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Cow genome map

           
Conread name:
           
Ova1-OVRM10212F12
        

               
Conread position:
               
1-174
               

               
Cow position:
               
chr1:59648285-59648453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
143, 39
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr1:43570422-43570219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
84, 40
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr1:84226800-84227003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
164, 39
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr1:7141795-7141590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
129, 39
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr1:30063367-30063608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
174, 42
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr1:93855510-93855792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
97, 39
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr1:22843634-22843924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
136, 39
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr1:42737451-42737724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
92, 39
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr1:44100403-44100125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
139, 20
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr1:57972712-57972428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
130, 39
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr1:65387313-65387598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
180, 39
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr1:15027354-15027635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
175, 27
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr1:44972312-44972600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
120, 39
               

               
Conread position:
               
2-175
               

               
Cow position:
               
chr1:67287815-67287989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chr1:18026804-18026607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
2-202
               

               
Cow position:
               
chr1:31365103-31364905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr1:17011739-17011538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
155, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr1:85792673-85792875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr1:91900012-91900220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr1:67292625-67292832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
162, 38
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr1:99019015-99018800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
125, 38
               

               
Conread position:
               
2-231
               

               
Cow position:
               
chr1:18274187-18274417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
96, 38
               

               
Conread position:
               
2-245
               

               
Cow position:
               
chr1:55321078-55320831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
163, 39
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr1:39544786-39545058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr1:82912143-82911883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
207, 40
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr1:33852282-33852551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
176, 38
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr1:40575208-40575485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr1:57697171-57696884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
75, 38
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr1:59209155-59208872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-272
               

               
Cow position:
               
chr1:31402469-31402199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
2-272
               

               
Cow position:
               
chr1:98658913-98658634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
165, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr1:3934266-3933980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr1:32566927-32566647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr1:32908814-32909105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
134, 12
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr1:73198030-73197745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 39
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr1:74285795-74285511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
180, 41
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr1:79111483-79111765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
193, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr1:91892124-91891843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr1:94660669-94660952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
179, 37
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr1:102781301-102781036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
218, 37
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr1:80358182-80357896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr1:101861070-101860790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
174, 38
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr1:62243649-62243372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-350
               

               
Cow position:
               
chr1:16216681-16216340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
174, 29
               

               
Conread position:
               
3-193
               

               
Cow position:
               
chr1:53364552-53364740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
158, 37
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chr1:70419385-70419177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
173, 37
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr1:16581509-16581290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr1:16587085-16586866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
4-195
               

               
Cow position:
               
chr1:77510768-77510581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
181, 36
               

               
Conread position:
               
4-277
               

               
Cow position:
               
chr1:55156005-55155717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
172, 36
               

               
Conread position:
               
6-217
               

               
Cow position:
               
chr1:29039038-29039249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
144, 8
               

               
Conread position:
               
8-274
               

               
Cow position:
               
chr1:40438177-40437906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
70, 34
               

               
Conread position:
               
10-274
               

               
Cow position:
               
chr1:63502828-63503093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
149, 30
               

               
Conread position:
               
10-277
               

               
Cow position:
               
chr1:86611144-86611417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
151, 30
               

               
Conread position:
               
17-213
               

               
Cow position:
               
chr1:30519607-30519801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
144, 23
               

               
Conread position:
               
37-205
               

               
Cow position:
               
chr1:57423809-57423638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
38-216
               

               
Cow position:
               
chr1:31193691-31193509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
53, 7
               

               
Conread position:
               
54-271
               

               
Cow position:
               
chr1:81777478-81777698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
127, 166
               

               
Conread position:
               
60-272
               

               
Cow position:
               
chr1:51877957-51877732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
47, 38
               

               
Conread position:
               
61-183
               

               
Cow position:
               
chr1:85398109-85398233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
107-279
               

               
Cow position:
               
chr1:13581882-13581703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr10:24311349-24311135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
164, 39
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr10:40640976-40641192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
175, 39
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr10:57501836-57502042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr10:21078661-21078923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
101, 17
               

               
Conread position:
               
2-202
               

               
Cow position:
               
chr10:42752148-42752347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
131, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr10:1665517-1665315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr10:14804861-14805062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr10:31538807-31539008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
111, 39
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr10:34286275-34286477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr10:41568117-41568317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr10:55094284-55094496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
145, 38
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr10:47907948-47908166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
85, 38
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr10:19495263-19494995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr10:28256399-28256124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr10:187115-187393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
216, 9
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr10:19840698-19840981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr10:29845630-29845347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr10:40151228-40150954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr10:11821770-11822042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
98, 38
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr10:38544900-38544627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
191, 39
               

               
Conread position:
               
3-279
               

               
Cow position:
               
chr10:24976750-24976471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
173, 37
               

               
Conread position:
               
6-278
               

               
Cow position:
               
chr10:36469428-36469149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
7, 35
               

               
Conread position:
               
7-270
               

               
Cow position:
               
chr10:14842804-14843075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
91, 21
               

               
Conread position:
               
10-274
               

               
Cow position:
               
chr10:64145953-64146228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
156, 36
               

               
Conread position:
               
11-271
               

               
Cow position:
               
chr10:8326295-8326037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
7, 31
               

               
Conread position:
               
38-276
               

               
Cow position:
               
chr10:50135618-50135874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
40-268
               

               
Cow position:
               
chr10:32429781-32430023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
47-248
               

               
Cow position:
               
chr10:20375775-20375571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
41, 31
               

               
Conread position:
               
60-205
               

               
Cow position:
               
chr10:7897412-7897266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr11:15898336-15898135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr11:36763405-36763683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
104, 39
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr11:23127243-23126937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
164, 39
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr11:19063417-19063215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr11:20733586-20733379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr11:26564435-26564221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
98, 38
               

               
Conread position:
               
2-232
               

               
Cow position:
               
chr11:1489491-1489265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-233
               

               
Cow position:
               
chr11:65980301-65980073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
174, 26
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr11:42311786-42311549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
152, 40
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr11:9156502-9156212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 38
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr11:17546818-17547098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
14, 39
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr11:63654682-63654398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
84, 38
               

               
Conread position:
               
2-273
               

               
Cow position:
               
chr11:3493650-3493926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
179, 15
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr11:44252451-44252736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
96, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr11:71330245-71330534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
76, 40
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr11:58135049-58135338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr11:54484755-54484558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
161, 36
               

               
Conread position:
               
5-218
               

               
Cow position:
               
chr11:31861556-31861771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
83, 35
               

               
Conread position:
               
16-205
               

               
Cow position:
               
chr11:73133953-73134146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
62, 7
               

               
Conread position:
               
17-274
               

               
Cow position:
               
chr11:44518195-44517926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
84, 23
               

               
Conread position:
               
29-274
               

               
Cow position:
               
chr11:75554306-75554059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
36-271
               

               
Cow position:
               
chr11:4034662-4034410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
43-198
               

               
Cow position:
               
chr11:46584953-46584800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
73, 128
               

               
Conread position:
               
47-219
               

               
Cow position:
               
chr11:9224851-9224675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
54-217
               

               
Cow position:
               
chr11:14728340-14728179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
58-205
               

               
Cow position:
               
chr11:30207706-30207848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
30, 98
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr12:23161986-23161703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
175, 39
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr12:23141253-23141049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr12:17979678-17979941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
165, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr12:25100131-25099847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr12:27931966-27931678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
75, 38
               

               
Conread position:
               
3-198
               

               
Cow position:
               
chr12:21209590-21209784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
178, 38
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chr12:3208899-3209106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
173, 15
               

               
Conread position:
               
5-213
               

               
Cow position:
               
chr12:19221936-19222143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
129, 36
               

               
Conread position:
               
5-274
               

               
Cow position:
               
chr12:21128087-21128352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
68, 35
               

               
Conread position:
               
8-199
               

               
Cow position:
               
chr12:32654489-32654684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
69, 32
               

               
Conread position:
               
13-274
               

               
Cow position:
               
chr12:29442370-29442630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
14-205
               

               
Cow position:
               
chr12:21428821-21429009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:31556020-31555741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
67, 39
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr13:34049460-34049754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
86, 39
               

               
Conread position:
               
2-161
               

               
Cow position:
               
chr13:34938188-34938343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
2-165
               

               
Cow position:
               
chr13:28670539-28670381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
2-193
               

               
Cow position:
               
chr13:11740159-11739972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
174, 26
               

               
Conread position:
               
2-198
               

               
Cow position:
               
chr13:32984627-32984425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chr13:50110175-50110371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr13:13325644-13325854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr13:31733166-31732964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr13:34424485-34424687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
98, 38
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr13:16254660-16254446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
88, 40
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr13:6758692-6758917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
99, 38
               

               
Conread position:
               
2-269
               

               
Cow position:
               
chr13:47229281-47228998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr13:9045492-9045770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
96, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr13:6667410-6667125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
96, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr13:14178114-14177836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
94, 19
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr13:15519783-15519514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
180, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr13:15543264-15543548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
180, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr13:21696975-21697259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr13:35757996-35758289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr13:43590055-43590337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
179, 39
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr13:32546104-32546400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
5-233
               

               
Cow position:
               
chr13:28262905-28263128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
6-274
               

               
Cow position:
               
chr13:57024425-57024700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
85, 34
               

               
Conread position:
               
40-208
               

               
Cow position:
               
chr13:42276684-42276516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
136, 43
               

               
Conread position:
               
74-268
               

               
Cow position:
               
chr13:21908305-21908094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr14:48404374-48404227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr14:38815124-38814906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
166, 22
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr14:33489003-33489221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
180, 39
               

               
Conread position:
               
2-192
               

               
Cow position:
               
chr14:44775439-44775250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
96, 38
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chr14:23257951-23258150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr14:33677661-33677868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr14:9046173-9046376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr14:44581950-44582164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
75, 39
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr14:45028393-45028192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr14:148240-148446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr14:44378396-44378611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
105, 38
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr14:2284936-2285207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr14:5074564-5074836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
214, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr14:11561432-11561143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
155, 42
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr14:17000461-17000176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
177, 39
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr14:17760282-17759998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
164, 39
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr14:22030848-22030563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr14:33393189-33392916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
99, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr14:37224789-37225073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
96, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr14:50111387-50111676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr14:37413146-37412865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
217, 15
               

               
Conread position:
               
3-223
               

               
Cow position:
               
chr14:33237624-33237838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
38, 43
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr14:13863498-13863214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
76, 37
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr14:44676715-44676953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
75, 36
               

               
Conread position:
               
4-272
               

               
Cow position:
               
chr14:13323079-13322801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
88, 38
               

               
Conread position:
               
6-204
               

               
Cow position:
               
chr14:23823734-23823540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
170, 11
               

               
Conread position:
               
40-245
               

               
Cow position:
               
chr14:45678443-45678241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
125, 42
               

               
Conread position:
               
1-100
               

               
Cow position:
               
chr15:14636166-14636269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr15:7982841-7982671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
163, 37
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr15:4672033-4672255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
74, 40
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr15:18029307-18029079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 33
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr15:2214295-2214012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
105, 39
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr15:13675102-13675333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
204, 38
               

               
Conread position:
               
2-247
               

               
Cow position:
               
chr15:5952713-5952473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
152, 38
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr15:11597407-11597127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
179, 12
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr15:499355-499628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
164, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr15:1318046-1318323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 26
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr15:7965347-7965076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
174, 32
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr15:32479992-32479715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
188, 44
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr15:18332229-18331941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
177, 38
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr15:40107642-40107914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
159, 38
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr15:4823079-4823348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
134, 37
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr15:6592017-6591733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
24, 81
               

               
Conread position:
               
4-174
               

               
Cow position:
               
chr15:4950666-4950833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
73, 36
               

               
Conread position:
               
10-274
               

               
Cow position:
               
chr15:8409484-8409757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
152, 33
               

               
Conread position:
               
11-274
               

               
Cow position:
               
chr15:4926987-4927250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
73, 29
               

               
Conread position:
               
14-276
               

               
Cow position:
               
chr15:1782847-1783122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
64, 26
               

               
Conread position:
               
16-278
               

               
Cow position:
               
chr15:13391450-13391192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 23
               

               
Conread position:
               
17-199
               

               
Cow position:
               
chr15:35647057-35646881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
17-274
               

               
Cow position:
               
chr15:7261226-7261489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
159, 23
               

               
Conread position:
               
18-241
               

               
Cow position:
               
chr15:4962250-4962472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 22
               

               
Conread position:
               
37-221
               

               
Cow position:
               
chr15:32711857-32712042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
37-271
               

               
Cow position:
               
chr15:7545498-7545725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
185, 170
               

               
Conread position:
               
39-218
               

               
Cow position:
               
chr15:17148756-17148937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
52, 18
               

               
Conread position:
               
47-274
               

               
Cow position:
               
chr15:51675361-51675600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 41
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr16:41570535-41570761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
78, 38
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr16:42185237-42184957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
177, 42
               

               
Conread position:
               
2-193
               

               
Cow position:
               
chr16:49234374-49234184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
168, 38
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr16:16270883-16270684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
174, 40
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr16:10375343-10375141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
172, 38
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr16:3088945-3088668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr16:837570-837857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr16:2482882-2482599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr16:5484988-5485271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr16:10438509-10438792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr16:23983554-23983836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr16:25171606-25171887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
60, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr16:25188905-25189188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr16:48912108-48911827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
174, 26
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr16:8815849-8815559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
96, 38
               

               
Conread position:
               
2-279
               

               
Cow position:
               
chr16:15567511-15567801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
96, 38
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr16:37480881-37480600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
217, 30
               

               
Conread position:
               
4-204
               

               
Cow position:
               
chr16:43954543-43954348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
157, 24
               

               
Conread position:
               
4-218
               

               
Cow position:
               
chr16:26105804-26105589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
73, 36
               

               
Conread position:
               
17-274
               

               
Cow position:
               
chr16:29090023-29089754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
119, 23
               

               
Conread position:
               
37-274
               

               
Cow position:
               
chr16:25738959-25739199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
157, 52
               

               
Conread position:
               
39-213
               

               
Cow position:
               
chr16:51405659-51405488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
69-268
               

               
Cow position:
               
chr16:3828947-3828739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
151, 18
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr17:16899481-16899299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
175, 40
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr17:13990522-13990319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
161, 39
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr17:2030956-2031233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
175, 39
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chr17:20099648-20099444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-200
               

               
Cow position:
               
chr17:20081041-20080846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
162, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr17:2262934-2263137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr17:9080598-9080392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr17:34156947-34157149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 39
               

               
Conread position:
               
2-248
               

               
Cow position:
               
chr17:39452950-39453194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
175, 25
               

               
Conread position:
               
2-257
               

               
Cow position:
               
chr17:3326102-3326354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
163, 26
               

               
Conread position:
               
2-270
               

               
Cow position:
               
chr17:239176-239446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 38
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr17:15436621-15436890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
160, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr17:6069383-6069662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
96, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr17:22133030-22133310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
80, 39
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr17:40805638-40805919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
3-201
               

               
Cow position:
               
chr17:20403248-20403457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 37
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr17:1657020-1656741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
154, 37
               

               
Conread position:
               
4-245
               

               
Cow position:
               
chr17:3707950-3707710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
32, 166
               

               
Conread position:
               
8-274
               

               
Cow position:
               
chr17:19020402-19020690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
17-205
               

               
Cow position:
               
chr17:24783004-24783191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
164, 23
               

               
Conread position:
               
17-205
               

               
Cow position:
               
chr17:43989343-43989531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
141, 23
               

               
Conread position:
               
33-203
               

               
Cow position:
               
chr17:42313433-42313263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
141, 46
               

               
Conread position:
               
33-204
               

               
Cow position:
               
chr17:14216171-14215999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr18:16393078-16392893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr18:17197375-17197163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 10
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr18:46867858-46867579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
145, 38
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chr18:29237942-29238131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
98, 38
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chr18:47742540-47742736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr18:29407406-29407203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr18:51342723-51342926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr18:11274068-11273798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
91, 15
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr18:23798687-23798968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr18:27988229-27988505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
76, 31
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr18:52651950-52652231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-279
               

               
Cow position:
               
chr18:54005134-54004844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
8-274
               

               
Cow position:
               
chr18:38343231-38342971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
163, 32
               

               
Conread position:
               
37-203
               

               
Cow position:
               
chr18:51461982-51461815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
37-276
               

               
Cow position:
               
chr18:16869491-16869733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
53, 75
               

               
Conread position:
               
47-204
               

               
Cow position:
               
chr18:16138011-16137853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
83, 141
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr19:48861163-48860887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
92, 39
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr19:11522124-11521848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
175, 39
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chr19:28405665-28405464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-201
               

               
Cow position:
               
chr19:50723594-50723793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
96, 38
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr19:5028027-5027758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
202, 30
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr19:5900460-5900189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
180, 38
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr19:7343109-7343390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr19:28594593-28594864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr19:32182038-32181751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
83, 38
               

               
Conread position:
               
2-279
               

               
Cow position:
               
chr19:12774157-12774442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
96, 38
               

               
Conread position:
               
3-273
               

               
Cow position:
               
chr19:35384569-35384288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 15
               

               
Conread position:
               
5-274
               

               
Cow position:
               
chr19:1656475-1656753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
215, 35
               

               
Conread position:
               
16-274
               

               
Cow position:
               
chr19:32204348-32204618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
84, 35
               

               
Conread position:
               
37-271
               

               
Cow position:
               
chr19:39373-39621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
58-274
               

               
Cow position:
               
chr19:256359-256588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
118, 16
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr2:74857704-74857903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
174, 17
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr2:43961176-43961399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
82, 39
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr2:4926934-4926651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
175, 23
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr2:72187990-72187717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
169, 39
               

               
Conread position:
               
2-131
               

               
Cow position:
               
chr2:20919664-20919535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr2:44990820-44990617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
88, 47
               

               
Conread position:
               
2-207
               

               
Cow position:
               
chr2:35356503-35356703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
159, 38
               

               
Conread position:
               
2-214
               

               
Cow position:
               
chr2:7903521-7903725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr2:12516702-12516492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
171, 38
               

               
Conread position:
               
2-267
               

               
Cow position:
               
chr2:28793734-28794007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr2:13045230-13044952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr2:4402674-4402395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
92, 38
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr2:47037938-47037670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
160, 12
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr2:54737965-54738252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
77, 38
               

               
Conread position:
               
2-272
               

               
Cow position:
               
chr2:45919073-45918789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
82, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr2:3789360-3789091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
164, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr2:5903835-5903554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
179, 40
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr2:28649115-28648835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr2:78743075-78743348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
198, 38
               

               
Conread position:
               
5-272
               

               
Cow position:
               
chr2:5484513-5484244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
173, 35
               

               
Conread position:
               
11-271
               

               
Cow position:
               
chr2:2451684-2451951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
148, 21
               

               
Conread position:
               
13-277
               

               
Cow position:
               
chr2:34474076-34473810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
163, 27
               

               
Conread position:
               
24-213
               

               
Cow position:
               
chr2:14823589-14823777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 17
               

               
Conread position:
               
29-199
               

               
Cow position:
               
chr2:44993284-44993454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
104, 96
               

               
Conread position:
               
32-268
               

               
Cow position:
               
chr2:36277880-36277632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
44-217
               

               
Cow position:
               
chr2:11693011-11693183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
132, 5
               

               
Conread position:
               
46-274
               

               
Cow position:
               
chr2:387255-387013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
44, 83
               

               
Conread position:
               
47-245
               

               
Cow position:
               
chr2:16290978-16291188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
30, 53
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr20:7083409-7083195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
175, 42
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr20:13433604-13433381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
88, 41
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr20:10839718-10839446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
174, 38
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr20:13499111-13499397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
148, 39
               

               
Conread position:
               
2-176
               

               
Cow position:
               
chr20:24615867-24615695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-203
               

               
Cow position:
               
chr20:18314348-18314145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
75, 38
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr20:10854339-10854119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
127, 38
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr20:19438917-19439197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
198, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr20:13664044-13663769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr20:28161821-28162101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
75, 38
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr20:21394929-21395208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
77, 38
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr20:5535936-5536227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
112, 38
               

               
Conread position:
               
2-284
               

               
Cow position:
               
chr20:15066479-15066765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 170
               

               
Conread position:
               
5-201
               

               
Cow position:
               
chr20:20410550-20410353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
140, 7
               

               
Conread position:
               
5-277
               

               
Cow position:
               
chr20:8216518-8216801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
83, 35
               

               
Conread position:
               
32-268
               

               
Cow position:
               
chr20:13768821-13769065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
144, 88
               

               
Conread position:
               
41-274
               

               
Cow position:
               
chr20:8366886-8366645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 38
               

               
Conread position:
               
69-274
               

               
Cow position:
               
chr20:9521066-9520852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr21:34001561-34001355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
130, 24
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr21:37149150-37149433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
85, 39
               

               
Conread position:
               
2-203
               

               
Cow position:
               
chr21:47942063-47942261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
176, 38
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr21:30193-30397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
174, 38
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr21:2882622-2882346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
96, 38
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr21:5840148-5839868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr21:37372353-37372633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr21:3779883-3780168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
177, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr21:33253296-33253580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr21:28985233-28985506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
181, 38
               

               
Conread position:
               
3-151
               

               
Cow position:
               
chr21:4096304-4096447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr21:18817434-18817230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
81, 36
               

               
Conread position:
               
13-267
               

               
Cow position:
               
chr21:9866128-9865869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
14-274
               

               
Cow position:
               
chr21:11452418-11452154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
152, 26
               

               
Conread position:
               
27-274
               

               
Cow position:
               
chr21:7063653-7063900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
135, 13
               

               
Conread position:
               
47-205
               

               
Cow position:
               
chr21:35774102-35774261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
49, 42
               

               
Conread position:
               
49-253
               

               
Cow position:
               
chr21:218189-218390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
116, 67
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr22:41240317-41240464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr22:36590342-36590158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
105, 39
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr22:37268102-37268309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
17, 40
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr22:36579643-36579440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr22:3217201-3216935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
156, 39
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr22:13673868-13673582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
103, 41
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr22:290760-290475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
164, 39
               

               
Conread position:
               
2-198
               

               
Cow position:
               
chr22:35913219-35913030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chr22:1281788-1281587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
75, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr22:538044-538250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 40
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr22:5232348-5232145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
155, 38
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr22:3277415-3277135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
179, 15
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr22:18028225-18028510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
85, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr22:36184702-36184987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr22:6502202-6501906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
2-280
               

               
Cow position:
               
chr22:10908893-10908606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
77, 38
               

               
Conread position:
               
3-198
               

               
Cow position:
               
chr22:11032691-11032886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
74, 37
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr22:44477570-44477766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
162, 22
               

               
Conread position:
               
4-204
               

               
Cow position:
               
chr22:41418369-41418179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
172, 28
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr22:38176043-38176235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
127, 9
               

               
Conread position:
               
8-276
               

               
Cow position:
               
chr22:15053666-15053940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
75, 32
               

               
Conread position:
               
10-218
               

               
Cow position:
               
chr22:2395047-2394831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
34-198
               

               
Cow position:
               
chr22:8121110-8120942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
34-274
               

               
Cow position:
               
chr22:19536527-19536778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
186, 137
               

               
Conread position:
               
37-205
               

               
Cow position:
               
chr22:30677707-30677542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
144, 102
               

               
Conread position:
               
44-218
               

               
Cow position:
               
chr22:45510555-45510383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
86, 45
               

               
Conread position:
               
47-218
               

               
Cow position:
               
chr22:1268771-1268602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
100, 23
               

               
Conread position:
               
51-274
               

               
Cow position:
               
chr22:45581916-45582143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
109, 77
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr23:19451054-19451204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
129, 41
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr23:11077266-11077080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr23:6220188-6220438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
89, 39
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr23:15876626-15876340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
175, 31
               

               
Conread position:
               
2-160
               

               
Cow position:
               
chr23:31649099-31648942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
75, 38
               

               
Conread position:
               
2-198
               

               
Cow position:
               
chr23:5873635-5873439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
74, 15
               

               
Conread position:
               
2-202
               

               
Cow position:
               
chr23:19949656-19949450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
93, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr23:29402777-29402576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr23:13512054-13512330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
96, 38
               

               
Conread position:
               
2-272
               

               
Cow position:
               
chr23:7369469-7369749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
193, 36
               

               
Conread position:
               
2-273
               

               
Cow position:
               
chr23:5739412-5739132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
173, 9
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr23:14964103-14963828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
179, 40
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr23:38581670-38581940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 39
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr23:2576368-2576643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
6-274
               

               
Cow position:
               
chr23:25682993-25682729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
92, 22
               

               
Conread position:
               
44-277
               

               
Cow position:
               
chr23:30237251-30237498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
121, 5
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr24:36558744-36558543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
191, 39
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr24:14871286-14871009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
199, 39
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr24:6024078-6023876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
179, 41
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr24:17321733-17321943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
81, 38
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr24:5992198-5991983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-248
               

               
Cow position:
               
chr24:12109676-12109430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr24:4414503-4414225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
96, 38
               

               
Conread position:
               
2-272
               

               
Cow position:
               
chr24:6668777-6668508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
197, 29
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr24:6353186-6353454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
218, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr24:19834424-19834708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr24:29188320-29188604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr24:35841040-35840751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
99, 38
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr24:17370936-17370657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
76, 35
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chr24:31006399-31006197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
78, 25
               

               
Conread position:
               
14-204
               

               
Cow position:
               
chr24:6435523-6435711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 17
               

               
Conread position:
               
14-274
               

               
Cow position:
               
chr24:35869514-35869249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
63, 26
               

               
Conread position:
               
17-218
               

               
Cow position:
               
chr24:17409522-17409722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
66, 24
               

               
Conread position:
               
37-274
               

               
Cow position:
               
chr24:8151214-8150976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 11
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr25:33259408-33259618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
175, 30
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr25:30266489-30266767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
101, 40
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr25:17588566-17588365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 40
               

               
Conread position:
               
2-257
               

               
Cow position:
               
chr25:36636695-36636425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 171
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr25:12941682-12941401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr25:11931787-11931509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
171, 39
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr25:18251905-18251642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
4-199
               

               
Cow position:
               
chr25:13454589-13454394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
88, 36
               

               
Conread position:
               
6-198
               

               
Cow position:
               
chr25:24216466-24216276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
143, 35
               

               
Conread position:
               
8-274
               

               
Cow position:
               
chr25:18450321-18450585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
153, 34
               

               
Conread position:
               
37-274
               

               
Cow position:
               
chr25:34506666-34506415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
39-276
               

               
Cow position:
               
chr25:3377205-3376963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
98, 50
               

               
Conread position:
               
54-199
               

               
Cow position:
               
chr25:17655479-17655626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr26:2199634-2199842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chr26:1626988-1627197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
7-242
               

               
Cow position:
               
chr26:35399114-35398880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
137, 21
               

               
Conread position:
               
14-283
               

               
Cow position:
               
chr26:5676127-5676409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
167, 26
               

               
Conread position:
               
16-274
               

               
Cow position:
               
chr26:19350498-19350229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
35-209
               

               
Cow position:
               
chr26:35100610-35100793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
95, 59
               

               
Conread position:
               
47-274
               

               
Cow position:
               
chr26:21825640-21825394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
2-232
               

               
Cow position:
               
chr27:17319555-17319326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
143, 71
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr27:8568157-8568389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr27:9330677-9330960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr27:9992255-9991971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
4-274
               

               
Cow position:
               
chr27:25057865-25058143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
154, 36
               

               
Conread position:
               
6-218
               

               
Cow position:
               
chr27:21286944-21286732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 34
               

               
Conread position:
               
40-245
               

               
Cow position:
               
chr27:11486294-11486496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
125, 169
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr28:33247081-33246886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
95, 10
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr28:5803028-5803271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
164, 39
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chr28:2988093-2987898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
174, 38
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chr28:7788903-7788712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr28:24668602-24668801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
172, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr28:1954344-1954546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr28:18146739-18146544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
172, 37
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr28:29760940-29760724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
75, 42
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr28:9179617-9179881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
160, 12
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr28:22042285-22042019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
160, 38
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr28:24883985-24883714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr28:1505857-1506141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
96, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr28:5750717-5750433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr28:7741438-7741716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
179, 30
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr28:8380052-8380338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr28:15587076-15587362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
40, 118
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr28:17666316-17666032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr28:22260161-22259877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr28:29820986-29821270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr28:5938475-5938763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
90, 38
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr28:15684232-15684496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
73, 35
               

               
Conread position:
               
11-145
               

               
Cow position:
               
chr28:11025894-11025761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
119, 29
               

               
Conread position:
               
14-271
               

               
Cow position:
               
chr28:24589856-24590128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
65, 26
               

               
Conread position:
               
29-205
               

               
Cow position:
               
chr28:523307-523481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
105, 60
               

               
Conread position:
               
47-235
               

               
Cow position:
               
chr28:5799331-5799517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
44, 35
               

               
Conread position:
               
48-278
               

               
Cow position:
               
chr28:28750034-28750260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
126, 159
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr29:8061172-8060987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
100, 39
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr29:38237571-38237366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
87, 39
               

               
Conread position:
               
2-179
               

               
Cow position:
               
chr29:21426073-21425895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
74, 38
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chr29:13583035-13583230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr29:14085173-14084973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
96, 29
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr29:9642806-9642564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
93, 39
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr29:9620373-9620652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
96, 39
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr29:10647294-10647010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr29:26163874-26163597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
179, 35
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr29:32541049-32541334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr29:38227933-38228217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr29:39078750-39078468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
178, 38
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr29:251705-251988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
157, 12
               

               
Conread position:
               
17-199
               

               
Cow position:
               
chr29:21264908-21265082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
37-274
               

               
Cow position:
               
chr29:32891774-32892029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr3:79431836-79431626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
174, 39
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr3:49271244-49271028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 40
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr3:32612566-32612357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
135, 40
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr3:37625866-37626080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
180, 39
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr3:64822975-64823251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
219, 31
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr3:46346956-46346681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
97, 40
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr3:648642-648380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
129, 17
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr3:52653777-52653490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 31
               

               
Conread position:
               
2-165
               

               
Cow position:
               
chr3:20381413-20381574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
2-198
               

               
Cow position:
               
chr3:46016916-46017108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
102, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr3:47080542-47080342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
179, 37
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr3:40342991-40343207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
89, 41
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr3:64356924-64356717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
2-231
               

               
Cow position:
               
chr3:63002673-63002445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 39
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr3:64027256-64026991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
159, 38
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr3:18860283-18860564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr3:19800306-19800025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr3:37969912-37970193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr3:54771733-54772002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
164, 39
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr3:74058408-74058678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr3:19756078-19755782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
79, 39
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr3:21181830-21181544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
173, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr3:49136690-49136419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
168, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr3:70888010-70888290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
81, 38
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chr3:48229610-48229410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr3:42052286-42052017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
157, 23
               

               
Conread position:
               
10-274
               

               
Cow position:
               
chr3:63200487-63200761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
120, 29
               

               
Conread position:
               
17-204
               

               
Cow position:
               
chr3:55892296-55892484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
145, 24
               

               
Conread position:
               
32-277
               

               
Cow position:
               
chr3:37953099-37952843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
55, 86
               

               
Conread position:
               
37-270
               

               
Cow position:
               
chr3:19879557-19879792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
125, 183
               

               
Conread position:
               
52-213
               

               
Cow position:
               
chr3:78909247-78909085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
124, 47
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr4:44647452-44647244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
133, 22
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr4:22474025-22474244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
173, 39
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr4:493930-493644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr4:967404-967118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 39
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr4:6206270-6206564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
71, 39
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr4:20604400-20604688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
80, 39
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr4:4177946-4178217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
89, 39
               

               
Conread position:
               
2-203
               

               
Cow position:
               
chr4:159835-160037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr4:1929966-1929764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr4:16057355-16057557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr4:17093189-17092988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr4:27334390-27334592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr4:45527518-45527718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
174, 38
               

               
Conread position:
               
2-206
               

               
Cow position:
               
chr4:33072143-33071940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
131, 38
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr4:27294642-27294434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
163, 38
               

               
Conread position:
               
2-273
               

               
Cow position:
               
chr4:5444159-5443874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr4:1049587-1049301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr4:36897050-36897333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
96, 38
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr4:6489686-6489399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
199, 38
               

               
Conread position:
               
3-225
               

               
Cow position:
               
chr4:39270724-39270501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
151, 37
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr4:50975312-50975582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
88, 36
               

               
Conread position:
               
4-274
               

               
Cow position:
               
chr4:45106137-45106419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
97, 36
               

               
Conread position:
               
4-274
               

               
Cow position:
               
chr4:45298406-45298142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
74, 36
               

               
Conread position:
               
5-277
               

               
Cow position:
               
chr4:38930084-38930368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
121, 23
               

               
Conread position:
               
14-205
               

               
Cow position:
               
chr4:530088-530281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
64, 26
               

               
Conread position:
               
17-205
               

               
Cow position:
               
chr4:3126488-3126681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 23
               

               
Conread position:
               
37-274
               

               
Cow position:
               
chr4:14776162-14776409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
40, 58
               

               
Conread position:
               
46-205
               

               
Cow position:
               
chr4:20181757-20181918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr5:24107909-24107709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
175, 39
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr5:23669358-23669119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
99, 39
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr5:18400918-18400640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 39
               

               
Conread position:
               
2-128
               

               
Cow position:
               
chr5:32308621-32308497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr5:45701085-45701288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr5:10775498-10775294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr5:12731938-12731735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr5:40788838-40789048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 38
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr5:58196788-58197003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-229
               

               
Cow position:
               
chr5:69622383-69622608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
94, 26
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr5:47830299-47830024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
183, 38
               

               
Conread position:
               
2-273
               

               
Cow position:
               
chr5:24999213-24998934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
175, 41
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr5:3786692-3786983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr5:18885754-18885477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
207, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr5:27654588-27654868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
96, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr5:28950090-28949825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
218, 39
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr5:34697376-34697658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
91, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr5:41956598-41956313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr5:46629407-46629122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr5:48807966-48807682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr5:55628764-55629048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr5:59283089-59283373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
179, 39
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr5:14344645-14344374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
165, 29
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr5:24099439-24099725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
177, 38
               

               
Conread position:
               
4-277
               

               
Cow position:
               
chr5:28333666-28333401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
172, 37
               

               
Conread position:
               
14-205
               

               
Cow position:
               
chr5:18121698-18121508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
167, 26
               

               
Conread position:
               
14-221
               

               
Cow position:
               
chr5:46005072-46004865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
64, 26
               

               
Conread position:
               
14-241
               

               
Cow position:
               
chr5:53625138-53624913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
162, 27
               

               
Conread position:
               
14-284
               

               
Cow position:
               
chr5:46737791-46737509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
167, 27
               

               
Conread position:
               
37-203
               

               
Cow position:
               
chr5:48831958-48832125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
59, 42
               

               
Conread position:
               
38-205
               

               
Cow position:
               
chr5:5104028-5104197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
40-193
               

               
Cow position:
               
chr5:48137531-48137379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
120, 54
               

               
Conread position:
               
48-205
               

               
Cow position:
               
chr5:48855032-48855192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
66-274
               

               
Cow position:
               
chr5:58548846-58549052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
68-204
               

               
Cow position:
               
chr5:32282130-32281991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
1-131
               

               
Cow position:
               
chr6:56042807-56042678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr6:17244488-17244285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr6:7834427-7834713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
61, 33
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr6:18973496-18973220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 44
               

               
Conread position:
               
2-197
               

               
Cow position:
               
chr6:6567503-6567693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-202
               

               
Cow position:
               
chr6:13310447-13310245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 38
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr6:17597398-17597193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 39
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr6:12665406-12665203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
145, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr6:13104971-13105175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr6:28169817-28170016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
149, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr6:40866411-40866209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr6:43999974-44000176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr6:44149643-44149442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-246
               

               
Cow position:
               
chr6:38271802-38272050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
193, 38
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr6:10632469-10632737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
163, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr6:8203096-8203374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr6:20560189-20559906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
179, 40
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr6:58601393-58601679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-279
               

               
Cow position:
               
chr6:3276461-3276170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
3-158
               

               
Cow position:
               
chr6:31565244-31565090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
139, 37
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr6:11871732-11871531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
178, 37
               

               
Conread position:
               
3-268
               

               
Cow position:
               
chr6:31636500-31636229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
87, 37
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr6:60931601-60931886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
102, 35
               

               
Conread position:
               
14-274
               

               
Cow position:
               
chr6:68027852-68028112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
148, 26
               

               
Conread position:
               
18-205
               

               
Cow position:
               
chr6:330534-330350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
35-218
               

               
Cow position:
               
chr6:44550218-44550035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
126, 48
               

               
Conread position:
               
37-203
               

               
Cow position:
               
chr6:26669916-26669750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
144, 45
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr7:1403456-1403243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
183, 39
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr7:40268966-40268691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr7:19046731-19046452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
135, 47
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr7:20212064-20211781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
172, 110
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr7:20532964-20533237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
175, 39
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr7:63386731-63387022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
78, 39
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr7:25135865-25136152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
68, 31
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chr7:20798438-20798242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 9
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chr7:39097503-39097306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
163, 38
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr7:34150308-34150511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
74, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr7:5261920-5261718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
179, 16
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr7:11447563-11447770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr7:27101291-27101084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
78, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr7:29471463-29471670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
163, 38
               

               
Conread position:
               
2-232
               

               
Cow position:
               
chr7:33332564-33332794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
174, 38
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr7:42871145-42871384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
75, 38
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr7:525980-526253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
98, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr7:5309109-5308826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr7:21986430-21986705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr7:29369021-29368737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
75, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr7:34486920-34487202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr7:38397819-38398104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
163, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr7:39792774-39793057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
199, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr7:66905724-66906010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr7:3156473-3156759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
131, 38
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr7:23837575-23837866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
126, 39
               

               
Conread position:
               
3-187
               

               
Cow position:
               
chr7:63555947-63556130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
159, 37
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr7:57564094-57563878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
82, 31
               

               
Conread position:
               
3-261
               

               
Cow position:
               
chr7:59466957-59466696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
153, 37
               

               
Conread position:
               
4-218
               

               
Cow position:
               
chr7:68333950-68334162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
158, 36
               

               
Conread position:
               
32-213
               

               
Cow position:
               
chr7:59679879-59680068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
46, 101
               

               
Conread position:
               
33-274
               

               
Cow position:
               
chr7:67813539-67813790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
138, 115
               

               
Conread position:
               
37-205
               

               
Cow position:
               
chr7:48805700-48805527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
37-282
               

               
Cow position:
               
chr7:24058490-24058744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
125, 35
               

               
Conread position:
               
51-268
               

               
Cow position:
               
chr7:59940248-59940486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
56-218
               

               
Cow position:
               
chr7:59138703-59138863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
106, 33
               

               
Conread position:
               
57-278
               

               
Cow position:
               
chr7:57211220-57211443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
21, 151
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr8:21584421-21584619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
166, 39
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr8:35590870-35591071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr8:32647560-32647767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 15
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr8:9964289-9964067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 110
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr8:25417666-25417450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
88, 39
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr8:38577207-38576947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr8:38585152-38584890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
160, 39
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr8:46218544-46218275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
141, 42
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr8:19189851-19190141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 10
               

               
Conread position:
               
2-169
               

               
Cow position:
               
chr8:45450497-45450659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
2-198
               

               
Cow position:
               
chr8:45449969-45450158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
162, 38
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chr8:28877912-28877713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
75, 39
               

               
Conread position:
               
2-202
               

               
Cow position:
               
chr8:8315269-8315068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-267
               

               
Cow position:
               
chr8:32630836-32630568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr8:29007831-29008106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr8:10749555-10749830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr8:19330904-19331185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr8:25523594-25523871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
179, 12
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr8:12801605-12801881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
76, 36
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr8:32318360-32318077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr8:33589567-33589853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
76, 40
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr8:47661128-47660845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr8:42419247-42418953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
49, 203
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr8:54017355-54017074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
179, 26
               

               
Conread position:
               
18-204
               

               
Cow position:
               
chr8:42158779-42158595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
116, 22
               

               
Conread position:
               
18-241
               

               
Cow position:
               
chr8:49859561-49859337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
55, 23
               

               
Conread position:
               
19-218
               

               
Cow position:
               
chr8:11775830-11776026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
155, 23
               

               
Conread position:
               
37-218
               

               
Cow position:
               
chr8:25437539-25437730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
40-277
               

               
Cow position:
               
chr8:31255867-31256119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 30
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr9:9646963-9647169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
172, 39
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr9:30488435-30488651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
179, 39
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr9:28655191-28655427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
42, 108
               

               
Conread position:
               
2-175
               

               
Cow position:
               
chr9:34722750-34722915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr9:17063546-17063338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr9:5141561-5141769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
2-270
               

               
Cow position:
               
chr9:28678813-28679094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr9:9013937-9014210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr9:30435414-30435697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
172, 54
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr9:31808419-31808703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr9:59536939-59537221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
14, 39
               

               
Conread position:
               
2-279
               

               
Cow position:
               
chr9:37970353-37970077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
96, 38
               

               
Conread position:
               
4-274
               

               
Cow position:
               
chr9:25633167-25632892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
145, 38
               

               
Conread position:
               
4-274
               

               
Cow position:
               
chr9:50729291-50729012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
178, 17
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr9:3763847-3764127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
205, 35
               

               
Conread position:
               
7-274
               

               
Cow position:
               
chr9:2476606-2476864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
169, 35
               

               
Conread position:
               
14-205
               

               
Cow position:
               
chr9:1075360-1075171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 26
               

               
Conread position:
               
15-278
               

               
Cow position:
               
chr9:3963273-3962999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
122, 25
               

               
Conread position:
               
16-169
               

               
Cow position:
               
chr9:2888281-2888134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
31-145
               

               
Cow position:
               
chr9:54393125-54393011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
39-213
               

               
Cow position:
               
chr9:7092090-7092260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
145, 50
               

               
Conread position:
               
41-201
               

               
Cow position:
               
chr9:59481917-59481756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chrX:18553177-18553378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
173, 40
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chrX:24476449-24476243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
101, 42
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chrX:21732015-21731810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
163, 27
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chrX:8574730-8574527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
129, 39
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chrX:29778761-29778543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
175, 39
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chrX:4797072-4797314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
180, 39
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chrX:2011949-2011672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
175, 39
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chrX:10416710-10416420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
107, 39
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chrX:26426818-26426550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
174, 10
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chrX:26999335-26999612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
95, 10
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chrX:23213600-23213295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
165, 40
               

               
Conread position:
               
2-201
               

               
Cow position:
               
chrX:6282010-6281808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
90, 39
               

               
Conread position:
               
2-201
               

               
Cow position:
               
chrX:38890742-38890939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
132, 38
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chrX:13053755-13053956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 39
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chrX:6872324-6872120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chrX:8588913-8589112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chrX:11148586-11148385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chrX:12343684-12343886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chrX:15623749-15623550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chrX:18659039-18658841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chrX:29910676-29910479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
182, 38
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chrX:32066416-32066217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chrX:28650805-28650595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chrX:5304902-5305122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
89, 76
               

               
Conread position:
               
2-223
               

               
Cow position:
               
chrX:674456-674234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chrX:37812911-37813178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chrX:2577170-2577455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
79, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chrX:971524-971812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chrX:12315007-12314719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chrX:13416685-13416400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
128, 37
               

               
Conread position:
               
2-279
               

               
Cow position:
               
chrX:22618549-22618273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
160, 38
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chrX:25612807-25613006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
171, 21
               

               
Conread position:
               
3-218
               

               
Cow position:
               
chrX:20798071-20798284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 48
               

               
Conread position:
               
4-169
               

               
Cow position:
               
chrX:33707185-33707348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
4-274
               

               
Cow position:
               
chrX:41102715-41102434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
171, 26
               

               
Conread position:
               
5-274
               

               
Cow position:
               
chrX:23020081-23020341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
176, 35
               

               
Conread position:
               
8-199
               

               
Cow position:
               
chrX:27006250-27006438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
166, 10
               

               
Conread position:
               
14-274
               

               
Cow position:
               
chrX:35940489-35940230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 26
               

               
Conread position:
               
14-279
               

               
Cow position:
               
chrX:3467875-3467609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
64, 26
               

               
Conread position:
               
17-268
               

               
Cow position:
               
chrX:35530627-35530879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
61, 23
               

               
Conread position:
               
37-205
               

               
Cow position:
               
chrX:1834601-1834768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
145, 40
               

               
Conread position:
               
37-218
               

               
Cow position:
               
chrX:13182344-13182163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
46-274
               

               
Cow position:
               
chrX:28868448-28868213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
118, 42
               

               
Conread position:
               
55-245
               

               
Cow position:
               
chrX:6249678-6249488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
111, 166