Cow genome map
| Conread name: | Pig1-114G01 |
| Conread position: | 1-269 |
| Cow position: | chr1:79245156-79245424 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 4-486 |
| Cow position: | chr1:30065902-30066363 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 13 |
| Conread position: | 3-305 |
| Cow position: | chr10:48162522-48162816 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 31, 14 |
| Conread position: | 3-305 |
| Cow position: | chr10:68267269-68267556 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 182, 67 |
| Conread position: | 3-269 |
| Cow position: | chr11:22547229-22547493 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 201, 181 |
| Conread position: | 7-310 |
| Cow position: | chr11:55254200-55253907 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 177, 91 |
| Conread position: | 1-487 |
| Cow position: | chr13:47007012-47007474 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 16 |
| Conread position: | 3-250 |
| Cow position: | chr13:47612375-47612616 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 30, 14 |
| Conread position: | 19-487 |
| Cow position: | chr13:33576652-33576221 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 313 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 18, 41 |
| Conread position: | 1-481 |
| Cow position: | chr14:38646518-38646057 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 266 |
| Conread position: | 3-259 |
| Cow position: | chr14:194866-195118 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 25, 20 |
| Conread position: | 3-487 |
| Cow position: | chr14:12545817-12546266 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 14 |
| Conread position: | 1-306 |
| Cow position: | chr15:46054831-46055124 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 35, 16 |
| Conread position: | 3-487 |
| Cow position: | chr15:12417575-12417115 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 228 |
| Conread position: | 7-140 |
| Cow position: | chr15:51683023-51683156 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 23, 10 |
| Conread position: | 1-299 |
| Cow position: | chr16:24739217-24739516 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 2-487 |
| Cow position: | chr16:39616006-39616464 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 0 |
| Conread position: | 3-223 |
| Cow position: | chr16:49510025-49509806 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 173 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 34, 14 |
| Conread position: | 3-468 |
| Cow position: | chr16:7457187-7456755 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 12 |
| Conread position: | 7-155 |
| Cow position: | chr16:32290094-32290241 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 27, 10 |
| Conread position: | 8-306 |
| Cow position: | chr16:29864536-29864234 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 28, 19 |
| Conread position: | 18-318 |
| Cow position: | chr16:41168963-41169258 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 164 |
| Conread position: | 149-476 |
| Cow position: | chr16:20406872-20406568 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 3-210 |
| Cow position: | chr17:5672168-5671961 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-487 |
| Cow position: | chr17:5638540-5638080 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 0 |
| Conread position: | 7-139 |
| Cow position: | chr18:16311526-16311656 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 1-308 |
| Cow position: | chr19:19487477-19487791 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 3-237 |
| Cow position: | chr19:41212675-41212448 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 14 |
| Conread position: | 1-306 |
| Cow position: | chr2:4699735-4700032 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 35, 16 |
| Conread position: | 3-311 |
| Cow position: | chr2:55841259-55841557 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 3-356 |
| Cow position: | chr2:24688705-24689046 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 0 |
| Conread position: | 10-487 |
| Cow position: | chr2:61442354-61441873 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 299 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 142, 192 |
| Conread position: | 19-252 |
| Cow position: | chr2:76811365-76811599 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 65, 160 |
| Conread position: | 3-487 |
| Cow position: | chr20:5958601-5958141 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 14 |
| Conread position: | 3-487 |
| Cow position: | chr21:20263012-20262550 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 229 |
| Conread position: | 4-487 |
| Cow position: | chr21:35998674-35999140 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 33, 13 |
| Conread position: | 1-263 |
| Cow position: | chr22:13293255-13292991 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-487 |
| Cow position: | chr22:17893055-17892592 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 3-487 |
| Cow position: | chr22:22045231-22045695 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 226 |
| Conread position: | 8-487 |
| Cow position: | chr22:18039727-18040179 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 153 |
| Conread position: | 3-436 |
| Cow position: | chr23:4809518-4809904 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 297 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 27, 12 |
| Conread position: | 3-362 |
| Cow position: | chr25:26914502-26914848 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 27, 20 |
| Conread position: | 3-487 |
| Cow position: | chr25:15617962-15618419 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 20 |
| Conread position: | 3-136 |
| Cow position: | chr26:33534941-33534808 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 33, 14 |
| Conread position: | 3-469 |
| Cow position: | chr26:14364741-14364317 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 14 |
| Conread position: | 7-226 |
| Cow position: | chr26:6098044-6097829 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 23, 10 |
| Conread position: | 2-269 |
| Cow position: | chr27:14328262-14328528 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 124, 90 |
| Conread position: | 3-398 |
| Cow position: | chr27:8586957-8587360 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 44 |
| Conread position: | 3-456 |
| Cow position: | chr27:30641335-30640904 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 2-487 |
| Cow position: | chr29:18025690-18026144 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 21 |
| Conread position: | 3-306 |
| Cow position: | chr29:7330964-7330665 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 27, 14 |
| Conread position: | 3-480 |
| Cow position: | chr29:16098047-16097601 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 182 |
| Conread position: | 9-486 |
| Cow position: | chr29:10154532-10154982 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 8 |
| Conread position: | 1-151 |
| Cow position: | chr3:67466471-67466322 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 36, 16 |
| Conread position: | 3-492 |
| Cow position: | chr3:24531083-24531540 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 11 |
| Conread position: | 11-225 |
| Cow position: | chr3:21061321-21061107 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 25, 6 |
| Conread position: | 3-194 |
| Cow position: | chr4:49985833-49985643 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 34, 14 |
| Conread position: | 3-487 |
| Cow position: | chr5:70593691-70593234 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 241-487 |
| Cow position: | chr6:55573574-55573347 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 3-177 |
| Cow position: | chr7:35866896-35866724 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 33, 14 |
| Conread position: | 3-269 |
| Cow position: | chr7:20450505-20450235 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 147, 238 |
| Conread position: | 115-492 |
| Cow position: | chr7:27515954-27515592 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 101 |
| Conread position: | 1-165 |
| Cow position: | chr8:5243704-5243539 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 11, 17 |
| Conread position: | 5-165 |
| Cow position: | chr8:54611030-54610869 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 25, 12 |
| Conread position: | 2-154 |
| Cow position: | chr9:59411366-59411518 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 31, 15 |
| Conread position: | 1-301 |
| Cow position: | chrX:4177104-4177400 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 26 |
| Conread position: | 1-487 |
| Cow position: | chrX:41106721-41106262 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 330 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 29, 16 |
| Conread position: | 3-445 |
| Cow position: | chrX:37364009-37364425 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 14 |