Cow genome map
| Conread name: | Pig1-70F08 |
| Conread position: | 241-527 |
| Cow position: | chr10:21076107-21075811 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 34, 41 |
| Conread position: | 241-547 |
| Cow position: | chr10:39881528-39881856 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 282-553 |
| Cow position: | chr10:6261573-6261855 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 14, 10 |
| Conread position: | 286-553 |
| Cow position: | chr10:24314128-24314392 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 136, 61 |
| Conread position: | 87-548 |
| Cow position: | chr11:9416093-9416581 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 79 |
| Conread position: | 241-528 |
| Cow position: | chr11:10218171-10218477 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 241-542 |
| Cow position: | chr11:30186484-30186163 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 245-553 |
| Cow position: | chr11:38005940-38006271 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 240 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 30, 173 |
| Conread position: | 13-244 |
| Cow position: | chr13:31560925-31560696 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 42 |
| Conread position: | 241-525 |
| Cow position: | chr13:22186267-22186570 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 33, 287 |
| Conread position: | 241-552 |
| Cow position: | chr13:34048096-34047766 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 241-553 |
| Cow position: | chr13:21130741-21130411 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 36, 277 |
| Conread position: | 268-489 |
| Cow position: | chr14:39722869-39723105 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 13, 150 |
| Conread position: | 282-553 |
| Cow position: | chr14:30707406-30707682 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 67, 93 |
| Conread position: | 253-552 |
| Cow position: | chr15:32286592-32286286 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 19, 98 |
| Conread position: | 233-548 |
| Cow position: | chr16:14669280-14668953 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 40, 118 |
| Conread position: | 281-549 |
| Cow position: | chr16:28438841-28439114 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 69, 181 |
| Conread position: | 296-547 |
| Cow position: | chr16:25293275-25293019 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 136, 58 |
| Conread position: | 300-548 |
| Cow position: | chr16:23872642-23872888 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 37, 77 |
| Conread position: | 301-482 |
| Cow position: | chr16:10770330-10770140 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 151 |
| Conread position: | 295-430 |
| Cow position: | chr17:13894022-13894160 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 241-535 |
| Cow position: | chr18:46878208-46878512 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 34, 174 |
| Conread position: | 241-548 |
| Cow position: | chr18:9186999-9187327 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 270-395 |
| Cow position: | chr18:16394130-16394263 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 121-553 |
| Cow position: | chr19:42299637-42300080 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 292 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 88, 8 |
| Conread position: | 241-533 |
| Cow position: | chr19:20111457-20111770 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 208 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 33, 166 |
| Conread position: | 241-537 |
| Cow position: | chr19:7405663-7405964 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 34, 159 |
| Conread position: | 241-537 |
| Cow position: | chr19:7450230-7450540 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 232 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 34, 41 |
| Conread position: | 311-552 |
| Cow position: | chr2:4274837-4275090 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 38, 10 |
| Conread position: | 241-546 |
| Cow position: | chr20:18328559-18328877 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 34, 106 |
| Conread position: | 241-553 |
| Cow position: | chr21:993180-993512 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 271-548 |
| Cow position: | chr21:34002480-34002775 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 241-546 |
| Cow position: | chr22:10964853-10964538 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 31, 41 |
| Conread position: | 241-548 |
| Cow position: | chr22:293486-293802 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 42, 261 |
| Conread position: | 282-554 |
| Cow position: | chr22:35943772-35944054 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 70, 224 |
| Conread position: | 270-553 |
| Cow position: | chr23:1322201-1322495 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 79, 11 |
| Conread position: | 363-553 |
| Cow position: | chr23:6214278-6214079 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 33, 44 |
| Conread position: | 207-475 |
| Cow position: | chr24:6048045-6047758 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 119 |
| Conread position: | 241-548 |
| Cow position: | chr24:14873586-14873909 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 34, 91 |
| Conread position: | 255-475 |
| Cow position: | chr25:3379013-3379245 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 20, 156 |
| Conread position: | 241-535 |
| Cow position: | chr26:6489292-6489609 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 223 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 241-373 |
| Cow position: | chr27:6013081-6012945 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 241-553 |
| Cow position: | chr28:10591656-10591978 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 27, 37 |
| Conread position: | 242-553 |
| Cow position: | chr28:29437424-29437751 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 264 |
| Conread position: | 282-548 |
| Cow position: | chr29:16017496-16017775 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 241-539 |
| Cow position: | chr3:60387975-60387660 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 33, 144 |
| Conread position: | 285-552 |
| Cow position: | chr3:37624284-37624010 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 66, 24 |
| Conread position: | 42-347 |
| Cow position: | chr4:24198530-24198856 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 11, 55 |
| Conread position: | 353-535 |
| Cow position: | chr4:970097-970285 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 78, 9 |
| Conread position: | 241-552 |
| Cow position: | chr5:58056237-58056562 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 13, 228 |
| Conread position: | 241-535 |
| Cow position: | chr6:35433184-35432877 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 12, 216 |
| Conread position: | 241-553 |
| Cow position: | chr6:59478577-59478912 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 33, 10 |
| Conread position: | 253-553 |
| Cow position: | chr6:39161839-39161524 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 283-526 |
| Cow position: | chr6:10629175-10628917 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 286-553 |
| Cow position: | chr6:6542333-6542075 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 211-553 |
| Cow position: | chr7:30119777-30120132 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 23, 286 |
| Conread position: | 241-548 |
| Cow position: | chr7:41876749-41877073 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 31, 101 |
| Conread position: | 245-553 |
| Cow position: | chr7:68895040-68894728 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 228 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 38, 138 |
| Conread position: | 271-503 |
| Cow position: | chr7:42299164-42299413 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 14, 141 |
| Conread position: | 272-553 |
| Cow position: | chr7:67811327-67811034 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 241-533 |
| Cow position: | chr8:38579379-38579690 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 34, 95 |
| Conread position: | 241-553 |
| Cow position: | chr8:39160233-39159898 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 34, 296 |
| Conread position: | 254-528 |
| Cow position: | chr8:24876810-24877075 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 81, 21 |
| Conread position: | 233-393 |
| Cow position: | chr9:23409799-23409630 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 241-478 |
| Cow position: | chr9:29327605-29327358 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 34, 122 |
| Conread position: | 241-553 |
| Cow position: | chr9:59510170-59509846 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 34, 144 |
| Conread position: | 281-554 |
| Cow position: | chr9:54994822-54994535 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 358-553 |
| Cow position: | chr9:64158532-64158325 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 38, 49 |
| Conread position: | 255-549 |
| Cow position: | chrX:29798680-29798992 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 19, 103 |
| Conread position: | 256-553 |
| Cow position: | chrX:6251177-6251488 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 27, 10 |
| Conread position: | 295-556 |
| Cow position: | chrX:41889958-41890230 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 46, 31 |
| Conread position: | 326-552 |
| Cow position: | chrX:28876170-28876411 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 26, 0 |