | 245-616 |
| Cow position: | chr10:9287607-9287214 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 49 |
| Conread position: | 245-616 |
| Cow position: | chr10:24308358-24308727 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 73 |
| Conread position: | 250-616 |
| Cow position: | chr10:37913622-37914004 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 66 |
| Conread position: | 302-544 |
| Cow position: | chr10:6851009-6850769 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 112 |
| Conread position: | 358-578 |
| Cow position: | chr10:29091409-29091641 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 104, 31 |
| Conread position: | 239-616 |
| Cow position: | chr11:33686997-33687382 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 81 |
| Conread position: | 245-581 |
| Cow position: | chr11:31885054-31884719 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 33 |
| Conread position: | 238-615 |
| Cow position: | chr12:35311151-35311534 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 204 |
| Conread position: | 240-583 |
| Cow position: | chr12:2967701-2967361 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 169 |
| Conread position: | 245-616 |
| Cow position: | chr12:20316984-20317368 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 63 |
| Conread position: | 251-616 |
| Cow position: | chr12:31260667-31261036 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 254 |
| Conread position: | 323-616 |
| Cow position: | chr12:25143059-25143355 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 138, 158 |
| Conread position: | 245-616 |
| Cow position: | chr13:15446467-15446847 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 287 |
| Conread position: | 360-588 |
| Cow position: | chr13:30431583-30431355 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 179 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 105, 62 |
| Conread position: | 240-616 |
| Cow position: | chr14:42849177-42849566 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 213 |
| Conread position: | 245-580 |
| Cow position: | chr14:17899960-17900301 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 12 |
| Conread position: | 245-597 |
| Cow position: | chr14:1892241-1891882 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 268 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 158, 32 |
| Conread position: | 245-616 |
| Cow position: | chr14:4991744-4992124 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 102 |
| Conread position: | 245-616 |
| Cow position: | chr14:31400072-31400453 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 256 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 11, 36 |
| Conread position: | 459-611 |
| Cow position: | chr14:30662834-30662997 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 45, 106 |
| Conread position: | 239-606 |
| Cow position: | chr16:20205078-20204701 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 331 |
| Conread position: | 245-615 |
| Cow position: | chr16:29158692-29158304 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 77 |
| Conread position: | 233-581 |
| Cow position: | chr17:40811379-40811035 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 12 |
| Conread position: | 240-565 |
| Cow position: | chr18:33851419-33851094 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 132 |
| Conread position: | 243-544 |
| Cow position: | chr18:42966369-42966064 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 245-615 |
| Cow position: | chr18:32258863-32259210 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 48, 72 |
| Conread position: | 240-544 |
| Cow position: | chr19:24928050-24928362 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 245-616 |
| Cow position: | chr19:29627823-29628209 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 232 |
| Conread position: | 251-559 |
| Cow position: | chr19:28938249-28938551 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 209, 8 |
| Conread position: | 241-602 |
| Cow position: | chr2:41954324-41953947 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 114 |
| Conread position: | 242-615 |
| Cow position: | chr2:71164155-71164538 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 14 |
| Conread position: | 245-606 |
| Cow position: | chr2:4254983-4255348 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 83 |
| Conread position: | 245-616 |
| Cow position: | chr2:19212483-19212850 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 12 |
| Conread position: | 441-616 |
| Cow position: | chr2:15059875-15060058 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 63, 125 |
| Conread position: | 245-544 |
| Cow position: | chr20:14210550-14210835 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 221 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 215, 51 |
| Conread position: | 437-616 |
| Cow position: | chr20:29843943-29843745 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 141 |
| Conread position: | 444-609 |
| Cow position: | chr20:32354619-32354447 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 21, 117 |
| Conread position: | 444-616 |
| Cow position: | chr20:32352217-32352038 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 21, 117 |
| Conread position: | 238-607 |
| Cow position: | chr22:21897017-21896638 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 269 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 245-545 |
| Cow position: | chr22:33201053-33200750 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 0 |
| Conread position: | 245-606 |
| Cow position: | chr22:46611275-46611641 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 41 |
| Conread position: | 245-616 |
| Cow position: | chr22:28130518-28130133 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 261 |
| Conread position: | 251-616 |
| Cow position: | chr22:13720985-13721358 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 172 |
| Conread position: | 257-616 |
| Cow position: | chr22:11987951-11988325 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 38 |
| Conread position: | 245-579 |
| Cow position: | chr24:12991631-12991285 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 10, 332 |
| Conread position: | 245-616 |
| Cow position: | chr24:45216579-45216964 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 104 |
| Conread position: | 236-544 |
| Cow position: | chr26:28657368-28657674 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 23 |
| Conread position: | 240-615 |
| Cow position: | chr26:6030177-6030572 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 134 |
| Conread position: | 245-616 |
| Cow position: | chr26:3755816-3755434 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 262 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 164, 123 |
| Conread position: | 245-616 |
| Cow position: | chr27:1502268-1501887 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 76 |
| Conread position: | 240-542 |
| Cow position: | chr28:25070673-25070367 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 246-572 |
| Cow position: | chr28:7807745-7807420 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 148 |
| Conread position: | 375-570 |
| Cow position: | chr28:16543042-16543237 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 85, 18 |
| Conread position: | 249-568 |
| Cow position: | chr29:27823878-27823557 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 150 |
| Conread position: | 293-616 |
| Cow position: | chr29:10159012-10159349 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 147 |
| Conread position: | 213-616 |
| Cow position: | chr3:15662727-15663144 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 355 |
| Conread position: | 245-545 |
| Cow position: | chr3:30908415-30908717 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 92 |
| Conread position: | 358-579 |
| Cow position: | chr3:77271952-77272162 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 106, 81 |
| Conread position: | 243-585 |
| Cow position: | chr4:30004496-30004846 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 324 |
| Conread position: | 287-616 |
| Cow position: | chr4:9391386-9391719 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 48, 35 |
| Conread position: | 238-615 |
| Cow position: | chr5:26467214-26466835 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 27 |
| Conread position: | 245-615 |
| Cow position: | chr5:59082606-59082990 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 123 |
| Conread position: | 250-616 |
| Cow position: | chr6:54886870-54887244 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 279 |
| Conread position: | 251-616 |
| Cow position: | chr6:52248790-52249165 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 55 |
| Conread position: | 253-616 |
| Cow position: | chr6:12535413-12535068 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 75, 6 |
| Conread position: | 369-541 |
| Cow position: | chr6:61071711-61071885 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 80, 9 |
| Conread position: | 385-616 |
| Cow position: | chr6:18969581-18969828 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 186 |
| Conread position: | 188-616 |
| Cow position: | chr7:51019455-51019023 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 16 |
| Conread position: | 233-616 |
| Cow position: | chr7:13530076-13530465 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 12 |
| Conread position: | 245-614 |
| Cow position: | chr7:35275670-35276052 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 197 |
| Conread position: | 302-559 |
| Cow position: | chr7:17329439-17329181 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 16 |
| Conread position: | 240-616 |
| Cow position: | chr8:38596642-38597026 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 67 |
| Conread position: | 241-615 |
| Cow position: | chr8:7101338-7101719 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 351 |
| Conread position: | 251-615 |
| Cow position: | chr8:18207670-18208028 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 44 |
| Conread position: | 388-561 |
| Cow position: | chr8:3291124-3291298 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 72, 153 |
| Conread position: | 233-616 |
| Cow position: | chr9:51011197-51010820 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 12 |
| Conread position: | 242-616 |
| Cow position: | chr9:24873294-24873679 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 130, 35 |
| Conread position: | 193-541 |
| Cow position: | chrX:15345505-15345161 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 223 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 28, 66 |
| Conread position: | 407-563 |
| Cow position: | chrX:11613934-11613776 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 53, 101 |
| Conread position: | 411-616 |
| Cow position: | chrX:26633686-26633892 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 72 |