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Cow genome map

           
Conread name:
           
Pig1-132O22b
        

               
Conread position:
               
58-223
               

               
Cow position:
               
chr1:16338087-16337920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
58-223
               

               
Cow position:
               
chr1:61748308-61748138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr1:22727434-22727606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr1:26446299-26446468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
127, 35
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr1:31498262-31498434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
104, 37
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr1:34684624-34684800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr1:51967396-51967563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr1:52053963-52054134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
127, 82
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr1:53396847-53397018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr1:53649794-53649966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr1:61563179-61563351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr1:68818763-68818595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
123, 90
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr1:68846566-68846396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
129, 86
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr1:99108085-99107913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
58-226
               

               
Cow position:
               
chr1:72307178-72307006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
126, 100
               

               
Conread position:
               
59-225
               

               
Cow position:
               
chr1:81357504-81357342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
123, 32
               

               
Conread position:
               
60-223
               

               
Cow position:
               
chr1:28414073-28413912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
49, 79
               

               
Conread position:
               
76-225
               

               
Cow position:
               
chr1:72864109-72864264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
79-225
               

               
Cow position:
               
chr1:42875493-42875342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
79-225
               

               
Cow position:
               
chr1:99117178-99117329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
96-228
               

               
Cow position:
               
chr1:38400830-38400955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
106-225
               

               
Cow position:
               
chr1:24781288-24781166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
74, 44
               

               
Conread position:
               
54-225
               

               
Cow position:
               
chr10:5785074-5784904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
131, 100
               

               
Conread position:
               
55-225
               

               
Cow position:
               
chr10:21656292-21656462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
130, 11
               

               
Conread position:
               
57-225
               

               
Cow position:
               
chr10:38724436-38724605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
123, 85
               

               
Conread position:
               
58-224
               

               
Cow position:
               
chr10:2429354-2429186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
124, 18
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr10:1979814-1979642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr10:2612255-2612426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
124, 67
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr10:3984279-3984451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr10:22529055-22528881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
126, 103
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr10:22579649-22579479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
123, 27
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr10:34666745-34666573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr10:45484837-45484670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr10:45768933-45769100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 95
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr10:51864160-51864000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
123, 68
               

               
Conread position:
               
60-225
               

               
Cow position:
               
chr10:6245868-6245706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
60-225
               

               
Cow position:
               
chr10:49145409-49145580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
92, 5
               

               
Conread position:
               
75-225
               

               
Cow position:
               
chr10:31816913-31816758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
78-225
               

               
Cow position:
               
chr10:23934938-23935090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
102-224
               

               
Cow position:
               
chr10:76309-76436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
115-225
               

               
Cow position:
               
chr10:34656457-34656342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
55-182
               

               
Cow position:
               
chr11:58139507-58139634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
56-224
               

               
Cow position:
               
chr11:7380873-7381044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
128, 84
               

               
Conread position:
               
58-210
               

               
Cow position:
               
chr11:75354008-75354166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
58-223
               

               
Cow position:
               
chr11:13062602-13062432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
58-224
               

               
Cow position:
               
chr11:7324315-7324484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
123, 82
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr11:260342-260173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
129, 19
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr11:4205983-4206151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
48, 98
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr11:10365581-10365419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
126, 58
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr11:11256874-11257044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
127, 48
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr11:30190558-30190731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr11:59871621-59871792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
129, 90
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr11:67954317-67954149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr11:73513567-73513395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr11:84773970-84774142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
59-224
               

               
Cow position:
               
chr11:33733771-33733602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
126, 6
               

               
Conread position:
               
60-220
               

               
Cow position:
               
chr11:67599386-67599551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
77-225
               

               
Cow position:
               
chr11:58399156-58399309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
90-225
               

               
Cow position:
               
chr12:19198156-19198296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
118-223
               

               
Cow position:
               
chr12:7885739-7885629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
55-225
               

               
Cow position:
               
chr13:22084649-22084822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
129, 51
               

               
Conread position:
               
58-223
               

               
Cow position:
               
chr13:3001462-3001301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
111, 98
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr13:15430048-15429883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
104, 121
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr13:36351710-36351878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
124, 32
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr13:44324081-44323909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr13:46427601-46427773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr13:47357701-47357542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr13:47577473-47577644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
123, 78
               

               
Conread position:
               
60-225
               

               
Cow position:
               
chr13:19843354-19843522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
122, 41
               

               
Conread position:
               
77-254
               

               
Cow position:
               
chr13:45072264-45072450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr14:21533888-21534057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
58-226
               

               
Cow position:
               
chr14:12483151-12483324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
62-225
               

               
Cow position:
               
chr14:8102918-8102751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
120, 74
               

               
Conread position:
               
62-227
               

               
Cow position:
               
chr14:38812960-38812792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
123, 31
               

               
Conread position:
               
77-224
               

               
Cow position:
               
chr14:9512161-9512011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
107, 51
               

               
Conread position:
               
47-226
               

               
Cow position:
               
chr15:36423870-36423686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr15:503066-503238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr15:4730239-4730409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
127, 50
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr15:26157764-26157934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
124, 109
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr15:33229297-33229126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr15:39091440-39091272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
127, 68
               

               
Conread position:
               
58-226
               

               
Cow position:
               
chr15:24969194-24969020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
75-225
               

               
Cow position:
               
chr15:29341334-29341186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
87, 104
               

               
Conread position:
               
58-216
               

               
Cow position:
               
chr16:8872025-8871870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
68, 114
               

               
Conread position:
               
58-224
               

               
Cow position:
               
chr16:37671091-37670914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr16:17141812-17141981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
129, 49
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr16:25173652-25173819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
130, 155
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr16:39475236-39475407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
126, 117
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr16:47772667-47772842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
108, 58
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr16:48495730-48495558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
72, 88
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr16:51040958-51041125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
134, 54
               

               
Conread position:
               
60-222
               

               
Cow position:
               
chr16:42118160-42118318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
125, 54
               

               
Conread position:
               
67-224
               

               
Cow position:
               
chr16:24444856-24445017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
104-225
               

               
Cow position:
               
chr16:49142621-49142495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
32-182
               

               
Cow position:
               
chr17:16903525-16903674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
58-223
               

               
Cow position:
               
chr17:3305541-3305711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
74-225
               

               
Cow position:
               
chr17:29156359-29156511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
98-224
               

               
Cow position:
               
chr17:44481851-44481981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
85, 38
               

               
Conread position:
               
49-224
               

               
Cow position:
               
chr18:12269335-12269513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
136, 95
               

               
Conread position:
               
58-210
               

               
Cow position:
               
chr18:2853601-2853449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
123, 96
               

               
Conread position:
               
58-224
               

               
Cow position:
               
chr18:6882066-6881895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr18:3362255-3362422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
123, 48
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr18:6104214-6104040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr18:16471989-16471816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr18:36457448-36457617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
131, 49
               

               
Conread position:
               
58-227
               

               
Cow position:
               
chr18:15172045-15172214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
127, 78
               

               
Conread position:
               
74-225
               

               
Cow position:
               
chr18:53872098-53872253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
108, 122
               

               
Conread position:
               
75-225
               

               
Cow position:
               
chr18:22791210-22791062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
110, 55
               

               
Conread position:
               
77-225
               

               
Cow position:
               
chr18:44261277-44261429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
108, 48
               

               
Conread position:
               
103-225
               

               
Cow position:
               
chr18:14965519-14965646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
58-210
               

               
Cow position:
               
chr19:39750415-39750565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr19:15765945-15766102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
127, 33
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr19:19172856-19173020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
127, 93
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr19:35381876-35381707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
126, 43
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr19:35621723-35621895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
72, 101
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr19:42866669-42866832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
127, 79
               

               
Conread position:
               
76-225
               

               
Cow position:
               
chr19:17883178-17883332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
77-225
               

               
Cow position:
               
chr19:7064906-7065044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
79-225
               

               
Cow position:
               
chr19:44839954-44839802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
101-225
               

               
Cow position:
               
chr19:1663309-1663439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
55-225
               

               
Cow position:
               
chr2:48360583-48360758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
71, 102
               

               
Conread position:
               
58-224
               

               
Cow position:
               
chr2:60955271-60955440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
123, 78
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr2:2591045-2590874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
127, 68
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr2:62051298-62051140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
58-255
               

               
Cow position:
               
chr2:14882876-14883068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
141, 126
               

               
Conread position:
               
59-225
               

               
Cow position:
               
chr2:15569445-15569275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
126, 60
               

               
Conread position:
               
60-225
               

               
Cow position:
               
chr2:34592887-34592730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
62-225
               

               
Cow position:
               
chr2:383480-383313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
120, 63
               

               
Conread position:
               
62-225
               

               
Cow position:
               
chr2:36058798-36058634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
117, 69
               

               
Conread position:
               
62-225
               

               
Cow position:
               
chr2:41183662-41183830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
75-225
               

               
Cow position:
               
chr2:19288658-19288504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
75-225
               

               
Cow position:
               
chr2:41009770-41009615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
77-225
               

               
Cow position:
               
chr2:25991951-25992100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
104, 16
               

               
Conread position:
               
78-225
               

               
Cow position:
               
chr2:23492452-23492604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
79-225
               

               
Cow position:
               
chr2:58565093-58564947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
106, 51
               

               
Conread position:
               
82-225
               

               
Cow position:
               
chr2:19960988-19961130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
103, 48
               

               
Conread position:
               
85-225
               

               
Cow position:
               
chr2:68489662-68489517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
95-225
               

               
Cow position:
               
chr2:20856918-20856783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
98-225
               

               
Cow position:
               
chr2:30909178-30909311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
108-225
               

               
Cow position:
               
chr2:42502218-42502339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
77, 10
               

               
Conread position:
               
120-225
               

               
Cow position:
               
chr2:55876346-55876456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
56-225
               

               
Cow position:
               
chr20:32351758-32351930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
126, 45
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr20:25658865-25658694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
127, 67
               

               
Conread position:
               
59-225
               

               
Cow position:
               
chr20:19364721-19364555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
123, 6
               

               
Conread position:
               
76-225
               

               
Cow position:
               
chr20:3510033-3510186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
82-225
               

               
Cow position:
               
chr20:28113172-28113312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
103, 64
               

               
Conread position:
               
89-225
               

               
Cow position:
               
chr20:32085265-32085124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
104-225
               

               
Cow position:
               
chr20:34598151-34598029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
77, 48
               

               
Conread position:
               
55-230
               

               
Cow position:
               
chr21:2768578-2768398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr21:2905521-2905352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr21:22463459-22463631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr21:31275615-31275783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
126, 43
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr21:33984007-33983835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr21:37147504-37147344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
127, 73
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr21:47532005-47532174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
97, 28
               

               
Conread position:
               
75-227
               

               
Cow position:
               
chr21:12802814-12802666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
88, 96
               

               
Conread position:
               
30-225
               

               
Cow position:
               
chr22:8480283-8480484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
45-182
               

               
Cow position:
               
chr22:15888895-15889032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
54-225
               

               
Cow position:
               
chr22:36595417-36595242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
131, 27
               

               
Conread position:
               
55-225
               

               
Cow position:
               
chr22:10313723-10313894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
129, 31
               

               
Conread position:
               
56-225
               

               
Cow position:
               
chr22:19048682-19048504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr22:8504558-8504729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr22:14817543-14817373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
131, 54
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr22:29185025-29184853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr22:36556044-36555881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
127, 56
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr22:36584534-36584362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
58-226
               

               
Cow position:
               
chr22:36572439-36572272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
124, 49
               

               
Conread position:
               
60-225
               

               
Cow position:
               
chr22:31598406-31598571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
129, 50
               

               
Conread position:
               
60-225
               

               
Cow position:
               
chr22:34615137-34615307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
65-226
               

               
Cow position:
               
chr22:36503599-36503433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
78-225
               

               
Cow position:
               
chr22:26167673-26167521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
90-225
               

               
Cow position:
               
chr22:41972413-41972273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
118-226
               

               
Cow position:
               
chr22:37323424-37323537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr23:29460163-29459989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr23:29625062-29625234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
96-225
               

               
Cow position:
               
chr23:17403739-17403874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
58-224
               

               
Cow position:
               
chr24:6146476-6146645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
123, 54
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr24:24249320-24249149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
124, 78
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr24:29179543-29179719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr24:45003609-45003773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
111, 120
               

               
Conread position:
               
65-225
               

               
Cow position:
               
chr24:31356790-31356949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
75-225
               

               
Cow position:
               
chr24:14865833-14865677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
79, 54
               

               
Conread position:
               
75-225
               

               
Cow position:
               
chr24:14867759-14867603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
79, 54
               

               
Conread position:
               
118-225
               

               
Cow position:
               
chr24:17368684-17368569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
50-224
               

               
Cow position:
               
chr25:19367826-19367646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr25:9958173-9958006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
77-225
               

               
Cow position:
               
chr25:9395311-9395460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
60, 79
               

               
Conread position:
               
25-225
               

               
Cow position:
               
chr26:3700069-3700277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
51-225
               

               
Cow position:
               
chr26:14173200-14173369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
86, 104
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr26:11269362-11269528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
51, 122
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr26:25392931-25393092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
127, 19
               

               
Conread position:
               
77-223
               

               
Cow position:
               
chr26:16781334-16781478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
107, 55
               

               
Conread position:
               
58-224
               

               
Cow position:
               
chr27:15374908-15375074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
127, 20
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr27:4804877-4805049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr27:4811326-4811498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
113, 37
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr27:14669286-14669451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr27:28051694-28051524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
125, 71
               

               
Conread position:
               
65-224
               

               
Cow position:
               
chr27:1501621-1501774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
79-225
               

               
Cow position:
               
chr27:21392122-21392272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
87-223
               

               
Cow position:
               
chr27:25784638-25784495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 70
               

               
Conread position:
               
113-225
               

               
Cow position:
               
chr27:15405772-15405886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
58-223
               

               
Cow position:
               
chr28:13606567-13606737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
51, 10
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr28:2280766-2280596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr28:3001721-3001549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr28:8971212-8971384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr28:10279987-10280149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr28:17030960-17030788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr28:30329004-30328839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
129, 96
               

               
Conread position:
               
60-225
               

               
Cow position:
               
chr28:8786449-8786623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
71-225
               

               
Cow position:
               
chr28:3745115-3745270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
114, 47
               

               
Conread position:
               
78-225
               

               
Cow position:
               
chr28:10590108-10589957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
106, 11
               

               
Conread position:
               
95-225
               

               
Cow position:
               
chr28:1836965-1837095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr29:17153351-17153515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
124, 92
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr29:24577758-24577931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr29:36208803-36208974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
129, 67
               

               
Conread position:
               
58-227
               

               
Cow position:
               
chr29:32962420-32962595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
60-225
               

               
Cow position:
               
chr29:10237559-10237389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
77-225
               

               
Cow position:
               
chr29:7701259-7701112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
104, 82
               

               
Conread position:
               
23-225
               

               
Cow position:
               
chr3:16657882-16657677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
158, 126
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr3:30938516-30938688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr3:37983345-37983174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
127, 35
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr3:52257495-52257323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr3:77225753-77225925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
60-224
               

               
Cow position:
               
chr3:48361956-48362128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
64, 44
               

               
Conread position:
               
60-225
               

               
Cow position:
               
chr3:38862757-38862916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
77, 31
               

               
Conread position:
               
65-225
               

               
Cow position:
               
chr3:3885170-3885007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
120, 84
               

               
Conread position:
               
75-224
               

               
Cow position:
               
chr3:84198820-84198973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
110, 45
               

               
Conread position:
               
76-225
               

               
Cow position:
               
chr3:15663406-15663252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
78-225
               

               
Cow position:
               
chr3:26919770-26919914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
104, 70
               

               
Conread position:
               
79-225
               

               
Cow position:
               
chr3:64683971-64683821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
87-225
               

               
Cow position:
               
chr3:10412295-10412438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr4:3252719-3252547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr4:3284533-3284361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr4:3849424-3849596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr4:4086536-4086367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
129, 10
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr4:26468057-26468228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
124, 113
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr4:36669407-36669568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
111, 59
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr4:43841148-43840982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
124, 74
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr4:66174497-66174324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
100, 78
               

               
Conread position:
               
58-228
               

               
Cow position:
               
chr4:37703080-37703255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
59-225
               

               
Cow position:
               
chr4:65918516-65918686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
126, 6
               

               
Conread position:
               
60-226
               

               
Cow position:
               
chr4:4185005-4185176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
62-225
               

               
Cow position:
               
chr4:17775940-17775772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
68-225
               

               
Cow position:
               
chr4:3474511-3474673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
75-225
               

               
Cow position:
               
chr4:11192797-11192952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
83-225
               

               
Cow position:
               
chr4:12454814-12454961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
87-224
               

               
Cow position:
               
chr4:54189624-54189766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
96-225
               

               
Cow position:
               
chr4:20027657-20027524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
89, 36
               

               
Conread position:
               
110-225
               

               
Cow position:
               
chr4:30171489-30171369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
118-225
               

               
Cow position:
               
chr4:25983174-25983286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
47-225
               

               
Cow position:
               
chr5:62160010-62159828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
136, 116
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr5:14631340-14631168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr5:52646627-52646457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
125, 90
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr5:53834579-53834749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
126, 99
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr5:57983918-57983746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
76, 7
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr5:69519526-69519691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
124, 43
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr5:71457121-71456949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
60-225
               

               
Cow position:
               
chr5:18491333-18491503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
61-225
               

               
Cow position:
               
chr5:62377302-62377463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
121, 85
               

               
Conread position:
               
84-225
               

               
Cow position:
               
chr5:72046712-72046566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
104-225
               

               
Cow position:
               
chr5:16207214-16207089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
107-225
               

               
Cow position:
               
chr5:47697232-47697109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
113-225
               

               
Cow position:
               
chr5:57936142-57936025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
58-216
               

               
Cow position:
               
chr6:32286618-32286781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr6:1498263-1498434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
124, 78
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr6:35600743-35600915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr6:38438670-38438842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr6:47380730-47380902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
58-226
               

               
Cow position:
               
chr6:10694777-10694959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
60-225
               

               
Cow position:
               
chr6:8634238-8634069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
127, 82
               

               
Conread position:
               
60-225
               

               
Cow position:
               
chr6:52249442-52249278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
93, 111
               

               
Conread position:
               
96-225
               

               
Cow position:
               
chr6:29688967-29689094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
58-224
               

               
Cow position:
               
chr7:56887855-56887684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
58-224
               

               
Cow position:
               
chr7:57516811-57516976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
123, 72
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr7:13238451-13238279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr7:19044064-19043893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
127, 88
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr7:30116067-30115895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr7:30275160-30275329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
124, 110
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr7:41873164-41872997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr7:43281425-43281591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr7:48242362-48242528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
127, 74
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr7:55688822-55688650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
62-225
               

               
Cow position:
               
chr7:45929011-45928843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
76-225
               

               
Cow position:
               
chr7:39400904-39401058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
79-230
               

               
Cow position:
               
chr7:64104451-64104295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
96-225
               

               
Cow position:
               
chr7:20167624-20167756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
96-225
               

               
Cow position:
               
chr7:35742752-35742886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
97-225
               

               
Cow position:
               
chr7:23457818-23457686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
87, 63
               

               
Conread position:
               
106-225
               

               
Cow position:
               
chr7:42594339-42594215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
115-225
               

               
Cow position:
               
chr7:48722870-48722755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
58-224
               

               
Cow position:
               
chr8:24868871-24868700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr8:8386880-8387052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr8:18056621-18056793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr8:24904186-24904360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr8:27956619-27956450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
127, 56
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr8:39166058-39165891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
127, 18
               

               
Conread position:
               
60-225
               

               
Cow position:
               
chr8:29918628-29918458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
61-225
               

               
Cow position:
               
chr8:6077610-6077457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
76-234
               

               
Cow position:
               
chr8:3291789-3291631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
113, 9
               

               
Conread position:
               
77-225
               

               
Cow position:
               
chr8:24373082-24372931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
108, 43
               

               
Conread position:
               
58-223
               

               
Cow position:
               
chr9:51692627-51692457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
58-224
               

               
Cow position:
               
chr9:26088012-26087838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr9:9958192-9958019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr9:17870487-17870659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr9:18071477-18071647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
127, 82
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr9:23421579-23421751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
60-225
               

               
Cow position:
               
chr9:29337898-29338071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
61-225
               

               
Cow position:
               
chr9:1939037-1938870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
62-225
               

               
Cow position:
               
chr9:59508182-59508014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
118-225
               

               
Cow position:
               
chr9:9415010-9415121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
63, 18
               

               
Conread position:
               
50-225
               

               
Cow position:
               
chrX:4406777-4406956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
135, 80
               

               
Conread position:
               
58-218
               

               
Cow position:
               
chrX:33537485-33537648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
58-224
               

               
Cow position:
               
chrX:620359-620192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
129, 7
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chrX:13178705-13178534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
126, 88
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chrX:16325623-16325456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
120, 19
               

               
Conread position:
               
58-226
               

               
Cow position:
               
chrX:34564015-34564184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
77-225
               

               
Cow position:
               
chrX:29047035-29047188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
81-225
               

               
Cow position:
               
chrX:4558244-4558393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
82-225
               

               
Cow position:
               
chrX:9261339-9261487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
103, 0