Cow genome map
| Conread name: | Pey1-53D02 |
| Conread position: | 8-263 |
| Cow position: | chr10:10081212-10080960 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 78, 20 |
| Conread position: | 31-263 |
| Cow position: | chr10:53200564-53200329 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 58, 29 |
| Conread position: | 37-262 |
| Cow position: | chr10:52682917-52682691 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 48, 7 |
| Conread position: | 287-489 |
| Cow position: | chr10:23907747-23907947 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 8-219 |
| Cow position: | chr11:15833883-15833668 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 64, 9 |
| Conread position: | 11-265 |
| Cow position: | chr11:52941139-52940876 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 22-263 |
| Cow position: | chr11:20696218-20695969 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 134 |
| Conread position: | 324-514 |
| Cow position: | chr11:12095688-12095877 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 165, 114 |
| Conread position: | 8-263 |
| Cow position: | chr13:57141099-57141347 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 107, 46 |
| Conread position: | 8-265 |
| Cow position: | chr15:51555497-51555251 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 231, 52 |
| Conread position: | 8-276 |
| Cow position: | chr15:25575613-25575881 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 18, 193 |
| Conread position: | 27-262 |
| Cow position: | chr15:15652370-15652609 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 55, 15 |
| Conread position: | 334-508 |
| Cow position: | chr16:9589076-9589251 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 102, 120 |
| Conread position: | 94-262 |
| Cow position: | chr17:597688-597857 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 8-263 |
| Cow position: | chr18:44047454-44047711 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 11, 15 |
| Conread position: | 9-235 |
| Cow position: | chr18:43538325-43538101 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 112, 42 |
| Conread position: | 20-247 |
| Cow position: | chr18:36286610-36286381 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 66, 37 |
| Conread position: | 28-263 |
| Cow position: | chr18:51331277-51331039 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 59, 32 |
| Conread position: | 32-266 |
| Cow position: | chr18:51247093-51246854 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 268-488 |
| Cow position: | chr18:16150748-16150963 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 70, 9 |
| Conread position: | 272-489 |
| Cow position: | chr18:17999224-17999010 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 9-276 |
| Cow position: | chr19:12878745-12878473 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 73, 48 |
| Conread position: | 282-488 |
| Cow position: | chr19:4302506-4302708 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 8-262 |
| Cow position: | chr21:21478504-21478753 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 98, 48 |
| Conread position: | 9-263 |
| Cow position: | chr21:32394278-32394530 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 72, 49 |
| Conread position: | 278-513 |
| Cow position: | chr21:42960736-42960500 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 41, 65 |
| Conread position: | 8-257 |
| Cow position: | chr23:10913978-10913732 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 46, 14 |
| Conread position: | 267-487 |
| Cow position: | chr25:13793304-13793086 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 192, 0 |
| Conread position: | 8-263 |
| Cow position: | chr26:12992254-12992003 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 100, 50 |
| Conread position: | 278-511 |
| Cow position: | chr27:1676427-1676196 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 47, 8 |
| Conread position: | 8-265 |
| Cow position: | chr28:29839689-29839946 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 75, 131 |
| Conread position: | 282-434 |
| Cow position: | chr28:20665306-20665458 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-225 |
| Cow position: | chr29:5404236-5404450 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 103, 10 |
| Conread position: | 285-514 |
| Cow position: | chr29:44600447-44600217 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 205, 176 |
| Conread position: | 8-506 |
| Cow position: | chr3:30559095-30558598 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 52 |
| Conread position: | 22-262 |
| Cow position: | chr3:61882777-61882537 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 67-266 |
| Cow position: | chr3:44504324-44504524 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 11 |
| Conread position: | 259-509 |
| Cow position: | chr3:24457157-24456904 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 17, 5 |
| Conread position: | 278-512 |
| Cow position: | chr3:43418367-43418598 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 184, 0 |
| Conread position: | 333-503 |
| Cow position: | chr3:17058110-17057940 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 157, 126 |
| Conread position: | 8-263 |
| Cow position: | chr5:15414110-15413856 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 25, 56 |
| Conread position: | 10-243 |
| Cow position: | chr5:661491-661262 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 77, 50 |
| Conread position: | 272-509 |
| Cow position: | chr5:48288915-48288675 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 127, 180 |
| Conread position: | 324-509 |
| Cow position: | chr5:47828303-47828118 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 164, 135 |
| Conread position: | 7-263 |
| Cow position: | chr6:35861473-35861717 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 51, 100 |
| Conread position: | 9-263 |
| Cow position: | chr6:45497240-45497493 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 70 |
| Conread position: | 276-514 |
| Cow position: | chr6:65929348-65929585 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 11 |
| Conread position: | 8-244 |
| Cow position: | chr7:35274166-35274401 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 69, 23 |
| Conread position: | 8-266 |
| Cow position: | chr7:64896176-64895925 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 78, 16 |
| Conread position: | 15-248 |
| Cow position: | chr7:3680008-3679777 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 87, 63 |
| Conread position: | 268-511 |
| Cow position: | chr7:37068196-37068435 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 55, 32 |
| Conread position: | 278-513 |
| Cow position: | chr7:40197975-40197740 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 208, 184 |
| Conread position: | 38-263 |
| Cow position: | chr8:13970519-13970290 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 56, 85 |
| Conread position: | 282-490 |
| Cow position: | chr8:30442092-30441888 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 324-514 |
| Cow position: | chr8:8310850-8311040 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 91, 87 |
| Conread position: | 8-246 |
| Cow position: | chr9:9942451-9942213 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 48, 77 |
| Conread position: | 278-514 |
| Cow position: | chr9:5199266-5199032 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 156, 103 |
| Conread position: | 9-266 |
| Cow position: | chrX:34331324-34331574 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 74, 33 |
| Conread position: | 10-248 |
| Cow position: | chrX:11748033-11747802 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 100, 29 |
| Conread position: | 17-262 |
| Cow position: | chrX:10350191-10350437 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 20, 39 |
| Conread position: | 20-272 |
| Cow position: | chrX:24225463-24225717 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 50, 35 |
| Conread position: | 248-482 |
| Cow position: | chrX:31450923-31451155 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 32, 46 |
| Conread position: | 282-489 |
| Cow position: | chrX:26342230-26342030 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 112, 99 |
| Conread position: | 286-514 |
| Cow position: | chrX:37820112-37820341 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 25 |