Cow genome map
| Conread name: | Pig1-45P13 |
| Conread position: | 70-258 |
| Cow position: | chr1:22078425-22078241 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 43, 18 |
| Conread position: | 78-286 |
| Cow position: | chr1:40097237-40097448 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 36, 10 |
| Conread position: | 69-285 |
| Cow position: | chr10:33682943-33683161 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 87, 19 |
| Conread position: | 89-285 |
| Cow position: | chr10:16824214-16824421 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 70, 19 |
| Conread position: | 89-285 |
| Cow position: | chr10:36755176-36754980 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 24 |
| Conread position: | 58-286 |
| Cow position: | chr11:80161336-80161112 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 97, 30 |
| Conread position: | 89-285 |
| Cow position: | chr11:61948611-61948806 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 76, 31 |
| Conread position: | 179-285 |
| Cow position: | chr11:29824763-29824869 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 63-285 |
| Cow position: | chr13:8338413-8338644 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 52, 32 |
| Conread position: | 149-285 |
| Cow position: | chr13:14782633-14782769 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 195-285 |
| Cow position: | chr13:58392545-58392456 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 90-294 |
| Cow position: | chr14:48212735-48212945 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 70-285 |
| Cow position: | chr15:17841757-17841538 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 79, 18 |
| Conread position: | 102-285 |
| Cow position: | chr15:20772951-20773138 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 57, 26 |
| Conread position: | 70-285 |
| Cow position: | chr16:18457830-18457607 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 39, 18 |
| Conread position: | 91-285 |
| Cow position: | chr16:7129194-7129002 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 127-285 |
| Cow position: | chr16:21508411-21508254 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 164-269 |
| Cow position: | chr17:32196709-32196815 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 166-285 |
| Cow position: | chr17:7463270-7463389 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 168-294 |
| Cow position: | chr17:35935225-35935098 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 115-286 |
| Cow position: | chr18:47294351-47294527 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 131-285 |
| Cow position: | chr18:41207656-41207497 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 70-300 |
| Cow position: | chr19:55686835-55687062 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 43, 18 |
| Conread position: | 89-285 |
| Cow position: | chr19:13645620-13645412 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 92-285 |
| Cow position: | chr2:53559368-53559556 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 149-285 |
| Cow position: | chr2:10127898-10127762 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 151-285 |
| Cow position: | chr2:63417719-63417591 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 7, 63 |
| Conread position: | 69-285 |
| Cow position: | chr20:28303317-28303528 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 96, 19 |
| Conread position: | 70-285 |
| Cow position: | chr20:29114982-29114762 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 86, 18 |
| Conread position: | 89-285 |
| Cow position: | chr20:16939482-16939684 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 56, 23 |
| Conread position: | 113-285 |
| Cow position: | chr20:34603594-34603427 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 164-284 |
| Cow position: | chr20:26244611-26244491 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 93-286 |
| Cow position: | chr21:45907898-45908095 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 129-285 |
| Cow position: | chr21:38054215-38054376 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 69-283 |
| Cow position: | chr22:38942718-38942499 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 87, 19 |
| Conread position: | 93-285 |
| Cow position: | chr22:20634833-20634636 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 155 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 113-285 |
| Cow position: | chr22:19036588-19036764 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 144 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 70-285 |
| Cow position: | chr23:25704534-25704335 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 174-285 |
| Cow position: | chr23:19168972-19169083 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-285 |
| Cow position: | chr24:22314581-22314716 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 59-286 |
| Cow position: | chr25:15030896-15031139 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 74, 29 |
| Conread position: | 89-281 |
| Cow position: | chr25:9263630-9263437 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 70, 24 |
| Conread position: | 94-285 |
| Cow position: | chr25:29149722-29149528 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 19, 146 |
| Conread position: | 114-271 |
| Cow position: | chr25:6685308-6685143 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 42, 132 |
| Conread position: | 129-285 |
| Cow position: | chr25:1971700-1971857 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 89-257 |
| Cow position: | chr26:8349040-8349206 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 81, 23 |
| Conread position: | 89-285 |
| Cow position: | chr26:3498205-3498006 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 34, 24 |
| Conread position: | 102-286 |
| Cow position: | chr26:1903390-1903197 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 70-285 |
| Cow position: | chr27:22054702-22054488 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 30, 18 |
| Conread position: | 175-277 |
| Cow position: | chr27:24272470-24272572 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 83 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 70-285 |
| Cow position: | chr28:17147232-17147024 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 113-242 |
| Cow position: | chr28:12955204-12955071 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 114-285 |
| Cow position: | chr28:10186586-10186765 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 73 |
| Conread position: | 129-285 |
| Cow position: | chr28:6647541-6647388 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 85, 20 |
| Conread position: | 164-285 |
| Cow position: | chr28:20035837-20035716 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 178-285 |
| Cow position: | chr28:21830627-21830732 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 89-285 |
| Cow position: | chr29:22555574-22555369 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 15, 184 |
| Conread position: | 102-285 |
| Cow position: | chr29:36742531-36742718 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 70-285 |
| Cow position: | chr3:75615034-75614813 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 55, 18 |
| Conread position: | 90-285 |
| Cow position: | chr3:77769199-77769397 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 11, 24 |
| Conread position: | 128-285 |
| Cow position: | chr3:36493932-36493765 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 70-285 |
| Cow position: | chr4:3530209-3530420 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 102-285 |
| Cow position: | chr4:44682175-44682360 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 104-285 |
| Cow position: | chr4:53159762-53159589 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 114-285 |
| Cow position: | chr4:37744570-37744390 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 166-285 |
| Cow position: | chr4:8125560-8125679 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 70-285 |
| Cow position: | chr5:45214256-45214480 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 23, 18 |
| Conread position: | 70-285 |
| Cow position: | chr6:55723073-55723284 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 165 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 70-284 |
| Cow position: | chr7:62372846-62373064 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 61, 18 |
| Conread position: | 91-286 |
| Cow position: | chr8:36998816-36999029 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 102-285 |
| Cow position: | chr8:5810815-5811002 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 21-285 |
| Cow position: | chr9:14387840-14387574 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 29, 70 |
| Conread position: | 56-286 |
| Cow position: | chr9:37265004-37265227 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 37, 59 |
| Conread position: | 90-284 |
| Cow position: | chr9:51312991-51312791 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 65, 141 |
| Conread position: | 165-286 |
| Cow position: | chr9:25400071-25399950 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 70-300 |
| Cow position: | chrX:147259-147491 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 86, 18 |
| Conread position: | 89-281 |
| Cow position: | chrX:10809381-10809582 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 102-285 |
| Cow position: | chrX:21882037-21881852 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 56, 0 |