Cow genome map

Conread name: Ova1-OVRM10212B12

Conread position: 178-579
Cow position: chr1:40512839-40512423 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 187-552
Cow position: chr1:29033334-29033707 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 5

Conread position: 187-555
Cow position: chr1:67328045-67327677 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 242
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 5

Conread position: 191-550
Cow position: chr1:55321923-55321558 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 238

Conread position: 192-456
Cow position: chr1:21720441-21720704 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 198
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 179, 7

Conread position: 193-504
Cow position: chr1:78361374-78361682 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 212
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 49

Conread position: 194-376
Cow position: chr1:58179478-58179293 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 203-367
Cow position: chr1:29413906-29413747 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 203-555
Cow position: chr1:18013270-18012913 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 252
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 49, 65

Conread position: 207-555
Cow position: chr1:33389361-33389724 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 217

Conread position: 210-668
Cow position: chr1:67287076-67287558 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 64

Conread position: 236-530
Cow position: chr1:23052056-23052357 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 221
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 33, 116

Conread position: 242-552
Cow position: chr1:67315222-67315530 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 212
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 64, 23

Conread position: 249-672
Cow position: chr1:53198823-53199279 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 36

Conread position: 250-672
Cow position: chr1:40053630-40054093 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 176

Conread position: 251-555
Cow position: chr1:49973904-49973596 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 31

Conread position: 254-672
Cow position: chr1:72186591-72186140 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 35

Conread position: 255-554
Cow position: chr1:58336126-58336429 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 257-555
Cow position: chr1:30534731-30534429 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 24

Conread position: 258-673
Cow position: chr1:76545243-76544796 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 19

Conread position: 259-673
Cow position: chr1:63605484-63605036 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 7

Conread position: 262-555
Cow position: chr1:21999658-21999362 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 7

Conread position: 262-555
Cow position: chr1:57366833-57366533 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 18

Conread position: 262-555
Cow position: chr1:76752354-76752057 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 15

Conread position: 266-513
Cow position: chr1:33712371-33712616 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 195
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 105, 10

Conread position: 267-555
Cow position: chr1:8825353-8825644 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 15

Conread position: 269-672
Cow position: chr1:102549540-102549962 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 20

Conread position: 270-555
Cow position: chr1:48246148-48246426 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 38

Conread position: 270-569
Cow position: chr1:17941481-17941182 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 16

Conread position: 281-426
Cow position: chr1:59674766-59674916 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 5

Conread position: 281-554
Cow position: chr1:97226395-97226118 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 5

Conread position: 281-555
Cow position: chr1:3385704-3385427 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 11

Conread position: 281-555
Cow position: chr1:28873390-28873669 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr1:42736768-42737047 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr1:58883751-58883473 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 281-555
Cow position: chr1:62244331-62244051 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 34

Conread position: 281-555
Cow position: chr1:69922122-69921843 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 281-555
Cow position: chr1:73070740-73070460 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr1:79456656-79456378 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 26

Conread position: 281-555
Cow position: chr1:88131087-88131366 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr1:91892807-91892527 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr1:94659998-94660267 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 34

Conread position: 281-555
Cow position: chr1:99913733-99914012 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-673
Cow position: chr1:33551240-33551666 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 20

Conread position: 281-673
Cow position: chr1:93854837-93855259 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 33

Conread position: 281-673
Cow position: chr1:102434723-102434298 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 20

Conread position: 282-555
Cow position: chr1:85882314-85882587 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 7

Conread position: 282-673
Cow position: chr1:82923862-82923447 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 10

Conread position: 285-502
Cow position: chr1:30283230-30283008 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 86, 191

Conread position: 285-554
Cow position: chr1:60339618-60339890 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 129

Conread position: 290-673
Cow position: chr1:31418192-31417777 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 11

Conread position: 291-673
Cow position: chr1:72081104-72081506 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 24

Conread position: 296-554
Cow position: chr1:17012415-17012151 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-554
Cow position: chr1:20829213-20829477 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-554
Cow position: chr1:31397014-31397278 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-554
Cow position: chr1:85792010-85792269 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 117

Conread position: 296-662
Cow position: chr1:9382224-9381819 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 288
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 77, 42

Conread position: 296-663
Cow position: chr1:40574537-40574943 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 296-668
Cow position: chr1:69766786-69767189 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-672
Cow position: chr1:28711240-28711628 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 266

Conread position: 296-672
Cow position: chr1:39544093-39544505 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 234

Conread position: 296-672
Cow position: chr1:86547811-86547403 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 298-663
Cow position: chr1:34692558-34692946 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 19

Conread position: 305-552
Cow position: chr1:17036224-17035973 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 305-554
Cow position: chr1:11291773-11291520 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 187

Conread position: 305-554
Cow position: chr1:89425906-89426161 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 305-668
Cow position: chr1:82564836-82565238 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 305-672
Cow position: chr1:56490183-56490590 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 305-672
Cow position: chr1:80358848-80358442 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 308-555
Cow position: chr1:56143995-56143743 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 99

Conread position: 309-554
Cow position: chr1:66999363-66999603 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 63, 156

Conread position: 309-672
Cow position: chr1:13450543-13450943 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 119

Conread position: 312-549
Cow position: chr1:43571062-43570822 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 178
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 58, 203

Conread position: 322-672
Cow position: chr1:59209801-59209411 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 331-555
Cow position: chr1:5502330-5502560 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 187-555
Cow position: chr10:21900536-21900168 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 26

Conread position: 191-485
Cow position: chr10:15860655-15860371 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 33

Conread position: 191-525
Cow position: chr10:14861501-14861839 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 247
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 111, 96

Conread position: 193-544
Cow position: chr10:44294660-44294315 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 47

Conread position: 193-555
Cow position: chr10:3542974-3542612 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 20

Conread position: 194-417
Cow position: chr10:42110583-42110809 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 73, 53

Conread position: 194-417
Cow position: chr10:42749017-42749248 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 112

Conread position: 197-555
Cow position: chr10:16476505-16476853 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 251
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 17, 33

Conread position: 203-533
Cow position: chr10:32064834-32065186 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 248
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 30, 21

Conread position: 209-554
Cow position: chr10:26596874-26597229 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 15

Conread position: 213-553
Cow position: chr10:31524377-31524711 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 52

Conread position: 250-563
Cow position: chr10:17432952-17432628 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 226

Conread position: 251-663
Cow position: chr10:39040992-39040551 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 64

Conread position: 251-673
Cow position: chr10:38345052-38344597 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 41

Conread position: 257-419
Cow position: chr10:8339712-8339879 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 136
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 21, 34

Conread position: 257-555
Cow position: chr10:19511923-19512225 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 18

Conread position: 257-555
Cow position: chr10:29846335-29846031 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 21

Conread position: 262-673
Cow position: chr10:38538182-38537734 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 28

Conread position: 268-555
Cow position: chr10:11821089-11821384 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 113, 11

Conread position: 269-580
Cow position: chr10:54978925-54978620 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 199

Conread position: 271-555
Cow position: chr10:7281767-7281476 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 6

Conread position: 281-414
Cow position: chr10:25359739-25359877 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr10:21487255-21487534 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr10:57989654-57989375 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 285-554
Cow position: chr10:51952286-51952011 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 285-555
Cow position: chr10:32578624-32578899 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 285-672
Cow position: chr10:28641875-28642295 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 235

Conread position: 296-554
Cow position: chr10:25564911-25564650 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-672
Cow position: chr10:14804183-14804596 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 145

Conread position: 296-672
Cow position: chr10:21400324-21399909 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-673
Cow position: chr10:41157794-41158204 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 304-555
Cow position: chr10:16925893-16926149 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 17

Conread position: 305-554
Cow position: chr10:19495930-19495669 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 194
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 66, 0

Conread position: 305-673
Cow position: chr10:2120650-2120248 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 41

Conread position: 322-672
Cow position: chr10:4191865-4191486 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 349-673
Cow position: chr10:14335441-14335086 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 192-552
Cow position: chr11:59369704-59370072 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 110

Conread position: 192-555
Cow position: chr11:28063725-28064084 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 21

Conread position: 198-421
Cow position: chr11:30124531-30124297 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 70, 19

Conread position: 199-555
Cow position: chr11:66727264-66727627 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 85

Conread position: 202-663
Cow position: chr11:10090570-10091070 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 46

Conread position: 203-427
Cow position: chr11:9220057-9219839 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 60, 10

Conread position: 206-555
Cow position: chr11:28049301-28048954 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 18

Conread position: 213-555
Cow position: chr11:52886140-52885810 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 242
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 66, 118

Conread position: 217-547
Cow position: chr11:15899036-15898700 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 224
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 17, 249

Conread position: 217-673
Cow position: chr11:62229117-62229588 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 101

Conread position: 220-419
Cow position: chr11:39802355-39802563 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 78

Conread position: 235-554
Cow position: chr11:33194632-33194306 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 216

Conread position: 242-421
Cow position: chr11:30125311-30125123 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 21, 35

Conread position: 251-554
Cow position: chr11:44157305-44156997 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 31

Conread position: 259-663
Cow position: chr11:19102531-19102105 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 57

Conread position: 262-554
Cow position: chr11:10847403-10847699 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 28

Conread position: 262-555
Cow position: chr11:23877263-23877560 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 28

Conread position: 266-672
Cow position: chr11:9734711-9734273 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 375

Conread position: 270-555
Cow position: chr11:12358457-12358167 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 45

Conread position: 270-555
Cow position: chr11:22934767-22935047 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 270-555
Cow position: chr11:58134355-58134644 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 12

Conread position: 274-441
Cow position: chr11:54209581-54209754 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 277-673
Cow position: chr11:76374231-76373815 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 24

Conread position: 279-663
Cow position: chr11:31874801-31874388 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 13

Conread position: 281-543
Cow position: chr11:20510103-20510366 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 101, 12

Conread position: 281-553
Cow position: chr11:12093536-12093809 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 65

Conread position: 281-554
Cow position: chr11:9157176-9156904 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 281-555
Cow position: chr11:4027585-4027310 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 281-555
Cow position: chr11:4270883-4270605 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr11:11988085-11988364 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr11:41170714-41170436 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr11:44251777-44252049 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 281-555
Cow position: chr11:53432088-53431809 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-673
Cow position: chr11:38835453-38835034 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 295-672
Cow position: chr11:17107702-17107287 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 179

Conread position: 296-554
Cow position: chr11:28229772-28229509 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 233

Conread position: 296-671
Cow position: chr11:67450483-67450891 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 297-555
Cow position: chr11:46246569-46246300 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 205
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 74, 45

Conread position: 298-555
Cow position: chr11:8245302-8245565 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 298-555
Cow position: chr11:85393817-85393555 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 130

Conread position: 304-672
Cow position: chr11:43514636-43514233 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 305-554
Cow position: chr11:3493005-3493246 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 66, 168

Conread position: 305-554
Cow position: chr11:57628052-57627789 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 305-672
Cow position: chr11:19064255-19063850 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 221

Conread position: 305-672
Cow position: chr11:67846577-67846169 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 305-673
Cow position: chr11:24393319-24393720 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 373

Conread position: 330-555
Cow position: chr11:7116239-7116470 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 173
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 41, 54

Conread position: 203-551
Cow position: chr12:21254481-21254131 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 249
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 24, 83

Conread position: 208-551
Cow position: chr12:1869477-1869827 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 243
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 22, 277

Conread position: 266-554
Cow position: chr12:2282802-2283101 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 16

Conread position: 270-555
Cow position: chr12:6406396-6406107 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 22

Conread position: 270-672
Cow position: chr12:14662378-14661943 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 16

Conread position: 271-555
Cow position: chr12:28765767-28765479 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 6

Conread position: 281-552
Cow position: chr12:27932680-27932399 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr12:21198225-21198500 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 5

Conread position: 281-555
Cow position: chr12:22205483-22205204 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 19

Conread position: 281-659
Cow position: chr12:11098507-11098911 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-663
Cow position: chr12:1402755-1403172 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 20

Conread position: 281-673
Cow position: chr12:25100796-25100368 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 296-672
Cow position: chr12:43031113-43030700 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 114

Conread position: 331-663
Cow position: chr12:8677775-8677422 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 134

Conread position: 442-672
Cow position: chr12:21209092-21209340 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 112, 30

Conread position: 191-673
Cow position: chr13:34937442-34937950 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 8

Conread position: 192-550
Cow position: chr13:29202414-29202040 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 255
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 81, 299

Conread position: 194-518
Cow position: chr13:34029021-34029365 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 239
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 42

Conread position: 198-555
Cow position: chr13:43983116-43982761 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 15

Conread position: 198-673
Cow position: chr13:20542084-20541569 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 15

Conread position: 199-555
Cow position: chr13:31556751-31556401 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 246
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 172, 25

Conread position: 213-555
Cow position: chr13:46731750-46731410 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 244
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 125, 56

Conread position: 214-555
Cow position: chr13:22185259-22184919 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 241
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 157, 11

Conread position: 217-438
Cow position: chr13:48357541-48357768 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 176
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 46, 70

Conread position: 228-432
Cow position: chr13:34766883-34766673 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 72, 51

Conread position: 249-672
Cow position: chr13:2388817-2388347 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 250-562
Cow position: chr13:11064157-11063852 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 53

Conread position: 255-673
Cow position: chr13:23003290-23002836 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 23

Conread position: 262-554
Cow position: chr13:35757268-35757563 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 22

Conread position: 262-555
Cow position: chr13:9044527-9044823 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 15

Conread position: 270-526
Cow position: chr13:22766057-22766318 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 16

Conread position: 274-554
Cow position: chr13:30238281-30238566 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 200

Conread position: 274-555
Cow position: chr13:1593120-1592834 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 41

Conread position: 281-553
Cow position: chr13:30303320-30303599 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 16

Conread position: 281-554
Cow position: chr13:4483838-4484116 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 38

Conread position: 281-554
Cow position: chr13:33336375-33336106 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr13:4941132-4941404 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 281-555
Cow position: chr13:15924340-15924061 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 20

Conread position: 281-555
Cow position: chr13:32737778-32737505 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 21

Conread position: 281-555
Cow position: chr13:34042325-34042046 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 282-663
Cow position: chr13:30656937-30656524 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 50

Conread position: 285-554
Cow position: chr13:3058070-3057795 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 178

Conread position: 285-554
Cow position: chr13:17308515-17308785 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 112

Conread position: 285-668
Cow position: chr13:34868789-34869209 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 203

Conread position: 294-554
Cow position: chr13:34325508-34325240 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 295-672
Cow position: chr13:32985296-32984883 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 296-554
Cow position: chr13:30244627-30244363 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 296-672
Cow position: chr13:31734034-31733619 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 303-672
Cow position: chr13:50109519-50109919 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 119

Conread position: 339-555
Cow position: chr13:34911063-34910843 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 158

Conread position: 191-518
Cow position: chr14:41408707-41409046 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 233
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 78, 233

Conread position: 192-350
Cow position: chr14:48825010-48825169 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 192-529
Cow position: chr14:33341961-33342305 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 21

Conread position: 192-664
Cow position: chr14:44377640-44378137 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 21

Conread position: 193-555
Cow position: chr14:30706450-30706087 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 248
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 111, 40

Conread position: 203-530
Cow position: chr14:37457568-37457234 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 243
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 81

Conread position: 203-663
Cow position: chr14:45303110-45302639 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 131

Conread position: 230-555
Cow position: chr14:22031555-22031223 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 24

Conread position: 249-555
Cow position: chr14:35386925-35386616 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 52

Conread position: 249-672
Cow position: chr14:2284216-2284680 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 196

Conread position: 251-673
Cow position: chr14:16919800-16919371 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 300
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 7, 20

Conread position: 258-548
Cow position: chr14:17761004-17760710 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 271

Conread position: 262-673
Cow position: chr14:17685299-17685742 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 37

Conread position: 264-554
Cow position: chr14:46464981-46465287 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 215
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 107, 28

Conread position: 270-478
Cow position: chr14:13323963-13323751 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 101, 95

Conread position: 270-555
Cow position: chr14:37223811-37224098 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 12

Conread position: 271-555
Cow position: chr14:12743161-12742873 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 6

Conread position: 274-444
Cow position: chr14:19620131-19620308 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 274-672
Cow position: chr14:30585045-30584614 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 15

Conread position: 279-673
Cow position: chr14:44685960-44686390 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 281-478
Cow position: chr14:28993934-28993732 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr14:13778875-13779151 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 20

Conread position: 281-555
Cow position: chr14:16273376-16273104 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 281-663
Cow position: chr14:5528982-5529401 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 41

Conread position: 281-673
Cow position: chr14:11154246-11153819 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 282-555
Cow position: chr14:17001141-17000864 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 33

Conread position: 285-672
Cow position: chr14:13864159-13863748 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 105

Conread position: 291-554
Cow position: chr14:45080974-45081241 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 291-555
Cow position: chr14:50110495-50110766 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 295-555
Cow position: chr14:13302953-13303221 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 296-672
Cow position: chr14:17491529-17491117 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 131

Conread position: 296-672
Cow position: chr14:23257286-23257701 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 298-555
Cow position: chr14:45712056-45711790 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 64

Conread position: 305-500
Cow position: chr14:46474781-46474981 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 77, 0

Conread position: 305-550
Cow position: chr14:20782399-20782650 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 305-554
Cow position: chr14:750506-750773 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 200
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 66, 117

Conread position: 305-554
Cow position: chr14:29047967-29047712 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 338-555
Cow position: chr14:48825269-48825492 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 339-673
Cow position: chr14:50138569-50138935 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 200

Conread position: 191-555
Cow position: chr15:40105699-40106058 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 250
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 20, 194

Conread position: 198-553
Cow position: chr15:35735407-35735768 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 226

Conread position: 198-555
Cow position: chr15:16507829-16508186 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 256
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 86

Conread position: 199-552
Cow position: chr15:6622927-6623286 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 249
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 30, 24

Conread position: 210-480
Cow position: chr15:36642784-36643058 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 14

Conread position: 213-511
Cow position: chr15:12615326-12615619 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 209
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 87, 130

Conread position: 217-551
Cow position: chr15:1237545-1237872 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 232
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 10, 15

Conread position: 246-555
Cow position: chr15:4961531-4961839 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 13

Conread position: 251-555
Cow position: chr15:24294983-24295294 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 54

Conread position: 257-663
Cow position: chr15:8750324-8750750 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 25

Conread position: 262-673
Cow position: chr15:7837148-7837594 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 37

Conread position: 265-555
Cow position: chr15:32673640-32673353 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 12

Conread position: 266-555
Cow position: chr15:9912543-9912831 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 10

Conread position: 271-554
Cow position: chr15:12421257-12420967 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 6

Conread position: 274-552
Cow position: chr15:18332916-18332632 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 141

Conread position: 281-428
Cow position: chr15:2924808-2924952 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 8

Conread position: 281-554
Cow position: chr15:42936635-42936907 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr15:315938-315661 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 281-555
Cow position: chr15:4385189-4385463 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 20

Conread position: 281-555
Cow position: chr15:4671350-4671632 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 281-555
Cow position: chr15:6156032-6155749 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 8

Conread position: 281-555
Cow position: chr15:51216510-51216785 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 281-659
Cow position: chr15:21665825-21665414 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 38

Conread position: 281-663
Cow position: chr15:15347198-15346779 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-663
Cow position: chr15:18576635-18577051 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-672
Cow position: chr15:8099409-8099821 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 5

Conread position: 281-673
Cow position: chr15:19738132-19737705 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 285-562
Cow position: chr15:328351-328635 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 279

Conread position: 291-437
Cow position: chr15:4682161-4682312 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 56

Conread position: 291-555
Cow position: chr15:4765135-4765405 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 291-555
Cow position: chr15:17292368-17292642 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 212

Conread position: 296-530
Cow position: chr15:29009768-29010008 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-554
Cow position: chr15:4142889-4142625 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-672
Cow position: chr15:18268058-18267643 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-672
Cow position: chr15:50147007-50147411 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 294
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 75, 169

Conread position: 298-541
Cow position: chr15:41366108-41366353 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 182
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 83, 77

Conread position: 298-555
Cow position: chr15:524924-524661 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 298-555
Cow position: chr15:2076586-2076847 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 17

Conread position: 298-555
Cow position: chr15:35753660-35753397 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 303-554
Cow position: chr15:42320485-42320229 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 163

Conread position: 305-553
Cow position: chr15:3009913-3009660 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 117

Conread position: 308-554
Cow position: chr15:444548-444798 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 194

Conread position: 310-555
Cow position: chr15:3842480-3842225 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 186
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 61, 9

Conread position: 315-555
Cow position: chr15:7894279-7894037 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 111

Conread position: 315-651
Cow position: chr15:32494433-32494061 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 329-555
Cow position: chr15:6078725-6078947 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 179
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 43, 98

Conread position: 329-673
Cow position: chr15:35647699-35647322 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 383-672
Cow position: chr15:32711124-32711437 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 0

Conread position: 178-555
Cow position: chr16:49235349-49234978 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 12

Conread position: 183-672
Cow position: chr16:10376113-10375597 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 333
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 102, 302

Conread position: 185-555
Cow position: chr16:42739619-42739254 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 26

Conread position: 191-555
Cow position: chr16:25156398-25156025 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 191-555
Cow position: chr16:25257417-25257788 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 309

Conread position: 198-555
Cow position: chr16:29033538-29033894 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 27

Conread position: 202-543
Cow position: chr16:18764125-18763785 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 41

Conread position: 245-555
Cow position: chr16:14666274-14665960 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 14

Conread position: 251-673
Cow position: chr16:25085186-25085622 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 44

Conread position: 254-555
Cow position: chr16:1567906-1567601 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 27

Conread position: 257-555
Cow position: chr16:12538374-12538073 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 24

Conread position: 261-663
Cow position: chr16:10437797-10438229 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 19

Conread position: 262-555
Cow position: chr16:2411412-2411115 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 30

Conread position: 262-555
Cow position: chr16:15184360-15184648 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 15

Conread position: 270-412
Cow position: chr16:36361798-36361655 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 12

Conread position: 270-659
Cow position: chr16:25341529-25341945 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 31

Conread position: 270-672
Cow position: chr16:34529885-34530314 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 22

Conread position: 271-555
Cow position: chr16:5483884-5484172 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 6

Conread position: 271-555
Cow position: chr16:10203869-10203587 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 6

Conread position: 281-430
Cow position: chr16:1431731-1431885 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 5

Conread position: 281-555
Cow position: chr16:2727714-2727435 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 281-555
Cow position: chr16:8816530-8816253 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 21

Conread position: 281-555
Cow position: chr16:25441198-25441479 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr16:25457891-25457612 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr16:28471528-28471250 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 281-555
Cow position: chr16:40296604-40296325 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-620
Cow position: chr16:2239166-2238815 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 12

Conread position: 281-673
Cow position: chr16:407457-407031 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 281-673
Cow position: chr16:2483568-2483137 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 11

Conread position: 281-673
Cow position: chr16:29046596-29047025 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 282-555
Cow position: chr16:23982885-23983161 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 19

Conread position: 285-554
Cow position: chr16:31832202-31832477 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 178

Conread position: 295-491
Cow position: chr16:18687542-18687340 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 160
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 76, 0

Conread position: 296-569
Cow position: chr16:28170783-28170509 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 264

Conread position: 305-663
Cow position: chr16:23252910-23252516 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 159

Conread position: 305-672
Cow position: chr16:41163469-41163070 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 335

Conread position: 329-555
Cow position: chr16:24105325-24105555 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 197

Conread position: 187-543
Cow position: chr17:18300344-18299982 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 35

Conread position: 191-545
Cow position: chr17:12670018-12669662 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 37

Conread position: 194-672
Cow position: chr17:15435839-15436365 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 197-667
Cow position: chr17:15156904-15156401 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 41

Conread position: 199-555
Cow position: chr17:15384351-15384711 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 40

Conread position: 210-514
Cow position: chr17:20488075-20488385 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 214
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 29, 208

Conread position: 213-663
Cow position: chr17:42264996-42265471 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 323
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 27, 115

Conread position: 249-672
Cow position: chr17:23324345-23323880 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 255-480
Cow position: chr17:25737790-25738018 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 8, 20

Conread position: 262-658
Cow position: chr17:40804952-40805376 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 31

Conread position: 270-555
Cow position: chr17:15850539-15850828 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 14

Conread position: 271-555
Cow position: chr17:3642697-3642404 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 6

Conread position: 271-555
Cow position: chr17:19269227-19268937 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 6

Conread position: 275-663
Cow position: chr17:6068704-6069121 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 41

Conread position: 281-428
Cow position: chr17:13856619-13856468 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 90, 8

Conread position: 281-554
Cow position: chr17:2579767-2580045 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr17:6259996-6260273 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 11

Conread position: 281-555
Cow position: chr17:11087572-11087296 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 281-555
Cow position: chr17:14894305-14894584 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 27

Conread position: 281-663
Cow position: chr17:18103533-18103123 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 20

Conread position: 281-673
Cow position: chr17:24029848-24029430 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 285-551
Cow position: chr17:43952415-43952143 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 285-554
Cow position: chr17:31767891-31767616 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 285-672
Cow position: chr17:2262250-2262677 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 293-672
Cow position: chr17:22132392-22132804 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 296-463
Cow position: chr17:181522-181693 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 75, 128

Conread position: 296-472
Cow position: chr17:2248425-2248243 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 296-554
Cow position: chr17:228149-227885 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-672
Cow position: chr17:1382655-1382245 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-672
Cow position: chr17:6119867-6120285 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 102

Conread position: 296-672
Cow position: chr17:15143208-15142794 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-672
Cow position: chr17:34156287-34156691 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 32

Conread position: 301-555
Cow position: chr17:20087576-20087317 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 9

Conread position: 305-554
Cow position: chr17:14216858-14216610 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 195
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 168

Conread position: 305-668
Cow position: chr17:20665558-20665155 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 305-672
Cow position: chr17:24782335-24782733 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 148

Conread position: 329-555
Cow position: chr17:151679-151448 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 329-555
Cow position: chr17:5226815-5227046 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 174

Conread position: 330-555
Cow position: chr17:16857325-16857095 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 92

Conread position: 203-673
Cow position: chr18:54171260-54170748 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 39

Conread position: 204-555
Cow position: chr18:8168983-8169340 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 13

Conread position: 210-555
Cow position: chr18:29765250-29765611 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 242-554
Cow position: chr18:33750334-33750649 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 249-552
Cow position: chr18:51342003-51342315 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 256-663
Cow position: chr18:14130725-14131166 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 35

Conread position: 257-549
Cow position: chr18:37505400-37505693 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 24

Conread position: 257-673
Cow position: chr18:14416312-14416768 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 24

Conread position: 270-555
Cow position: chr18:27987413-27987702 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 12

Conread position: 280-554
Cow position: chr18:54023766-54023503 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 12

Conread position: 281-413
Cow position: chr18:24700753-24700616 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 5

Conread position: 281-431
Cow position: chr18:16534338-16534488 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 5

Conread position: 281-554
Cow position: chr18:41840465-41840177 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 34

Conread position: 281-555
Cow position: chr18:27837957-27837678 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr18:33336222-33336503 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 11

Conread position: 281-555
Cow position: chr18:36508692-36508971 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr18:40478742-40479021 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-663
Cow position: chr18:32652562-32652990 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 27

Conread position: 285-555
Cow position: chr18:51481196-51481472 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 160

Conread position: 285-590
Cow position: chr18:54003883-54004184 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 102

Conread position: 305-554
Cow position: chr18:55088548-55088289 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 305-672
Cow position: chr18:11274730-11274324 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 305-672
Cow position: chr18:51462703-51462301 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 316-555
Cow position: chr18:16176225-16175979 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 188

Conread position: 316-673
Cow position: chr18:16088539-16088930 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 325-551
Cow position: chr18:54270910-54271133 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 46, 149

Conread position: 178-548
Cow position: chr19:352392-352017 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 16

Conread position: 187-389
Cow position: chr19:263418-263620 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 30

Conread position: 198-384
Cow position: chr19:35377440-35377629 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 73, 15

Conread position: 203-399
Cow position: chr19:32222738-32222533 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 10

Conread position: 203-555
Cow position: chr19:39669225-39668870 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 10

Conread position: 208-370
Cow position: chr19:43304-43467 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 24

Conread position: 210-673
Cow position: chr19:162811-162319 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 12

Conread position: 213-555
Cow position: chr19:3138227-3138578 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 103

Conread position: 217-456
Cow position: chr19:377281-377033 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 171
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 89

Conread position: 251-555
Cow position: chr19:439106-438799 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 31

Conread position: 254-673
Cow position: chr19:341559-342006 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 307
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 117, 35

Conread position: 257-554
Cow position: chr19:39185205-39184904 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 24

Conread position: 257-555
Cow position: chr19:172552-172847 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 31

Conread position: 262-673
Cow position: chr19:33941957-33942392 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 28

Conread position: 269-412
Cow position: chr19:28376839-28376989 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 20

Conread position: 271-555
Cow position: chr19:204312-204599 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 6

Conread position: 281-547
Cow position: chr19:40817339-40817092 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 90, 5

Conread position: 281-555
Cow position: chr19:893244-892966 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 281-555
Cow position: chr19:7488677-7488954 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 281-555
Cow position: chr19:28581297-28581018 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-673
Cow position: chr19:5729193-5729623 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-673
Cow position: chr19:33873790-33874213 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 282-555
Cow position: chr19:39390873-39391147 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 32

Conread position: 282-673
Cow position: chr19:2274020-2273594 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 7

Conread position: 285-554
Cow position: chr19:32211713-32211438 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 296-554
Cow position: chr19:28593635-28593897 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 206

Conread position: 296-672
Cow position: chr19:52151459-52151047 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 297-514
Cow position: chr19:38267-38491 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 301-555
Cow position: chr19:40852055-40851797 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 172

Conread position: 187-673
Cow position: chr2:39622338-39622839 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 26

Conread position: 191-555
Cow position: chr2:34564894-34564535 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 268
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 20, 34

Conread position: 193-554
Cow position: chr2:63978024-63978390 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 35

Conread position: 198-459
Cow position: chr2:1362885-1363148 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 20

Conread position: 198-663
Cow position: chr2:36030611-36030139 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 15

Conread position: 199-672
Cow position: chr2:36053271-36052780 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 29

Conread position: 200-660
Cow position: chr2:199064-198571 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 80

Conread position: 203-430
Cow position: chr2:78742033-78742269 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 83, 10

Conread position: 203-555
Cow position: chr2:5963357-5962997 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 22

Conread position: 203-672
Cow position: chr2:41686232-41686737 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 307

Conread position: 210-555
Cow position: chr2:28643082-28642737 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 14

Conread position: 213-507
Cow position: chr2:7902757-7903051 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 121

Conread position: 238-555
Cow position: chr2:53329527-53329839 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 7

Conread position: 242-526
Cow position: chr2:49604716-49604989 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 89

Conread position: 246-519
Cow position: chr2:69584857-69584578 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 46

Conread position: 251-673
Cow position: chr2:36980151-36980610 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 31

Conread position: 262-554
Cow position: chr2:10186444-10186152 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 20

Conread position: 262-555
Cow position: chr2:10268871-10268576 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 12

Conread position: 262-555
Cow position: chr2:11159338-11159042 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 7

Conread position: 262-672
Cow position: chr2:65938661-65938222 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 18

Conread position: 262-673
Cow position: chr2:28793040-28793478 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 30

Conread position: 269-575
Cow position: chr2:52062461-52062770 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 46

Conread position: 270-673
Cow position: chr2:13045910-13045475 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 12

Conread position: 275-554
Cow position: chr2:78762259-78762525 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 212
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 17, 10

Conread position: 277-673
Cow position: chr2:5813583-5813164 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 9

Conread position: 281-449
Cow position: chr2:4926370-4926197 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 90, 11

Conread position: 281-555
Cow position: chr2:282886-282608 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr2:24146665-24146943 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 281-555
Cow position: chr2:44991490-44991213 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 5

Conread position: 281-555
Cow position: chr2:81256611-81256892 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 6

Conread position: 282-629
Cow position: chr2:5870552-5870183 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 74

Conread position: 285-437
Cow position: chr2:51990728-51990571 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 86, 132

Conread position: 285-672
Cow position: chr2:51990446-51990027 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 132

Conread position: 296-466
Cow position: chr2:2184443-2184267 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 296-552
Cow position: chr2:39421392-39421652 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 181

Conread position: 296-554
Cow position: chr2:3324751-3324483 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-554
Cow position: chr2:57588509-57588773 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-668
Cow position: chr2:2412983-2412572 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-672
Cow position: chr2:4403344-4402931 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-672
Cow position: chr2:10611813-10611408 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 131

Conread position: 296-672
Cow position: chr2:47038601-47038186 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 296-672
Cow position: chr2:57335009-57335424 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 301-554
Cow position: chr2:19011165-19011424 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 304-554
Cow position: chr2:2380929-2381184 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 113

Conread position: 304-673
Cow position: chr2:10732943-10732545 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 243

Conread position: 305-548
Cow position: chr2:50983400-50983152 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 123

Conread position: 305-554
Cow position: chr2:25030654-25030403 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 123

Conread position: 305-554
Cow position: chr2:28650403-28650150 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 305-555
Cow position: chr2:8118365-8118621 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 305-672
Cow position: chr2:9907735-9908141 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 308-673
Cow position: chr2:16900081-16900481 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 312-673
Cow position: chr2:80293118-80292723 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 328-555
Cow position: chr2:781588-781359 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 41, 139

Conread position: 337-555
Cow position: chr2:16290196-16290420 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 340-555
Cow position: chr2:903893-904101 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 32, 75

Conread position: 465-673
Cow position: chr2:41150614-41150847 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 193-555
Cow position: chr20:31377963-31377607 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 250
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 11, 43

Conread position: 199-419
Cow position: chr20:35105015-35105245 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 74, 14

Conread position: 199-555
Cow position: chr20:20754240-20753887 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 246
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 8, 25

Conread position: 213-555
Cow position: chr20:2790657-2790306 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 240
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 26, 11

Conread position: 235-673
Cow position: chr20:18315034-18314593 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 26

Conread position: 249-672
Cow position: chr20:19438218-19438669 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 319
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 37, 223

Conread position: 251-555
Cow position: chr20:25850700-25850392 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 31

Conread position: 257-555
Cow position: chr20:30684618-30684920 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 24

Conread position: 266-555
Cow position: chr20:35124799-35125096 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 43

Conread position: 268-555
Cow position: chr20:23469359-23469066 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 47

Conread position: 269-480
Cow position: chr20:42076751-42076540 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 102, 13

Conread position: 270-555
Cow position: chr20:13763215-13763504 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 12

Conread position: 270-555
Cow position: chr20:15097566-15097278 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 12

Conread position: 281-554
Cow position: chr20:27869518-27869799 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 48

Conread position: 281-555
Cow position: chr20:3271025-3271298 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 5

Conread position: 281-555
Cow position: chr20:5535258-5535535 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr20:8003905-8003629 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr20:15292331-15292604 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 34

Conread position: 281-555
Cow position: chr20:16179500-16179217 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 11

Conread position: 281-555
Cow position: chr20:28565275-28564994 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 27

Conread position: 281-660
Cow position: chr20:21393914-21394328 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 5

Conread position: 281-673
Cow position: chr20:21914648-21915066 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-673
Cow position: chr20:23799206-23799630 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 20

Conread position: 282-569
Cow position: chr20:28161092-28161379 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 33

Conread position: 282-673
Cow position: chr20:12438439-12438013 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 33

Conread position: 285-554
Cow position: chr20:38350995-38351268 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 54

Conread position: 296-672
Cow position: chr20:823095-823505 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 310-556
Cow position: chr20:42905563-42905804 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 74

Conread position: 322-555
Cow position: chr20:18324814-18324586 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 49, 113

Conread position: 191-663
Cow position: chr21:9892292-9892760 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 89

Conread position: 194-555
Cow position: chr21:27565739-27566121 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 199-555
Cow position: chr21:25975625-25975990 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 253
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 47, 27

Conread position: 201-529
Cow position: chr21:20744145-20743820 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 235
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 171, 15

Conread position: 213-432
Cow position: chr21:6109927-6110154 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 5, 212

Conread position: 215-663
Cow position: chr21:2710881-2711343 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 8

Conread position: 228-555
Cow position: chr21:23812557-23812890 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 112

Conread position: 238-627
Cow position: chr21:359758-360165 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 71

Conread position: 257-555
Cow position: chr21:2883332-2883028 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 257-673
Cow position: chr21:3779183-3779629 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 24

Conread position: 262-555
Cow position: chr21:146345-146641 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 7

Conread position: 266-555
Cow position: chr21:4589566-4589277 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 26

Conread position: 281-412
Cow position: chr21:34293455-34293592 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 5

Conread position: 281-547
Cow position: chr21:10567108-10567379 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr21:30562242-30562516 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 34

Conread position: 281-555
Cow position: chr21:48116541-48116819 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 281-673
Cow position: chr21:35144196-35144623 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-673
Cow position: chr21:40271241-40270811 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 282-555
Cow position: chr21:2416654-2416926 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 10

Conread position: 282-555
Cow position: chr21:28735669-28735947 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 216

Conread position: 285-554
Cow position: chr21:12055565-12055290 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 296-672
Cow position: chr21:37046067-37046482 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-672
Cow position: chr21:37371692-37372101 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 297-554
Cow position: chr21:2511343-2511606 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 301-672
Cow position: chr21:13313224-13313623 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 388

Conread position: 304-663
Cow position: chr21:31559198-31558805 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 305-555
Cow position: chr21:33251969-33252218 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 180

Conread position: 305-672
Cow position: chr21:11506052-11506457 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 308-512
Cow position: chr21:46916046-46916251 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 63, 149

Conread position: 185-380
Cow position: chr22:1283156-1282955 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 39

Conread position: 190-554
Cow position: chr22:37132606-37132964 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 23

Conread position: 191-550
Cow position: chr22:23853837-23854195 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 200

Conread position: 193-663
Cow position: chr22:6502962-6502456 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 95

Conread position: 196-555
Cow position: chr22:1269612-1269250 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 17

Conread position: 201-673
Cow position: chr22:35907208-35906713 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 12

Conread position: 210-549
Cow position: chr22:1322320-1322661 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 68

Conread position: 213-536
Cow position: chr22:13918024-13918355 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 238-663
Cow position: chr22:19143457-19143011 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 7

Conread position: 249-672
Cow position: chr22:693850-694313 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 42

Conread position: 249-672
Cow position: chr22:27284255-27284714 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 172

Conread position: 251-673
Cow position: chr22:34168568-34169027 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 31

Conread position: 256-553
Cow position: chr22:34599645-34599937 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 114, 209

Conread position: 262-555
Cow position: chr22:44396692-44396988 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 37

Conread position: 270-555
Cow position: chr22:17328482-17328194 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 12

Conread position: 271-555
Cow position: chr22:42991426-42991717 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 6

Conread position: 274-438
Cow position: chr22:1522269-1522439 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 274-461
Cow position: chr22:13773152-13773344 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 14, 35

Conread position: 274-554
Cow position: chr22:326912-326629 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 137

Conread position: 281-505
Cow position: chr22:15851581-15851810 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 85, 11

Conread position: 281-553
Cow position: chr22:560438-560165 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr22:31313606-31313884 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-663
Cow position: chr22:31334771-31334356 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-673
Cow position: chr22:39469256-39468832 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 282-554
Cow position: chr22:48004801-48005081 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 10

Conread position: 283-672
Cow position: chr22:5308368-5308788 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 222

Conread position: 283-672
Cow position: chr22:24950357-24950785 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 57

Conread position: 283-673
Cow position: chr22:37072812-37072392 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 301
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 8, 150

Conread position: 285-672
Cow position: chr22:10909570-10909149 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 355

Conread position: 293-554
Cow position: chr22:8739943-8739675 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 296-554
Cow position: chr22:44369351-44369089 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 179

Conread position: 296-672
Cow position: chr22:1879067-1879481 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 44

Conread position: 296-672
Cow position: chr22:3278082-3277670 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 346

Conread position: 296-672
Cow position: chr22:18027553-18027969 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-672
Cow position: chr22:35672082-35671667 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 298-672
Cow position: chr22:5233006-5232592 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 301-554
Cow position: chr22:12731390-12731131 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 303-456
Cow position: chr22:44490166-44490325 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 68, 0

Conread position: 303-663
Cow position: chr22:1520727-1520341 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 143

Conread position: 308-672
Cow position: chr22:6020949-6021350 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 315-555
Cow position: chr22:44934276-44934522 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 187-542
Cow position: chr23:22147080-22146721 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 12

Conread position: 191-504
Cow position: chr23:9545753-9546069 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 230
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 78, 119

Conread position: 191-554
Cow position: chr23:1402321-1401952 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 22

Conread position: 193-555
Cow position: chr23:16615259-16614893 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 95

Conread position: 203-424
Cow position: chr23:22875121-22874913 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 204-673
Cow position: chr23:15219713-15219215 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 82

Conread position: 248-555
Cow position: chr23:20155982-20155670 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 249-672
Cow position: chr23:28217514-28217979 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 250-555
Cow position: chr23:31595011-31594706 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 32

Conread position: 251-640
Cow position: chr23:25683806-25683412 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 260

Conread position: 257-554
Cow position: chr23:5874400-5874110 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 39

Conread position: 261-555
Cow position: chr23:2757843-2758140 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 13

Conread position: 262-555
Cow position: chr23:4888923-4889223 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 227
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 109, 15

Conread position: 266-555
Cow position: chr23:3014642-3014939 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 21

Conread position: 270-554
Cow position: chr23:14974307-14974019 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 219
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 101, 19

Conread position: 270-554
Cow position: chr23:16616589-16616301 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 22

Conread position: 270-668
Cow position: chr23:29452061-29451657 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 15

Conread position: 271-554
Cow position: chr23:4434710-4434997 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 6

Conread position: 281-420
Cow position: chr23:30636034-30635891 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 26

Conread position: 281-504
Cow position: chr23:2026852-2026620 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 179
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 90, 11

Conread position: 281-554
Cow position: chr23:14965485-14965207 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr23:4640357-4640084 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 34

Conread position: 281-555
Cow position: chr23:15177338-15177616 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 281-555
Cow position: chr23:28913660-28913934 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-673
Cow position: chr23:2781947-2781526 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 5

Conread position: 281-673
Cow position: chr23:4510344-4510756 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 296
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 90, 11

Conread position: 281-673
Cow position: chr23:36031110-36030684 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 282-555
Cow position: chr23:11778756-11779034 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 33

Conread position: 285-672
Cow position: chr23:2312977-2312554 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 142

Conread position: 305-672
Cow position: chr23:19950303-19949909 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 35

Conread position: 305-673
Cow position: chr23:19489831-19490233 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 191-555
Cow position: chr24:13302286-13301897 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 269
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 20, 41

Conread position: 192-430
Cow position: chr24:32332281-32332527 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 95, 21

Conread position: 193-554
Cow position: chr24:6048857-6049204 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 236
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 57

Conread position: 195-663
Cow position: chr24:38637804-38638300 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 92

Conread position: 199-555
Cow position: chr24:16648723-16648352 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 258
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 89, 14

Conread position: 203-505
Cow position: chr24:6336119-6336434 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 126

Conread position: 203-555
Cow position: chr24:16472164-16472526 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 103

Conread position: 212-456
Cow position: chr24:36708532-36708797 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 213-456
Cow position: chr24:17313260-17313018 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 11

Conread position: 213-552
Cow position: chr24:36559481-36559134 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 84

Conread position: 213-555
Cow position: chr24:12237515-12237871 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 29

Conread position: 215-555
Cow position: chr24:14333756-14334095 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 62

Conread position: 228-536
Cow position: chr24:7090890-7090556 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 65

Conread position: 233-420
Cow position: chr24:17372103-17371908 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 79, 59

Conread position: 249-554
Cow position: chr24:6646013-6646324 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 249-556
Cow position: chr24:6434550-6434868 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 222
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 37, 0

Conread position: 251-555
Cow position: chr24:19833708-19834017 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 31

Conread position: 257-555
Cow position: chr24:12130643-12130344 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 12

Conread position: 261-481
Cow position: chr24:37217347-37217565 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 175
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 110, 28

Conread position: 261-553
Cow position: chr24:12232644-12232358 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 217
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 34, 178

Conread position: 270-555
Cow position: chr24:12086541-12086828 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 31

Conread position: 270-555
Cow position: chr24:33933709-33933998 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 16

Conread position: 270-663
Cow position: chr24:17696635-17696207 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 12

Conread position: 274-663
Cow position: chr24:4415185-4414767 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 214

Conread position: 281-555
Cow position: chr24:12335422-12335135 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr24:29187636-29187914 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-662
Cow position: chr24:148266-147846 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 285-554
Cow position: chr24:5992880-5992603 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 296-552
Cow position: chr24:33738980-33738717 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-668
Cow position: chr24:43814124-43814534 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 132

Conread position: 303-553
Cow position: chr24:14390186-14389931 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 305-554
Cow position: chr24:7061758-7062018 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 305-554
Cow position: chr24:12484948-12484694 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 23

Conread position: 312-507
Cow position: chr24:16084279-16084080 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 59, 190

Conread position: 315-543
Cow position: chr24:1449638-1449864 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 15, 128

Conread position: 321-672
Cow position: chr24:6084456-6084842 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 198-554
Cow position: chr25:11932885-11932518 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 312

Conread position: 207-462
Cow position: chr25:33665449-33665186 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 25

Conread position: 209-555
Cow position: chr25:18422261-18422611 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 250
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 62, 14

Conread position: 265-555
Cow position: chr25:18274691-18274391 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 269-555
Cow position: chr25:17560340-17560050 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 20

Conread position: 270-554
Cow position: chr25:34014189-34013899 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 12

Conread position: 272-555
Cow position: chr25:8675212-8675503 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 10

Conread position: 279-663
Cow position: chr25:18303706-18304119 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 22

Conread position: 281-555
Cow position: chr25:12942391-12942112 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr25:18889706-18889427 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-673
Cow position: chr25:24659562-24659981 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 282-555
Cow position: chr25:34346707-34346430 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 33

Conread position: 285-672
Cow position: chr25:32580270-32580689 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 291-555
Cow position: chr25:13781348-13781618 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 296-446
Cow position: chr25:35362113-35361957 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 296-554
Cow position: chr25:17589238-17588973 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-555
Cow position: chr25:3378018-3377769 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 76, 23

Conread position: 298-555
Cow position: chr25:9544387-9544647 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 317-555
Cow position: chr25:33244607-33244840 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 184
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 54, 41

Conread position: 192-673
Cow position: chr26:4334067-4333545 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 50

Conread position: 201-387
Cow position: chr26:20255604-20255786 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 85, 12

Conread position: 249-672
Cow position: chr26:15144473-15144008 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 268-553
Cow position: chr26:9563042-9562752 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 48

Conread position: 277-412
Cow position: chr26:23603185-23603042 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 281-555
Cow position: chr26:30589042-30588764 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 281-659
Cow position: chr26:19351184-19350773 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 285-672
Cow position: chr26:8919176-8919585 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 340

Conread position: 296-554
Cow position: chr26:2352023-2351761 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 114

Conread position: 296-672
Cow position: chr26:2198963-2199378 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-672
Cow position: chr26:12588228-12587813 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-672
Cow position: chr26:30783080-30783495 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 305-516
Cow position: chr26:18855434-18855652 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 66, 0

Conread position: 305-569
Cow position: chr26:8870228-8870489 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 110

Conread position: 305-672
Cow position: chr26:18852565-18852972 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 210-443
Cow position: chr27:8567914-8568156 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 13

Conread position: 250-555
Cow position: chr27:15638132-15637827 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 14

Conread position: 270-555
Cow position: chr27:9992946-9992657 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 22

Conread position: 274-529
Cow position: chr27:28078705-28078960 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 198
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 10, 35

Conread position: 274-663
Cow position: chr27:23335423-23335847 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 41

Conread position: 281-555
Cow position: chr27:893474-893753 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 34

Conread position: 281-555
Cow position: chr27:5911130-5911407 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 5

Conread position: 281-673
Cow position: chr27:1209618-1210046 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 38

Conread position: 285-663
Cow position: chr27:25804634-25804236 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 105

Conread position: 294-555
Cow position: chr27:15277791-15277524 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 181

Conread position: 296-672
Cow position: chr27:16034120-16033705 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-672
Cow position: chr27:27752922-27752521 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 188

Conread position: 304-673
Cow position: chr27:9330010-9330418 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 179-555
Cow position: chr28:5813216-5813599 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 73

Conread position: 193-555
Cow position: chr28:10229992-10229631 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 248
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 34, 87

Conread position: 201-554
Cow position: chr28:2989011-2988654 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 134

Conread position: 203-381
Cow position: chr28:32330470-32330293 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 109, 61

Conread position: 203-476
Cow position: chr28:10617588-10617318 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 203
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 179, 10

Conread position: 203-673
Cow position: chr28:10071518-10072011 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 14

Conread position: 204-555
Cow position: chr28:7789717-7789364 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 69

Conread position: 207-359
Cow position: chr28:14946872-14947024 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 209-545
Cow position: chr28:3020503-3020171 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 65

Conread position: 210-555
Cow position: chr28:10497781-10497432 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 13

Conread position: 210-555
Cow position: chr28:10647142-10646805 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 14

Conread position: 213-555
Cow position: chr28:5798001-5798334 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 29

Conread position: 214-437
Cow position: chr28:21359580-21359810 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 50, 80

Conread position: 234-555
Cow position: chr28:1505131-1505455 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 11

Conread position: 238-555
Cow position: chr28:18520173-18519860 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 7

Conread position: 249-555
Cow position: chr28:22233131-22232816 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 249-668
Cow position: chr28:1953398-1953861 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 251-663
Cow position: chr28:22260868-22260426 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 29

Conread position: 251-673
Cow position: chr28:7740762-7741207 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 28

Conread position: 262-553
Cow position: chr28:10581691-10581397 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 20

Conread position: 262-554
Cow position: chr28:7002284-7002578 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 15

Conread position: 262-555
Cow position: chr28:5566439-5566739 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 37

Conread position: 262-673
Cow position: chr28:17667003-17666566 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 37

Conread position: 270-555
Cow position: chr28:17388783-17389072 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 45

Conread position: 281-459
Cow position: chr28:14705360-14705177 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 90, 34

Conread position: 281-554
Cow position: chr28:29820045-29820322 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 33

Conread position: 281-554
Cow position: chr28:32792069-32791789 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr28:1814556-1814279 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr28:2083905-2084182 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 33

Conread position: 281-555
Cow position: chr28:5751394-5751119 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr28:5937787-5938069 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr28:12150615-12150893 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 281-555
Cow position: chr28:26425940-26425661 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 34

Conread position: 281-555
Cow position: chr28:34594290-34594568 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-663
Cow position: chr28:5113987-5113570 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-673
Cow position: chr28:1167570-1167141 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 26

Conread position: 281-673
Cow position: chr28:13460281-13460709 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-673
Cow position: chr28:33252623-33253039 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 282-555
Cow position: chr28:12409916-12409638 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 33

Conread position: 285-554
Cow position: chr28:485255-484980 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 305-661
Cow position: chr28:7822585-7822980 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 307-555
Cow position: chr28:24667946-24668189 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 145

Conread position: 320-672
Cow position: chr28:2724580-2724189 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 321-555
Cow position: chr28:3191896-3191666 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 105

Conread position: 191-555
Cow position: chr29:14085943-14085580 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 89

Conread position: 200-673
Cow position: chr29:105223-105736 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 13

Conread position: 243-554
Cow position: chr29:31181643-31181952 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 150

Conread position: 255-554
Cow position: chr29:48228-47918 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 23

Conread position: 257-555
Cow position: chr29:43322809-43323109 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 23

Conread position: 257-651
Cow position: chr29:19653362-19653769 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 24

Conread position: 257-673
Cow position: chr29:10823715-10823273 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 24

Conread position: 262-673
Cow position: chr29:7430959-7430517 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 37

Conread position: 267-555
Cow position: chr29:34799545-34799254 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 7

Conread position: 270-555
Cow position: chr29:2841109-2840821 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 274-554
Cow position: chr29:32540078-32540363 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 274-554
Cow position: chr29:40502714-40502429 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 27

Conread position: 281-518
Cow position: chr29:42650542-42650785 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 5

Conread position: 281-554
Cow position: chr29:2100122-2100400 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 27

Conread position: 281-554
Cow position: chr29:14586199-14586470 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr29:2690177-2690456 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 34

Conread position: 281-555
Cow position: chr29:6266224-6265944 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr29:20251436-20251714 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 27

Conread position: 281-555
Cow position: chr29:21426753-21426474 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 281-555
Cow position: chr29:23976117-23976390 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 34

Conread position: 281-566
Cow position: chr29:42802402-42802690 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 5

Conread position: 281-663
Cow position: chr29:38227257-38227669 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-673
Cow position: chr29:10647974-10647550 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 27

Conread position: 281-673
Cow position: chr29:26164545-26164126 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 5

Conread position: 281-673
Cow position: chr29:39079435-39079005 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 35

Conread position: 285-554
Cow position: chr29:669784-669510 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 207

Conread position: 285-672
Cow position: chr29:19885343-19885766 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 130

Conread position: 296-554
Cow position: chr29:13582352-13582615 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 189

Conread position: 296-554
Cow position: chr29:15894566-15894302 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-554
Cow position: chr29:45587077-45586813 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-672
Cow position: chr29:610328-609916 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 290
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 75, 139

Conread position: 305-554
Cow position: chr29:7844624-7844879 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 305-554
Cow position: chr29:34925772-34926026 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 177

Conread position: 305-672
Cow position: chr29:16110709-16111078 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 256

Conread position: 323-672
Cow position: chr29:35297180-35297552 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 305

Conread position: 178-555
Cow position: chr3:48230363-48229998 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 13

Conread position: 185-663
Cow position: chr3:6685898-6686415 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 279

Conread position: 191-550
Cow position: chr3:46015753-46016101 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 258
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 267, 22

Conread position: 191-554
Cow position: chr3:66991193-66991554 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 122

Conread position: 192-387
Cow position: chr3:50127616-50127409 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 193-555
Cow position: chr3:42631525-42631891 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 248
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 19, 58

Conread position: 198-521
Cow position: chr3:64357723-64357411 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 19

Conread position: 198-555
Cow position: chr3:32616897-32616527 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 256
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 45

Conread position: 198-600
Cow position: chr3:58947737-58948144 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 27

Conread position: 199-610
Cow position: chr3:26836647-26836261 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 291
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 183, 79

Conread position: 200-555
Cow position: chr3:49333893-49334255 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 218

Conread position: 203-547
Cow position: chr3:31415651-31416000 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 237
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 62, 22

Conread position: 203-555
Cow position: chr3:52864021-52863663 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 10

Conread position: 213-553
Cow position: chr3:18356365-18356031 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 11

Conread position: 228-555
Cow position: chr3:77423950-77424280 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 38

Conread position: 234-673
Cow position: chr3:18463420-18462952 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 84

Conread position: 235-554
Cow position: chr3:3981894-3982213 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 211

Conread position: 238-429
Cow position: chr3:2710792-2710597 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 116
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 133, 77

Conread position: 250-554
Cow position: chr3:23290188-23289870 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 44

Conread position: 251-555
Cow position: chr3:4027922-4028210 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 225
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 131, 27

Conread position: 254-555
Cow position: chr3:75041001-75040696 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 21

Conread position: 255-555
Cow position: chr3:5954016-5953714 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 26

Conread position: 257-673
Cow position: chr3:19756787-19756333 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 30

Conread position: 262-548
Cow position: chr3:7481054-7480769 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 18

Conread position: 262-553
Cow position: chr3:72630248-72630539 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 15

Conread position: 262-555
Cow position: chr3:18542230-18541935 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 18

Conread position: 262-558
Cow position: chr3:594754-595053 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 15

Conread position: 265-555
Cow position: chr3:63003368-63003075 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 36

Conread position: 266-555
Cow position: chr3:49677972-49678264 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 15

Conread position: 268-555
Cow position: chr3:56340243-56339953 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 9

Conread position: 270-555
Cow position: chr3:16073914-16074194 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 200
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 112, 88

Conread position: 270-555
Cow position: chr3:49137355-49137074 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 45

Conread position: 270-555
Cow position: chr3:59861551-59861839 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 14

Conread position: 271-555
Cow position: chr3:5995515-5995229 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 6

Conread position: 274-519
Cow position: chr3:45774231-45773971 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 274-553
Cow position: chr3:50915514-50915796 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 15

Conread position: 274-555
Cow position: chr3:66620358-66620648 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 279-554
Cow position: chr3:14439576-14439295 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 61

Conread position: 281-449
Cow position: chr3:48060637-48060463 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 27

Conread position: 281-554
Cow position: chr3:40823582-40823859 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr3:5883733-5884011 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 20

Conread position: 281-555
Cow position: chr3:10239848-10240128 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr3:30314762-30315026 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr3:57484535-57484258 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 281-555
Cow position: chr3:78027215-78026952 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 210
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 90, 34

Conread position: 281-663
Cow position: chr3:42432426-42432826 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 11

Conread position: 284-555
Cow position: chr3:6878858-6878596 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 17

Conread position: 285-552
Cow position: chr3:49613786-49613512 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 285-672
Cow position: chr3:22336079-22336505 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 291-431
Cow position: chr3:19944247-19944393 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 296-554
Cow position: chr3:29331069-29330805 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-554
Cow position: chr3:46861101-46860837 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-663
Cow position: chr3:32622835-32622437 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-671
Cow position: chr3:46679633-46680043 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 206

Conread position: 296-672
Cow position: chr3:3523223-3523636 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 183

Conread position: 296-672
Cow position: chr3:18859616-18860027 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 133

Conread position: 296-672
Cow position: chr3:24314669-24315083 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 171

Conread position: 296-672
Cow position: chr3:36117864-36118278 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 225

Conread position: 296-672
Cow position: chr3:37969250-37969659 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 176

Conread position: 296-672
Cow position: chr3:40339910-40339498 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-672
Cow position: chr3:64027884-64027469 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-672
Cow position: chr3:66890761-66890349 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 346

Conread position: 296-672
Cow position: chr3:68873553-68873139 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 408

Conread position: 298-673
Cow position: chr3:45895347-45894935 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 215

Conread position: 298-673
Cow position: chr3:45974708-45975118 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 213

Conread position: 301-553
Cow position: chr3:50011884-50012138 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 100

Conread position: 304-673
Cow position: chr3:49544994-49544591 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 147

Conread position: 305-552
Cow position: chr3:68699762-68699502 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 195
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 67, 0

Conread position: 305-672
Cow position: chr3:20380754-20381157 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 305-672
Cow position: chr3:64650837-64651243 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 308-672
Cow position: chr3:6782598-6782987 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 194

Conread position: 319-535
Cow position: chr3:74439528-74439750 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 191-673
Cow position: chr4:46664419-46664944 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 22

Conread position: 202-553
Cow position: chr4:34184601-34184259 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 26

Conread position: 217-555
Cow position: chr4:60264229-60263886 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 132

Conread position: 249-672
Cow position: chr4:5880122-5880587 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 255-556
Cow position: chr4:12607688-12607393 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 90

Conread position: 257-672
Cow position: chr4:31669248-31669697 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 21

Conread position: 268-555
Cow position: chr4:18516883-18517171 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 35

Conread position: 269-555
Cow position: chr4:25599511-25599224 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 24

Conread position: 270-555
Cow position: chr4:355899-356185 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 12

Conread position: 270-555
Cow position: chr4:17926265-17925976 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 20

Conread position: 270-673
Cow position: chr4:43881098-43881528 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 22

Conread position: 274-555
Cow position: chr4:16359874-16360160 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 41

Conread position: 280-555
Cow position: chr4:12241219-12240935 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 35

Conread position: 281-524
Cow position: chr4:33493824-33494072 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 20

Conread position: 281-554
Cow position: chr4:45049299-45049021 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 26

Conread position: 281-555
Cow position: chr4:31565304-31565029 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 8

Conread position: 281-555
Cow position: chr4:36896367-36896646 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr4:43319647-43319368 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 26

Conread position: 281-555
Cow position: chr4:44725083-44725362 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 34

Conread position: 281-555
Cow position: chr4:48026396-48026676 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 11

Conread position: 281-673
Cow position: chr4:6490365-6489940 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 296-569
Cow position: chr4:4416089-4416357 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 75, 23

Conread position: 296-672
Cow position: chr4:100927-100512 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-672
Cow position: chr4:3125802-3126213 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 298-488
Cow position: chr4:27333443-27333639 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 74, 0

Conread position: 303-555
Cow position: chr4:11111403-11111144 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 64

Conread position: 305-672
Cow position: chr4:1930608-1930207 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 102

Conread position: 312-555
Cow position: chr4:21256377-21256627 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 182

Conread position: 185-452
Cow position: chr5:41961938-41961673 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 202
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 179, 85

Conread position: 185-672
Cow position: chr5:3964446-3964965 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 9

Conread position: 191-673
Cow position: chr5:41528755-41528257 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 64

Conread position: 192-554
Cow position: chr5:14785371-14784996 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 270
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 22, 33

Conread position: 199-554
Cow position: chr5:39246992-39246636 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 18

Conread position: 203-403
Cow position: chr5:25000211-25000002 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 94, 84

Conread position: 214-554
Cow position: chr5:46660068-46660403 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 10

Conread position: 249-672
Cow position: chr5:4019147-4018684 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 168

Conread position: 262-552
Cow position: chr5:24588834-24589128 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 195
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 25

Conread position: 262-673
Cow position: chr5:73489484-73489040 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 24

Conread position: 267-555
Cow position: chr5:46738497-46738207 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 14

Conread position: 270-555
Cow position: chr5:37732430-37732718 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 22

Conread position: 271-555
Cow position: chr5:7273909-7274198 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 7

Conread position: 274-455
Cow position: chr5:32945959-32946147 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 18, 0

Conread position: 280-663
Cow position: chr5:29435485-29435092 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 278
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 9, 169

Conread position: 281-542
Cow position: chr5:49119187-49118922 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 221

Conread position: 281-551
Cow position: chr5:55628080-55628354 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 20

Conread position: 281-555
Cow position: chr5:415628-415350 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 281-555
Cow position: chr5:2914542-2914817 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 26

Conread position: 281-555
Cow position: chr5:30579416-30579697 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 33

Conread position: 281-555
Cow position: chr5:57482452-57482172 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-673
Cow position: chr5:4385340-4385761 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 5

Conread position: 282-555
Cow position: chr5:64781923-64781645 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 33

Conread position: 285-672
Cow position: chr5:14380239-14380658 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 105

Conread position: 285-672
Cow position: chr5:27909182-27908756 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 285-672
Cow position: chr5:59060708-59061130 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 296-554
Cow position: chr5:18666095-18666359 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-554
Cow position: chr5:48468178-48467914 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-672
Cow position: chr5:6588919-6588505 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 166

Conread position: 296-672
Cow position: chr5:31706675-31707067 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 266

Conread position: 296-673
Cow position: chr5:31101519-31101107 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 305-554
Cow position: chr5:10843309-10843052 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 305-555
Cow position: chr5:54932108-54931853 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 161

Conread position: 305-672
Cow position: chr5:10776154-10775751 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 312-555
Cow position: chr5:34696725-34696970 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 176

Conread position: 329-555
Cow position: chr5:4069355-4069587 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 337-673
Cow position: chr5:3786074-3786440 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 427-673
Cow position: chr5:49591853-49591577 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 204
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 27, 0

Conread position: 193-437
Cow position: chr6:6476015-6475762 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 181
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 105, 96

Conread position: 203-663
Cow position: chr6:10643707-10644188 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 23

Conread position: 207-548
Cow position: chr6:7179110-7178773 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 23

Conread position: 235-518
Cow position: chr6:44550912-44550614 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 217
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 61, 54

Conread position: 249-464
Cow position: chr6:28491321-28491096 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 250-554
Cow position: chr6:65821932-65821612 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 226
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 36, 0

Conread position: 250-569
Cow position: chr6:27169775-27170099 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 256

Conread position: 250-672
Cow position: chr6:16052074-16052538 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 35

Conread position: 250-672
Cow position: chr6:17598085-17597633 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 143

Conread position: 253-555
Cow position: chr6:38900966-38900657 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 19, 275

Conread position: 255-555
Cow position: chr6:29311702-29312006 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 15

Conread position: 257-419
Cow position: chr6:913866-914032 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 6, 39

Conread position: 257-673
Cow position: chr6:6566818-6567247 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 29

Conread position: 261-659
Cow position: chr6:65841802-65842228 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 55

Conread position: 262-554
Cow position: chr6:47042980-47042685 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 15

Conread position: 262-555
Cow position: chr6:36526265-36526563 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 31

Conread position: 262-673
Cow position: chr6:25214473-25214882 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 28

Conread position: 267-673
Cow position: chr6:1822410-1821968 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 24

Conread position: 268-555
Cow position: chr6:17046277-17046568 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 24

Conread position: 268-555
Cow position: chr6:20560890-20560598 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 48

Conread position: 272-554
Cow position: chr6:65928189-65928477 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 274-480
Cow position: chr6:4508198-4507986 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 97, 0

Conread position: 281-552
Cow position: chr6:52693259-52693533 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 5

Conread position: 281-553
Cow position: chr6:64715465-64715742 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 281-554
Cow position: chr6:40867325-40867048 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 281-555
Cow position: chr6:3277714-3277440 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 281-555
Cow position: chr6:8201973-8202251 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr6:8761069-8760791 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 33

Conread position: 281-555
Cow position: chr6:13317269-13316993 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 11

Conread position: 281-555
Cow position: chr6:30274943-30274664 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 26

Conread position: 281-555
Cow position: chr6:34892770-34892491 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr6:58026989-58027262 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 20

Conread position: 281-673
Cow position: chr6:35876482-35876054 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 24

Conread position: 282-555
Cow position: chr6:5949542-5949266 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 33

Conread position: 282-555
Cow position: chr6:28105614-28105345 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 12

Conread position: 283-554
Cow position: chr6:28063566-28063842 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 246

Conread position: 285-465
Cow position: chr6:58408680-58408494 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 88, 0

Conread position: 296-554
Cow position: chr6:39908770-39909034 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-555
Cow position: chr6:51086189-51086453 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 26

Conread position: 304-555
Cow position: chr6:15280298-15280043 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 124

Conread position: 304-673
Cow position: chr6:15140926-15140523 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 124

Conread position: 305-554
Cow position: chr6:13104310-13104564 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 129

Conread position: 305-554
Cow position: chr6:13847277-13847535 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 305-555
Cow position: chr6:55544068-55543811 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 305-662
Cow position: chr6:331214-330818 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 305-673
Cow position: chr6:28275235-28275642 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 190-555
Cow position: chr7:7294431-7294066 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 253
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 12, 198

Conread position: 191-555
Cow position: chr7:4415603-4415977 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 264

Conread position: 191-555
Cow position: chr7:58993821-58994192 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 33

Conread position: 194-554
Cow position: chr7:48634668-48635034 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 20

Conread position: 196-430
Cow position: chr7:54644275-54644036 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 38, 27

Conread position: 201-427
Cow position: chr7:39107677-39107443 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 89, 12

Conread position: 202-555
Cow position: chr7:29470713-29471055 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 20

Conread position: 203-384
Cow position: chr7:3155365-3155545 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 168, 14

Conread position: 203-663
Cow position: chr7:21310749-21311180 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 10

Conread position: 214-490
Cow position: chr7:59683537-59683810 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 207
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 157, 73

Conread position: 219-429
Cow position: chr7:1734528-1734311 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 132

Conread position: 231-438
Cow position: chr7:55280065-55279857 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 140, 48

Conread position: 233-555
Cow position: chr7:33073008-33072682 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 233
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 40, 62

Conread position: 243-672
Cow position: chr7:25439787-25440258 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 250-553
Cow position: chr7:63951129-63950824 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 213
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 121, 19

Conread position: 254-555
Cow position: chr7:21127363-21127060 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 27

Conread position: 257-555
Cow position: chr7:10431115-10430820 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 24

Conread position: 257-555
Cow position: chr7:34149401-34149703 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 24

Conread position: 262-555
Cow position: chr7:46901772-46901478 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 37

Conread position: 269-555
Cow position: chr7:24057749-24058034 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 61, 32

Conread position: 270-501
Cow position: chr7:54603167-54603402 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 100, 22

Conread position: 270-554
Cow position: chr7:33405926-33405638 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 31

Conread position: 270-555
Cow position: chr7:446315-446030 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 22

Conread position: 274-556
Cow position: chr7:68232257-68232538 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 13

Conread position: 281-540
Cow position: chr7:19924501-19924235 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr7:5183731-5184007 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 5

Conread position: 281-555
Cow position: chr7:21929468-21929747 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 5

Conread position: 281-555
Cow position: chr7:27786946-27787233 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 5

Conread position: 281-673
Cow position: chr7:14139275-14138845 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-673
Cow position: chr7:34486240-34486664 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-673
Cow position: chr7:45948826-45948400 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-673
Cow position: chr7:67799177-67799584 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 282-673
Cow position: chr7:21234685-21234264 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 32

Conread position: 285-672
Cow position: chr7:20515450-20515028 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 356

Conread position: 296-554
Cow position: chr7:16539-16276 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 166

Conread position: 296-554
Cow position: chr7:21320489-21320753 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-554
Cow position: chr7:60463482-60463746 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-554
Cow position: chr7:61559546-61559810 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-668
Cow position: chr7:3300823-3300412 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-672
Cow position: chr7:11446889-11447305 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 299-555
Cow position: chr7:25250440-25250704 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 73, 0

Conread position: 305-554
Cow position: chr7:20799104-20798842 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 305-672
Cow position: chr7:6648314-6647909 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 305-672
Cow position: chr7:7257535-7257922 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 269
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 66, 85

Conread position: 305-673
Cow position: chr7:55537572-55537170 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 122

Conread position: 308-554
Cow position: chr7:38536749-38537001 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 308-555
Cow position: chr7:29369941-29369695 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 21

Conread position: 337-672
Cow position: chr7:1450750-1451106 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 206

Conread position: 339-673
Cow position: chr7:525353-525725 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 191-555
Cow position: chr8:42468162-42468507 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 254
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 178, 22

Conread position: 194-556
Cow position: chr8:47673581-47673944 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 100

Conread position: 202-673
Cow position: chr8:24419765-24419284 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 11

Conread position: 204-525
Cow position: chr8:61034587-61034257 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 21

Conread position: 208-555
Cow position: chr8:24874683-24874326 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 242
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 20, 58

Conread position: 210-672
Cow position: chr8:42160975-42160490 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 275

Conread position: 213-473
Cow position: chr8:45692699-45692449 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 186
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 159, 48

Conread position: 213-555
Cow position: chr8:38606755-38606408 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 256

Conread position: 225-485
Cow position: chr8:12717426-12717682 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 35, 6

Conread position: 237-672
Cow position: chr8:1153849-1153374 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 81

Conread position: 243-446
Cow position: chr8:33430866-33431083 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 245-673
Cow position: chr8:3856539-3856078 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 47

Conread position: 248-555
Cow position: chr8:25522880-25523193 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 33

Conread position: 249-554
Cow position: chr8:8518113-8517799 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 250-554
Cow position: chr8:8556677-8556363 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 253-555
Cow position: chr8:45160590-45160283 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 38

Conread position: 257-555
Cow position: chr8:17311508-17311811 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 36

Conread position: 259-426
Cow position: chr8:45316613-45316440 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 34

Conread position: 262-663
Cow position: chr8:12449444-12449880 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 17

Conread position: 262-663
Cow position: chr8:25776177-25775740 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 7

Conread position: 262-672
Cow position: chr8:19050972-19051412 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 12

Conread position: 262-673
Cow position: chr8:4686889-4687339 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 54

Conread position: 270-533
Cow position: chr8:8229278-8229012 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 16

Conread position: 270-673
Cow position: chr8:46944416-46943971 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 19

Conread position: 274-554
Cow position: chr8:11821816-11822099 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 67

Conread position: 274-555
Cow position: chr8:11832204-11832495 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 18

Conread position: 281-532
Cow position: chr8:10743117-10742862 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 281-554
Cow position: chr8:33588887-33589165 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr8:7161405-7161683 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr8:11802333-11802612 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 281-555
Cow position: chr8:23771148-23771426 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr8:39195704-39195423 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr8:44244060-44243782 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 281-555
Cow position: chr8:47885534-47885813 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 281-673
Cow position: chr8:5016694-5017116 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-673
Cow position: chr8:14591389-14590965 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-673
Cow position: chr8:32319036-32318614 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-673
Cow position: chr8:36636031-36635605 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-673
Cow position: chr8:47661812-47661383 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 27

Conread position: 282-555
Cow position: chr8:42484426-42484704 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 33

Conread position: 285-554
Cow position: chr8:27578911-27579181 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 291-627
Cow position: chr8:51667773-51667427 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 333

Conread position: 296-663
Cow position: chr8:21158307-21157918 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 85

Conread position: 296-672
Cow position: chr8:2886271-2886684 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 118

Conread position: 296-672
Cow position: chr8:34348198-34348609 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 296-672
Cow position: chr8:37931611-37932026 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 301-668
Cow position: chr8:8315925-8315533 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 304-555
Cow position: chr8:24915808-24915550 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 305-554
Cow position: chr8:30891786-30891532 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 123

Conread position: 305-555
Cow position: chr8:19330271-19330527 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 193

Conread position: 305-668
Cow position: chr8:9735776-9736172 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 305-672
Cow position: chr8:32631498-32631092 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 311-673
Cow position: chr8:50994327-50994712 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 181

Conread position: 330-549
Cow position: chr8:34108403-34108631 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 41, 172

Conread position: 185-343
Cow position: chr9:34721536-34721700 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 185-552
Cow position: chr9:13476824-13476446 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 46

Conread position: 187-407
Cow position: chr9:2000938-2000706 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 80, 26

Conread position: 187-506
Cow position: chr9:3354613-3354290 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 232
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 184, 38

Conread position: 193-555
Cow position: chr9:4281842-4282214 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 253
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 29, 39

Conread position: 194-417
Cow position: chr9:9705638-9705867 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 61, 45

Conread position: 194-673
Cow position: chr9:44818261-44818761 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 19

Conread position: 198-555
Cow position: chr9:3803421-3803781 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 77

Conread position: 201-555
Cow position: chr9:42555998-42556365 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 204-555
Cow position: chr9:28688181-28688548 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 32

Conread position: 207-555
Cow position: chr9:59511471-59511826 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 245
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 27, 97

Conread position: 213-554
Cow position: chr9:64119322-64119658 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 11

Conread position: 220-533
Cow position: chr9:60464530-60464212 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 211
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 78, 69

Conread position: 242-672
Cow position: chr9:45873464-45873930 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 164

Conread position: 249-514
Cow position: chr9:25483995-25484267 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 37, 0

Conread position: 249-554
Cow position: chr9:131067-130752 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 249-672
Cow position: chr9:28678095-28678557 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 250-672
Cow position: chr9:64018336-64017875 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 55

Conread position: 262-555
Cow position: chr9:59174012-59173709 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 15

Conread position: 263-663
Cow position: chr9:37162666-37162235 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 27

Conread position: 266-555
Cow position: chr9:1980135-1980428 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 32

Conread position: 270-555
Cow position: chr9:7002937-7003226 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 28

Conread position: 270-555
Cow position: chr9:22653717-22654010 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 270-555
Cow position: chr9:59536250-59536534 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 19

Conread position: 270-673
Cow position: chr9:18509648-18509210 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 12

Conread position: 271-581
Cow position: chr9:2171210-2171524 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 176

Conread position: 271-663
Cow position: chr9:5004151-5004553 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 6

Conread position: 281-552
Cow position: chr9:37971046-37970770 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 27

Conread position: 281-555
Cow position: chr9:4532656-4532935 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 33

Conread position: 281-555
Cow position: chr9:6830344-6830067 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 281-555
Cow position: chr9:60277857-60277579 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 282-552
Cow position: chr9:59444011-59444285 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 204
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 90, 7

Conread position: 282-663
Cow position: chr9:9013264-9013679 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 33

Conread position: 282-673
Cow position: chr9:16175933-16176360 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 33

Conread position: 283-663
Cow position: chr9:27034847-27035261 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 32

Conread position: 285-516
Cow position: chr9:60651551-60651314 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 176
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 86, 0

Conread position: 285-550
Cow position: chr9:25755062-25754792 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 244

Conread position: 285-554
Cow position: chr9:780643-780368 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 289-554
Cow position: chr9:31064598-31064869 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 291-555
Cow position: chr9:3566678-3566398 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 295-554
Cow position: chr9:28021975-28022241 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 119

Conread position: 296-554
Cow position: chr9:25035673-25035409 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-554
Cow position: chr9:36724674-36724938 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-554
Cow position: chr9:49177655-49177391 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-672
Cow position: chr9:51210854-51211269 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 298-476
Cow position: chr9:2487956-2487776 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 42

Conread position: 305-541
Cow position: chr9:16268553-16268795 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 305-554
Cow position: chr9:6050861-6050608 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 123

Conread position: 305-555
Cow position: chr9:42309869-42310125 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 308-554
Cow position: chr9:1076013-1075761 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 308-672
Cow position: chr9:30826866-30827264 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 144

Conread position: 331-555
Cow position: chr9:3543052-3543282 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 187-555
Cow position: chrX:6282772-6282406 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 138

Conread position: 191-548
Cow position: chrX:17667917-17667556 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 26

Conread position: 191-555
Cow position: chrX:22130275-22129895 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 33

Conread position: 191-672
Cow position: chrX:44387100-44387613 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 286

Conread position: 193-555
Cow position: chrX:18534470-18534814 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 31

Conread position: 196-555
Cow position: chrX:40246897-40246531 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 203-548
Cow position: chrX:6250442-6250092 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 235
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 59, 41

Conread position: 203-555
Cow position: chrX:10417316-10416949 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 263
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 9, 20

Conread position: 206-555
Cow position: chrX:24112829-24112484 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 72

Conread position: 210-432
Cow position: chrX:16016679-16016452 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 23

Conread position: 213-555
Cow position: chrX:2536458-2536103 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 213-663
Cow position: chrX:13053030-13053490 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 85

Conread position: 218-555
Cow position: chrX:31081972-31082318 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 243
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 89, 7

Conread position: 227-672
Cow position: chrX:11464996-11464509 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 242-534
Cow position: chrX:22814440-22814718 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 249-554
Cow position: chrX:10531530-10531216 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 249-554
Cow position: chrX:18219425-18219739 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 249-555
Cow position: chrX:21829562-21829874 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 53

Conread position: 251-536
Cow position: chrX:5299181-5298893 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 35

Conread position: 251-555
Cow position: chrX:21058836-21059131 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 226
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 121, 14

Conread position: 251-672
Cow position: chrX:21490228-21490678 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 53

Conread position: 251-673
Cow position: chrX:22488222-22488641 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 302
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 7, 50

Conread position: 251-673
Cow position: chrX:29285478-29285934 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 222

Conread position: 254-555
Cow position: chrX:16699345-16699650 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 27

Conread position: 254-663
Cow position: chrX:30183849-30183434 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 27

Conread position: 257-459
Cow position: chrX:18954477-18954271 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 165
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 6, 32

Conread position: 257-673
Cow position: chrX:26528024-26528472 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 21

Conread position: 261-555
Cow position: chrX:20697045-20696756 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 90, 104

Conread position: 262-555
Cow position: chrX:2482584-2482286 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 20

Conread position: 262-555
Cow position: chrX:29096255-29096551 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 17

Conread position: 266-477
Cow position: chrX:28603397-28603190 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 105, 10

Conread position: 266-554
Cow position: chrX:30056707-30057002 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 10

Conread position: 269-673
Cow position: chrX:12478782-12479201 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 17

Conread position: 270-554
Cow position: chrX:23391538-23391250 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 12

Conread position: 270-673
Cow position: chrX:29794058-29793628 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 14

Conread position: 275-668
Cow position: chrX:1833883-1834307 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 65

Conread position: 281-555
Cow position: chrX:15127171-15126893 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 34

Conread position: 281-555
Cow position: chrX:23277091-23277368 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 8

Conread position: 281-555
Cow position: chrX:26767127-26766849 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 5

Conread position: 281-673
Cow position: chrX:21222999-21223420 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 34

Conread position: 281-673
Cow position: chrX:29853498-29853071 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 27

Conread position: 282-554
Cow position: chrX:16812531-16812254 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 239

Conread position: 285-554
Cow position: chrX:2562790-2562515 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 285-554
Cow position: chrX:7751967-7752241 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 137

Conread position: 285-554
Cow position: chrX:12343023-12343296 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 163

Conread position: 285-554
Cow position: chrX:12353307-12353582 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 285-554
Cow position: chrX:12654693-12654420 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 216

Conread position: 285-554
Cow position: chrX:12803797-12803523 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 253

Conread position: 285-554
Cow position: chrX:13398053-13397778 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 285-554
Cow position: chrX:20359984-20359709 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 285-554
Cow position: chrX:27426253-27425978 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 285-569
Cow position: chrX:28585047-28585334 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 277

Conread position: 285-672
Cow position: chrX:13076630-13076204 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 285-672
Cow position: chrX:13097204-13096778 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 286-673
Cow position: chrX:26758530-26758117 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 29

Conread position: 291-542
Cow position: chrX:23019404-23019660 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 296-436
Cow position: chrX:507325-507471 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 296-544
Cow position: chrX:8454830-8455086 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-552
Cow position: chrX:30055657-30055395 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-554
Cow position: chrX:2101937-2102200 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 157

Conread position: 296-554
Cow position: chrX:2604126-2604390 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-569
Cow position: chrX:9125433-9125717 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 210
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 74, 239

Conread position: 296-575
Cow position: chrX:17478444-17478159 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 179
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 75, 0

Conread position: 296-663
Cow position: chrX:21304448-21304041 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-672
Cow position: chrX:5863476-5863887 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 206

Conread position: 296-672
Cow position: chrX:18659704-18659295 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 296-672
Cow position: chrX:21340482-21340893 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-672
Cow position: chrX:28634338-28633934 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 126

Conread position: 296-672
Cow position: chrX:31493498-31493911 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 296-672
Cow position: chrX:37849093-37849506 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 101

Conread position: 301-427
Cow position: chrX:24136314-24136183 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 70, 113

Conread position: 304-555
Cow position: chrX:23041034-23040779 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 173

Conread position: 305-443
Cow position: chrX:31187159-31187015 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 305-494
Cow position: chrX:29947794-29947989 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 66, 0

Conread position: 305-550
Cow position: chrX:31198534-31198785 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 305-554
Cow position: chrX:5336399-5336144 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 305-554
Cow position: chrX:7030273-7030526 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 117

Conread position: 305-554
Cow position: chrX:7093685-7093940 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 305-554
Cow position: chrX:14594858-14595113 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 305-672
Cow position: chrX:3421098-3420713 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 123

Conread position: 305-672
Cow position: chrX:20315968-20315569 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 82

Conread position: 305-672
Cow position: chrX:22525517-22525111 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 305-672
Cow position: chrX:26400090-26399688 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 308-554
Cow position: chrX:24089491-24089744 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 193
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 62, 171

Conread position: 308-555
Cow position: chrX:13413043-13412789 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 309-668
Cow position: chrX:5323632-5323234 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 309-672
Cow position: chrX:8588269-8588671 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 310-554
Cow position: chrX:29950492-29950240 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 319-672
Cow position: chrX:3376011-3375619 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 331-673
Cow position: chrX:21589087-21589462 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 346

Conread position: 337-548
Cow position: chrX:5833312-5833095 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0