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Cow genome map

           
Conread name:
           
Pig1-30L12
        

               
Conread position:
               
3-335
               

               
Cow position:
               
chr10:4191517-4191844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
108, 30
               

               
Conread position:
               
14-320
               

               
Cow position:
               
chr10:31538373-31538079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
142, 18
               

               
Conread position:
               
17-249
               

               
Cow position:
               
chr10:8340585-8340359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
165, 16
               

               
Conread position:
               
17-319
               

               
Cow position:
               
chr10:22101949-22101649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-328
               

               
Cow position:
               
chr10:1377953-1377648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chr10:29845933-29846250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr10:279897-280229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr10:5848916-5849232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr10:11698954-11698637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr10:21399960-21400277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr10:28642244-28641933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
166, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr10:39180501-39180177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
59, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr10:47907641-47907324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr10:56065384-56065067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr10:7281377-7281696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr10:16926247-16925929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr10:19512321-19512004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
145, 19
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr10:38344649-38344962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr10:39040593-39040903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
140, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr10:57989279-57989595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr10:62408133-62408452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-338
               

               
Cow position:
               
chr10:19714854-19715172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-338
               

               
Cow position:
               
chr10:30684802-30685116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
18-277
               

               
Cow position:
               
chr10:26616753-26616495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
26-246
               

               
Cow position:
               
chr10:11684944-11685162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
85, 7
               

               
Conread position:
               
26-296
               

               
Cow position:
               
chr10:10416610-10416348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 76
               

               
Conread position:
               
26-328
               

               
Cow position:
               
chr10:41632329-41632041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
108, 7
               

               
Conread position:
               
26-334
               

               
Cow position:
               
chr10:8326591-8326896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
130, 7
               

               
Conread position:
               
33-319
               

               
Cow position:
               
chr10:14929574-14929298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
144, 42
               

               
Conread position:
               
34-269
               

               
Cow position:
               
chr10:43263242-43263483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
94, 56
               

               
Conread position:
               
37-333
               

               
Cow position:
               
chr10:39779926-39779636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
119, 56
               

               
Conread position:
               
37-335
               

               
Cow position:
               
chr10:41567794-41567496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
125, 51
               

               
Conread position:
               
43-334
               

               
Cow position:
               
chr10:3542540-3542826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
139, 50
               

               
Conread position:
               
90-345
               

               
Cow position:
               
chr10:39815842-39816104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 174
               

               
Conread position:
               
105-337
               

               
Cow position:
               
chr10:17432631-17432858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
77, 36
               

               
Conread position:
               
108-334
               

               
Cow position:
               
chr10:25564638-25564863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
57, 179
               

               
Conread position:
               
115-335
               

               
Cow position:
               
chr10:32578903-32578682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
54, 198
               

               
Conread position:
               
116-346
               

               
Cow position:
               
chr10:16476856-16476634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 17
               

               
Conread position:
               
130-351
               

               
Cow position:
               
chr10:50312945-50312721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
3-335
               

               
Cow position:
               
chr11:52419759-52419420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
159, 30
               

               
Conread position:
               
7-277
               

               
Cow position:
               
chr11:28054252-28054519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
155, 9
               

               
Conread position:
               
14-328
               

               
Cow position:
               
chr11:9156804-9157112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
148, 19
               

               
Conread position:
               
15-239
               

               
Cow position:
               
chr11:10052073-10051851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
141, 28
               

               
Conread position:
               
17-313
               

               
Cow position:
               
chr11:29668260-29668555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-319
               

               
Cow position:
               
chr11:44252148-44251848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
145, 18
               

               
Conread position:
               
17-329
               

               
Cow position:
               
chr11:63654988-63655299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chr11:50027509-50027815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
141, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr11:5342868-5343185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr11:20733893-20734210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr11:36743832-36744148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr11:61400711-61401019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
166, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr11:64046347-64046030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr11:64081734-64082051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr11:67846222-67846539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
148, 15
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr11:73477657-73477340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr11:26124578-26124892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
20-319
               

               
Cow position:
               
chr11:42432496-42432200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
136, 13
               

               
Conread position:
               
26-284
               

               
Cow position:
               
chr11:53286824-53287082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
128, 81
               

               
Conread position:
               
26-335
               

               
Cow position:
               
chr11:19063910-19064217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
157, 7
               

               
Conread position:
               
26-335
               

               
Cow position:
               
chr11:28108490-28108182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 7
               

               
Conread position:
               
33-335
               

               
Cow position:
               
chr11:57627704-57628014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
122, 71
               

               
Conread position:
               
33-351
               

               
Cow position:
               
chr11:1495756-1496063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
129, 43
               

               
Conread position:
               
34-310
               

               
Cow position:
               
chr11:52766939-52766662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
122, 59
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr11:23877643-23877340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
128, 65
               

               
Conread position:
               
34-349
               

               
Cow position:
               
chr11:14728798-14729101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 25
               

               
Conread position:
               
55-335
               

               
Cow position:
               
chr11:9734349-9734631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
99, 33
               

               
Conread position:
               
97-337
               

               
Cow position:
               
chr11:4270582-4270824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 58
               

               
Conread position:
               
160-335
               

               
Cow position:
               
chr11:38505398-38505573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 124
               

               
Conread position:
               
5-335
               

               
Cow position:
               
chr12:21371321-21371001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
141, 11
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr12:4158013-4157696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr12:8197852-8197535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr12:11098873-11098566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr12:28765382-28765699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
95, 17
               

               
Conread position:
               
26-332
               

               
Cow position:
               
chr12:32654170-32653866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
128, 7
               

               
Conread position:
               
36-337
               

               
Cow position:
               
chr12:6406026-6406327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
76, 49
               

               
Conread position:
               
37-337
               

               
Cow position:
               
chr12:21198582-21198284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
119, 268
               

               
Conread position:
               
105-335
               

               
Cow position:
               
chr12:16822026-16821794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
105-335
               

               
Cow position:
               
chr12:21427243-21427013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
64, 153
               

               
Conread position:
               
116-335
               

               
Cow position:
               
chr12:33986702-33986481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
3-335
               

               
Cow position:
               
chr13:50109889-50109559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
159, 30
               

               
Conread position:
               
16-233
               

               
Cow position:
               
chr13:18331829-18331614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
146, 14
               

               
Conread position:
               
17-300
               

               
Cow position:
               
chr13:13900286-13900006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
165, 17
               

               
Conread position:
               
17-313
               

               
Cow position:
               
chr13:4941503-4941208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
145, 15
               

               
Conread position:
               
17-332
               

               
Cow position:
               
chr13:32545798-32545484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chr13:23002888-23003203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr13:30244263-30244580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
95, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr13:31733670-31733987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
137, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr13:41316274-41315957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr13:47229586-47229903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr13:49974099-49973783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr13:58118493-58118809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr13:1592735-1593054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr13:32737407-32737722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-338
               

               
Cow position:
               
chr13:15520090-15520398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-339
               

               
Cow position:
               
chr13:21839783-21840105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 16
               

               
Conread position:
               
17-350
               

               
Cow position:
               
chr13:32984934-32985263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
94, 16
               

               
Conread position:
               
28-335
               

               
Cow position:
               
chr13:13325153-13324847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
134, 11
               

               
Conread position:
               
33-335
               

               
Cow position:
               
chr13:2388411-2388720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
112, 71
               

               
Conread position:
               
33-335
               

               
Cow position:
               
chr13:3057710-3058012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
129, 67
               

               
Conread position:
               
33-336
               

               
Cow position:
               
chr13:31611901-31612205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
129, 71
               

               
Conread position:
               
34-333
               

               
Cow position:
               
chr13:57024102-57023809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 24
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr13:34041968-34042266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
128, 51
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr13:43982683-43982979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
128, 32
               

               
Conread position:
               
35-319
               

               
Cow position:
               
chr13:33336026-33336302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
126, 65
               

               
Conread position:
               
37-334
               

               
Cow position:
               
chr13:34325159-34325458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
119, 67
               

               
Conread position:
               
37-335
               

               
Cow position:
               
chr13:60466729-60466435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
133, 52
               

               
Conread position:
               
46-346
               

               
Cow position:
               
chr13:30656588-30656886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
105, 54
               

               
Conread position:
               
62-263
               

               
Cow position:
               
chr13:38536462-38536662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
121, 9
               

               
Conread position:
               
93-328
               

               
Cow position:
               
chr13:34910817-34911052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
63, 83
               

               
Conread position:
               
105-337
               

               
Cow position:
               
chr13:26844423-26844194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
55, 156
               

               
Conread position:
               
161-335
               

               
Cow position:
               
chr13:34029359-34029186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
17-318
               

               
Cow position:
               
chr14:40738801-40738510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
138, 15
               

               
Conread position:
               
17-319
               

               
Cow position:
               
chr14:33673705-33673406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
138, 16
               

               
Conread position:
               
17-333
               

               
Cow position:
               
chr14:16273005-16273313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
141, 17
               

               
Conread position:
               
17-333
               

               
Cow position:
               
chr14:20782753-20782439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
145, 15
               

               
Conread position:
               
17-333
               

               
Cow position:
               
chr14:50110865-50110550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chr14:40341060-40340748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
75, 16
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chr14:43558269-43557953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
130, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr14:5512117-5511801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
140, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr14:9101425-9101741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr14:11153871-11154187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr14:13303319-13303000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
145, 19
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr14:19327977-19328291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-338
               

               
Cow position:
               
chr14:7472657-7472344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-350
               

               
Cow position:
               
chr14:45711698-45712025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
134, 16
               

               
Conread position:
               
20-337
               

               
Cow position:
               
chr14:48254011-48254324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
142, 14
               

               
Conread position:
               
20-351
               

               
Cow position:
               
chr14:45189484-45189806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
132, 13
               

               
Conread position:
               
25-348
               

               
Cow position:
               
chr14:21744253-21743933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 14
               

               
Conread position:
               
33-337
               

               
Cow position:
               
chr14:22031132-22031443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
33-337
               

               
Cow position:
               
chr14:44226676-44226374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
118, 22
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr14:17000784-17001083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
128, 66
               

               
Conread position:
               
36-337
               

               
Cow position:
               
chr14:48970953-48970658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
119, 38
               

               
Conread position:
               
37-337
               

               
Cow position:
               
chr14:30584681-30584980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
136, 67
               

               
Conread position:
               
39-324
               

               
Cow position:
               
chr14:47641995-47641715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 20
               

               
Conread position:
               
55-337
               

               
Cow position:
               
chr14:33393524-33393804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
107, 45
               

               
Conread position:
               
116-333
               

               
Cow position:
               
chr14:29047708-29047927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
3-346
               

               
Cow position:
               
chr15:2413254-2413599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
152, 96
               

               
Conread position:
               
16-263
               

               
Cow position:
               
chr15:8057592-8057347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
146, 14
               

               
Conread position:
               
16-284
               

               
Cow position:
               
chr15:38980964-38980697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
131, 18
               

               
Conread position:
               
16-317
               

               
Cow position:
               
chr15:32507336-32507644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
16, 84
               

               
Conread position:
               
17-290
               

               
Cow position:
               
chr15:789279-789551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-333
               

               
Cow position:
               
chr15:5980657-5980340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
134, 16
               

               
Conread position:
               
17-333
               

               
Cow position:
               
chr15:50123649-50123964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr15:1772791-1772474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr15:1882213-1882530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr15:2647361-2647680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
45, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr15:4142525-4142842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr15:3009559-3009877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
141, 15
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr15:31359180-31358866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr15:32494091-32494407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr15:35753294-35753617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
80, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr15:42937007-42936694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
20-319
               

               
Cow position:
               
chr15:35735869-35735571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
12, 86
               

               
Conread position:
               
20-337
               

               
Cow position:
               
chr15:524567-524881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
142, 14
               

               
Conread position:
               
20-350
               

               
Cow position:
               
chr15:16508282-16507964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 13
               

               
Conread position:
               
26-319
               

               
Cow position:
               
chr15:6079037-6078755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
130, 7
               

               
Conread position:
               
26-337
               

               
Cow position:
               
chr15:1834186-1834488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
121, 7
               

               
Conread position:
               
29-335
               

               
Cow position:
               
chr15:7983739-7984039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
154, 71
               

               
Conread position:
               
31-334
               

               
Cow position:
               
chr15:51715243-51714940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
129, 48
               

               
Conread position:
               
33-295
               

               
Cow position:
               
chr15:32711371-32711118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
129, 29
               

               
Conread position:
               
33-334
               

               
Cow position:
               
chr15:40106142-40105854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
118, 66
               

               
Conread position:
               
33-335
               

               
Cow position:
               
chr15:444883-444583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
33-335
               

               
Cow position:
               
chr15:28489870-28490165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
129, 74
               

               
Conread position:
               
34-334
               

               
Cow position:
               
chr15:19737773-19738070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
128, 66
               

               
Conread position:
               
37-335
               

               
Cow position:
               
chr15:1518876-1519174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
121, 62
               

               
Conread position:
               
53-337
               

               
Cow position:
               
chr15:3261071-3261354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
109, 51
               

               
Conread position:
               
55-351
               

               
Cow position:
               
chr15:31784533-31784819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
101, 39
               

               
Conread position:
               
95-335
               

               
Cow position:
               
chr15:36077469-36077223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
97-290
               

               
Cow position:
               
chr15:6553597-6553793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
108-337
               

               
Cow position:
               
chr15:9912842-9912616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
145-335
               

               
Cow position:
               
chr15:29010007-29009815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
7-337
               

               
Cow position:
               
chr16:12537966-12538293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 7
               

               
Conread position:
               
14-350
               

               
Cow position:
               
chr16:29983795-29983474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
137, 20
               

               
Conread position:
               
16-337
               

               
Cow position:
               
chr16:25457512-25457832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
146, 18
               

               
Conread position:
               
17-219
               

               
Cow position:
               
chr16:43852171-43852368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
145, 15
               

               
Conread position:
               
17-272
               

               
Cow position:
               
chr16:12669938-12670185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
166, 16
               

               
Conread position:
               
17-281
               

               
Cow position:
               
chr16:15476792-15476531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
17-281
               

               
Cow position:
               
chr16:28197727-28197991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
147, 16
               

               
Conread position:
               
17-319
               

               
Cow position:
               
chr16:10203488-10203788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
95, 17
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr16:32683-32367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr16:28170421-28170736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
156, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr16:53046299-53045982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr16:8816154-8816473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr16:15566693-15566374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
130, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr16:26663700-26663384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr16:40296226-40296545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
95, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr16:43897322-43897638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 9
               

               
Conread position:
               
20-334
               

               
Cow position:
               
chr16:24105651-24105340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
163, 13
               

               
Conread position:
               
20-334
               

               
Cow position:
               
chr16:47473523-47473206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
91, 10
               

               
Conread position:
               
20-337
               

               
Cow position:
               
chr16:29046970-29046655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
142, 13
               

               
Conread position:
               
26-260
               

               
Cow position:
               
chr16:6943545-6943312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
136, 7
               

               
Conread position:
               
29-334
               

               
Cow position:
               
chr16:25171289-25170988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
122, 17
               

               
Conread position:
               
31-337
               

               
Cow position:
               
chr16:23983247-23982943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
131, 57
               

               
Conread position:
               
33-335
               

               
Cow position:
               
chr16:31832562-31832260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
129, 67
               

               
Conread position:
               
34-319
               

               
Cow position:
               
chr16:15493165-15492879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
113, 70
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr16:5484255-5483952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
128, 70
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr16:14665877-14666180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
128, 70
               

               
Conread position:
               
37-334
               

               
Cow position:
               
chr16:34530253-34529957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
119, 45
               

               
Conread position:
               
37-335
               

               
Cow position:
               
chr16:25188559-25188264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
146, 41
               

               
Conread position:
               
37-335
               

               
Cow position:
               
chr16:41163137-41163431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
125, 49
               

               
Conread position:
               
52-327
               

               
Cow position:
               
chr16:25257853-25257579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
111, 52
               

               
Conread position:
               
55-283
               

               
Cow position:
               
chr16:42739194-42739420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
101, 28
               

               
Conread position:
               
2-335
               

               
Cow position:
               
chr17:11376245-11376578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 32
               

               
Conread position:
               
3-335
               

               
Cow position:
               
chr17:34156660-34156334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
159, 30
               

               
Conread position:
               
3-350
               

               
Cow position:
               
chr17:11026257-11026610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 98
               

               
Conread position:
               
16-337
               

               
Cow position:
               
chr17:6260373-6260054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 20
               

               
Conread position:
               
17-319
               

               
Cow position:
               
chr17:6069079-6068784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-333
               

               
Cow position:
               
chr17:1880625-1880304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
79, 17
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chr17:20087222-20087534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
133, 15
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr17:1382296-1382608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
152, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr17:6120234-6119914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
130, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr17:14216510-14216820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
141, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr17:15142845-15143161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr17:2262626-2262306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr17:8209630-8209310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
156, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr17:14894683-14894364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-341
               

               
Cow position:
               
chr17:13695469-13695786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
146, 16
               

               
Conread position:
               
17-350
               

               
Cow position:
               
chr17:19020097-19019769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
137, 16
               

               
Conread position:
               
26-334
               

               
Cow position:
               
chr17:3708261-3708563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
36, 7
               

               
Conread position:
               
26-351
               

               
Cow position:
               
chr17:38874134-38873812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 12
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr17:2580129-2579825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
112, 70
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr17:23323947-23324250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 73
               

               
Conread position:
               
37-335
               

               
Cow position:
               
chr17:31767535-31767833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 63
               

               
Conread position:
               
37-351
               

               
Cow position:
               
chr17:15156462-15156775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
121, 62
               

               
Conread position:
               
105-318
               

               
Cow position:
               
chr17:18194270-18194054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
45, 36
               

               
Conread position:
               
117-334
               

               
Cow position:
               
chr17:19268935-19269153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
45, 206
               

               
Conread position:
               
123-335
               

               
Cow position:
               
chr17:43952143-43952357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chr18:23798379-23798068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
172, 17
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chr18:29765710-29765394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
139, 16
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chr18:54170799-54171116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
46, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr18:11274375-11274692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr18:24039994-24040318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr18:51462352-51462665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr18:14416716-14416396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr18:16088878-16088564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr18:27837581-27837898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr18:28973153-28973484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr18:41840077-41840406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
95, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr18:51342417-51342098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr18:52651648-52651336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
20-337
               

               
Cow position:
               
chr18:14131121-14130809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
142, 15
               

               
Conread position:
               
26-337
               

               
Cow position:
               
chr18:54271227-54270926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
157, 7
               

               
Conread position:
               
28-335
               

               
Cow position:
               
chr18:55088199-55088510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
134, 79
               

               
Conread position:
               
33-270
               

               
Cow position:
               
chr18:10036125-10036366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
116, 58
               

               
Conread position:
               
34-351
               

               
Cow position:
               
chr18:15856107-15855796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 65
               

               
Conread position:
               
37-335
               

               
Cow position:
               
chr18:51661057-51660761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
125, 51
               

               
Conread position:
               
61-337
               

               
Cow position:
               
chr18:36509027-36508751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
101, 43
               

               
Conread position:
               
8-337
               

               
Cow position:
               
chr19:39391253-39390931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
154, 6
               

               
Conread position:
               
17-283
               

               
Cow position:
               
chr19:27036822-27037082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
134, 16
               

               
Conread position:
               
17-302
               

               
Cow position:
               
chr19:10956493-10956773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
139, 16
               

               
Conread position:
               
17-318
               

               
Cow position:
               
chr19:5900759-5901059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
94, 16
               

               
Conread position:
               
17-322
               

               
Cow position:
               
chr19:12773853-12773551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-328
               

               
Cow position:
               
chr19:7342802-7342492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr19:7489050-7488735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
145, 19
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr19:28580923-28581238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr19:39184803-39185123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
95, 17
               

               
Conread position:
               
17-338
               

               
Cow position:
               
chr19:5729571-5729251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
26-335
               

               
Cow position:
               
chr19:773322-773014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
136, 81
               

               
Conread position:
               
26-338
               

               
Cow position:
               
chr19:40851707-40852016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
86, 7
               

               
Conread position:
               
33-335
               

               
Cow position:
               
chr19:20105433-20105129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
140, 74
               

               
Conread position:
               
33-337
               

               
Cow position:
               
chr19:52151110-52151414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
77, 56
               

               
Conread position:
               
34-334
               

               
Cow position:
               
chr19:25173768-25174062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
117, 59
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr19:438716-439018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
128, 70
               

               
Conread position:
               
37-335
               

               
Cow position:
               
chr19:28593978-28593682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
125, 63
               

               
Conread position:
               
37-335
               

               
Cow position:
               
chr19:43144429-43144134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
121, 62
               

               
Conread position:
               
37-337
               

               
Cow position:
               
chr19:136295-136589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
114, 62
               

               
Conread position:
               
181-335
               

               
Cow position:
               
chr19:5208744-5208590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-335
               

               
Cow position:
               
chr20:823474-823142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
34, 75
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr20:30685036-30684700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
19, 33
               

               
Conread position:
               
4-337
               

               
Cow position:
               
chr20:35125209-35124875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
158, 100
               

               
Conread position:
               
17-262
               

               
Cow position:
               
chr20:12569217-12568973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-319
               

               
Cow position:
               
chr20:8992525-8992826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr20:25961795-25961478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
152, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr20:5535634-5535317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr20:23468968-23469286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-350
               

               
Cow position:
               
chr20:12438065-12438394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
105, 17
               

               
Conread position:
               
26-328
               

               
Cow position:
               
chr20:22697948-22697657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
125, 21
               

               
Conread position:
               
31-334
               

               
Cow position:
               
chr20:15097192-15097494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
131, 73
               

               
Conread position:
               
33-245
               

               
Cow position:
               
chr20:14870268-14870478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
18, 26
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr20:29949182-29948881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
94, 65
               

               
Conread position:
               
37-335
               

               
Cow position:
               
chr20:22716653-22716948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
75, 57
               

               
Conread position:
               
106-320
               

               
Cow position:
               
chr20:38624614-38624404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 13
               

               
Conread position:
               
117-337
               

               
Cow position:
               
chr20:7114885-7115107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
15-257
               

               
Cow position:
               
chr21:26637385-26637625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
147, 18
               

               
Conread position:
               
17-319
               

               
Cow position:
               
chr21:1192569-1192268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-328
               

               
Cow position:
               
chr21:28736047-28735737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
103, 16
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chr21:27070450-27070766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr21:2475730-2476047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr21:11406185-11406502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr21:37046431-37046114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr21:27283203-27282885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
95, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr21:35144571-35144255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr21:40270863-40271182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
20-328
               

               
Cow position:
               
chr21:47941664-47941360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
131, 13
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:2882933-2883250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
141, 11
               

               
Conread position:
               
26-313
               

               
Cow position:
               
chr21:2939809-2940095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
99, 59
               

               
Conread position:
               
26-344
               

               
Cow position:
               
chr21:11506397-11506081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
136, 7
               

               
Conread position:
               
31-343
               

               
Cow position:
               
chr21:23862123-23861812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
119, 63
               

               
Conread position:
               
33-329
               

               
Cow position:
               
chr21:39087801-39087509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
129, 67
               

               
Conread position:
               
33-346
               

               
Cow position:
               
chr21:21915485-21915176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
24, 72
               

               
Conread position:
               
34-341
               

               
Cow position:
               
chr21:2511690-2511383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
128, 73
               

               
Conread position:
               
34-351
               

               
Cow position:
               
chr21:49325106-49324796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
148, 64
               

               
Conread position:
               
37-328
               

               
Cow position:
               
chr21:18819366-18819662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
43-328
               

               
Cow position:
               
chr21:29863-29585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
218, 24
               

               
Conread position:
               
52-351
               

               
Cow position:
               
chr21:1689439-1689741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 48
               

               
Conread position:
               
55-340
               

               
Cow position:
               
chr21:23706898-23706617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 10
               

               
Conread position:
               
72-334
               

               
Cow position:
               
chr21:9892690-9892434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
84, 13
               

               
Conread position:
               
93-335
               

               
Cow position:
               
chr21:26650780-26650535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
168-335
               

               
Cow position:
               
chr21:6340228-6340060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
3-335
               

               
Cow position:
               
chr22:27284683-27284353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 30
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr22:1520363-1520690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
19, 33
               

               
Conread position:
               
17-260
               

               
Cow position:
               
chr22:42989200-42988958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-277
               

               
Cow position:
               
chr22:14630055-14629796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-284
               

               
Cow position:
               
chr22:21589974-21589712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-319
               

               
Cow position:
               
chr22:15313312-15313612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
95, 17
               

               
Conread position:
               
17-326
               

               
Cow position:
               
chr22:27309139-27309447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-333
               

               
Cow position:
               
chr22:18815741-18816056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr22:1879430-1879114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
94, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr22:5232643-5232961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr22:6021299-6020984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
156, 21
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr22:18027918-18027600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr22:20240206-20240521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
152, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr22:17328095-17328414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr22:36860894-36861208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr22:39468884-39469197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr22:42991816-42991497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
95, 17
               

               
Conread position:
               
17-350
               

               
Cow position:
               
chr22:31334398-31334725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-350
               

               
Cow position:
               
chr22:35671718-35672050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
145, 15
               

               
Conread position:
               
28-327
               

               
Cow position:
               
chr22:9277169-9276876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
155, 65
               

               
Conread position:
               
33-333
               

               
Cow position:
               
chr22:15955552-15955846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
118, 61
               

               
Conread position:
               
33-343
               

               
Cow position:
               
chr22:1806488-1806181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
22, 62
               

               
Conread position:
               
37-335
               

               
Cow position:
               
chr22:3277737-3278035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
125, 57
               

               
Conread position:
               
37-335
               

               
Cow position:
               
chr22:10909216-10909512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
125, 70
               

               
Conread position:
               
87-348
               

               
Cow position:
               
chr22:36269806-36269539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
64, 175
               

               
Conread position:
               
94-335
               

               
Cow position:
               
chr22:16814450-16814207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
11-334
               

               
Cow position:
               
chr23:14973913-14974235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
145, 22
               

               
Conread position:
               
17-311
               

               
Cow position:
               
chr23:31649311-31649593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
161, 16
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chr23:15877128-15877438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
13, 88
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr23:23830598-23830287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr23:31447453-31447136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr23:1024373-1024698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
139, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr23:2312605-2312920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
71, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr23:14965107-14965426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr23:20155571-20155890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
20-334
               

               
Cow position:
               
chr23:2341731-2341418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
141, 18
               

               
Conread position:
               
20-337
               

               
Cow position:
               
chr23:4639988-4640298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
92, 14
               

               
Conread position:
               
20-341
               

               
Cow position:
               
chr23:2794596-2794914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
142, 14
               

               
Conread position:
               
25-243
               

               
Cow position:
               
chr23:3861092-3861310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
131, 9
               

               
Conread position:
               
26-223
               

               
Cow position:
               
chr23:16498817-16499012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
135, 7
               

               
Conread position:
               
26-335
               

               
Cow position:
               
chr23:20302830-20302532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
157, 7
               

               
Conread position:
               
28-337
               

               
Cow position:
               
chr23:13510289-13509986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
23, 32
               

               
Conread position:
               
33-349
               

               
Cow position:
               
chr23:14948116-14948428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 66
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr23:966716-967024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
128, 66
               

               
Conread position:
               
35-342
               

               
Cow position:
               
chr23:22943941-22944241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 63
               

               
Conread position:
               
37-335
               

               
Cow position:
               
chr23:19949976-19950266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
125, 45
               

               
Conread position:
               
37-338
               

               
Cow position:
               
chr23:4753215-4752922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
130, 62
               

               
Conread position:
               
52-335
               

               
Cow position:
               
chr23:17785718-17786001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
110, 48
               

               
Conread position:
               
80-337
               

               
Cow position:
               
chr23:11779076-11778814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
161-337
               

               
Cow position:
               
chr23:15526115-15525937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
21, 135
               

               
Conread position:
               
188-338
               

               
Cow position:
               
chr23:2026644-2026794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-311
               

               
Cow position:
               
chr24:38638269-38637979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
154, 13
               

               
Conread position:
               
16-262
               

               
Cow position:
               
chr24:6328588-6328833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
142, 18
               

               
Conread position:
               
17-319
               

               
Cow position:
               
chr24:23505142-23505439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
166, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr24:6084791-6084478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
94, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr24:6646424-6646107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
130, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr24:12484594-12484911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr24:22793900-22793579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
144, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr24:29305598-29305916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
152, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr24:40549589-40549280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
141, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr24:43814487-43814171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr24:147887-148207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr24:17696249-17696566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr24:29188013-29187695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
17-338
               

               
Cow position:
               
chr24:22971817-22971499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr24:4414813-4415118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
26-335
               

               
Cow position:
               
chr24:6024390-6024696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
136, 7
               

               
Conread position:
               
26-335
               

               
Cow position:
               
chr24:44018248-44017940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 7
               

               
Conread position:
               
33-335
               

               
Cow position:
               
chr24:13188879-13188580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
129, 43
               

               
Conread position:
               
34-261
               

               
Cow position:
               
chr24:6059607-6059380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 67
               

               
Conread position:
               
34-346
               

               
Cow position:
               
chr24:12086911-12086602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
128, 70
               

               
Conread position:
               
44-335
               

               
Cow position:
               
chr24:7062092-7061801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 44
               

               
Conread position:
               
51-346
               

               
Cow position:
               
chr24:32846403-32846119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
185, 55
               

               
Conread position:
               
52-337
               

               
Cow position:
               
chr24:14872268-14872553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
85-230
               

               
Cow position:
               
chr24:40121721-40121863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 41
               

               
Conread position:
               
137-334
               

               
Cow position:
               
chr24:7090553-7090757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
160-335
               

               
Cow position:
               
chr24:8030734-8030558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
173-345
               

               
Cow position:
               
chr24:16084086-16084258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-281
               

               
Cow position:
               
chr25:18449956-18449678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
12-335
               

               
Cow position:
               
chr25:20775243-20775557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
161, 21
               

               
Conread position:
               
12-335
               

               
Cow position:
               
chr25:27021887-27022200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
170, 20
               

               
Conread position:
               
12-343
               

               
Cow position:
               
chr25:32580649-32580320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 21
               

               
Conread position:
               
17-290
               

               
Cow position:
               
chr25:20630313-20630045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chr25:11932417-11932731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
139, 76
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chr25:22148223-22147909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr25:6172583-6172266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr25:13550350-13550667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr25:18194420-18194737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
137, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr25:18889331-18889647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-348
               

               
Cow position:
               
chr25:13781717-13781387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 17
               

               
Conread position:
               
20-337
               

               
Cow position:
               
chr25:8675599-8675283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
142, 14
               

               
Conread position:
               
26-345
               

               
Cow position:
               
chr25:17588882-17589203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
86, 7
               

               
Conread position:
               
33-328
               

               
Cow position:
               
chr25:18422694-18422404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
226, 31
               

               
Conread position:
               
34-351
               

               
Cow position:
               
chr25:24216763-24217077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 66
               

               
Conread position:
               
43-337
               

               
Cow position:
               
chr25:24659909-24659621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
119, 60
               

               
Conread position:
               
14-317
               

               
Cow position:
               
chr26:17995890-17996200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 22
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr26:2351661-2351976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr26:3030127-3030444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr26:15144059-15144376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr26:30783444-30783127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
93, 16
               

               
Conread position:
               
17-338
               

               
Cow position:
               
chr26:6848740-6849052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
145, 15
               

               
Conread position:
               
17-341
               

               
Cow position:
               
chr26:8870576-8870260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
156, 16
               

               
Conread position:
               
33-333
               

               
Cow position:
               
chr26:18852906-18852605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
129, 67
               

               
Conread position:
               
33-335
               

               
Cow position:
               
chr26:4805875-4806177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 67
               

               
Conread position:
               
33-335
               

               
Cow position:
               
chr26:12587879-12588181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
140, 74
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr26:30588681-30588984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
128, 70
               

               
Conread position:
               
55-335
               

               
Cow position:
               
chr26:8919512-8919234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
114, 45
               

               
Conread position:
               
115-335
               

               
Cow position:
               
chr26:11253451-11253672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
47, 168
               

               
Conread position:
               
161-333
               

               
Cow position:
               
chr26:18855648-18855474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
3-341
               

               
Cow position:
               
chr27:3643583-3643922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 22
               

               
Conread position:
               
15-246
               

               
Cow position:
               
chr27:25162069-25161840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
113, 60
               

               
Conread position:
               
16-337
               

               
Cow position:
               
chr27:5911507-5911187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
146, 17
               

               
Conread position:
               
17-272
               

               
Cow position:
               
chr27:26377142-26376889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
114, 22
               

               
Conread position:
               
17-327
               

               
Cow position:
               
chr27:26325711-26325402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr27:15541967-15541650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr27:16033756-16034073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr27:14459812-14460131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr27:15637729-15638044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-350
               

               
Cow position:
               
chr27:1209994-1209664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
32-337
               

               
Cow position:
               
chr27:27663574-27663267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 34
               

               
Conread position:
               
34-334
               

               
Cow position:
               
chr27:16612293-16612589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
73, 54
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr27:9992575-9992877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 48
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr27:15046794-15046495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
123, 21
               

               
Conread position:
               
52-319
               

               
Cow position:
               
chr27:15277459-15277725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
99, 48
               

               
Conread position:
               
96-335
               

               
Cow position:
               
chr27:22148637-22148398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
55, 110
               

               
Conread position:
               
98-327
               

               
Cow position:
               
chr27:27499150-27498924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
84, 156
               

               
Conread position:
               
17-222
               

               
Cow position:
               
chr28:14704704-14704905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chr28:1167193-1167509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chr28:5566838-5566518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chr28:5751020-5751332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
145, 15
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr28:2724240-2724557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr28:14751225-14750912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr28:24589536-24589217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
139, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr28:1505555-1505235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr28:5938168-5937846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
140, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr28:12409542-12409858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr28:18519761-18520076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
140, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr28:26425562-26425881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
20-337
               

               
Cow position:
               
chr28:1953811-1953493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 13
               

               
Conread position:
               
26-335
               

               
Cow position:
               
chr28:6538588-6538896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
125, 7
               

               
Conread position:
               
28-345
               

               
Cow position:
               
chr28:6779665-6779981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
134, 75
               

               
Conread position:
               
34-333
               

               
Cow position:
               
chr28:17389155-17388857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
78, 51
               

               
Conread position:
               
36-327
               

               
Cow position:
               
chr28:33259306-33259021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 64
               

               
Conread position:
               
37-350
               

               
Cow position:
               
chr28:22232736-22233049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
121, 62
               

               
Conread position:
               
72-337
               

               
Cow position:
               
chr28:10872829-10872565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 28
               

               
Conread position:
               
80-337
               

               
Cow position:
               
chr28:2084226-2083964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
19, 212
               

               
Conread position:
               
111-335
               

               
Cow position:
               
chr28:484971-485197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
120-337
               

               
Cow position:
               
chr28:29820322-29820104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 19
               

               
Conread position:
               
185-327
               

               
Cow position:
               
chr28:33256723-33256863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
17-233
               

               
Cow position:
               
chr29:32559108-32559322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
141, 16
               

               
Conread position:
               
17-333
               

               
Cow position:
               
chr29:40502329-40502644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chr29:14085480-14085796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
140, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr29:669410-669726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr29:15894202-15894519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr29:15968213-15968530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr29:18856296-18856612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
141, 15
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr29:19885715-19885401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
94, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr29:2100500-2100181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr29:7430569-7430883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr29:7844979-7844660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr29:10647601-10647915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr29:20251813-20251494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
145, 19
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr29:23976489-23976176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr29:25931889-25932207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-350
               

               
Cow position:
               
chr29:19622594-19622925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
20-335
               

               
Cow position:
               
chr29:36597939-36598254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
26-335
               

               
Cow position:
               
chr29:27249704-27250011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 7
               

               
Conread position:
               
27-276
               

               
Cow position:
               
chr29:4057549-4057307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
156, 16
               

               
Conread position:
               
28-319
               

               
Cow position:
               
chr29:802290-802577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 33
               

               
Conread position:
               
28-335
               

               
Cow position:
               
chr29:31182042-31181746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
155, 57
               

               
Conread position:
               
31-290
               

               
Cow position:
               
chr29:251413-251150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
123, 69
               

               
Conread position:
               
33-264
               

               
Cow position:
               
chr29:21264283-21264055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
123, 45
               

               
Conread position:
               
33-319
               

               
Cow position:
               
chr29:32583744-32584029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
122, 26
               

               
Conread position:
               
33-333
               

               
Cow position:
               
chr29:5982078-5982378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
129, 58
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr29:2690539-2690236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
135, 71
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr29:2840745-2841037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
128, 52
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr29:10823337-10823633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
34-351
               

               
Cow position:
               
chr29:3176963-3177267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
122, 50
               

               
Conread position:
               
52-337
               

               
Cow position:
               
chr29:19653736-19653444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
75, 52
               

               
Conread position:
               
97-314
               

               
Cow position:
               
chr29:6213112-6212893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 14
               

               
Conread position:
               
108-335
               

               
Cow position:
               
chr29:16110975-16110747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 187
               

               
Conread position:
               
115-351
               

               
Cow position:
               
chr29:30259986-30260206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
41, 128
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr5:49073733-49074060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
181, 32
               

               
Conread position:
               
3-335
               

               
Cow position:
               
chr5:46664477-46664151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
31, 106
               

               
Conread position:
               
17-209
               

               
Cow position:
               
chr5:4757698-4757890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
126, 15
               

               
Conread position:
               
17-296
               

               
Cow position:
               
chr5:241667-241389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
145, 15
               

               
Conread position:
               
17-302
               

               
Cow position:
               
chr5:32154436-32154712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
17-319
               

               
Cow position:
               
chr5:30579793-30579488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-319
               

               
Cow position:
               
chr5:54792171-54792469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chr5:57482073-57482390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr5:3964912-3964600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
141, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr5:4089536-4089219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
139, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr5:14380607-14380297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr5:18122011-18122320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
166, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr5:23959850-23960167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr5:27908807-27909124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr5:35300564-35300247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr5:44459948-44459631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr5:46776544-46776227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr5:48467815-48468131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr5:24099138-24098820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-338
               

               
Cow position:
               
chr5:37732817-37732498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-346
               

               
Cow position:
               
chr5:46738108-46738435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
26-272
               

               
Cow position:
               
chr5:14784905-14785149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
128, 7
               

               
Conread position:
               
26-318
               

               
Cow position:
               
chr5:18664248-18663957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
136, 7
               

               
Conread position:
               
26-335
               

               
Cow position:
               
chr5:18666450-18666142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 7
               

               
Conread position:
               
30-315
               

               
Cow position:
               
chr5:28023972-28023680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 73
               

               
Conread position:
               
33-296
               

               
Cow position:
               
chr5:2531705-2531447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
129, 51
               

               
Conread position:
               
33-334
               

               
Cow position:
               
chr5:41528308-41528604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
129, 64
               

               
Conread position:
               
33-335
               

               
Cow position:
               
chr5:6588569-6588872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
125, 66
               

               
Conread position:
               
33-335
               

               
Cow position:
               
chr5:10842970-10843271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
122, 43
               

               
Conread position:
               
33-351
               

               
Cow position:
               
chr5:47894087-47894392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 60
               

               
Conread position:
               
34-328
               

               
Cow position:
               
chr5:24589214-24588921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
126, 54
               

               
Conread position:
               
34-333
               

               
Cow position:
               
chr5:48808288-48808578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
128, 66
               

               
Conread position:
               
34-335
               

               
Cow position:
               
chr5:4018750-4019050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
128, 73
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr5:64781562-64781865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
135, 70
               

               
Conread position:
               
34-351
               

               
Cow position:
               
chr5:32309147-32309472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 66
               

               
Conread position:
               
36-334
               

               
Cow position:
               
chr5:55628439-55628142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
76, 57
               

               
Conread position:
               
37-346
               

               
Cow position:
               
chr5:41956891-41957185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
119, 47
               

               
Conread position:
               
43-334
               

               
Cow position:
               
chr5:27002472-27002189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
113, 57
               

               
Conread position:
               
52-313
               

               
Cow position:
               
chr5:26084144-26084403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
110, 52
               

               
Conread position:
               
54-327
               

               
Cow position:
               
chr5:43003525-43003256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
108-335
               

               
Cow position:
               
chr5:26078849-26079072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
75, 37
               

               
Conread position:
               
108-341
               

               
Cow position:
               
chr5:31706952-31706716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
147-335
               

               
Cow position:
               
chr5:24577251-24577063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
36, 165
               

               
Conread position:
               
17-260
               

               
Cow position:
               
chr6:185862-186104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-284
               

               
Cow position:
               
chr6:59918464-59918728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
134, 16
               

               
Conread position:
               
17-311
               

               
Cow position:
               
chr6:7140855-7141149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
141, 15
               

               
Conread position:
               
17-326
               

               
Cow position:
               
chr6:24239664-24239360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
164, 17
               

               
Conread position:
               
17-328
               

               
Cow position:
               
chr6:1411336-1411646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chr6:5949167-5949483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 17
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chr6:12665712-12666022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chr6:52693635-52693321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
139, 17
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr6:10499117-10499434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr6:13104664-13104348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr6:13847633-13847315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
147, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr6:17597684-17597989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr6:24322774-24323091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr6:43618322-43618005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
137, 18
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr6:44149949-44150266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
156, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr6:68027397-68027082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr6:69221603-69221920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr6:1822020-1822338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr6:13944514-13944195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
156, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr6:15279949-15280261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
145, 19
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr6:20560499-20560818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr6:29312105-29311786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr6:35876106-35876421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
140, 17
               

               
Conread position:
               
17-340
               

               
Cow position:
               
chr6:26670261-26670582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
156, 16
               

               
Conread position:
               
17-346
               

               
Cow position:
               
chr6:40866953-40867276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-349
               

               
Cow position:
               
chr6:44905101-44904771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
63, 19
               

               
Conread position:
               
26-283
               

               
Cow position:
               
chr6:14762273-14762517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
130, 6
               

               
Conread position:
               
26-335
               

               
Cow position:
               
chr6:2375299-2374991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
136, 7
               

               
Conread position:
               
26-335
               

               
Cow position:
               
chr6:44032390-44032082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
136, 6
               

               
Conread position:
               
33-334
               

               
Cow position:
               
chr6:65914793-65914493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
34-334
               

               
Cow position:
               
chr6:39050633-39050927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
16, 45
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr6:28275574-28275271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
127, 70
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr6:58027345-58027047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
85, 59
               

               
Conread position:
               
36-349
               

               
Cow position:
               
chr6:12530076-12529768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 15
               

               
Conread position:
               
37-335
               

               
Cow position:
               
chr6:65821534-65821836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
118, 39
               

               
Conread position:
               
43-337
               

               
Cow position:
               
chr6:65842167-65841882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
119, 50
               

               
Conread position:
               
62-351
               

               
Cow position:
               
chr6:33899660-33899943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 38
               

               
Conread position:
               
75-337
               

               
Cow position:
               
chr6:8202293-8202032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
87, 29
               

               
Conread position:
               
97-351
               

               
Cow position:
               
chr6:60168641-60168894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 54
               

               
Conread position:
               
111-337
               

               
Cow position:
               
chr6:25214777-25214549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
169-332
               

               
Cow position:
               
chr6:19337126-19337287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
14, 118
               

               
Conread position:
               
16-333
               

               
Cow position:
               
chr7:58994289-58993979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
131, 16
               

               
Conread position:
               
16-337
               

               
Cow position:
               
chr7:1371947-1372263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
146, 16
               

               
Conread position:
               
17-318
               

               
Cow position:
               
chr7:64241090-64241389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chr7:55537222-55537533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr7:3300459-3300776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr7:6647960-6648276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr7:20798743-20799066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
141, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr7:21320853-21320536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr7:25440207-25439890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
42, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr7:60463846-60463529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr7:60794604-60794922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr7:61559910-61559593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr7:61808929-61808612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr7:14138897-14139216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr7:21126962-21127278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr7:21986105-21985786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr7:27787332-27787005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
139, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr7:33405543-33405857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr7:46901375-46901696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
17-338
               

               
Cow position:
               
chr7:45948452-45948768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
20-283
               

               
Cow position:
               
chr7:39554766-39555024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
106, 13
               

               
Conread position:
               
20-337
               

               
Cow position:
               
chr7:21234319-21234627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
142, 14
               

               
Conread position:
               
21-334
               

               
Cow position:
               
chr7:21929842-21929530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
135, 13
               

               
Conread position:
               
26-209
               

               
Cow position:
               
chr7:33312225-33312406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
132, 7
               

               
Conread position:
               
26-305
               

               
Cow position:
               
chr7:21853143-21853412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
156, 7
               

               
Conread position:
               
26-319
               

               
Cow position:
               
chr7:33351926-33351632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
125, 7
               

               
Conread position:
               
31-350
               

               
Cow position:
               
chr7:62440640-62440950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 10
               

               
Conread position:
               
33-272
               

               
Cow position:
               
chr7:67428622-67428382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
123, 59
               

               
Conread position:
               
33-335
               

               
Cow position:
               
chr7:11447239-11446936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
129, 74
               

               
Conread position:
               
33-335
               

               
Cow position:
               
chr7:65811515-65811227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
121, 37
               

               
Conread position:
               
34-334
               

               
Cow position:
               
chr7:34149786-34149486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
128, 70
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr7:445947-446246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
128, 70
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr7:34486599-34486299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
128, 66
               

               
Conread position:
               
34-349
               

               
Cow position:
               
chr7:7211311-7211616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 60
               

               
Conread position:
               
34-349
               

               
Cow position:
               
chr7:65458481-65458801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 219
               

               
Conread position:
               
37-328
               

               
Cow position:
               
chr7:29369611-29369900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
60, 147
               

               
Conread position:
               
37-333
               

               
Cow position:
               
chr7:23837253-23836953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
57, 140
               

               
Conread position:
               
44-337
               

               
Cow position:
               
chr7:3234016-3234305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
139, 60
               

               
Conread position:
               
51-351
               

               
Cow position:
               
chr7:63950756-63951054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
132, 49
               

               
Conread position:
               
59-300
               

               
Cow position:
               
chr7:68358628-68358387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
123, 41
               

               
Conread position:
               
105-334
               

               
Cow position:
               
chr7:1403990-1404219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 155
               

               
Conread position:
               
105-334
               

               
Cow position:
               
chr7:4415991-4415762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
51, 118
               

               
Conread position:
               
111-337
               

               
Cow position:
               
chr7:67799463-67799235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
133-335
               

               
Cow position:
               
chr7:43830443-43830645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
135-337
               

               
Cow position:
               
chr7:19924236-19924442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
3-335
               

               
Cow position:
               
chr8:9736145-9735814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 30
               

               
Conread position:
               
10-335
               

               
Cow position:
               
chr8:8517689-8518016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
27, 96
               

               
Conread position:
               
15-335
               

               
Cow position:
               
chr8:6064882-6065201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
147, 18
               

               
Conread position:
               
16-271
               

               
Cow position:
               
chr8:13698295-13698549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
94, 17
               

               
Conread position:
               
17-266
               

               
Cow position:
               
chr8:25376645-25376399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-323
               

               
Cow position:
               
chr8:11969398-11969695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
94, 16
               

               
Conread position:
               
17-333
               

               
Cow position:
               
chr8:38391253-38390942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-333
               

               
Cow position:
               
chr8:60061267-60060956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chr8:17311910-17311594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chr8:39195323-39195642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr8:6684331-6684014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr8:8556263-8556581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
152, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr8:15711532-15711849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr8:27579281-27578969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
147, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr8:32437200-32437513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr8:32631143-32631460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
145, 15
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr8:34348558-34348245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr8:37931975-37931658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr8:47068922-47069239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 15
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr8:4687287-4686967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 18
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr8:19051362-19051048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr8:33589260-33588946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
145, 15
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr8:44243683-44244002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr8:49215326-49215006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
17-349
               

               
Cow position:
               
chr8:44107354-44107034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
96, 16
               

               
Conread position:
               
17-350
               

               
Cow position:
               
chr8:10742730-10743072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
111, 17
               

               
Conread position:
               
18-337
               

               
Cow position:
               
chr8:8401231-8401544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
144, 25
               

               
Conread position:
               
20-323
               

               
Cow position:
               
chr8:46051069-46050770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
142, 14
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr8:12449833-12449519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
143, 13
               

               
Conread position:
               
25-243
               

               
Cow position:
               
chr8:8308473-8308256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
131, 9
               

               
Conread position:
               
26-328
               

               
Cow position:
               
chr8:38606323-38606618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
130, 7
               

               
Conread position:
               
26-335
               

               
Cow position:
               
chr8:1153433-1153741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
136, 62
               

               
Conread position:
               
26-335
               

               
Cow position:
               
chr8:1319917-1319611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
62, 7
               

               
Conread position:
               
26-350
               

               
Cow position:
               
chr8:46944032-46944360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
90, 7
               

               
Conread position:
               
33-334
               

               
Cow position:
               
chr8:2886618-2886319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
140, 13
               

               
Conread position:
               
33-335
               

               
Cow position:
               
chr8:22571440-22571743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
128, 74
               

               
Conread position:
               
33-335
               

               
Cow position:
               
chr8:30891447-30891748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
129, 71
               

               
Conread position:
               
35-337
               

               
Cow position:
               
chr8:7161765-7161463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
127, 65
               

               
Conread position:
               
43-335
               

               
Cow position:
               
chr8:9276042-9275749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
115, 56
               

               
Conread position:
               
54-328
               

               
Cow position:
               
chr8:8315600-8315875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
104, 50
               

               
Conread position:
               
111-334
               

               
Cow position:
               
chr8:44694610-44694386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
116-335
               

               
Cow position:
               
chr8:45797527-45797748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
158-328
               

               
Cow position:
               
chr8:51667543-51667714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
159-346
               

               
Cow position:
               
chr8:45168814-45169001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
14, 54
               

               
Conread position:
               
198-334
               

               
Cow position:
               
chr8:45692448-45692584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 26
               

               
Conread position:
               
17-242
               

               
Cow position:
               
chr9:4943276-4943500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-271
               

               
Cow position:
               
chr9:32969487-32969234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-333
               

               
Cow position:
               
chr9:5514959-5514654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
140, 15
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chr9:9646702-9646397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
152, 16
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chr9:16176308-16175994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chr9:28688640-28688327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
134, 16
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chr9:31064969-31064653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr9:1251461-1251775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr9:28678510-28678192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 83
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr9:51211218-51210901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr9:59426306-59425994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr9:22654109-22653790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
95, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr9:37970659-37970987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
74, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr9:42569439-42569124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
165, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr9:47002732-47002413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr9:59173609-59173936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr9:60277479-60277798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 17
               

               
Conread position:
               
19-331
               

               
Cow position:
               
chr9:1980525-1980215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
137, 14
               

               
Conread position:
               
26-313
               

               
Cow position:
               
chr9:2053283-2053009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
120, 7
               

               
Conread position:
               
26-335
               

               
Cow position:
               
chr9:17063860-17064168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
136, 7
               

               
Conread position:
               
28-335
               

               
Cow position:
               
chr9:64017935-64018242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 72
               

               
Conread position:
               
33-334
               

               
Cow position:
               
chr9:53702207-53702498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
150, 66
               

               
Conread position:
               
33-335
               

               
Cow position:
               
chr9:36725023-36724721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 67
               

               
Conread position:
               
33-349
               

               
Cow position:
               
chr9:7016416-7016105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
83, 48
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr9:4533017-4532715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
128, 34
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr9:51181664-51181966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 70
               

               
Conread position:
               
34-343
               

               
Cow position:
               
chr9:9329577-9329883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 48
               

               
Conread position:
               
34-346
               

               
Cow position:
               
chr9:27035203-27034894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
128, 70
               

               
Conread position:
               
36-311
               

               
Cow position:
               
chr9:51757382-51757659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
45, 58
               

               
Conread position:
               
37-251
               

               
Cow position:
               
chr9:14761932-14762141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
125, 39
               

               
Conread position:
               
37-328
               

               
Cow position:
               
chr9:44818694-44818416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
91, 39
               

               
Conread position:
               
37-345
               

               
Cow position:
               
chr9:45873863-45873554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
125, 70
               

               
Conread position:
               
37-350
               

               
Cow position:
               
chr9:3005727-3006040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
145, 70
               

               
Conread position:
               
39-194
               

               
Cow position:
               
chr9:25633491-25633647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
102, 61
               

               
Conread position:
               
43-351
               

               
Cow position:
               
chr9:4650598-4650903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 57
               

               
Conread position:
               
47-335
               

               
Cow position:
               
chr9:1075690-1075978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
115, 60
               

               
Conread position:
               
97-337
               

               
Cow position:
               
chr9:7003249-7003006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
100-335
               

               
Cow position:
               
chr9:49177371-49177608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
110-333
               

               
Cow position:
               
chr9:7061642-7061867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
117-338
               

               
Cow position:
               
chr9:25022858-25023081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
130-335
               

               
Cow position:
               
chr9:25754798-25755004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
135-335
               

               
Cow position:
               
chr9:16268793-16268591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
161-335
               

               
Cow position:
               
chr9:60651318-60651493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
161-345
               

               
Cow position:
               
chr9:25484265-25484078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
184-335
               

               
Cow position:
               
chr9:163133-163284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
16-337
               

               
Cow position:
               
chrX:23040679-23040997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
146, 18
               

               
Conread position:
               
16-337
               

               
Cow position:
               
chrX:29096651-29096331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
17-243
               

               
Cow position:
               
chrX:27624438-27624213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-252
               

               
Cow position:
               
chrX:41411626-41411393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-263
               

               
Cow position:
               
chrX:983104-982859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-313
               

               
Cow position:
               
chrX:6282311-6282598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
165, 15
               

               
Conread position:
               
17-313
               

               
Cow position:
               
chrX:21223368-21223076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
17-315
               

               
Cow position:
               
chrX:506889-507186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-316
               

               
Cow position:
               
chrX:30712031-30711734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-333
               

               
Cow position:
               
chrX:5323283-5323596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
17-333
               

               
Cow position:
               
chrX:21579910-21579603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
17-333
               

               
Cow position:
               
chrX:40246437-40246747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chrX:971217-970901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 17
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chrX:3375670-3375986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chrX:20720432-20720116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chrX:21829973-21829657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chrX:2604490-2604173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chrX:5336044-5336361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chrX:6872631-6872948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
137, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chrX:10531116-10531433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
152, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chrX:13076255-13076572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 15
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chrX:14595213-14594896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 15
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chrX:15178983-15179307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chrX:20315620-20315930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chrX:21340842-21340529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
116, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chrX:27425878-27426195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chrX:28585422-28585105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chrX:29910983-29911300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
156, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chrX:30055293-30055610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chrX:35530304-35529987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chrX:320912-320593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chrX:1547422-1547104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chrX:7094040-7093721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chrX:16362682-16363001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chrX:16699749-16699430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chrX:23277465-23277149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
172, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chrX:23391151-23391469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
34, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chrX:26758161-26758477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
146, 17
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chrX:30011481-30011162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chrX:31198889-31198570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-341
               

               
Cow position:
               
chrX:12287961-12288277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
166, 16
               

               
Conread position:
               
17-341
               

               
Cow position:
               
chrX:21304083-21304407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
17-342
               

               
Cow position:
               
chrX:37849455-37849133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
162, 16
               

               
Conread position:
               
17-350
               

               
Cow position:
               
chrX:39563491-39563821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
26-302
               

               
Cow position:
               
chrX:1834251-1833976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
132, 7
               

               
Conread position:
               
26-335
               

               
Cow position:
               
chrX:7752332-7752025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
132, 7
               

               
Conread position:
               
26-335
               

               
Cow position:
               
chrX:12353673-12353365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 7
               

               
Conread position:
               
26-335
               

               
Cow position:
               
chrX:18219830-18219522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 7
               

               
Conread position:
               
26-335
               

               
Cow position:
               
chrX:37812595-37812286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
136, 7
               

               
Conread position:
               
29-334
               

               
Cow position:
               
chrX:3407386-3407688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
124, 30
               

               
Conread position:
               
29-334
               

               
Cow position:
               
chrX:10416860-10417171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
122, 59
               

               
Conread position:
               
29-337
               

               
Cow position:
               
chrX:13416995-13417298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
117, 16
               

               
Conread position:
               
33-314
               

               
Cow position:
               
chrX:23213926-23214207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
130, 67
               

               
Conread position:
               
33-334
               

               
Cow position:
               
chrX:18534897-18534606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
123, 53
               

               
Conread position:
               
33-335
               

               
Cow position:
               
chrX:5394574-5394876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
152, 71
               

               
Conread position:
               
33-335
               

               
Cow position:
               
chrX:8480077-8479774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
129, 55
               

               
Conread position:
               
33-335
               

               
Cow position:
               
chrX:20359624-20359926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
129, 55
               

               
Conread position:
               
33-335
               

               
Cow position:
               
chrX:26998504-26998209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
152, 9
               

               
Conread position:
               
33-335
               

               
Cow position:
               
chrX:31493845-31493545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
136, 28
               

               
Conread position:
               
34-335
               

               
Cow position:
               
chrX:18659359-18659657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
54, 44
               

               
Conread position:
               
34-350
               

               
Cow position:
               
chrX:28758207-28758531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
94, 70
               

               
Conread position:
               
35-243
               

               
Cow position:
               
chrX:34345663-34345455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 52
               

               
Conread position:
               
37-335
               

               
Cow position:
               
chrX:12279847-12280145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
125, 63
               

               
Conread position:
               
37-335
               

               
Cow position:
               
chrX:22611369-22611072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
125, 63
               

               
Conread position:
               
37-335
               

               
Cow position:
               
chrX:32066739-32067031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
125, 70
               

               
Conread position:
               
43-349
               

               
Cow position:
               
chrX:29885410-29885099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
113, 45
               

               
Conread position:
               
44-294
               

               
Cow position:
               
chrX:34553544-34553296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
107, 190
               

               
Conread position:
               
55-290
               

               
Cow position:
               
chrX:28870773-28871007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
96, 48
               

               
Conread position:
               
55-334
               

               
Cow position:
               
chrX:21490601-21490323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
103, 36
               

               
Conread position:
               
80-335
               

               
Cow position:
               
chrX:15980566-15980825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
105-337
               

               
Cow position:
               
chrX:30183530-30183765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
57, 188
               

               
Conread position:
               
109-334
               

               
Cow position:
               
chrX:13084359-13084598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 112
               

               
Conread position:
               
161-335
               

               
Cow position:
               
chrX:17478222-17478397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
22, 60
               

               
Conread position:
               
168-335
               

               
Cow position:
               
chrX:11433994-11433826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 80
               

               
Conread position:
               
181-335
               

               
Cow position:
               
chrX:29947986-29947832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
181-338
               

               
Cow position:
               
chrX:22488467-22488310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0