Cow genome map
| Conread name: | Pig1-131J20 |
| Conread position: | 177-415 |
| Cow position: | chr10:23515413-23515653 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 72, 140 |
| Conread position: | 116-417 |
| Cow position: | chr11:35232017-35231720 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 141, 149 |
| Conread position: | 117-364 |
| Cow position: | chr11:33862901-33863157 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 90, 203 |
| Conread position: | 126-533 |
| Cow position: | chr11:52248098-52247704 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 255 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 24, 19 |
| Conread position: | 127-419 |
| Cow position: | chr11:13861496-13861792 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 12, 190 |
| Conread position: | 132-432 |
| Cow position: | chr11:47086941-47087230 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 155, 97 |
| Conread position: | 118-414 |
| Cow position: | chr12:25134643-25134941 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 16, 29 |
| Conread position: | 157-535 |
| Cow position: | chr12:8728550-8728167 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 70, 15 |
| Conread position: | 75-264 |
| Cow position: | chr13:19029304-19029494 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 172 |
| Conread position: | 90-535 |
| Cow position: | chr13:41362895-41362459 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 113 |
| Conread position: | 100-533 |
| Cow position: | chr13:57159307-57158880 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 287 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 121, 31 |
| Conread position: | 126-535 |
| Cow position: | chr13:34016839-34017254 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 275 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 110, 167 |
| Conread position: | 315-534 |
| Cow position: | chr13:19029701-19029906 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 178 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 116-422 |
| Cow position: | chr15:41147900-41147585 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 106, 99 |
| Conread position: | 127-415 |
| Cow position: | chr15:8953633-8953340 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 119, 11 |
| Conread position: | 127-415 |
| Cow position: | chr15:12770688-12770406 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 7, 71 |
| Conread position: | 132-415 |
| Cow position: | chr16:26682435-26682155 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 135, 23 |
| Conread position: | 134-419 |
| Cow position: | chr16:1704239-1703956 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 44, 57 |
| Conread position: | 147-430 |
| Cow position: | chr16:54086689-54086406 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 72, 109 |
| Conread position: | 135-365 |
| Cow position: | chr17:28931216-28930980 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 87, 121 |
| Conread position: | 126-415 |
| Cow position: | chr18:20287313-20287593 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 131-415 |
| Cow position: | chr18:41958096-41957797 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 84, 236 |
| Conread position: | 126-365 |
| Cow position: | chr19:30456157-30455907 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 126, 170 |
| Conread position: | 127-443 |
| Cow position: | chr19:19462109-19461782 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 28, 19 |
| Conread position: | 131-524 |
| Cow position: | chr19:26487829-26487432 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 165 |
| Conread position: | 132-521 |
| Cow position: | chr19:24671919-24672316 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 112, 204 |
| Conread position: | 135-414 |
| Cow position: | chr19:43511184-43510897 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 57, 199 |
| Conread position: | 139-535 |
| Cow position: | chr19:16006107-16005726 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 98, 39 |
| Conread position: | 116-419 |
| Cow position: | chr2:84757899-84757586 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 137, 53 |
| Conread position: | 131-501 |
| Cow position: | chr2:62246576-62246945 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 99, 64 |
| Conread position: | 100-535 |
| Cow position: | chr20:2890019-2890458 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 19, 36 |
| Conread position: | 113-419 |
| Cow position: | chr20:7887374-7887073 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 193, 28 |
| Conread position: | 118-525 |
| Cow position: | chr21:40083196-40082785 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 269 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 134, 72 |
| Conread position: | 131-513 |
| Cow position: | chr22:5059119-5058733 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 255 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 112, 62 |
| Conread position: | 169-535 |
| Cow position: | chr22:29203989-29203621 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 68, 161 |
| Conread position: | 94-367 |
| Cow position: | chr23:9237910-9237645 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 7, 26 |
| Conread position: | 112-496 |
| Cow position: | chr23:18446540-18446159 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 114, 23 |
| Conread position: | 126-524 |
| Cow position: | chr24:11934459-11934869 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 272 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 111, 175 |
| Conread position: | 127-415 |
| Cow position: | chr25:32299154-32298877 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 94, 36 |
| Conread position: | 135-535 |
| Cow position: | chr25:1025195-1025603 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 268 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 125, 78 |
| Conread position: | 153-408 |
| Cow position: | chr25:24951856-24952112 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 53 |
| Conread position: | 134-432 |
| Cow position: | chr26:18340207-18339896 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 73, 28 |
| Conread position: | 116-432 |
| Cow position: | chr28:22843050-22842730 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 133, 219 |
| Conread position: | 118-419 |
| Cow position: | chr28:32635366-32635673 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 106, 89 |
| Conread position: | 125-415 |
| Cow position: | chr28:9335182-9335470 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 124, 22 |
| Conread position: | 127-526 |
| Cow position: | chr28:11005490-11005075 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 47, 170 |
| Conread position: | 116-525 |
| Cow position: | chr29:34121010-34121417 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 267 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 141, 31 |
| Conread position: | 116-383 |
| Cow position: | chr3:15725193-15724927 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 47, 13 |
| Conread position: | 128-496 |
| Cow position: | chr3:18852348-18851986 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 248 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 128, 18 |
| Conread position: | 131-521 |
| Cow position: | chr3:8563673-8564058 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 94, 84 |
| Conread position: | 147-504 |
| Cow position: | chr3:64669762-64670119 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 244 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 94, 68 |
| Conread position: | 122-422 |
| Cow position: | chr4:51024374-51024072 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 137, 16 |
| Conread position: | 131-415 |
| Cow position: | chr5:50097578-50097859 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 31, 48 |
| Conread position: | 131-505 |
| Cow position: | chr5:37653623-37653247 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 253 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 21, 102 |
| Conread position: | 130-512 |
| Cow position: | chr6:50621964-50621588 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 112, 43 |
| Conread position: | 105-503 |
| Cow position: | chr7:31525862-31526266 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 108, 11 |
| Conread position: | 117-415 |
| Cow position: | chr7:28536283-28535982 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 103, 18 |
| Conread position: | 118-430 |
| Cow position: | chr7:983683-983361 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 15, 183 |
| Conread position: | 238-535 |
| Cow position: | chr7:265587-265295 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 49, 8 |
| Conread position: | 116-413 |
| Cow position: | chr8:46049864-46049566 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 115, 41 |
| Conread position: | 132-532 |
| Cow position: | chr8:30889431-30889031 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 270 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 105, 86 |
| Conread position: | 147-429 |
| Cow position: | chr8:4300373-4300094 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 16, 27 |
| Conread position: | 116-534 |
| Cow position: | chr9:32985760-32985352 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 274 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 143, 120 |
| Conread position: | 117-383 |
| Cow position: | chr9:9672459-9672186 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 82, 188 |
| Conread position: | 133-415 |
| Cow position: | chr9:23603501-23603216 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 99, 18 |
| Conread position: | 133-535 |
| Cow position: | chr9:6705153-6705552 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 261 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 92, 246 |
| Conread position: | 116-415 |
| Cow position: | chrX:24225319-24225622 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 100, 15 |
| Conread position: | 125-521 |
| Cow position: | chrX:41860781-41860393 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 143, 72 |
| Conread position: | 125-535 |
| Cow position: | chrX:37959906-37959500 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 274 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 9, 162 |
| Conread position: | 126-415 |
| Cow position: | chrX:44428463-44428748 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 120, 84 |
| Conread position: | 126-529 |
| Cow position: | chrX:26425043-26425441 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 8, 81 |