Cow genome map
| Conread name: | Ova1-OVRM10223G06 |
| Conread position: | 2-219 |
| Cow position: | chr1:86510367-86510577 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 36, 77 |
| Conread position: | 5-231 |
| Cow position: | chr1:7636071-7636298 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 33, 135 |
| Conread position: | 6-145 |
| Cow position: | chr1:86002572-86002432 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 32, 75 |
| Conread position: | 6-224 |
| Cow position: | chr1:70312051-70312270 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 32, 78 |
| Conread position: | 17-197 |
| Cow position: | chr1:64761586-64761403 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 23, 71 |
| Conread position: | 18-225 |
| Cow position: | chr1:49605856-49606065 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 19, 133 |
| Conread position: | 23-225 |
| Cow position: | chr1:66504515-66504725 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 17, 148 |
| Conread position: | 45-225 |
| Cow position: | chr1:42771964-42771784 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 81, 73 |
| Conread position: | 46-243 |
| Cow position: | chr1:40067746-40067550 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 80, 30 |
| Conread position: | 285-554 |
| Cow position: | chr1:57928758-57928504 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 50, 67 |
| Conread position: | 296-650 |
| Cow position: | chr1:21133971-21133603 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 91, 77 |
| Conread position: | 393-664 |
| Cow position: | chr1:86001651-86001387 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 58 |
| Conread position: | 2-205 |
| Cow position: | chr10:10686112-10686315 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 10 |
| Conread position: | 2-225 |
| Cow position: | chr10:8365936-8365712 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 39, 63 |
| Conread position: | 5-207 |
| Cow position: | chr10:4321995-4321791 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 16, 83 |
| Conread position: | 6-217 |
| Cow position: | chr10:39077284-39077498 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 32, 63 |
| Conread position: | 6-240 |
| Cow position: | chr10:3895983-3895730 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 7-207 |
| Cow position: | chr10:11113288-11113087 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 170 |
| Conread position: | 13-201 |
| Cow position: | chr10:6788312-6788497 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 69 |
| Conread position: | 18-225 |
| Cow position: | chr10:19235454-19235245 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 147 |
| Conread position: | 20-224 |
| Cow position: | chr10:10531902-10531694 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 18, 45 |
| Conread position: | 24-225 |
| Cow position: | chr10:26617368-26617578 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 287-643 |
| Cow position: | chr10:63076024-63075649 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 85, 41 |
| Conread position: | 481-663 |
| Cow position: | chr10:37519580-37519390 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 50, 26 |
| Conread position: | 2-214 |
| Cow position: | chr11:84740505-84740721 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 36, 138 |
| Conread position: | 2-221 |
| Cow position: | chr11:15652564-15652787 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 2-252 |
| Cow position: | chr11:8819652-8819904 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 35, 194 |
| Conread position: | 7-234 |
| Cow position: | chr11:35332385-35332151 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 18-225 |
| Cow position: | chr11:1403426-1403214 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 7, 67 |
| Conread position: | 21-225 |
| Cow position: | chr11:81317842-81317630 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 22-216 |
| Cow position: | chr11:4193089-4193285 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 21, 113 |
| Conread position: | 26-221 |
| Cow position: | chr11:5894291-5894485 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 26 |
| Conread position: | 299-654 |
| Cow position: | chr11:49037595-49037216 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 80, 62 |
| Conread position: | 25-221 |
| Cow position: | chr12:41464054-41463852 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 145 |
| Conread position: | 5-225 |
| Cow position: | chr13:50460399-50460171 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 166 |
| Conread position: | 12-221 |
| Cow position: | chr13:11314598-11314808 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 7, 71 |
| Conread position: | 2-254 |
| Cow position: | chr14:33282154-33281889 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 36, 80 |
| Conread position: | 5-207 |
| Cow position: | chr14:18977231-18977434 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 33, 84 |
| Conread position: | 5-297 |
| Cow position: | chr14:11351910-11352203 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 33, 44 |
| Conread position: | 35-208 |
| Cow position: | chr14:19794338-19794167 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 91, 107 |
| Conread position: | 46-219 |
| Cow position: | chr14:37181570-37181398 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 329-558 |
| Cow position: | chr14:34606986-34606758 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 58, 42 |
| Conread position: | 472-651 |
| Cow position: | chr14:194687-194869 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 64, 29 |
| Conread position: | 2-230 |
| Cow position: | chr15:38678435-38678666 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 36, 135 |
| Conread position: | 18-472 |
| Cow position: | chr15:30437074-30437535 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 298 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 20, 71 |
| Conread position: | 21-224 |
| Cow position: | chr15:22433817-22434033 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 54, 96 |
| Conread position: | 35-207 |
| Cow position: | chr15:5039811-5039981 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 86, 17 |
| Conread position: | 2-231 |
| Cow position: | chr16:8804378-8804610 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 36, 139 |
| Conread position: | 6-205 |
| Cow position: | chr16:12714342-12714142 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 29, 72 |
| Conread position: | 7-226 |
| Cow position: | chr16:29739021-29738798 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 6, 61 |
| Conread position: | 35-293 |
| Cow position: | chr16:32604219-32604489 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 135 |
| Conread position: | 299-650 |
| Cow position: | chr16:46451492-46451128 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 74, 5 |
| Conread position: | 294-447 |
| Cow position: | chr17:597871-597718 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 93, 79 |
| Conread position: | 294-651 |
| Cow position: | chr17:20695165-20695532 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 93, 79 |
| Conread position: | 2-217 |
| Cow position: | chr18:33138237-33138024 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 39, 163 |
| Conread position: | 20-213 |
| Cow position: | chr18:26740157-26739965 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 124 |
| Conread position: | 36-647 |
| Cow position: | chr18:37560892-37561555 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 426 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 90, 106 |
| Conread position: | 51-221 |
| Cow position: | chr18:36343044-36343216 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 33, 26 |
| Conread position: | 335-654 |
| Cow position: | chr18:16151744-16152063 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 52, 27 |
| Conread position: | 2-206 |
| Cow position: | chr19:47099702-47099909 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 33, 63 |
| Conread position: | 6-207 |
| Cow position: | chr19:50573790-50573989 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 21, 72 |
| Conread position: | 12-218 |
| Cow position: | chr19:12701633-12701841 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 26, 73 |
| Conread position: | 12-219 |
| Cow position: | chr19:45145360-45145570 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 22, 108 |
| Conread position: | 22-225 |
| Cow position: | chr19:16109468-16109673 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 16, 61 |
| Conread position: | 2-224 |
| Cow position: | chr2:14324649-14324427 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 150 |
| Conread position: | 2-226 |
| Cow position: | chr2:43106596-43106825 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 36, 55 |
| Conread position: | 18-225 |
| Cow position: | chr2:5724059-5723855 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 63 |
| Conread position: | 293-639 |
| Cow position: | chr2:29757740-29757383 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 147, 35 |
| Conread position: | 294-645 |
| Cow position: | chr2:80439396-80439753 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 85, 76 |
| Conread position: | 298-472 |
| Cow position: | chr2:43868470-43868638 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 89, 80 |
| Conread position: | 2-224 |
| Cow position: | chr20:5936221-5935997 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 36, 81 |
| Conread position: | 14-253 |
| Cow position: | chr20:2828355-2828601 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 193 |
| Conread position: | 18-224 |
| Cow position: | chr20:23794126-23794330 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 71 |
| Conread position: | 35-219 |
| Cow position: | chr20:3134518-3134705 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 38, 177 |
| Conread position: | 291-600 |
| Cow position: | chr20:5549529-5549831 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 80, 8 |
| Conread position: | 2-207 |
| Cow position: | chr21:14984912-14984704 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 30, 166 |
| Conread position: | 2-221 |
| Cow position: | chr21:4864452-4864228 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 37, 149 |
| Conread position: | 20-207 |
| Cow position: | chr21:40082452-40082638 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 18 |
| Conread position: | 20-225 |
| Cow position: | chr21:47178271-47178477 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 20, 130 |
| Conread position: | 2-218 |
| Cow position: | chr22:13653272-13653496 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 2-225 |
| Cow position: | chr22:11348211-11348438 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 36, 104 |
| Conread position: | 7-225 |
| Cow position: | chr22:27272700-27272477 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 6, 82 |
| Conread position: | 18-233 |
| Cow position: | chr22:31131744-31131964 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 6, 71 |
| Conread position: | 299-472 |
| Cow position: | chr22:7231018-7231187 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 77 |
| Conread position: | 2-221 |
| Cow position: | chr23:31612693-31612918 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 11, 113 |
| Conread position: | 3-232 |
| Cow position: | chr23:3146648-3146878 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 35, 147 |
| Conread position: | 18-225 |
| Cow position: | chr23:36720834-36720618 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 22, 138 |
| Conread position: | 299-623 |
| Cow position: | chr23:9607984-9608325 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 7-248 |
| Cow position: | chr24:27959890-27959650 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 31, 137 |
| Conread position: | 21-225 |
| Cow position: | chr24:25059843-25059637 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 17, 130 |
| Conread position: | 36-207 |
| Cow position: | chr24:27320667-27320838 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 40, 46 |
| Conread position: | 2-206 |
| Cow position: | chr25:38634866-38635071 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 36, 18 |
| Conread position: | 12-207 |
| Cow position: | chr25:15283749-15283953 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 67 |
| Conread position: | 299-661 |
| Cow position: | chr25:2222943-2222582 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 71, 85 |
| Conread position: | 349-647 |
| Cow position: | chr25:24459771-24459459 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 32, 40 |
| Conread position: | 3-164 |
| Cow position: | chr26:9166613-9166448 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 6-225 |
| Cow position: | chr26:16722415-16722637 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 24, 161 |
| Conread position: | 213-563 |
| Cow position: | chr26:9508641-9508992 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 10, 38 |
| Conread position: | 4-225 |
| Cow position: | chr27:26621535-26621308 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 21-369 |
| Cow position: | chr27:12172302-12172663 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 17, 88 |
| Conread position: | 2-196 |
| Cow position: | chr28:27240880-27240688 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 23, 112 |
| Conread position: | 19-237 |
| Cow position: | chr28:18587308-18587086 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 17, 90 |
| Conread position: | 274-650 |
| Cow position: | chr28:24318889-24318510 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 83, 98 |
| Conread position: | 294-472 |
| Cow position: | chr28:23916204-23916378 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 93, 79 |
| Conread position: | 2-264 |
| Cow position: | chr29:44599816-44599550 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 35, 149 |
| Conread position: | 18-212 |
| Cow position: | chr29:33142199-33142397 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 22, 169 |
| Conread position: | 51-254 |
| Cow position: | chr29:43552990-43552787 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 75, 120 |
| Conread position: | 83-619 |
| Cow position: | chr29:34333516-34332949 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 360 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 43, 78 |
| Conread position: | 2-209 |
| Cow position: | chr3:19768079-19768289 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 36, 23 |
| Conread position: | 2-221 |
| Cow position: | chr3:14265873-14265650 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 36, 130 |
| Conread position: | 2-225 |
| Cow position: | chr3:50345788-50345560 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 66 |
| Conread position: | 2-225 |
| Cow position: | chr3:73637924-73638157 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 5-221 |
| Cow position: | chr3:40742091-40741872 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 164 |
| Conread position: | 5-225 |
| Cow position: | chr3:3664641-3664863 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 33, 83 |
| Conread position: | 5-225 |
| Cow position: | chr3:61555032-61554808 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 33, 64 |
| Conread position: | 5-409 |
| Cow position: | chr3:38002754-38003154 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 275 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 33, 233 |
| Conread position: | 18-205 |
| Cow position: | chr3:21095634-21095446 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 22, 8 |
| Conread position: | 25-221 |
| Cow position: | chr3:8452902-8452701 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 15, 63 |
| Conread position: | 36-221 |
| Cow position: | chr3:36000218-36000410 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 287-472 |
| Cow position: | chr3:44504541-44504359 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 100, 88 |
| Conread position: | 294-538 |
| Cow position: | chr3:67450865-67451112 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 93, 34 |
| Conread position: | 5-206 |
| Cow position: | chr4:23049422-23049222 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 138 |
| Conread position: | 18-206 |
| Cow position: | chr4:27906704-27906894 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 23, 69 |
| Conread position: | 18-224 |
| Cow position: | chr4:44067442-44067236 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 148 |
| Conread position: | 25-222 |
| Cow position: | chr4:37948432-37948229 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 51-225 |
| Cow position: | chr4:1983419-1983595 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 294-664 |
| Cow position: | chr4:49031530-49031915 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 93, 77 |
| Conread position: | 2-293 |
| Cow position: | chr5:20531569-20531291 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 34, 111 |
| Conread position: | 5-225 |
| Cow position: | chr5:21118361-21118586 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 32, 146 |
| Conread position: | 13-219 |
| Cow position: | chr5:56961124-56961335 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 25, 155 |
| Conread position: | 20-226 |
| Cow position: | chr5:34928667-34928458 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 31 |
| Conread position: | 2-227 |
| Cow position: | chr6:32488234-32488001 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 176 |
| Conread position: | 5-242 |
| Cow position: | chr7:48146151-48146389 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 119, 140 |
| Conread position: | 27-232 |
| Cow position: | chr7:61338902-61339107 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 13, 46 |
| Conread position: | 295-447 |
| Cow position: | chr7:6207738-6207890 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 92, 68 |
| Conread position: | 2-202 |
| Cow position: | chr8:46583558-46583751 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 76 |
| Conread position: | 2-221 |
| Cow position: | chr8:37267493-37267714 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 36, 81 |
| Conread position: | 5-221 |
| Cow position: | chr8:46097296-46097518 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 33, 165 |
| Conread position: | 21-207 |
| Cow position: | chr8:38038675-38038486 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 17, 147 |
| Conread position: | 2-221 |
| Cow position: | chr9:8462584-8462360 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 36, 113 |
| Conread position: | 2-225 |
| Cow position: | chr9:49117367-49117591 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 116, 36 |
| Conread position: | 6-209 |
| Cow position: | chr9:51591249-51591456 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 32, 145 |
| Conread position: | 18-254 |
| Cow position: | chr9:56443982-56443742 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 19, 150 |
| Conread position: | 42-275 |
| Cow position: | chr9:56265580-56265343 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 84, 39 |
| Conread position: | 2-225 |
| Cow position: | chrX:387663-387888 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 141 |
| Conread position: | 2-225 |
| Cow position: | chrX:18899294-18899068 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 74, 84 |
| Conread position: | 2-242 |
| Cow position: | chrX:342683-342921 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 11, 163 |
| Conread position: | 5-221 |
| Cow position: | chrX:164436-164657 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 32, 79 |
| Conread position: | 7-207 |
| Cow position: | chrX:20366640-20366438 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 6, 102 |
| Conread position: | 7-224 |
| Cow position: | chrX:28667418-28667198 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 31, 76 |
| Conread position: | 12-207 |
| Cow position: | chrX:37684949-37684746 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 75 |
| Conread position: | 18-207 |
| Cow position: | chrX:46690840-46691033 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 11 |
| Conread position: | 21-225 |
| Cow position: | chrX:13667404-13667198 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 19, 67 |
| Conread position: | 25-207 |
| Cow position: | chrX:13264362-13264549 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 166 |
| Conread position: | 294-447 |
| Cow position: | chrX:39765451-39765604 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 93, 79 |
| Conread position: | 296-657 |
| Cow position: | chrX:8107696-8108063 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 236 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 90, 77 |
| Conread position: | 306-647 |
| Cow position: | chrX:509217-508861 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 245 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 65, 22 |