Cow genome map
| Conread name: | Ova1-OVRM10135H10 |
| Conread position: | 8-208 |
| Cow position: | chr1:16573381-16573578 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 10-232 |
| Cow position: | chr1:24921968-24922191 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 177 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 20, 97 |
| Conread position: | 17-198 |
| Cow position: | chr1:74939267-74939087 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 117, 29 |
| Conread position: | 232-520 |
| Cow position: | chr1:86505243-86504943 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 218 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 62, 154 |
| Conread position: | 247-572 |
| Cow position: | chr1:65145056-65144723 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 229 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 45, 315 |
| Conread position: | 247-591 |
| Cow position: | chr1:37646858-37646503 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 2-216 |
| Cow position: | chr10:24023017-24023230 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 12 |
| Conread position: | 8-203 |
| Cow position: | chr10:23935305-23935107 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 9-243 |
| Cow position: | chr10:60723416-60723651 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 21 |
| Conread position: | 16-235 |
| Cow position: | chr10:25341668-25341446 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 121, 183 |
| Conread position: | 33-198 |
| Cow position: | chr10:37530279-37530444 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 136 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 49-233 |
| Cow position: | chr10:20398434-20398254 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 85, 119 |
| Conread position: | 232-575 |
| Cow position: | chr10:2736687-2737032 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 151 |
| Conread position: | 247-475 |
| Cow position: | chr10:35246393-35246158 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 46, 99 |
| Conread position: | 247-589 |
| Cow position: | chr10:325076-324722 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 201 |
| Conread position: | 249-591 |
| Cow position: | chr10:33215184-33215535 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 75 |
| Conread position: | 8-213 |
| Cow position: | chr11:31236195-31236400 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 7, 25 |
| Conread position: | 40-235 |
| Cow position: | chr11:69403047-69403246 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 247-531 |
| Cow position: | chr11:25525170-25525462 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 46, 181 |
| Conread position: | 255-473 |
| Cow position: | chr11:41093533-41093301 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 32-245 |
| Cow position: | chr13:12618376-12618160 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 36-241 |
| Cow position: | chr13:4663876-4663667 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 169 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 81, 88 |
| Conread position: | 44-231 |
| Cow position: | chr13:46524450-46524251 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 8-224 |
| Cow position: | chr14:33773124-33772908 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 7, 16 |
| Conread position: | 247-589 |
| Cow position: | chr14:12545951-12546304 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 157 |
| Conread position: | 247-591 |
| Cow position: | chr14:12834119-12834476 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 256-567 |
| Cow position: | chr14:44083630-44083955 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 235 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 29, 282 |
| Conread position: | 14-140 |
| Cow position: | chr15:24968613-24968739 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 40, 83 |
| Conread position: | 33-228 |
| Cow position: | chr15:60749-60559 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 36-235 |
| Cow position: | chr15:10736694-10736492 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 38 |
| Conread position: | 37-239 |
| Cow position: | chr15:36423488-36423694 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 241-591 |
| Cow position: | chr15:7319833-7320197 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 247-547 |
| Cow position: | chr15:1082706-1083016 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 46-204 |
| Cow position: | chr16:49230509-49230672 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 247-539 |
| Cow position: | chr16:26067153-26067452 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 46, 80 |
| Conread position: | 18-245 |
| Cow position: | chr17:29083527-29083302 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 72, 56 |
| Conread position: | 247-570 |
| Cow position: | chr17:10432960-10432642 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 46, 216 |
| Conread position: | 2-235 |
| Cow position: | chr18:33607820-33607596 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 136, 26 |
| Conread position: | 7-213 |
| Cow position: | chr18:41238124-41237925 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 8, 26 |
| Conread position: | 10-239 |
| Cow position: | chr18:15172435-15172205 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 178 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 126, 19 |
| Conread position: | 11-203 |
| Cow position: | chr18:27457493-27457691 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 32-228 |
| Cow position: | chr18:36648962-36648767 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 86, 108 |
| Conread position: | 232-480 |
| Cow position: | chr18:32245361-32245106 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 9-184 |
| Cow position: | chr19:19805273-19805452 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 6, 21 |
| Conread position: | 32-235 |
| Cow position: | chr19:2019194-2019397 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 14, 80 |
| Conread position: | 8-160 |
| Cow position: | chr2:44987108-44987259 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 7, 25 |
| Conread position: | 8-240 |
| Cow position: | chr2:37008706-37008470 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 22 |
| Conread position: | 8-250 |
| Cow position: | chr2:41157220-41156977 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 7, 25 |
| Conread position: | 11-193 |
| Cow position: | chr2:14807057-14807242 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 123, 18 |
| Conread position: | 32-204 |
| Cow position: | chr2:33390412-33390237 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 108, 166 |
| Conread position: | 36-235 |
| Cow position: | chr2:25930396-25930599 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 104, 124 |
| Conread position: | 37-175 |
| Cow position: | chr2:27075618-27075476 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 40-235 |
| Cow position: | chr2:193938-194121 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 180, 100 |
| Conread position: | 52-243 |
| Cow position: | chr2:2688374-2688177 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 231-463 |
| Cow position: | chr2:36018031-36017787 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 62, 205 |
| Conread position: | 232-478 |
| Cow position: | chr2:70656340-70656598 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 247-568 |
| Cow position: | chr2:18062242-18061894 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 8-233 |
| Cow position: | chr20:9511257-9511477 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 7, 25 |
| Conread position: | 10-233 |
| Cow position: | chr20:7512379-7512608 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 58, 18 |
| Conread position: | 32-215 |
| Cow position: | chr20:3468914-3468731 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 32-235 |
| Cow position: | chr20:13955161-13954951 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 8-208 |
| Cow position: | chr21:27263352-27263150 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 7, 20 |
| Conread position: | 8-233 |
| Cow position: | chr21:22855568-22855349 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 7, 24 |
| Conread position: | 32-213 |
| Cow position: | chr21:19965251-19965069 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 99, 134 |
| Conread position: | 36-213 |
| Cow position: | chr21:17721221-17721043 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 92, 130 |
| Conread position: | 232-591 |
| Cow position: | chr21:27743203-27743568 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 62 |
| Conread position: | 2-242 |
| Cow position: | chr22:18122287-18122517 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 139 |
| Conread position: | 9-235 |
| Cow position: | chr22:24817266-24817496 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 13-204 |
| Cow position: | chr22:15057762-15057571 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 121, 174 |
| Conread position: | 37-240 |
| Cow position: | chr22:11779304-11779510 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 107, 37 |
| Conread position: | 49-203 |
| Cow position: | chr22:11599719-11599562 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 232-436 |
| Cow position: | chr22:21904501-21904700 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 194, 53 |
| Conread position: | 232-571 |
| Cow position: | chr22:4061664-4061334 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 62 |
| Conread position: | 232-591 |
| Cow position: | chr22:32210212-32210576 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 318 |
| Conread position: | 247-577 |
| Cow position: | chr22:2528445-2528093 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 168 |
| Conread position: | 249-514 |
| Cow position: | chr22:11922442-11922178 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 41, 238 |
| Conread position: | 9-138 |
| Cow position: | chr23:362152-362281 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 232-577 |
| Cow position: | chr23:26230718-26231072 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 250 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 64, 315 |
| Conread position: | 232-589 |
| Cow position: | chr23:32007819-32007455 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 49-213 |
| Cow position: | chr24:36779813-36779646 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 85, 64 |
| Conread position: | 232-591 |
| Cow position: | chr24:23052201-23051833 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 168 |
| Conread position: | 7-235 |
| Cow position: | chr25:40322007-40322240 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 10-213 |
| Cow position: | chr25:41121282-41121076 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 124, 27 |
| Conread position: | 232-591 |
| Cow position: | chr25:11437400-11437042 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 62 |
| Conread position: | 20-193 |
| Cow position: | chr26:6837146-6836967 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 250-403 |
| Cow position: | chr26:7960826-7960988 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 8-194 |
| Cow position: | chr27:8262331-8262140 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 247-591 |
| Cow position: | chr27:27063894-27064246 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 202 |
| Conread position: | 248-567 |
| Cow position: | chr27:11090647-11090974 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 236 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 63, 49 |
| Conread position: | 8-235 |
| Cow position: | chr28:6473720-6473949 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 126, 24 |
| Conread position: | 32-235 |
| Cow position: | chr28:1383939-1384146 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 33-197 |
| Cow position: | chr28:10772589-10772421 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 33-235 |
| Cow position: | chr28:23675326-23675121 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 162 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 100, 190 |
| Conread position: | 231-591 |
| Cow position: | chr28:15375426-15375058 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 218 |
| Conread position: | 242-531 |
| Cow position: | chr28:1383803-1383512 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 44, 256 |
| Conread position: | 247-591 |
| Cow position: | chr28:19194173-19194530 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 201 |
| Conread position: | 248-591 |
| Cow position: | chr28:7882226-7882569 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 303 |
| Conread position: | 248-591 |
| Cow position: | chr28:21767483-21767128 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 200 |
| Conread position: | 8-233 |
| Cow position: | chr29:7290053-7289829 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 216, 157 |
| Conread position: | 247-591 |
| Cow position: | chr29:32290014-32290363 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 146 |
| Conread position: | 253-573 |
| Cow position: | chr29:2463282-2462966 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 41, 146 |
| Conread position: | 253-577 |
| Cow position: | chr29:4218087-4218412 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 236 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 43, 129 |
| Conread position: | 256-591 |
| Cow position: | chr29:28696746-28696407 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 244 |
| Conread position: | 8-208 |
| Cow position: | chr3:21178834-21179040 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 7, 30 |
| Conread position: | 10-228 |
| Cow position: | chr3:64171662-64171445 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 5, 162 |
| Conread position: | 231-591 |
| Cow position: | chr3:5951048-5950691 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 150 |
| Conread position: | 231-591 |
| Cow position: | chr3:73931021-73930665 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 99 |
| Conread position: | 247-514 |
| Cow position: | chr3:26993661-26993930 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 46, 72 |
| Conread position: | 10-226 |
| Cow position: | chr4:43898660-43898875 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 97, 21 |
| Conread position: | 23-201 |
| Cow position: | chr4:22014209-22014389 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 232-590 |
| Cow position: | chr4:49814632-49814260 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 232-591 |
| Cow position: | chr4:46667982-46668325 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 62 |
| Conread position: | 247-591 |
| Cow position: | chr4:22101867-22101512 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 232 |
| Conread position: | 247-591 |
| Cow position: | chr4:43370456-43370095 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 235 |
| Conread position: | 10-233 |
| Cow position: | chr5:4165954-4165731 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 127 |
| Conread position: | 19-207 |
| Cow position: | chr5:32697475-32697666 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 82, 62 |
| Conread position: | 32-238 |
| Cow position: | chr5:25920483-25920687 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 108, 138 |
| Conread position: | 43-205 |
| Cow position: | chr5:19969749-19969914 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 90, 155 |
| Conread position: | 241-591 |
| Cow position: | chr5:50599497-50599854 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 100 |
| Conread position: | 247-591 |
| Cow position: | chr5:35762724-35763078 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 154 |
| Conread position: | 7-225 |
| Cow position: | chr6:3272014-3272236 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 8, 31 |
| Conread position: | 40-238 |
| Cow position: | chr6:10650359-10650561 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 42-222 |
| Cow position: | chr6:50526942-50526759 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 49-177 |
| Cow position: | chr6:50637694-50637562 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 232-585 |
| Cow position: | chr6:50571760-50572114 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 94 |
| Conread position: | 8-179 |
| Cow position: | chr7:20433530-20433355 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 7, 29 |
| Conread position: | 8-213 |
| Cow position: | chr7:44745292-44745501 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 8, 29 |
| Conread position: | 13-233 |
| Cow position: | chr7:48722530-48722753 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 10 |
| Conread position: | 19-233 |
| Cow position: | chr7:68575672-68575470 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 32-201 |
| Cow position: | chr7:44697176-44697012 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 32-235 |
| Cow position: | chr7:19798928-19799135 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 247-591 |
| Cow position: | chr7:61818483-61818130 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 90 |
| Conread position: | 8-212 |
| Cow position: | chr8:53252400-53252605 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 7, 168 |
| Conread position: | 8-238 |
| Cow position: | chr8:53429135-53428898 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 13-233 |
| Cow position: | chr8:43477268-43477050 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 40-221 |
| Cow position: | chr8:14302408-14302224 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 94, 179 |
| Conread position: | 49-227 |
| Cow position: | chr8:226142-226324 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 36-212 |
| Cow position: | chr9:51556335-51556155 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 248-591 |
| Cow position: | chr9:1464317-1463965 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 142 |
| Conread position: | 2-213 |
| Cow position: | chrX:9095952-9095738 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 132, 114 |
| Conread position: | 32-184 |
| Cow position: | chrX:35847505-35847349 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 36-245 |
| Cow position: | chrX:20790265-20790480 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 109, 7 |
| Conread position: | 47-235 |
| Cow position: | chrX:44193175-44193363 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 87, 141 |
| Conread position: | 232-446 |
| Cow position: | chrX:14924458-14924679 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 232-591 |
| Cow position: | chrX:23121803-23122173 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 309 |
| Conread position: | 247-568 |
| Cow position: | chrX:36557210-36557555 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 49, 153 |
| Conread position: | 247-577 |
| Cow position: | chrX:36218977-36219308 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 65, 46 |
| Conread position: | 247-591 |
| Cow position: | chrX:24441818-24441458 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 205 |
| Conread position: | 248-590 |
| Cow position: | chrX:20976625-20976274 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 244 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 65, 319 |