Non-Coding RNA Search

Cow genome map


           Conread name:
           Pig1-92A03
        

               Conread position:
               312-531
               

               Cow position:
               chr1:62732472-62732700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               16, 32
               

               Conread position:
               312-532
               

               Cow position:
               chr1:18414557-18414336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               84, 18
               

               Conread position:
               312-537
               

               Cow position:
               chr1:45638384-45638620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 145
               

               Conread position:
               313-537
               

               Cow position:
               chr1:75998560-75998332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               89, 25
               

               Conread position:
               313-537
               

               Cow position:
               chr1:80764641-80764399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               314-537
               

               Cow position:
               chr1:49131216-49130995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               91, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr1:74947222-74946982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               68, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr1:75347521-75347761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               74, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr1:89548090-89548323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               49, 16
               

               Conread position:
               315-537
               

               Cow position:
               chr1:56643690-56643468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               5, 17
               

               Conread position:
               319-535
               

               Cow position:
               chr1:47117359-47117149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               79, 11
               

               Conread position:
               319-537
               

               Cow position:
               chr1:13195515-13195297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               92, 11
               

               Conread position:
               321-535
               

               Cow position:
               chr1:31871330-31871564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               64, 182
               

               Conread position:
               324-524
               

               Cow position:
               chr1:67407271-67407080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               324-537
               

               Cow position:
               chr1:22910280-22910490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               8, 26
               

               Conread position:
               324-537
               

               Cow position:
               chr1:46205727-46205947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               74, 23
               

               Conread position:
               325-504
               

               Cow position:
               chr1:46311042-46311232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               325-530
               

               Cow position:
               chr1:101771814-101772029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               65, 27
               

               Conread position:
               327-524
               

               Cow position:
               chr1:73363759-73363564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               17, 37
               

               Conread position:
               327-537
               

               Cow position:
               chr1:44746775-44746996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               61, 175
               

               Conread position:
               329-537
               

               Cow position:
               chr1:28678433-28678659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               57, 35
               

               Conread position:
               330-522
               

               Cow position:
               chr1:56073545-56073353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               67, 8
               

               Conread position:
               330-537
               

               Cow position:
               chr1:69415798-69415574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               71, 8
               

               Conread position:
               331-537
               

               Cow position:
               chr1:5102564-5102356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               83, 30
               

               Conread position:
               333-522
               

               Cow position:
               chr1:4239434-4239628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               53, 114
               

               Conread position:
               333-524
               

               Cow position:
               chr1:97619920-97619733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               57, 80
               

               Conread position:
               333-536
               

               Cow position:
               chr1:25184052-25184246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               333-537
               

               Cow position:
               chr1:31190192-31189977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               51, 169
               

               Conread position:
               333-537
               

               Cow position:
               chr1:95765173-95764957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               51, 177
               

               Conread position:
               333-537
               

               Cow position:
               chr1:97622291-97622084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               334-528
               

               Cow position:
               chr1:96339669-96339865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               52, 24
               

               Conread position:
               334-537
               

               Cow position:
               chr1:6734382-6734587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               53, 161
               

               Conread position:
               338-505
               

               Cow position:
               chr1:80856262-80856428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               59, 107
               

               Conread position:
               364-522
               

               Cow position:
               chr1:22488773-22488934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               33, 124
               

               Conread position:
               380-532
               

               Cow position:
               chr1:50634280-50634129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               380-533
               

               Cow position:
               chr1:90413357-90413507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               18, 84
               

               Conread position:
               380-537
               

               Cow position:
               chr1:5347037-5347195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               17, 121
               

               Conread position:
               380-537
               

               Cow position:
               chr1:76170179-76170338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               381-510
               

               Cow position:
               chr1:4451295-4451165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               381-532
               

               Cow position:
               chr1:54289216-54289060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               17, 5
               

               Conread position:
               381-537
               

               Cow position:
               chr1:2997925-2998086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               16, 5
               

               Conread position:
               381-537
               

               Cow position:
               chr1:3657386-3657230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               17, 137
               

               Conread position:
               381-537
               

               Cow position:
               chr1:35843951-35843790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               381-537
               

               Cow position:
               chr1:45479609-45479455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               381-537
               

               Cow position:
               chr1:89443503-89443343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               16, 148
               

               Conread position:
               382-537
               

               Cow position:
               chr1:54216993-54217152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               15, 104
               

               Conread position:
               383-518
               

               Cow position:
               chr1:30413574-30413708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               383-524
               

               Cow position:
               chr1:72542138-72541997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               36, 64
               

               Conread position:
               383-531
               

               Cow position:
               chr1:50045780-50045931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               383-531
               

               Cow position:
               chr1:94526479-94526627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               15, 58
               

               Conread position:
               383-532
               

               Cow position:
               chr1:70533958-70533807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               14, 31
               

               Conread position:
               383-535
               

               Cow position:
               chr1:38205451-38205609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               383-535
               

               Cow position:
               chr1:45925018-45925174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               15, 31
               

               Conread position:
               383-537
               

               Cow position:
               chr1:75183769-75183615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               14, 31
               

               Conread position:
               383-537
               

               Cow position:
               chr1:85411558-85411714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               386-532
               

               Cow position:
               chr1:73900989-73901135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               11, 66
               

               Conread position:
               387-533
               

               Cow position:
               chr1:29657806-29657949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               10, 112
               

               Conread position:
               387-534
               

               Cow position:
               chr1:58825526-58825673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               10, 138
               

               Conread position:
               388-515
               

               Cow position:
               chr1:6794939-6794811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               388-518
               

               Cow position:
               chr1:62713967-62713838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               12, 80
               

               Conread position:
               388-521
               

               Cow position:
               chr1:2765396-2765534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               388-532
               

               Cow position:
               chr1:46006223-46006073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               388-532
               

               Cow position:
               chr1:51904351-51904209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               10, 101
               

               Conread position:
               388-532
               

               Cow position:
               chr1:71136135-71136283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               8, 134
               

               Conread position:
               388-532
               

               Cow position:
               chr1:73653656-73653513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 122
               

               Conread position:
               388-535
               

               Cow position:
               chr1:50345528-50345680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               388-535
               

               Cow position:
               chr1:61737080-61737230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr1:5278428-5278278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr1:8192747-8192599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               9, 120
               

               Conread position:
               388-537
               

               Cow position:
               chr1:22777561-22777407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr1:26688489-26688336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               8, 81
               

               Conread position:
               388-537
               

               Cow position:
               chr1:69004380-69004527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               15, 105
               

               Conread position:
               388-537
               

               Cow position:
               chr1:80973621-80973472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               10, 112
               

               Conread position:
               388-537
               

               Cow position:
               chr1:97603650-97603503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               389-531
               

               Cow position:
               chr1:95467347-95467208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               389-537
               

               Cow position:
               chr1:3289156-3289010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               8, 104
               

               Conread position:
               389-537
               

               Cow position:
               chr1:48083712-48083864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               8, 105
               

               Conread position:
               390-505
               

               Cow position:
               chr1:57782992-57783109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               390-537
               

               Cow position:
               chr1:26424775-26424628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               7, 35
               

               Conread position:
               392-537
               

               Cow position:
               chr1:36614099-36613953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               392-537
               

               Cow position:
               chr1:44511547-44511397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               393-531
               

               Cow position:
               chr1:39121848-39121706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               393-537
               

               Cow position:
               chr1:29916407-29916548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               394-537
               

               Cow position:
               chr1:53920580-53920723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               395-532
               

               Cow position:
               chr1:45310281-45310145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               396-532
               

               Cow position:
               chr1:20581935-20582074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               46, 120
               

               Conread position:
               396-537
               

               Cow position:
               chr1:70416121-70416264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               43, 92
               

               Conread position:
               396-537
               

               Cow position:
               chr1:71782671-71782531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               11, 18
               

               Conread position:
               396-537
               

               Cow position:
               chr1:90423089-90422946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               397-537
               

               Cow position:
               chr1:70236269-70236130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               91, 59
               

               Conread position:
               398-528
               

               Cow position:
               chr1:5162051-5161926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               398-537
               

               Cow position:
               chr1:41735627-41735484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               14, 124
               

               Conread position:
               399-537
               

               Cow position:
               chr1:6130738-6130602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               36, 119
               

               Conread position:
               404-537
               

               Cow position:
               chr1:80384764-80384627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               413-497
               

               Cow position:
               chr1:44011825-44011909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               85
               

               Alignm identity:
               76
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               413-521
               

               Cow position:
               chr1:80897886-80897777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               94, 32
               

               Conread position:
               413-535
               

               Cow position:
               chr1:4788546-4788668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               416-535
               

               Cow position:
               chr1:89007735-89007615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               80, 30
               

               Conread position:
               419-523
               

               Cow position:
               chr1:16972480-16972371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               429-533
               

               Cow position:
               chr1:27813405-27813304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               432-537
               

               Cow position:
               chr1:92981309-92981414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               440-537
               

               Cow position:
               chr1:87149067-87149169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               446-536
               

               Cow position:
               chr1:63364674-63364763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               82
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               447-536
               

               Cow position:
               chr1:75224961-75225050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               80
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               311-522
               

               Cow position:
               chr10:6915142-6914936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               25, 8
               

               Conread position:
               311-524
               

               Cow position:
               chr10:65791695-65791907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               36, 135
               

               Conread position:
               312-532
               

               Cow position:
               chr10:38449430-38449211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               126, 81
               

               Conread position:
               313-537
               

               Cow position:
               chr10:10124211-10124450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               9, 46
               

               Conread position:
               314-524
               

               Cow position:
               chr10:25978409-25978200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               120, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr10:8760267-8760057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               314-537
               

               Cow position:
               chr10:9341863-9341629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               67, 17
               

               Conread position:
               314-537
               

               Cow position:
               chr10:59153783-59153553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               70, 16
               

               Conread position:
               319-522
               

               Cow position:
               chr10:16432427-16432227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               78, 11
               

               Conread position:
               319-523
               

               Cow position:
               chr10:48135491-48135294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               319-529
               

               Cow position:
               chr10:30753072-30753272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               78, 11
               

               Conread position:
               324-501
               

               Cow position:
               chr10:22977785-22977609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               73, 144
               

               Conread position:
               324-504
               

               Cow position:
               chr10:25293675-25293861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               325-524
               

               Cow position:
               chr10:10753178-10752973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               38, 134
               

               Conread position:
               329-530
               

               Cow position:
               chr10:16650028-16649829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               186, 67
               

               Conread position:
               330-521
               

               Cow position:
               chr10:46491154-46490971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               330-524
               

               Cow position:
               chr10:50603091-50602892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               54, 8
               

               Conread position:
               330-524
               

               Cow position:
               chr10:53821030-53820832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               56, 8
               

               Conread position:
               330-532
               

               Cow position:
               chr10:27576350-27576557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               61, 8
               

               Conread position:
               330-534
               

               Cow position:
               chr10:41985004-41984783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               54, 8
               

               Conread position:
               332-530
               

               Cow position:
               chr10:21424791-21424579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               333-531
               

               Cow position:
               chr10:8077260-8077060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               111, 64
               

               Conread position:
               333-537
               

               Cow position:
               chr10:33002355-33002151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               155, 65
               

               Conread position:
               333-537
               

               Cow position:
               chr10:48255337-48255117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               334-505
               

               Cow position:
               chr10:23135213-23135386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               334-537
               

               Cow position:
               chr10:58607997-58608209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               346-524
               

               Cow position:
               chr10:54559456-54559639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               46, 109
               

               Conread position:
               380-537
               

               Cow position:
               chr10:6490817-6490657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               57, 6
               

               Conread position:
               381-537
               

               Cow position:
               chr10:31368786-31368626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               17, 156
               

               Conread position:
               382-537
               

               Cow position:
               chr10:19126956-19126806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               383-531
               

               Cow position:
               chr10:49624716-49624868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               383-532
               

               Cow position:
               chr10:6038386-6038237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               14, 76
               

               Conread position:
               383-532
               

               Cow position:
               chr10:30450114-30449961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               383-534
               

               Cow position:
               chr10:15874126-15873971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               14, 38
               

               Conread position:
               386-535
               

               Cow position:
               chr10:51878094-51878241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               11, 50
               

               Conread position:
               387-532
               

               Cow position:
               chr10:9794707-9794559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               51, 27
               

               Conread position:
               388-505
               

               Cow position:
               chr10:42139798-42139681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               388-522
               

               Cow position:
               chr10:25971049-25971184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 59
               

               Conread position:
               388-534
               

               Cow position:
               chr10:65072163-65072012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               388-535
               

               Cow position:
               chr10:9530030-9529884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               9, 36
               

               Conread position:
               388-537
               

               Cow position:
               chr10:6921678-6921825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr10:8413097-8412944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr10:11032538-11032393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               10, 91
               

               Conread position:
               388-537
               

               Cow position:
               chr10:20109988-20109843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               9, 33
               

               Conread position:
               388-537
               

               Cow position:
               chr10:23404156-23404307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               10, 30
               

               Conread position:
               388-537
               

               Cow position:
               chr10:53762161-53762014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               9, 101
               

               Conread position:
               389-535
               

               Cow position:
               chr10:62325571-62325715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               389-537
               

               Cow position:
               chr10:31250777-31250632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               390-537
               

               Cow position:
               chr10:19817819-19817965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               7, 42
               

               Conread position:
               393-537
               

               Cow position:
               chr10:68251776-68251919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr10:23948957-23948812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr10:24786070-24786215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               41, 85
               

               Conread position:
               396-537
               

               Cow position:
               chr10:29689370-29689226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               47, 134
               

               Conread position:
               397-532
               

               Cow position:
               chr10:62516845-62516984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               397-536
               

               Cow position:
               chr10:68566146-68566285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               398-532
               

               Cow position:
               chr10:11404172-11404036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               44, 69
               

               Conread position:
               399-535
               

               Cow position:
               chr10:38429580-38429445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               399-537
               

               Cow position:
               chr10:2407166-2407023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               399-537
               

               Cow position:
               chr10:6568202-6568336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               401-537
               

               Cow position:
               chr10:22479755-22479620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               411-532
               

               Cow position:
               chr10:45299792-45299913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               415-531
               

               Cow position:
               chr10:35306994-35306880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               419-535
               

               Cow position:
               chr10:1070160-1070040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               420-537
               

               Cow position:
               chr10:45614119-45614004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               426-537
               

               Cow position:
               chr10:61426743-61426628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               427-537
               

               Cow position:
               chr10:2267050-2266940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               8, 96
               

               Conread position:
               432-537
               

               Cow position:
               chr10:61113190-61113296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               434-537
               

               Cow position:
               chr10:52889231-52889128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               440-537
               

               Cow position:
               chr10:21712710-21712807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               82
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               311-537
               

               Cow position:
               chr11:75255298-75255517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               20, 8
               

               Conread position:
               312-528
               

               Cow position:
               chr11:43526256-43526024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               76, 165
               

               Conread position:
               312-532
               

               Cow position:
               chr11:14941719-14941502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               26, 50
               

               Conread position:
               313-537
               

               Cow position:
               chr11:42519614-42519846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               182
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               71, 17
               

               Conread position:
               314-502
               

               Cow position:
               chr11:41104448-41104259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               67, 16
               

               Conread position:
               314-519
               

               Cow position:
               chr11:25331864-25331649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               74, 16
               

               Conread position:
               314-532
               

               Cow position:
               chr11:20491447-20491676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               93, 16
               

               Conread position:
               314-535
               

               Cow position:
               chr11:48650671-48650897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               81, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr11:19238280-19238052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               68, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr11:51745231-51745460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               74, 16
               

               Conread position:
               316-537
               

               Cow position:
               chr11:53262656-53262875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               16, 33
               

               Conread position:
               317-537
               

               Cow position:
               chr11:45889839-45890072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               319-523
               

               Cow position:
               chr11:46473800-46473595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               63, 11
               

               Conread position:
               319-535
               

               Cow position:
               chr11:24967334-24967552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               62, 11
               

               Conread position:
               319-537
               

               Cow position:
               chr11:65988110-65988337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               69, 11
               

               Conread position:
               321-537
               

               Cow position:
               chr11:19269193-19268978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               59, 130
               

               Conread position:
               321-537
               

               Cow position:
               chr11:81518280-81518063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               323-522
               

               Cow position:
               chr11:17964070-17963870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               86, 15
               

               Conread position:
               324-537
               

               Cow position:
               chr11:47566056-47565824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               326-503
               

               Cow position:
               chr11:46001785-46001611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               326-537
               

               Cow position:
               chr11:4609949-4609739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               9, 177
               

               Conread position:
               327-537
               

               Cow position:
               chr11:29802686-29802478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               14, 31
               

               Conread position:
               327-537
               

               Cow position:
               chr11:52832830-52832608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               327-537
               

               Cow position:
               chr11:70399746-70399953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               17, 135
               

               Conread position:
               328-537
               

               Cow position:
               chr11:1668564-1668779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               60, 182
               

               Conread position:
               330-524
               

               Cow position:
               chr11:47903743-47903943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               56, 120
               

               Conread position:
               333-532
               

               Cow position:
               chr11:2394171-2393981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               23, 55
               

               Conread position:
               333-532
               

               Cow position:
               chr11:21136705-21136922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               333-537
               

               Cow position:
               chr11:38667924-38667712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               14, 10
               

               Conread position:
               333-537
               

               Cow position:
               chr11:46705636-46705427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               51, 95
               

               Conread position:
               334-535
               

               Cow position:
               chr11:23047852-23047653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               156
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               334-537
               

               Cow position:
               chr11:37372202-37372424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               335-534
               

               Cow position:
               chr11:63157014-63156812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               65, 177
               

               Conread position:
               335-534
               

               Cow position:
               chr11:63508320-63508521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               15, 80
               

               Conread position:
               336-498
               

               Cow position:
               chr11:68422968-68423137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               52, 138
               

               Conread position:
               338-524
               

               Cow position:
               chr11:33316744-33316555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 112
               

               Conread position:
               340-519
               

               Cow position:
               chr11:47169105-47168921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               44, 105
               

               Conread position:
               342-535
               

               Cow position:
               chr11:73499279-73499084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               348-522
               

               Cow position:
               chr11:57831640-57831465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               42, 59
               

               Conread position:
               361-537
               

               Cow position:
               chr11:72035288-72035472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               364-537
               

               Cow position:
               chr11:31422666-31422844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               380-532
               

               Cow position:
               chr11:17452189-17452341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               18, 6
               

               Conread position:
               381-527
               

               Cow position:
               chr11:21473163-21473020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               17, 35
               

               Conread position:
               381-536
               

               Cow position:
               chr11:72082661-72082816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               381-537
               

               Cow position:
               chr11:27681453-27681614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               382-533
               

               Cow position:
               chr11:2484561-2484409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               15, 39
               

               Conread position:
               383-505
               

               Cow position:
               chr11:31575956-31576080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               383-525
               

               Cow position:
               chr11:2908723-2908866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               8, 57
               

               Conread position:
               383-526
               

               Cow position:
               chr11:1596499-1596356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               15, 31
               

               Conread position:
               383-532
               

               Cow position:
               chr11:8828674-8828524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               383-537
               

               Cow position:
               chr11:12949989-12949836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               15, 106
               

               Conread position:
               383-537
               

               Cow position:
               chr11:31894231-31894385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               383-537
               

               Cow position:
               chr11:38845307-38845152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               53, 109
               

               Conread position:
               386-525
               

               Cow position:
               chr11:69824251-69824113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               386-537
               

               Cow position:
               chr11:9874277-9874426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               11, 103
               

               Conread position:
               386-537
               

               Cow position:
               chr11:16000886-16001039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               388-536
               

               Cow position:
               chr11:56892780-56892928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               9, 122
               

               Conread position:
               388-536
               

               Cow position:
               chr11:76392057-76391909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               9, 20
               

               Conread position:
               388-537
               

               Cow position:
               chr11:34946112-34945958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr11:53452386-53452236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr11:69402289-69402138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               9, 101
               

               Conread position:
               389-532
               

               Cow position:
               chr11:84795788-84795641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               389-534
               

               Cow position:
               chr11:9055921-9056068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 26
               

               Conread position:
               389-535
               

               Cow position:
               chr11:60137655-60137801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               9, 82
               

               Conread position:
               389-537
               

               Cow position:
               chr11:17151636-17151784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               9, 32
               

               Conread position:
               389-537
               

               Cow position:
               chr11:39808953-39809101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               14, 139
               

               Conread position:
               389-537
               

               Cow position:
               chr11:40275640-40275488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               389-537
               

               Cow position:
               chr11:40279132-40278980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               389-537
               

               Cow position:
               chr11:67236362-67236513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               390-537
               

               Cow position:
               chr11:19501930-19502081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               8, 81
               

               Conread position:
               390-537
               

               Cow position:
               chr11:53445740-53445885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               392-537
               

               Cow position:
               chr11:7001967-7001816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               393-531
               

               Cow position:
               chr11:50953598-50953456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               395-529
               

               Cow position:
               chr11:19606285-19606417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               71, 94
               

               Conread position:
               396-519
               

               Cow position:
               chr11:25861636-25861512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               46, 62
               

               Conread position:
               396-519
               

               Cow position:
               chr11:67745293-67745415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               397-537
               

               Cow position:
               chr11:66401669-66401803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               400-537
               

               Cow position:
               chr11:11785304-11785446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               400-537
               

               Cow position:
               chr11:36701725-36701862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               42, 109
               

               Conread position:
               410-535
               

               Cow position:
               chr11:13306837-13306712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               413-532
               

               Cow position:
               chr11:8232464-8232342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               29, 103
               

               Conread position:
               413-537
               

               Cow position:
               chr11:13122026-13121902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               413-537
               

               Cow position:
               chr11:17891896-17892020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               413-537
               

               Cow position:
               chr11:34642244-34642120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               414-537
               

               Cow position:
               chr11:46700001-46700122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               418-537
               

               Cow position:
               chr11:77008032-77008154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               424-537
               

               Cow position:
               chr11:6729670-6729781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               431-537
               

               Cow position:
               chr11:67940910-67941015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               432-537
               

               Cow position:
               chr11:373136-373031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               435-532
               

               Cow position:
               chr11:696337-696240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               85
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               440-536
               

               Cow position:
               chr11:54058007-54058103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               444-537
               

               Cow position:
               chr11:76007400-76007492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               82
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               311-532
               

               Cow position:
               chr12:31529003-31528768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               312-537
               

               Cow position:
               chr12:34849985-34849766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               312-537
               

               Cow position:
               chr12:34852624-34852403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               15, 84
               

               Conread position:
               313-499
               

               Cow position:
               chr12:14523796-14523986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               68, 17
               

               Conread position:
               313-532
               

               Cow position:
               chr12:47064001-47063790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               314-524
               

               Cow position:
               chr12:3757182-3756968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               74, 16
               

               Conread position:
               314-524
               

               Cow position:
               chr12:21861931-21861728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               95, 16
               

               Conread position:
               314-530
               

               Cow position:
               chr12:10846779-10846565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               27, 43
               

               Conread position:
               315-537
               

               Cow position:
               chr12:30596324-30596561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               70, 22
               

               Conread position:
               319-537
               

               Cow position:
               chr12:4582819-4583038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               121, 11
               

               Conread position:
               321-524
               

               Cow position:
               chr12:27495870-27496080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               11, 101
               

               Conread position:
               321-537
               

               Cow position:
               chr12:18769213-18768978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               323-532
               

               Cow position:
               chr12:25312508-25312286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               65, 49
               

               Conread position:
               327-536
               

               Cow position:
               chr12:30064812-30065026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               17, 196
               

               Conread position:
               330-523
               

               Cow position:
               chr12:3212198-3212396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               54, 13
               

               Conread position:
               333-519
               

               Cow position:
               chr12:1357553-1357364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               53, 117
               

               Conread position:
               333-534
               

               Cow position:
               chr12:16543704-16543488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               333-537
               

               Cow position:
               chr12:1223472-1223253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               11, 197
               

               Conread position:
               333-537
               

               Cow position:
               chr12:14325399-14325180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               11, 179
               

               Conread position:
               335-537
               

               Cow position:
               chr12:5797676-5797472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               45, 17
               

               Conread position:
               344-537
               

               Cow position:
               chr12:21828970-21829165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               71, 109
               

               Conread position:
               348-537
               

               Cow position:
               chr12:24204423-24204220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               380-531
               

               Cow position:
               chr12:17262788-17262938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               380-537
               

               Cow position:
               chr12:18966822-18966664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               383-537
               

               Cow position:
               chr12:7996347-7996503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               14, 31
               

               Conread position:
               383-537
               

               Cow position:
               chr12:44057454-44057607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               384-537
               

               Cow position:
               chr12:48425649-48425802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               14, 75
               

               Conread position:
               388-530
               

               Cow position:
               chr12:7645864-7645723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               9, 24
               

               Conread position:
               388-531
               

               Cow position:
               chr12:40716102-40715959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               9, 130
               

               Conread position:
               388-535
               

               Cow position:
               chr12:18093832-18093980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               9, 97
               

               Conread position:
               393-532
               

               Cow position:
               chr12:5658802-5658659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               42, 71
               

               Conread position:
               393-537
               

               Cow position:
               chr12:13657799-13657651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               395-537
               

               Cow position:
               chr12:29691246-29691104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr12:5497874-5497734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               399-531
               

               Cow position:
               chr12:34242375-34242239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               399-537
               

               Cow position:
               chr12:45541662-45541800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               401-537
               

               Cow position:
               chr12:32413466-32413608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               407-505
               

               Cow position:
               chr12:9131229-9131327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               83
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               411-536
               

               Cow position:
               chr12:14855777-14855902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               412-535
               

               Cow position:
               chr12:16205691-16205816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               413-534
               

               Cow position:
               chr12:25933649-25933774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               415-532
               

               Cow position:
               chr12:39754253-39754370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               422-537
               

               Cow position:
               chr12:27038765-27038650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               7, 27
               

               Conread position:
               442-537
               

               Cow position:
               chr12:36109265-36109170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               84
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               296-537
               

               Cow position:
               chr13:18551105-18550859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               304-530
               

               Cow position:
               chr13:35564402-35564173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               19, 61
               

               Conread position:
               313-519
               

               Cow position:
               chr13:20834765-20834972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               44, 25
               

               Conread position:
               313-537
               

               Cow position:
               chr13:22075767-22075525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               314-489
               

               Cow position:
               chr13:54695824-54696011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               74, 16
               

               Conread position:
               314-531
               

               Cow position:
               chr13:16327749-16327531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               50, 18
               

               Conread position:
               314-532
               

               Cow position:
               chr13:46501394-46501181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               314-535
               

               Cow position:
               chr13:9125760-9125527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               81, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr13:33282097-33281860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               72, 16
               

               Conread position:
               316-537
               

               Cow position:
               chr13:12745752-12745526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               34, 71
               

               Conread position:
               318-537
               

               Cow position:
               chr13:3016086-3016319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               319-529
               

               Cow position:
               chr13:22886908-22887127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               53, 11
               

               Conread position:
               323-537
               

               Cow position:
               chr13:26508546-26508338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               167
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               324-532
               

               Cow position:
               chr13:43166958-43167172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               44, 14
               

               Conread position:
               324-535
               

               Cow position:
               chr13:12521701-12521922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               8, 28
               

               Conread position:
               324-537
               

               Cow position:
               chr13:32717790-32718009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               61, 176
               

               Conread position:
               325-523
               

               Cow position:
               chr13:33975498-33975299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               62, 18
               

               Conread position:
               326-537
               

               Cow position:
               chr13:32167233-32167456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               60, 12
               

               Conread position:
               327-530
               

               Cow position:
               chr13:54864950-54865145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               70, 87
               

               Conread position:
               327-535
               

               Cow position:
               chr13:17346887-17346666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               327-537
               

               Cow position:
               chr13:16952530-16952325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               70, 56
               

               Conread position:
               328-532
               

               Cow position:
               chr13:26522868-26523078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               330-537
               

               Cow position:
               chr13:33954953-33955171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               58, 8
               

               Conread position:
               332-532
               

               Cow position:
               chr13:43155787-43155996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               333-478
               

               Cow position:
               chr13:38691469-38691617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 127
               

               Conread position:
               333-529
               

               Cow position:
               chr13:50739240-50739031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               333-532
               

               Cow position:
               chr13:24280320-24280116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               69, 25
               

               Conread position:
               333-532
               

               Cow position:
               chr13:40464292-40464089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               342-537
               

               Cow position:
               chr13:32657431-32657231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               98, 5
               

               Conread position:
               361-530
               

               Cow position:
               chr13:32904814-32904640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               380-537
               

               Cow position:
               chr13:54094826-54094664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               381-532
               

               Cow position:
               chr13:52966886-52966737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               16, 88
               

               Conread position:
               381-532
               

               Cow position:
               chr13:54814898-54815052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               381-534
               

               Cow position:
               chr13:56673959-56674114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               381-537
               

               Cow position:
               chr13:35719126-35719283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               383-535
               

               Cow position:
               chr13:54471022-54470873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               46, 113
               

               Conread position:
               386-532
               

               Cow position:
               chr13:58620937-58621085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               23, 107
               

               Conread position:
               388-532
               

               Cow position:
               chr13:11834472-11834620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 24
               

               Conread position:
               388-532
               

               Cow position:
               chr13:49847931-49847785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 134
               

               Conread position:
               388-535
               

               Cow position:
               chr13:33347133-33346992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               15, 69
               

               Conread position:
               388-536
               

               Cow position:
               chr13:21120867-21120722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 92
               

               Conread position:
               388-537
               

               Cow position:
               chr13:14099107-14099258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr13:14717331-14717484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               9, 129
               

               Conread position:
               388-537
               

               Cow position:
               chr13:18761726-18761874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               10, 79
               

               Conread position:
               388-537
               

               Cow position:
               chr13:46284609-46284754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               9, 51
               

               Conread position:
               388-537
               

               Cow position:
               chr13:54969796-54969951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               9, 53
               

               Conread position:
               389-516
               

               Cow position:
               chr13:18350839-18350711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               389-532
               

               Cow position:
               chr13:7010475-7010332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               9, 89
               

               Conread position:
               389-535
               

               Cow position:
               chr13:38898239-38898383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               8, 104
               

               Conread position:
               389-537
               

               Cow position:
               chr13:29820199-29820352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               390-519
               

               Cow position:
               chr13:35654089-35654218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               99
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               7, 56
               

               Conread position:
               395-535
               

               Cow position:
               chr13:46430308-46430447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               396-527
               

               Cow position:
               chr13:54080815-54080950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               396-536
               

               Cow position:
               chr13:9803063-9802923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               396-536
               

               Cow position:
               chr13:15090911-15091054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               46, 78
               

               Conread position:
               396-537
               

               Cow position:
               chr13:661645-661782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr13:34761676-34761539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               397-535
               

               Cow position:
               chr13:20156480-20156343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               399-505
               

               Cow position:
               chr13:6894030-6893924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               399-536
               

               Cow position:
               chr13:17796364-17796223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               36, 105
               

               Conread position:
               400-535
               

               Cow position:
               chr13:58348074-58347942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               400-537
               

               Cow position:
               chr13:30271314-30271178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               402-537
               

               Cow position:
               chr13:14220483-14220351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               404-536
               

               Cow position:
               chr13:55592049-55592179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               404-536
               

               Cow position:
               chr13:55618130-55618260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               408-515
               

               Cow position:
               chr13:11413351-11413461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               413-535
               

               Cow position:
               chr13:17991637-17991515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               413-536
               

               Cow position:
               chr13:46353535-46353658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               413-537
               

               Cow position:
               chr13:11463374-11463495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               413-537
               

               Cow position:
               chr13:22082368-22082244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               421-537
               

               Cow position:
               chr13:37435288-37435175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               428-530
               

               Cow position:
               chr13:46394530-46394428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               431-537
               

               Cow position:
               chr13:40460125-40460019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               432-532
               

               Cow position:
               chr13:10658042-10657942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               82
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               432-535
               

               Cow position:
               chr13:34191755-34191857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               433-532
               

               Cow position:
               chr13:25207072-25206973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               435-535
               

               Cow position:
               chr13:25058111-25058011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               440-537
               

               Cow position:
               chr13:9501636-9501732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               84
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               440-537
               

               Cow position:
               chr13:11514228-11514131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               83
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               440-537
               

               Cow position:
               chr13:22783897-22783994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               83
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               440-537
               

               Cow position:
               chr13:26507886-26507789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               87
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               445-528
               

               Cow position:
               chr13:53858115-53858198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               84
               

               Alignm identity:
               76
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               313-530
               

               Cow position:
               chr14:7647878-7648101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               16, 40
               

               Conread position:
               313-535
               

               Cow position:
               chr14:20069365-20069592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               79, 25
               

               Conread position:
               313-537
               

               Cow position:
               chr14:23107482-23107234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               314-519
               

               Cow position:
               chr14:8051281-8051079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               314-536
               

               Cow position:
               chr14:28326989-28327210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               129, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr14:25458477-25458254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               95, 9
               

               Conread position:
               316-537
               

               Cow position:
               chr14:15990356-15990136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               69, 186
               

               Conread position:
               317-524
               

               Cow position:
               chr14:8766841-8766628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               321-522
               

               Cow position:
               chr14:21018257-21018040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               323-521
               

               Cow position:
               chr14:22982578-22982781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               67, 124
               

               Conread position:
               323-524
               

               Cow position:
               chr14:24436390-24436182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               58, 15
               

               Conread position:
               323-528
               

               Cow position:
               chr14:37333831-37333619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               72, 20
               

               Conread position:
               325-526
               

               Cow position:
               chr14:31399711-31399518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               327-522
               

               Cow position:
               chr14:19888095-19888294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               15, 166
               

               Conread position:
               330-528
               

               Cow position:
               chr14:7582318-7582528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               54, 8
               

               Conread position:
               330-536
               

               Cow position:
               chr14:1553885-1553678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               13, 74
               

               Conread position:
               330-537
               

               Cow position:
               chr14:20045686-20045462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               60, 8
               

               Conread position:
               333-527
               

               Cow position:
               chr14:37678870-37679082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               333-537
               

               Cow position:
               chr14:28565593-28565385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               333-537
               

               Cow position:
               chr14:47138670-47138876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               159
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               335-536
               

               Cow position:
               chr14:43565769-43565966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               10, 87
               

               Conread position:
               343-535
               

               Cow position:
               chr14:46962657-46962464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               64, 176
               

               Conread position:
               361-532
               

               Cow position:
               chr14:28605326-28605149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               364-528
               

               Cow position:
               chr14:26960326-26960496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               377-531
               

               Cow position:
               chr14:49049074-49049224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               381-535
               

               Cow position:
               chr14:20429652-20429494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               383-537
               

               Cow position:
               chr14:8488256-8488108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               15, 98
               

               Conread position:
               386-531
               

               Cow position:
               chr14:21369431-21369286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               11, 72
               

               Conread position:
               386-537
               

               Cow position:
               chr14:20865253-20865396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               17, 62
               

               Conread position:
               387-537
               

               Cow position:
               chr14:26448814-26448671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               11, 63
               

               Conread position:
               388-532
               

               Cow position:
               chr14:26108698-26108549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               388-534
               

               Cow position:
               chr14:19022833-19022984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               388-535
               

               Cow position:
               chr14:22657308-22657163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               388-535
               

               Cow position:
               chr14:34256861-34257006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr14:7813507-7813655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               9, 109
               

               Conread position:
               388-537
               

               Cow position:
               chr14:13928059-13928213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr14:27104144-27103994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr14:45515513-45515663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr14:47974045-47973896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               16, 59
               

               Conread position:
               389-528
               

               Cow position:
               chr14:23008241-23008102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               389-537
               

               Cow position:
               chr14:6984902-6985043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr14:2189689-2189547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               46, 96
               

               Conread position:
               396-537
               

               Cow position:
               chr14:44595072-44595212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               398-537
               

               Cow position:
               chr14:21691221-21691364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               41, 91
               

               Conread position:
               399-537
               

               Cow position:
               chr14:6583051-6582912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               409-532
               

               Cow position:
               chr14:37624730-37624853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               413-537
               

               Cow position:
               chr14:26153230-26153357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               413-537
               

               Cow position:
               chr14:36080879-36081003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               415-524
               

               Cow position:
               chr14:18093818-18093923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               416-537
               

               Cow position:
               chr14:20795809-20795685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               26, 105
               

               Conread position:
               419-537
               

               Cow position:
               chr14:10935676-10935793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               79, 69
               

               Conread position:
               429-537
               

               Cow position:
               chr14:10936301-10936192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               440-535
               

               Cow position:
               chr14:8517980-8518074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               83
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               296-537
               

               Cow position:
               chr15:35967276-35967527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               96, 34
               

               Conread position:
               299-537
               

               Cow position:
               chr15:26933747-26933991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               36, 59
               

               Conread position:
               312-532
               

               Cow position:
               chr15:34255546-34255759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               312-535
               

               Cow position:
               chr15:37918839-37918606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               79, 18
               

               Conread position:
               312-537
               

               Cow position:
               chr15:9178009-9178244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               182
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               32, 18
               

               Conread position:
               312-537
               

               Cow position:
               chr15:10568924-10569150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               83, 18
               

               Conread position:
               314-505
               

               Cow position:
               chr15:16585705-16585502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               67, 17
               

               Conread position:
               314-524
               

               Cow position:
               chr15:23957898-23957685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               100, 16
               

               Conread position:
               314-527
               

               Cow position:
               chr15:26734822-26734605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               70, 16
               

               Conread position:
               314-532
               

               Cow position:
               chr15:24411610-24411384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               74, 16
               

               Conread position:
               323-537
               

               Cow position:
               chr15:20482657-20482889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               324-535
               

               Cow position:
               chr15:34037008-34037231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               324-537
               

               Cow position:
               chr15:21836868-21836647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               62, 14
               

               Conread position:
               330-525
               

               Cow position:
               chr15:23139972-23140154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               66, 39
               

               Conread position:
               330-530
               

               Cow position:
               chr15:4277885-4278094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               60, 8
               

               Conread position:
               332-537
               

               Cow position:
               chr15:10698401-10698593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               25, 15
               

               Conread position:
               333-527
               

               Cow position:
               chr15:4373654-4373456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               78, 180
               

               Conread position:
               333-532
               

               Cow position:
               chr15:31545174-31545385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               333-534
               

               Cow position:
               chr15:6749670-6749884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               64, 31
               

               Conread position:
               333-537
               

               Cow position:
               chr15:22886728-22886516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               54, 114
               

               Conread position:
               333-537
               

               Cow position:
               chr15:27247680-27247464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               334-537
               

               Cow position:
               chr15:22854581-22854367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               52, 168
               

               Conread position:
               335-537
               

               Cow position:
               chr15:36658954-36659154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               336-521
               

               Cow position:
               chr15:30934375-30934569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               340-524
               

               Cow position:
               chr15:39363841-39364028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               23, 16
               

               Conread position:
               380-532
               

               Cow position:
               chr15:35283348-35283504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               380-537
               

               Cow position:
               chr15:12163401-12163561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               17, 35
               

               Conread position:
               380-537
               

               Cow position:
               chr15:17788225-17788069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               380-537
               

               Cow position:
               chr15:39200898-39200742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               17, 31
               

               Conread position:
               380-537
               

               Cow position:
               chr15:40498174-40498335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               380-537
               

               Cow position:
               chr15:52981946-52981796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               381-532
               

               Cow position:
               chr15:42195148-42195302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               16, 112
               

               Conread position:
               381-537
               

               Cow position:
               chr15:24864151-24864307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               16, 73
               

               Conread position:
               383-524
               

               Cow position:
               chr15:31182543-31182403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               14, 59
               

               Conread position:
               383-531
               

               Cow position:
               chr15:3572586-3572735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               383-537
               

               Cow position:
               chr15:11957655-11957498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               383-537
               

               Cow position:
               chr15:26421484-26421640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               384-537
               

               Cow position:
               chr15:44879717-44879564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               111, 130
               

               Conread position:
               385-536
               

               Cow position:
               chr15:31599445-31599293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               385-536
               

               Cow position:
               chr15:31907760-31907609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               12, 89
               

               Conread position:
               387-531
               

               Cow position:
               chr15:36839063-36839209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               388-522
               

               Cow position:
               chr15:46005540-46005675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               388-526
               

               Cow position:
               chr15:37964642-37964503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               388-528
               

               Cow position:
               chr15:27749072-27749209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               9, 32
               

               Conread position:
               388-536
               

               Cow position:
               chr15:47821486-47821338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               9, 17
               

               Conread position:
               388-536
               

               Cow position:
               chr15:50561287-50561438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               69, 25
               

               Conread position:
               388-537
               

               Cow position:
               chr15:12036921-12036771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr15:24977068-24977215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               389-537
               

               Cow position:
               chr15:23109172-23109325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr15:27863223-27863368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr15:38322938-38322793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               399-532
               

               Cow position:
               chr15:10303322-10303185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               399-535
               

               Cow position:
               chr15:8022150-8022014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               399-537
               

               Cow position:
               chr15:15215117-15214975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               402-537
               

               Cow position:
               chr15:4216049-4216180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               403-537
               

               Cow position:
               chr15:23547897-23548031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               416-537
               

               Cow position:
               chr15:10189442-10189322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               419-530
               

               Cow position:
               chr15:35663530-35663415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               419-536
               

               Cow position:
               chr15:23224477-23224588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               13, 70
               

               Conread position:
               419-537
               

               Cow position:
               chr15:5527192-5527074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               430-537
               

               Cow position:
               chr15:51583104-51582997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               434-537
               

               Cow position:
               chr15:14323355-14323457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               435-530
               

               Cow position:
               chr15:28177514-28177419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               80
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               449-532
               

               Cow position:
               chr15:45641174-45641257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               84
               

               Alignm identity:
               74
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               299-524
               

               Cow position:
               chr16:12612814-12612601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               105, 24
               

               Conread position:
               312-537
               

               Cow position:
               chr16:38620849-38621087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               76, 18
               

               Conread position:
               314-505
               

               Cow position:
               chr16:25127110-25127299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               59, 16
               

               Conread position:
               314-522
               

               Cow position:
               chr16:12169797-12169588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               75, 16
               

               Conread position:
               314-524
               

               Cow position:
               chr16:52218975-52219189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               67, 16
               

               Conread position:
               314-531
               

               Cow position:
               chr16:28267118-28266905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               67, 16
               

               Conread position:
               315-537
               

               Cow position:
               chr16:2619073-2618856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               5, 55
               

               Conread position:
               319-518
               

               Cow position:
               chr16:6998243-6998435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               78, 11
               

               Conread position:
               319-522
               

               Cow position:
               chr16:51880087-51879887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               326-537
               

               Cow position:
               chr16:19976878-19977095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               174
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               18, 110
               

               Conread position:
               327-520
               

               Cow position:
               chr16:40732121-40732317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               17, 88
               

               Conread position:
               330-519
               

               Cow position:
               chr16:52683307-52683499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               60, 119
               

               Conread position:
               330-527
               

               Cow position:
               chr16:4499344-4499550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               60, 8
               

               Conread position:
               330-528
               

               Cow position:
               chr16:55586691-55586488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               58, 8
               

               Conread position:
               332-524
               

               Cow position:
               chr16:49579995-49580190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               42, 91
               

               Conread position:
               333-534
               

               Cow position:
               chr16:16056138-16055931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               58, 25
               

               Conread position:
               334-522
               

               Cow position:
               chr16:21095574-21095390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               63, 27
               

               Conread position:
               334-534
               

               Cow position:
               chr16:228576-228367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               334-537
               

               Cow position:
               chr16:20260403-20260605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               112, 52
               

               Conread position:
               334-537
               

               Cow position:
               chr16:26156225-26156011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               52, 165
               

               Conread position:
               335-518
               

               Cow position:
               chr16:28112007-28111827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               62, 45
               

               Conread position:
               340-537
               

               Cow position:
               chr16:41711599-41711803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               49, 120
               

               Conread position:
               362-524
               

               Cow position:
               chr16:18949550-18949712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               36, 84
               

               Conread position:
               362-524
               

               Cow position:
               chr16:36537975-36538138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               22, 111
               

               Conread position:
               362-537
               

               Cow position:
               chr16:15320532-15320352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               27, 114
               

               Conread position:
               375-532
               

               Cow position:
               chr16:3566138-3566289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               380-505
               

               Cow position:
               chr16:12738289-12738415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               96
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               380-532
               

               Cow position:
               chr16:47909373-47909216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               383-532
               

               Cow position:
               chr16:45693121-45693273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               14, 79
               

               Conread position:
               383-532
               

               Cow position:
               chr16:53420317-53420464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 106
               

               Conread position:
               383-535
               

               Cow position:
               chr16:47368735-47368887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               14, 76
               

               Conread position:
               383-537
               

               Cow position:
               chr16:16946564-16946406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               383-537
               

               Cow position:
               chr16:18427160-18427315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               383-537
               

               Cow position:
               chr16:19003115-19002960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               383-537
               

               Cow position:
               chr16:31419419-31419578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               383-537
               

               Cow position:
               chr16:52222351-52222200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               384-524
               

               Cow position:
               chr16:46204857-46204997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               13, 62
               

               Conread position:
               387-532
               

               Cow position:
               chr16:44581095-44580945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               387-537
               

               Cow position:
               chr16:30639314-30639456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               388-530
               

               Cow position:
               chr16:56104934-56104789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               9, 113
               

               Conread position:
               388-531
               

               Cow position:
               chr16:11662014-11662158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr16:10303768-10303619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               9, 48
               

               Conread position:
               388-537
               

               Cow position:
               chr16:23066640-23066786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               10, 74
               

               Conread position:
               388-537
               

               Cow position:
               chr16:28454311-28454161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr16:44898771-44898624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               11, 101
               

               Conread position:
               389-535
               

               Cow position:
               chr16:12072620-12072764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               8, 52
               

               Conread position:
               390-537
               

               Cow position:
               chr16:32837564-32837417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               7, 25
               

               Conread position:
               390-537
               

               Cow position:
               chr16:43082252-43082108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               7, 104
               

               Conread position:
               396-537
               

               Cow position:
               chr16:16546063-16546204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               397-505
               

               Cow position:
               chr16:11153200-11153092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               400-505
               

               Cow position:
               chr16:34210408-34210305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               403-537
               

               Cow position:
               chr16:23978440-23978302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               408-528
               

               Cow position:
               chr16:9510872-9510752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               413-537
               

               Cow position:
               chr16:31490323-31490446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               416-532
               

               Cow position:
               chr16:9407868-9407752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               416-536
               

               Cow position:
               chr16:25464066-25464183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               432-537
               

               Cow position:
               chr16:17617111-17617006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               6, 64
               

               Conread position:
               433-537
               

               Cow position:
               chr16:49122237-49122135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               434-532
               

               Cow position:
               chr16:10611596-10611498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               83
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               439-535
               

               Cow position:
               chr16:52565453-52565548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               81
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               446-537
               

               Cow position:
               chr16:4708861-4708770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               79
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               292-524
               

               Cow position:
               chr17:9778578-9778802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               98, 38
               

               Conread position:
               312-537
               

               Cow position:
               chr17:20216098-20216338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               49, 18
               

               Conread position:
               313-537
               

               Cow position:
               chr17:11171726-11171958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               72, 17
               

               Conread position:
               314-484
               

               Cow position:
               chr17:18824725-18824905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               314-524
               

               Cow position:
               chr17:25740887-25741104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               72, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr17:21730354-21730125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               73, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr17:27257297-27257047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               74, 16
               

               Conread position:
               315-524
               

               Cow position:
               chr17:35991032-35991240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               73, 28
               

               Conread position:
               316-537
               

               Cow position:
               chr17:2270945-2271170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               41, 34
               

               Conread position:
               321-524
               

               Cow position:
               chr17:19881069-19881267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               321-525
               

               Cow position:
               chr17:10790256-10790456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               65, 51
               

               Conread position:
               322-523
               

               Cow position:
               chr17:26084977-26085179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               70, 20
               

               Conread position:
               325-537
               

               Cow position:
               chr17:10271439-10271662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               63, 137
               

               Conread position:
               327-526
               

               Cow position:
               chr17:9060189-9059989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               47, 19
               

               Conread position:
               327-536
               

               Cow position:
               chr17:39012671-39012888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               59, 184
               

               Conread position:
               330-537
               

               Cow position:
               chr17:7595116-7595321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               330-537
               

               Cow position:
               chr17:15634921-15634714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               67, 8
               

               Conread position:
               330-537
               

               Cow position:
               chr17:32457619-32457398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               51, 8
               

               Conread position:
               333-524
               

               Cow position:
               chr17:24339135-24339326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               56, 46
               

               Conread position:
               333-529
               

               Cow position:
               chr17:27819254-27819459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               333-532
               

               Cow position:
               chr17:5380922-5381117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               141, 66
               

               Conread position:
               333-532
               

               Cow position:
               chr17:37138715-37138924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               50, 31
               

               Conread position:
               335-535
               

               Cow position:
               chr17:35107162-35107365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               45, 9
               

               Conread position:
               335-537
               

               Cow position:
               chr17:30236164-30236364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               62, 10
               

               Conread position:
               336-522
               

               Cow position:
               chr17:8890258-8890446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               50, 112
               

               Conread position:
               337-530
               

               Cow position:
               chr17:3620115-3619923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               101, 41
               

               Conread position:
               338-535
               

               Cow position:
               chr17:8832163-8831974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               71, 17
               

               Conread position:
               340-515
               

               Cow position:
               chr17:11837381-11837552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               350-537
               

               Cow position:
               chr17:27505076-27505267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               362-520
               

               Cow position:
               chr17:40854846-40855006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               28, 51
               

               Conread position:
               380-529
               

               Cow position:
               chr17:34864585-34864731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               26, 34
               

               Conread position:
               380-536
               

               Cow position:
               chr17:37414884-37414730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               17, 42
               

               Conread position:
               381-531
               

               Cow position:
               chr17:25707970-25708121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               383-531
               

               Cow position:
               chr17:33903906-33903758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               14, 84
               

               Conread position:
               383-536
               

               Cow position:
               chr17:13716021-13715864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               383-536
               

               Cow position:
               chr17:25181130-25180980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               383-537
               

               Cow position:
               chr17:9748760-9748915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               383-537
               

               Cow position:
               chr17:35212382-35212527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               14, 57
               

               Conread position:
               384-536
               

               Cow position:
               chr17:18568920-18568767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 87
               

               Conread position:
               388-532
               

               Cow position:
               chr17:6570119-6569979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               9, 108
               

               Conread position:
               388-537
               

               Cow position:
               chr17:4085776-4085926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               115, 131
               

               Conread position:
               388-537
               

               Cow position:
               chr17:23318299-23318150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 125
               

               Conread position:
               389-531
               

               Cow position:
               chr17:5787815-5787673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 129
               

               Conread position:
               389-537
               

               Cow position:
               chr17:144156-144009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               389-537
               

               Cow position:
               chr17:1455918-1455771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               8, 52
               

               Conread position:
               389-537
               

               Cow position:
               chr17:26614710-26614562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               9, 99
               

               Conread position:
               393-505
               

               Cow position:
               chr17:33153987-33154099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               393-537
               

               Cow position:
               chr17:13229402-13229547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               47, 20
               

               Conread position:
               396-535
               

               Cow position:
               chr17:15922868-15923006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr17:38139535-38139680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               397-532
               

               Cow position:
               chr17:24880771-24880906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               397-532
               

               Cow position:
               chr17:34627818-34627684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               397-537
               

               Cow position:
               chr17:18173790-18173660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               403-537
               

               Cow position:
               chr17:8861112-8860985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               417-537
               

               Cow position:
               chr17:23879475-23879355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               419-537
               

               Cow position:
               chr17:37043362-37043247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               423-535
               

               Cow position:
               chr17:11826400-11826288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               425-537
               

               Cow position:
               chr17:27781125-27781237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               435-537
               

               Cow position:
               chr17:8093916-8094017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               299-537
               

               Cow position:
               chr18:32773716-32773976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               29, 208
               

               Conread position:
               302-536
               

               Cow position:
               chr18:20423125-20422882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               84, 30
               

               Conread position:
               313-522
               

               Cow position:
               chr18:37745669-37745884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               76, 17
               

               Conread position:
               314-528
               

               Cow position:
               chr18:24364185-24363971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               78, 16
               

               Conread position:
               314-532
               

               Cow position:
               chr18:45961409-45961178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               71, 17
               

               Conread position:
               314-537
               

               Cow position:
               chr18:19363796-19364030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               76, 16
               

               Conread position:
               316-537
               

               Cow position:
               chr18:51412232-51412442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               323-525
               

               Cow position:
               chr18:36649822-36650029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               58, 128
               

               Conread position:
               323-528
               

               Cow position:
               chr18:33843204-33842996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               66, 21
               

               Conread position:
               323-531
               

               Cow position:
               chr18:21706310-21706092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               89, 15
               

               Conread position:
               327-524
               

               Cow position:
               chr18:17334540-17334336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               63, 85
               

               Conread position:
               327-536
               

               Cow position:
               chr18:35797495-35797714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               14, 202
               

               Conread position:
               330-522
               

               Cow position:
               chr18:43970245-43970431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               68, 8
               

               Conread position:
               330-537
               

               Cow position:
               chr18:33275187-33275387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               68, 8
               

               Conread position:
               333-519
               

               Cow position:
               chr18:3780325-3780512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               61, 31
               

               Conread position:
               333-520
               

               Cow position:
               chr18:18727674-18727489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               65, 23
               

               Conread position:
               333-524
               

               Cow position:
               chr18:23360512-23360714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               333-524
               

               Cow position:
               chr18:41072881-41073069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               57, 114
               

               Conread position:
               333-534
               

               Cow position:
               chr18:23424797-23425013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               333-537
               

               Cow position:
               chr18:25003002-25002792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               65, 158
               

               Conread position:
               333-537
               

               Cow position:
               chr18:32908926-32909145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               53, 173
               

               Conread position:
               333-537
               

               Cow position:
               chr18:44493591-44493388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               88, 65
               

               Conread position:
               334-532
               

               Cow position:
               chr18:35359849-35360060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               335-531
               

               Cow position:
               chr18:16726528-16726740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               335-537
               

               Cow position:
               chr18:15831713-15831500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               53, 201
               

               Conread position:
               340-537
               

               Cow position:
               chr18:35767075-35767266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               131, 16
               

               Conread position:
               380-537
               

               Cow position:
               chr18:1190782-1190624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               18, 28
               

               Conread position:
               381-516
               

               Cow position:
               chr18:46321040-46320905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               17, 84
               

               Conread position:
               383-532
               

               Cow position:
               chr18:34325012-34324862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               383-535
               

               Cow position:
               chr18:37331586-37331433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               383-537
               

               Cow position:
               chr18:5755920-5756076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               383-537
               

               Cow position:
               chr18:38126509-38126352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               26, 115
               

               Conread position:
               386-537
               

               Cow position:
               chr18:44400392-44400544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               388-524
               

               Cow position:
               chr18:19850777-19850641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 58
               

               Conread position:
               388-531
               

               Cow position:
               chr18:6157861-6158005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               388-532
               

               Cow position:
               chr18:55697075-55696931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               389-524
               

               Cow position:
               chr18:32517404-32517268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               390-537
               

               Cow position:
               chr18:10101438-10101585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 81
               

               Conread position:
               396-532
               

               Cow position:
               chr18:26372873-26373013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               396-536
               

               Cow position:
               chr18:30566602-30566463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr18:50700640-50700782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               46, 96
               

               Conread position:
               401-537
               

               Cow position:
               chr18:48458632-48458772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               414-536
               

               Cow position:
               chr18:33853223-33853342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               414-537
               

               Cow position:
               chr18:7409327-7409204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               419-535
               

               Cow position:
               chr18:39211034-39210918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               420-530
               

               Cow position:
               chr18:4624940-4624830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               420-537
               

               Cow position:
               chr18:24221551-24221668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-537
               

               Cow position:
               chr18:21095110-21095006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               442-530
               

               Cow position:
               chr18:28794840-28794928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               89
               

               Alignm identity:
               76
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               312-537
               

               Cow position:
               chr19:5648775-5648547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               85, 197
               

               Conread position:
               312-537
               

               Cow position:
               chr19:35064314-35064071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               314-535
               

               Cow position:
               chr19:31826983-31827207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               105, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr19:25271536-25271299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               314-537
               

               Cow position:
               chr19:36977031-36976792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               72, 16
               

               Conread position:
               319-524
               

               Cow position:
               chr19:22168406-22168614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               67, 11
               

               Conread position:
               321-537
               

               Cow position:
               chr19:31381105-31380887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               77, 37
               

               Conread position:
               324-535
               

               Cow position:
               chr19:19661936-19662162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               324-537
               

               Cow position:
               chr19:50658041-50658258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               8, 121
               

               Conread position:
               327-524
               

               Cow position:
               chr19:33260925-33261128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               163
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               78, 34
               

               Conread position:
               330-519
               

               Cow position:
               chr19:43517129-43517317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               66, 105
               

               Conread position:
               330-522
               

               Cow position:
               chr19:35782234-35782037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               58, 8
               

               Conread position:
               330-524
               

               Cow position:
               chr19:25711421-25711220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               58, 125
               

               Conread position:
               330-524
               

               Cow position:
               chr19:42215983-42216176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               67, 8
               

               Conread position:
               330-528
               

               Cow position:
               chr19:11637029-11636831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               156
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               67, 8
               

               Conread position:
               330-535
               

               Cow position:
               chr19:21285178-21284963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               167
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               330-537
               

               Cow position:
               chr19:2342379-2342598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               55, 8
               

               Conread position:
               334-520
               

               Cow position:
               chr19:39876618-39876428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               51, 24
               

               Conread position:
               335-537
               

               Cow position:
               chr19:2771111-2770897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               380-524
               

               Cow position:
               chr19:22863707-22863562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               17, 66
               

               Conread position:
               380-537
               

               Cow position:
               chr19:24689243-24689401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               380-537
               

               Cow position:
               chr19:30935812-30935655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               62, 112
               

               Conread position:
               381-530
               

               Cow position:
               chr19:9100105-9100260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               381-537
               

               Cow position:
               chr19:7839082-7838928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               16, 108
               

               Conread position:
               383-531
               

               Cow position:
               chr19:53738300-53738447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               383-532
               

               Cow position:
               chr19:36461568-36461413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               383-532
               

               Cow position:
               chr19:38871029-38871183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               383-535
               

               Cow position:
               chr19:952655-952806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               14, 121
               

               Conread position:
               383-537
               

               Cow position:
               chr19:6735267-6735106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               387-536
               

               Cow position:
               chr19:21091064-21091213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               388-505
               

               Cow position:
               chr19:19924632-19924517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               9, 101
               

               Conread position:
               388-530
               

               Cow position:
               chr19:54225340-54225197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               9, 131
               

               Conread position:
               388-537
               

               Cow position:
               chr19:15936803-15936952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               10, 86
               

               Conread position:
               388-537
               

               Cow position:
               chr19:31614077-31614228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               124, 115
               

               Conread position:
               388-537
               

               Cow position:
               chr19:43727106-43727252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr19:48478947-48479096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               11, 145
               

               Conread position:
               389-523
               

               Cow position:
               chr19:14254760-14254625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               389-534
               

               Cow position:
               chr19:7029886-7030036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               389-535
               

               Cow position:
               chr19:36318276-36318423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               393-537
               

               Cow position:
               chr19:31126769-31126917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr19:28842385-28842240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr19:55236466-55236605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               399-537
               

               Cow position:
               chr19:2280662-2280525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               417-532
               

               Cow position:
               chr19:42896458-42896574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               91
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               419-530
               

               Cow position:
               chr19:3124050-3123942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               419-530
               

               Cow position:
               chr19:20076990-20077101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               419-537
               

               Cow position:
               chr19:5986232-5986355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               419-537
               

               Cow position:
               chr19:11147620-11147505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               419-537
               

               Cow position:
               chr19:39223105-39222991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               422-526
               

               Cow position:
               chr19:46497941-46498046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               422-537
               

               Cow position:
               chr19:46306334-46306218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               425-537
               

               Cow position:
               chr19:39986340-39986222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               426-537
               

               Cow position:
               chr19:42765228-42765118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               432-536
               

               Cow position:
               chr19:56126291-56126393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               311-537
               

               Cow position:
               chr2:42925188-42925422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               32, 8
               

               Conread position:
               312-532
               

               Cow position:
               chr2:70306051-70306269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               130, 18
               

               Conread position:
               313-536
               

               Cow position:
               chr2:7721019-7720783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               75, 114
               

               Conread position:
               313-537
               

               Cow position:
               chr2:83745143-83744923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               71, 197
               

               Conread position:
               314-495
               

               Cow position:
               chr2:15769600-15769417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               314-504
               

               Cow position:
               chr2:70601904-70602098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               71, 16
               

               Conread position:
               314-521
               

               Cow position:
               chr2:29288930-29289138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               77, 16
               

               Conread position:
               314-524
               

               Cow position:
               chr2:50606440-50606656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               70, 16
               

               Conread position:
               314-528
               

               Cow position:
               chr2:56269722-56269492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               67, 17
               

               Conread position:
               314-535
               

               Cow position:
               chr2:29382786-29382549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               73, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr2:67485138-67485377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               15, 25
               

               Conread position:
               315-532
               

               Cow position:
               chr2:4010016-4010227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               74, 23
               

               Conread position:
               318-530
               

               Cow position:
               chr2:45726087-45726306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               68, 12
               

               Conread position:
               319-530
               

               Cow position:
               chr2:14099545-14099773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               321-530
               

               Cow position:
               chr2:1651303-1651523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               10, 161
               

               Conread position:
               330-514
               

               Cow position:
               chr2:54306584-54306768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               54, 8
               

               Conread position:
               330-522
               

               Cow position:
               chr2:69046947-69047135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               62, 8
               

               Conread position:
               330-524
               

               Cow position:
               chr2:40791085-40791286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               330-524
               

               Cow position:
               chr2:56042448-56042246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               53, 8
               

               Conread position:
               330-524
               

               Cow position:
               chr2:70790840-70790635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               56, 8
               

               Conread position:
               330-537
               

               Cow position:
               chr2:24106302-24106528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               56, 8
               

               Conread position:
               330-537
               

               Cow position:
               chr2:27613112-27612900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               49, 8
               

               Conread position:
               330-537
               

               Cow position:
               chr2:42309645-42309424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               58, 8
               

               Conread position:
               332-532
               

               Cow position:
               chr2:31113758-31113965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               69, 179
               

               Conread position:
               333-529
               

               Cow position:
               chr2:425726-425937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               15, 207
               

               Conread position:
               333-534
               

               Cow position:
               chr2:41057601-41057394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               57, 19
               

               Conread position:
               333-535
               

               Cow position:
               chr2:62309516-62309303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               55, 91
               

               Conread position:
               333-537
               

               Cow position:
               chr2:67759216-67759022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               100, 28
               

               Conread position:
               335-532
               

               Cow position:
               chr2:21183078-21183271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               340-537
               

               Cow position:
               chr2:50400343-50400546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               72, 64
               

               Conread position:
               342-522
               

               Cow position:
               chr2:68010594-68010773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               345-532
               

               Cow position:
               chr2:77982212-77982021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               349-531
               

               Cow position:
               chr2:61471776-61471953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               380-532
               

               Cow position:
               chr2:38376875-38377027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               17, 148
               

               Conread position:
               380-532
               

               Cow position:
               chr2:39912624-39912477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               380-532
               

               Cow position:
               chr2:68273551-68273704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               380-534
               

               Cow position:
               chr2:2937537-2937688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               380-536
               

               Cow position:
               chr2:7498548-7498705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               380-537
               

               Cow position:
               chr2:793615-793777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               12, 107
               

               Conread position:
               380-537
               

               Cow position:
               chr2:13466007-13466164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               381-537
               

               Cow position:
               chr2:73027413-73027573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 37
               

               Conread position:
               382-505
               

               Cow position:
               chr2:73794292-73794169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               16, 100
               

               Conread position:
               383-498
               

               Cow position:
               chr2:33259276-33259393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               15, 32
               

               Conread position:
               383-518
               

               Cow position:
               chr2:66779886-66779751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               14, 63
               

               Conread position:
               383-519
               

               Cow position:
               chr2:70752772-70752909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               383-519
               

               Cow position:
               chr2:73999697-73999838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               383-532
               

               Cow position:
               chr2:70464409-70464558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               43, 88
               

               Conread position:
               383-537
               

               Cow position:
               chr2:14749566-14749723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               14, 92
               

               Conread position:
               383-537
               

               Cow position:
               chr2:31155684-31155840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               383-537
               

               Cow position:
               chr2:41765464-41765618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               59, 30
               

               Conread position:
               383-537
               

               Cow position:
               chr2:64197019-64196863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               387-532
               

               Cow position:
               chr2:82054866-82054719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 94
               

               Conread position:
               387-534
               

               Cow position:
               chr2:8601702-8601556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               387-537
               

               Cow position:
               chr2:32453554-32453400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               10, 108
               

               Conread position:
               388-530
               

               Cow position:
               chr2:21955115-21955258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr2:15162723-15162875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               54, 106
               

               Conread position:
               388-537
               

               Cow position:
               chr2:33659725-33659570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr2:39832370-39832518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               10, 127
               

               Conread position:
               389-536
               

               Cow position:
               chr2:49480611-49480464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               8, 82
               

               Conread position:
               389-537
               

               Cow position:
               chr2:34256317-34256172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               8, 88
               

               Conread position:
               389-537
               

               Cow position:
               chr2:40313348-40313496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 53
               

               Conread position:
               390-524
               

               Cow position:
               chr2:39499791-39499924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               8, 24
               

               Conread position:
               390-537
               

               Cow position:
               chr2:72583904-72584052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               391-537
               

               Cow position:
               chr2:42774262-42774406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               7, 36
               

               Conread position:
               392-525
               

               Cow position:
               chr2:37091671-37091804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               5, 12
               

               Conread position:
               392-537
               

               Cow position:
               chr2:58685367-58685513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               396-527
               

               Cow position:
               chr2:25084673-25084809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               396-534
               

               Cow position:
               chr2:74209343-74209211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr2:6444017-6444158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               397-536
               

               Cow position:
               chr2:36294815-36294955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               109, 91
               

               Conread position:
               397-537
               

               Cow position:
               chr2:53000501-53000639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               398-537
               

               Cow position:
               chr2:61442588-61442727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               402-537
               

               Cow position:
               chr2:17427163-17427302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               402-537
               

               Cow position:
               chr2:33596665-33596526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               413-535
               

               Cow position:
               chr2:18600656-18600534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               419-537
               

               Cow position:
               chr2:38913683-38913802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               25, 9
               

               Conread position:
               419-537
               

               Cow position:
               chr2:45435111-45435228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               428-537
               

               Cow position:
               chr2:10641562-10641671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               440-537
               

               Cow position:
               chr2:29545708-29545611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               85
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               312-536
               

               Cow position:
               chr20:21236611-21236830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               130, 9
               

               Conread position:
               313-525
               

               Cow position:
               chr20:19339937-19339719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               68, 17
               

               Conread position:
               314-537
               

               Cow position:
               chr20:220558-220782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               74, 16
               

               Conread position:
               322-537
               

               Cow position:
               chr20:25823227-25823450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               63, 157
               

               Conread position:
               327-522
               

               Cow position:
               chr20:29308559-29308353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               9, 125
               

               Conread position:
               330-513
               

               Cow position:
               chr20:12676396-12676579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               51, 8
               

               Conread position:
               330-532
               

               Cow position:
               chr20:27001342-27001554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               11, 94
               

               Conread position:
               333-537
               

               Cow position:
               chr20:23234989-23235204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               65, 103
               

               Conread position:
               334-532
               

               Cow position:
               chr20:30855799-30855592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               54, 127
               

               Conread position:
               335-524
               

               Cow position:
               chr20:7527075-7526879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               51, 107
               

               Conread position:
               339-537
               

               Cow position:
               chr20:4934101-4933897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               51, 82
               

               Conread position:
               344-535
               

               Cow position:
               chr20:19865218-19865419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               44, 87
               

               Conread position:
               345-537
               

               Cow position:
               chr20:26750241-26750040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               46, 168
               

               Conread position:
               380-532
               

               Cow position:
               chr20:6903326-6903483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               383-531
               

               Cow position:
               chr20:14679637-14679784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               14, 63
               

               Conread position:
               383-537
               

               Cow position:
               chr20:7386574-7386724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               14, 115
               

               Conread position:
               383-537
               

               Cow position:
               chr20:23163886-23163729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               14, 70
               

               Conread position:
               384-537
               

               Cow position:
               chr20:10759457-10759298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               386-520
               

               Cow position:
               chr20:34178455-34178321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               11, 118
               

               Conread position:
               387-535
               

               Cow position:
               chr20:17397241-17397093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               11, 131
               

               Conread position:
               387-537
               

               Cow position:
               chr20:25274267-25274119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               58, 17
               

               Conread position:
               388-519
               

               Cow position:
               chr20:33178497-33178362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               388-535
               

               Cow position:
               chr20:40355151-40355293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               9, 36
               

               Conread position:
               388-537
               

               Cow position:
               chr20:35924761-35924612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               9, 108
               

               Conread position:
               388-537
               

               Cow position:
               chr20:39656272-39656416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               10, 23
               

               Conread position:
               389-536
               

               Cow position:
               chr20:2456053-2456201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               389-537
               

               Cow position:
               chr20:32667993-32668144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               398-537
               

               Cow position:
               chr20:14471541-14471398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               401-537
               

               Cow position:
               chr20:14363104-14362974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               402-537
               

               Cow position:
               chr20:3105057-3105189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               403-526
               

               Cow position:
               chr20:37450586-37450712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               39, 10
               

               Conread position:
               403-537
               

               Cow position:
               chr20:8261951-8262089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               25, 119
               

               Conread position:
               406-534
               

               Cow position:
               chr20:32587401-32587526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               409-537
               

               Cow position:
               chr20:23604689-23604561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               416-537
               

               Cow position:
               chr20:35683353-35683232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               419-537
               

               Cow position:
               chr20:33962794-33962908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               421-537
               

               Cow position:
               chr20:13609011-13608895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               435-532
               

               Cow position:
               chr20:21518720-21518814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               83
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               440-537
               

               Cow position:
               chr20:7873908-7873813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               82
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               309-537
               

               Cow position:
               chr21:31004716-31004481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               312-526
               

               Cow position:
               chr21:23397893-23397663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               76, 18
               

               Conread position:
               312-531
               

               Cow position:
               chr21:34565257-34565026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               72, 18
               

               Conread position:
               312-537
               

               Cow position:
               chr21:12087545-12087790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               76, 26
               

               Conread position:
               314-535
               

               Cow position:
               chr21:35997131-35997364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               77, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr21:4276635-4276409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               84, 42
               

               Conread position:
               315-524
               

               Cow position:
               chr21:36819255-36819046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               122, 28
               

               Conread position:
               323-524
               

               Cow position:
               chr21:23478753-23478550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               58, 95
               

               Conread position:
               323-534
               

               Cow position:
               chr21:13256537-13256322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               20, 86
               

               Conread position:
               323-535
               

               Cow position:
               chr21:15239247-15239471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               327-532
               

               Cow position:
               chr21:36371454-36371672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               59, 204
               

               Conread position:
               328-531
               

               Cow position:
               chr21:26753465-26753680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               332-535
               

               Cow position:
               chr21:31200148-31200351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               83, 186
               

               Conread position:
               333-537
               

               Cow position:
               chr21:6058667-6058453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               60, 162
               

               Conread position:
               333-537
               

               Cow position:
               chr21:37848212-37848418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               155, 64
               

               Conread position:
               333-537
               

               Cow position:
               chr21:47715569-47715351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               20, 172
               

               Conread position:
               334-512
               

               Cow position:
               chr21:45923670-45923486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               10, 28
               

               Conread position:
               334-519
               

               Cow position:
               chr21:42053291-42053103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               52, 115
               

               Conread position:
               340-530
               

               Cow position:
               chr21:23801147-23800941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               41, 191
               

               Conread position:
               351-524
               

               Cow position:
               chr21:24759051-24759226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               33, 97
               

               Conread position:
               381-537
               

               Cow position:
               chr21:8184318-8184483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               14, 68
               

               Conread position:
               381-537
               

               Cow position:
               chr21:11676016-11675859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               381-537
               

               Cow position:
               chr21:18941800-18941640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               16, 5
               

               Conread position:
               381-537
               

               Cow position:
               chr21:48291019-48290864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               17, 73
               

               Conread position:
               382-537
               

               Cow position:
               chr21:31662038-31662198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               383-537
               

               Cow position:
               chr21:4723518-4723675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               59, 14
               

               Conread position:
               387-537
               

               Cow position:
               chr21:9353487-9353642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               388-531
               

               Cow position:
               chr21:24698521-24698669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               388-535
               

               Cow position:
               chr21:6316258-6316405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               10, 125
               

               Conread position:
               388-537
               

               Cow position:
               chr21:13418190-13418040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr21:31576537-31576686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr21:37718402-37718255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               9, 30
               

               Conread position:
               393-537
               

               Cow position:
               chr21:27480495-27480639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               105, 49
               

               Conread position:
               396-537
               

               Cow position:
               chr21:4098922-4099064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr21:33947200-33947059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               398-537
               

               Cow position:
               chr21:18782291-18782425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               399-537
               

               Cow position:
               chr21:49654122-49654262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               22, 126
               

               Conread position:
               413-537
               

               Cow position:
               chr21:17807067-17806943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               416-530
               

               Cow position:
               chr21:9588299-9588411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               420-537
               

               Cow position:
               chr21:37121133-37121018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               423-534
               

               Cow position:
               chr21:47823189-47823077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               425-536
               

               Cow position:
               chr21:8282350-8282456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               435-537
               

               Cow position:
               chr21:30150149-30150049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               87
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               440-532
               

               Cow position:
               chr21:23974178-23974087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               81
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               311-537
               

               Cow position:
               chr22:26941681-26941917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               57, 19
               

               Conread position:
               313-532
               

               Cow position:
               chr22:4753855-4753634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               83, 33
               

               Conread position:
               314-493
               

               Cow position:
               chr22:33918010-33917833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               14, 83
               

               Conread position:
               314-534
               

               Cow position:
               chr22:7301943-7301715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               75, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr22:33386617-33386382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               74, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr22:45291223-45291448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               13, 72
               

               Conread position:
               316-524
               

               Cow position:
               chr22:4161721-4161506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               71, 137
               

               Conread position:
               319-519
               

               Cow position:
               chr22:42933586-42933382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               66, 11
               

               Conread position:
               321-524
               

               Cow position:
               chr22:39601305-39601515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               65, 93
               

               Conread position:
               321-537
               

               Cow position:
               chr22:15398681-15398450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               60, 164
               

               Conread position:
               327-535
               

               Cow position:
               chr22:23861249-23861030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               13, 36
               

               Conread position:
               330-521
               

               Cow position:
               chr22:10683755-10683567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               60, 8
               

               Conread position:
               330-537
               

               Cow position:
               chr22:9466515-9466738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               23, 8
               

               Conread position:
               330-537
               

               Cow position:
               chr22:13057791-13057579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               84, 8
               

               Conread position:
               333-532
               

               Cow position:
               chr22:25476968-25477169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               108, 23
               

               Conread position:
               333-535
               

               Cow position:
               chr22:13235446-13235645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               132, 63
               

               Conread position:
               333-537
               

               Cow position:
               chr22:4651088-4651305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               333-537
               

               Cow position:
               chr22:41389022-41389234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               23, 86
               

               Conread position:
               334-535
               

               Cow position:
               chr22:19040458-19040241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               52, 120
               

               Conread position:
               335-524
               

               Cow position:
               chr22:7979612-7979807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               380-535
               

               Cow position:
               chr22:18486957-18486804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               380-537
               

               Cow position:
               chr22:15358211-15358373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               381-533
               

               Cow position:
               chr22:44924091-44923934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               17, 138
               

               Conread position:
               383-537
               

               Cow position:
               chr22:13187850-13188010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               383-537
               

               Cow position:
               chr22:14118949-14119104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               383-537
               

               Cow position:
               chr22:22997447-22997604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               59, 19
               

               Conread position:
               385-535
               

               Cow position:
               chr22:13274455-13274606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               386-532
               

               Cow position:
               chr22:15424107-15424261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               386-532
               

               Cow position:
               chr22:26057352-26057502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               11, 29
               

               Conread position:
               387-535
               

               Cow position:
               chr22:42946076-42945923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               8, 148
               

               Conread position:
               388-503
               

               Cow position:
               chr22:26376244-26376359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               9, 80
               

               Conread position:
               388-528
               

               Cow position:
               chr22:32221616-32221756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               9, 71
               

               Conread position:
               388-532
               

               Cow position:
               chr22:34675497-34675642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr22:10649803-10649653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               9, 19
               

               Conread position:
               388-537
               

               Cow position:
               chr22:31192599-31192450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               13, 77
               

               Conread position:
               388-537
               

               Cow position:
               chr22:43262432-43262581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               389-536
               

               Cow position:
               chr22:29868631-29868483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               390-537
               

               Cow position:
               chr22:39983221-39983069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               396-524
               

               Cow position:
               chr22:27669477-27669354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               396-531
               

               Cow position:
               chr22:21650153-21650290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr22:17780743-17780603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               397-537
               

               Cow position:
               chr22:2913263-2913404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               45, 23
               

               Conread position:
               401-536
               

               Cow position:
               chr22:22999581-22999718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               36, 93
               

               Conread position:
               403-529
               

               Cow position:
               chr22:23037757-23037632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               413-537
               

               Cow position:
               chr22:6859230-6859109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               413-537
               

               Cow position:
               chr22:32690435-32690313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               419-531
               

               Cow position:
               chr22:29231187-29231073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               419-537
               

               Cow position:
               chr22:32053383-32053501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               421-537
               

               Cow position:
               chr22:1277078-1277197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 67
               

               Conread position:
               432-532
               

               Cow position:
               chr22:17074393-17074492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               83
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               434-537
               

               Cow position:
               chr22:2135800-2135900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               440-537
               

               Cow position:
               chr22:23751150-23751053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               81
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               445-536
               

               Cow position:
               chr22:33768164-33768255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               80
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               288-530
               

               Cow position:
               chr23:8930257-8930011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               7, 25
               

               Conread position:
               301-530
               

               Cow position:
               chr23:23192269-23192030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               94, 37
               

               Conread position:
               312-537
               

               Cow position:
               chr23:30307803-30308041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               63, 25
               

               Conread position:
               314-519
               

               Cow position:
               chr23:22588370-22588164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               50, 16
               

               Conread position:
               315-526
               

               Cow position:
               chr23:40526081-40525861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               319-537
               

               Cow position:
               chr23:16793499-16793715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               323-527
               

               Cow position:
               chr23:9711680-9711472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               324-499
               

               Cow position:
               chr23:22418900-22419078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               10, 24
               

               Conread position:
               324-524
               

               Cow position:
               chr23:32063460-32063259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               55, 20
               

               Conread position:
               324-537
               

               Cow position:
               chr23:20585796-20585568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               325-524
               

               Cow position:
               chr23:1203811-1203607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               19, 98
               

               Conread position:
               325-537
               

               Cow position:
               chr23:27988945-27989150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               61, 13
               

               Conread position:
               326-524
               

               Cow position:
               chr23:28350017-28349826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               19, 83
               

               Conread position:
               330-519
               

               Cow position:
               chr23:9641508-9641318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               330-532
               

               Cow position:
               chr23:16237341-16237128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               68, 8
               

               Conread position:
               330-535
               

               Cow position:
               chr23:4955950-4956150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               330-537
               

               Cow position:
               chr23:40651554-40651339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               332-497
               

               Cow position:
               chr23:23974850-23975003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               66, 24
               

               Conread position:
               333-537
               

               Cow position:
               chr23:28721305-28721105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               8, 37
               

               Conread position:
               335-537
               

               Cow position:
               chr23:30773763-30773566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               80, 51
               

               Conread position:
               380-537
               

               Cow position:
               chr23:14126543-14126697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               381-537
               

               Cow position:
               chr23:1717577-1717416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               383-517
               

               Cow position:
               chr23:18495775-18495909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 113
               

               Conread position:
               383-537
               

               Cow position:
               chr23:19636284-19636130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               91, 30
               

               Conread position:
               383-537
               

               Cow position:
               chr23:35155350-35155507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               57, 87
               

               Conread position:
               383-537
               

               Cow position:
               chr23:35498049-35497894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               19, 121
               

               Conread position:
               383-537
               

               Cow position:
               chr23:37224091-37223940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               384-530
               

               Cow position:
               chr23:11434282-11434134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               386-526
               

               Cow position:
               chr23:29393412-29393554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               388-505
               

               Cow position:
               chr23:41589936-41589821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 52
               

               Conread position:
               388-532
               

               Cow position:
               chr23:13319924-13320065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               10, 47
               

               Conread position:
               388-532
               

               Cow position:
               chr23:35362798-35362650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr23:21276041-21275884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr23:26217544-26217693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               9, 61
               

               Conread position:
               388-537
               

               Cow position:
               chr23:28894975-28894822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 36
               

               Conread position:
               390-537
               

               Cow position:
               chr23:6667448-6667584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               7, 22
               

               Conread position:
               390-537
               

               Cow position:
               chr23:18326790-18326937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               9, 37
               

               Conread position:
               393-537
               

               Cow position:
               chr23:13359812-13359959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               396-531
               

               Cow position:
               chr23:40862334-40862474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               397-536
               

               Cow position:
               chr23:22660593-22660457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               400-537
               

               Cow position:
               chr23:7611260-7611394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               414-537
               

               Cow position:
               chr23:19791985-19792108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               415-537
               

               Cow position:
               chr23:30210337-30210215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               421-530
               

               Cow position:
               chr23:23470927-23471035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               434-528
               

               Cow position:
               chr23:10066440-10066346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               81
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               434-537
               

               Cow position:
               chr23:1550908-1551010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               453-537
               

               Cow position:
               chr23:18967839-18967755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               85
               

               Alignm identity:
               75
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               311-537
               

               Cow position:
               chr24:1272007-1271783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               74, 8
               

               Conread position:
               312-534
               

               Cow position:
               chr24:39681719-39681955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               28, 18
               

               Conread position:
               313-521
               

               Cow position:
               chr24:35429605-35429398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               67, 17
               

               Conread position:
               313-532
               

               Cow position:
               chr24:32758891-32758661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               87, 17
               

               Conread position:
               313-532
               

               Cow position:
               chr24:39742693-39742916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               8, 53
               

               Conread position:
               314-505
               

               Cow position:
               chr24:27683569-27683382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               82, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr24:11201775-11201541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               76, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr24:40091705-40091475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               70, 16
               

               Conread position:
               315-535
               

               Cow position:
               chr24:35569054-35569280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               73, 15
               

               Conread position:
               325-530
               

               Cow position:
               chr24:16055621-16055412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               325-537
               

               Cow position:
               chr24:42943232-42943013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               65, 180
               

               Conread position:
               330-535
               

               Cow position:
               chr24:19611894-19612111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               56, 8
               

               Conread position:
               332-530
               

               Cow position:
               chr24:33290417-33290221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               39, 16
               

               Conread position:
               333-524
               

               Cow position:
               chr24:28724321-28724509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               11, 26
               

               Conread position:
               333-530
               

               Cow position:
               chr24:25677924-25678123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               48, 88
               

               Conread position:
               333-532
               

               Cow position:
               chr24:26455726-26455943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               334-504
               

               Cow position:
               chr24:35529807-35529981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               375-527
               

               Cow position:
               chr24:28279564-28279721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               380-537
               

               Cow position:
               chr24:17981135-17981291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               9, 67
               

               Conread position:
               381-526
               

               Cow position:
               chr24:18786971-18786828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               16, 109
               

               Conread position:
               381-537
               

               Cow position:
               chr24:19754522-19754678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               16, 125
               

               Conread position:
               383-537
               

               Cow position:
               chr24:31258387-31258232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               383-537
               

               Cow position:
               chr24:31378704-31378856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               14, 58
               

               Conread position:
               384-523
               

               Cow position:
               chr24:32085980-32085838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               12, 96
               

               Conread position:
               388-532
               

               Cow position:
               chr24:35827690-35827838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               9, 129
               

               Conread position:
               388-536
               

               Cow position:
               chr24:24311460-24311606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr24:6507814-6507664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr24:32158320-32158169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr24:36801333-36801482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               9, 79
               

               Conread position:
               389-532
               

               Cow position:
               chr24:40809407-40809264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               66, 121
               

               Conread position:
               389-537
               

               Cow position:
               chr24:28335608-28335456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               390-530
               

               Cow position:
               chr24:41963143-41963000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               392-537
               

               Cow position:
               chr24:10546030-10546176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               396-519
               

               Cow position:
               chr24:21041975-21041855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               397-505
               

               Cow position:
               chr24:18567551-18567444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               397-534
               

               Cow position:
               chr24:39123805-39123946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               410-537
               

               Cow position:
               chr24:16481327-16481208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               413-534
               

               Cow position:
               chr24:42916399-42916278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               413-537
               

               Cow position:
               chr24:36497753-36497630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               416-525
               

               Cow position:
               chr24:44187522-44187635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               418-500
               

               Cow position:
               chr24:27154181-27154099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               83
               

               Alignm identity:
               73
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               419-537
               

               Cow position:
               chr24:10837879-10837994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               430-537
               

               Cow position:
               chr24:41332584-41332477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               431-537
               

               Cow position:
               chr24:5849376-5849270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               446-536
               

               Cow position:
               chr24:31338865-31338957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               83
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               310-537
               

               Cow position:
               chr25:6177929-6178162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               25, 90
               

               Conread position:
               312-521
               

               Cow position:
               chr25:7480098-7480310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               81, 99
               

               Conread position:
               313-537
               

               Cow position:
               chr25:22575634-22575401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               22, 182
               

               Conread position:
               314-524
               

               Cow position:
               chr25:16007685-16007896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               69, 16
               

               Conread position:
               315-537
               

               Cow position:
               chr25:18000637-18000402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               80, 15
               

               Conread position:
               319-531
               

               Cow position:
               chr25:22542912-22542691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               12, 181
               

               Conread position:
               319-537
               

               Cow position:
               chr25:27504281-27504071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               69, 11
               

               Conread position:
               324-532
               

               Cow position:
               chr25:10748595-10748377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               325-532
               

               Cow position:
               chr25:26240438-26240662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               330-514
               

               Cow position:
               chr25:14467173-14466988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               68, 8
               

               Conread position:
               330-524
               

               Cow position:
               chr25:32606415-32606210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               62, 8
               

               Conread position:
               333-532
               

               Cow position:
               chr25:12932539-12932749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               69, 42
               

               Conread position:
               333-537
               

               Cow position:
               chr25:10012137-10011932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               105, 65
               

               Conread position:
               340-537
               

               Cow position:
               chr25:16691579-16691785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               48, 161
               

               Conread position:
               341-537
               

               Cow position:
               chr25:20811455-20811245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               380-532
               

               Cow position:
               chr25:24405767-24405610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               380-537
               

               Cow position:
               chr25:26457710-26457549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               388-523
               

               Cow position:
               chr25:15358388-15358253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 36
               

               Conread position:
               388-525
               

               Cow position:
               chr25:34970440-34970579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr25:23410641-23410787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               10, 72
               

               Conread position:
               388-537
               

               Cow position:
               chr25:30021048-30021198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               391-535
               

               Cow position:
               chr25:22909879-22909734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               6, 108
               

               Conread position:
               396-504
               

               Cow position:
               chr25:13727400-13727292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               396-526
               

               Cow position:
               chr25:20624948-20624818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               397-531
               

               Cow position:
               chr25:33111983-33111853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               419-531
               

               Cow position:
               chr25:9922574-9922467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               319-532
               

               Cow position:
               chr26:19110826-19111054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               69, 11
               

               Conread position:
               323-500
               

               Cow position:
               chr26:7103113-7102935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               65, 15
               

               Conread position:
               325-535
               

               Cow position:
               chr26:17155404-17155184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               60, 177
               

               Conread position:
               327-531
               

               Cow position:
               chr26:21578159-21577959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               71, 32
               

               Conread position:
               330-537
               

               Cow position:
               chr26:29353581-29353361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               55, 8
               

               Conread position:
               333-530
               

               Cow position:
               chr26:12216797-12216988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               334-524
               

               Cow position:
               chr26:33212436-33212255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               335-524
               

               Cow position:
               chr26:33227739-33227926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               60, 51
               

               Conread position:
               344-519
               

               Cow position:
               chr26:2408785-2408601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               380-531
               

               Cow position:
               chr26:2769851-2769699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               131, 33
               

               Conread position:
               380-537
               

               Cow position:
               chr26:11567983-11567826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               18, 127
               

               Conread position:
               380-537
               

               Cow position:
               chr26:19903369-19903527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               27, 18
               

               Conread position:
               381-532
               

               Cow position:
               chr26:7955839-7955994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               16, 106
               

               Conread position:
               383-537
               

               Cow position:
               chr26:9666420-9666267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               7, 46
               

               Conread position:
               383-537
               

               Cow position:
               chr26:19935368-19935214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               14, 41
               

               Conread position:
               383-537
               

               Cow position:
               chr26:32854293-32854140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               385-502
               

               Cow position:
               chr26:8823709-8823827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               386-537
               

               Cow position:
               chr26:12520020-12520175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               387-522
               

               Cow position:
               chr26:3756219-3756355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               388-535
               

               Cow position:
               chr26:24183049-24182904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               10, 101
               

               Conread position:
               388-537
               

               Cow position:
               chr26:8651610-8651461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               9, 30
               

               Conread position:
               388-537
               

               Cow position:
               chr26:17204150-17203998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               54, 133
               

               Conread position:
               388-537
               

               Cow position:
               chr26:27585770-27585919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               10, 33
               

               Conread position:
               389-532
               

               Cow position:
               chr26:14080701-14080848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               8, 98
               

               Conread position:
               390-532
               

               Cow position:
               chr26:34119040-34118892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               390-535
               

               Cow position:
               chr26:3019419-3019272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               390-537
               

               Cow position:
               chr26:29244397-29244543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               7, 81
               

               Conread position:
               396-537
               

               Cow position:
               chr26:10137738-10137595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               46, 110
               

               Conread position:
               396-537
               

               Cow position:
               chr26:10523444-10523306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr26:14924488-14924629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               135, 113
               

               Conread position:
               396-537
               

               Cow position:
               chr26:16604289-16604434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr26:18719260-18719401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr26:30605355-30605219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               401-537
               

               Cow position:
               chr26:19768799-19768658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               408-528
               

               Cow position:
               chr26:7054011-7054130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               413-519
               

               Cow position:
               chr26:34521594-34521701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               415-537
               

               Cow position:
               chr26:7387788-7387914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               440-536
               

               Cow position:
               chr26:30385826-30385921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               81
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               310-530
               

               Cow position:
               chr27:27867619-27867829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               31, 76
               

               Conread position:
               312-532
               

               Cow position:
               chr27:13005905-13005680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               69, 18
               

               Conread position:
               312-537
               

               Cow position:
               chr27:783770-783532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               29, 174
               

               Conread position:
               313-518
               

               Cow position:
               chr27:465023-464816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               92, 131
               

               Conread position:
               314-519
               

               Cow position:
               chr27:1953049-1953246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               314-519
               

               Cow position:
               chr27:29019688-29019890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               314-537
               

               Cow position:
               chr27:25998766-25998527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               67, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr27:30365375-30365144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               55, 16
               

               Conread position:
               324-537
               

               Cow position:
               chr27:25982675-25982892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               68, 22
               

               Conread position:
               325-537
               

               Cow position:
               chr27:26441007-26441222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               61, 113
               

               Conread position:
               327-523
               

               Cow position:
               chr27:20510247-20510055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               9, 66
               

               Conread position:
               330-524
               

               Cow position:
               chr27:28107153-28107343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               330-529
               

               Cow position:
               chr27:11416496-11416285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               55, 8
               

               Conread position:
               333-505
               

               Cow position:
               chr27:11356492-11356680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               333-532
               

               Cow position:
               chr27:6884067-6883864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               333-537
               

               Cow position:
               chr27:23662562-23662767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               334-523
               

               Cow position:
               chr27:30703031-30703227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               53, 40
               

               Conread position:
               334-536
               

               Cow position:
               chr27:8048697-8048905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               52, 143
               

               Conread position:
               334-537
               

               Cow position:
               chr27:19083669-19083891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               335-522
               

               Cow position:
               chr27:26483270-26483080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               55, 83
               

               Conread position:
               335-535
               

               Cow position:
               chr27:30560958-30560753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               53, 117
               

               Conread position:
               336-537
               

               Cow position:
               chr27:21138866-21138656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               340-537
               

               Cow position:
               chr27:25970430-25970233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               44, 127
               

               Conread position:
               381-537
               

               Cow position:
               chr27:14937443-14937603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               17, 141
               

               Conread position:
               386-537
               

               Cow position:
               chr27:12247660-12247512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               11, 92
               

               Conread position:
               387-532
               

               Cow position:
               chr27:13958364-13958513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               388-535
               

               Cow position:
               chr27:16493560-16493414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               9, 90
               

               Conread position:
               388-537
               

               Cow position:
               chr27:1536740-1536901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr27:21970907-21971056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               389-537
               

               Cow position:
               chr27:21578595-21578749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               397-537
               

               Cow position:
               chr27:10119109-10119257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               400-537
               

               Cow position:
               chr27:25880068-25879928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               402-532
               

               Cow position:
               chr27:16525880-16526010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               413-537
               

               Cow position:
               chr27:11746542-11746414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               417-537
               

               Cow position:
               chr27:6347805-6347927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               419-537
               

               Cow position:
               chr27:18219341-18219223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               419-537
               

               Cow position:
               chr27:19601316-19601200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               432-537
               

               Cow position:
               chr27:21991461-21991357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               435-537
               

               Cow position:
               chr27:1899644-1899746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               83
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               435-537
               

               Cow position:
               chr27:17875214-17875316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               83
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               452-537
               

               Cow position:
               chr27:9692106-9692191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               86
               

               Alignm identity:
               75
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-476
               

               Cow position:
               chr28:10642119-10641959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               89, 16
               

               Conread position:
               315-537
               

               Cow position:
               chr28:33285214-33284974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               71, 29
               

               Conread position:
               321-532
               

               Cow position:
               chr28:21873674-21873890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               324-537
               

               Cow position:
               chr28:19253388-19253615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               62, 14
               

               Conread position:
               325-534
               

               Cow position:
               chr28:4763783-4764012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               54, 105
               

               Conread position:
               333-519
               

               Cow position:
               chr28:2898914-2899107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               60, 174
               

               Conread position:
               333-521
               

               Cow position:
               chr28:12999026-12999214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               62, 23
               

               Conread position:
               333-537
               

               Cow position:
               chr28:11500971-11500749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               51, 208
               

               Conread position:
               334-537
               

               Cow position:
               chr28:29455740-29455535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               50, 115
               

               Conread position:
               335-519
               

               Cow position:
               chr28:27659764-27659573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               7, 88
               

               Conread position:
               335-531
               

               Cow position:
               chr28:19133713-19133904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               50, 20
               

               Conread position:
               337-537
               

               Cow position:
               chr28:3823199-3823006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               340-532
               

               Cow position:
               chr28:25340205-25340401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               46, 189
               

               Conread position:
               343-537
               

               Cow position:
               chr28:31373047-31373242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               107, 10
               

               Conread position:
               350-537
               

               Cow position:
               chr28:11200937-11200755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               48, 154
               

               Conread position:
               380-505
               

               Cow position:
               chr28:13693729-13693853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               381-537
               

               Cow position:
               chr28:9821990-9821835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr28:1202259-1202109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               389-522
               

               Cow position:
               chr28:11355686-11355555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               389-524
               

               Cow position:
               chr28:13255886-13255752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               393-537
               

               Cow position:
               chr28:31165995-31165847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               396-532
               

               Cow position:
               chr28:8335952-8336092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               396-534
               

               Cow position:
               chr28:5406550-5406683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr28:6993619-6993482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               397-535
               

               Cow position:
               chr28:4274848-4274712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               417-537
               

               Cow position:
               chr28:1608206-1608327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               70, 7
               

               Conread position:
               431-537
               

               Cow position:
               chr28:22421956-22421850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               86
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               440-534
               

               Cow position:
               chr28:29393285-29393378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               81
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               440-537
               

               Cow position:
               chr28:15081883-15081786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               81
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               311-534
               

               Cow position:
               chr29:19508841-19509072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               70, 19
               

               Conread position:
               313-524
               

               Cow position:
               chr29:28993397-28993606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               85, 25
               

               Conread position:
               314-498
               

               Cow position:
               chr29:27285683-27285861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               93, 16
               

               Conread position:
               314-519
               

               Cow position:
               chr29:12451267-12451485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               68, 16
               

               Conread position:
               314-534
               

               Cow position:
               chr29:709228-709007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               124, 17
               

               Conread position:
               319-531
               

               Cow position:
               chr29:38992921-38992717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               78, 11
               

               Conread position:
               319-537
               

               Cow position:
               chr29:26129399-26129623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               62, 11
               

               Conread position:
               319-537
               

               Cow position:
               chr29:29302754-29302529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               49, 11
               

               Conread position:
               323-505
               

               Cow position:
               chr29:32644824-32645008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               74, 15
               

               Conread position:
               330-525
               

               Cow position:
               chr29:21925117-21925309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               55, 8
               

               Conread position:
               335-537
               

               Cow position:
               chr29:7407978-7407776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               11, 183
               

               Conread position:
               381-530
               

               Cow position:
               chr29:650249-650396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               42, 110
               

               Conread position:
               381-532
               

               Cow position:
               chr29:14758891-14758739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               381-537
               

               Cow position:
               chr29:7054387-7054541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               16, 113
               

               Conread position:
               383-530
               

               Cow position:
               chr29:4367695-4367848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               383-537
               

               Cow position:
               chr29:13554110-13554266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               384-537
               

               Cow position:
               chr29:1340755-1340911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               14, 101
               

               Conread position:
               384-537
               

               Cow position:
               chr29:6772104-6772258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               11, 101
               

               Conread position:
               387-532
               

               Cow position:
               chr29:25426680-25426535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               44, 104
               

               Conread position:
               388-537
               

               Cow position:
               chr29:19734645-19734790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 50
               

               Conread position:
               390-532
               

               Cow position:
               chr29:16055151-16055008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr29:18067891-18068033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               36, 115
               

               Conread position:
               397-537
               

               Cow position:
               chr29:18072929-18073068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               397-537
               

               Cow position:
               chr29:18963719-18963863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               401-530
               

               Cow position:
               chr29:5976795-5976667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               402-537
               

               Cow position:
               chr29:11766711-11766845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               403-537
               

               Cow position:
               chr29:24323644-24323779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               7, 106
               

               Conread position:
               420-537
               

               Cow position:
               chr29:7637547-7637430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               421-534
               

               Cow position:
               chr29:23742254-23742138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               5, 73
               

               Conread position:
               434-537
               

               Cow position:
               chr29:11071659-11071556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               440-537
               

               Cow position:
               chr29:32080578-32080675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               81
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               293-537
               

               Cow position:
               chr3:23111661-23111406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               19, 27
               

               Conread position:
               304-524
               

               Cow position:
               chr3:53538377-53538605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               7, 152
               

               Conread position:
               311-518
               

               Cow position:
               chr3:17742369-17742578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               20, 8
               

               Conread position:
               311-526
               

               Cow position:
               chr3:53091357-53091582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               70, 19
               

               Conread position:
               313-532
               

               Cow position:
               chr3:70354361-70354137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               15, 45
               

               Conread position:
               314-520
               

               Cow position:
               chr3:58865589-58865384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               76, 16
               

               Conread position:
               314-524
               

               Cow position:
               chr3:71135663-71135880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               67, 16
               

               Conread position:
               314-532
               

               Cow position:
               chr3:34086167-34085954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               83, 16
               

               Conread position:
               314-533
               

               Cow position:
               chr3:54862546-54862317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               67, 23
               

               Conread position:
               314-537
               

               Cow position:
               chr3:1300104-1300322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               89, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr3:20092644-20092419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               173
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               73, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr3:22953993-22953777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               27, 82
               

               Conread position:
               314-537
               

               Cow position:
               chr3:53588516-53588278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               74, 16
               

               Conread position:
               315-532
               

               Cow position:
               chr3:46094702-46094923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               101, 160
               

               Conread position:
               315-536
               

               Cow position:
               chr3:37451939-37452175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               65, 23
               

               Conread position:
               319-518
               

               Cow position:
               chr3:66738653-66738846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               63, 11
               

               Conread position:
               323-530
               

               Cow position:
               chr3:51255666-51255879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               58, 15
               

               Conread position:
               323-532
               

               Cow position:
               chr3:25090921-25091131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               19, 40
               

               Conread position:
               323-536
               

               Cow position:
               chr3:32597049-32596839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               69, 20
               

               Conread position:
               325-524
               

               Cow position:
               chr3:83396076-83396275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               65, 13
               

               Conread position:
               325-534
               

               Cow position:
               chr3:20471484-20471261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               61, 35
               

               Conread position:
               325-537
               

               Cow position:
               chr3:8923924-8924147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               65, 174
               

               Conread position:
               326-537
               

               Cow position:
               chr3:4329223-4329426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               71, 23
               

               Conread position:
               327-515
               

               Cow position:
               chr3:62884085-62884288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               330-523
               

               Cow position:
               chr3:82473943-82474133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               67, 8
               

               Conread position:
               330-524
               

               Cow position:
               chr3:17284729-17284921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               330-524
               

               Cow position:
               chr3:35018958-35018773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               68, 56
               

               Conread position:
               330-524
               

               Cow position:
               chr3:58350472-58350665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               59, 87
               

               Conread position:
               330-524
               

               Cow position:
               chr3:73777169-73777364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               56, 8
               

               Conread position:
               330-532
               

               Cow position:
               chr3:22271547-22271353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               68, 8
               

               Conread position:
               330-534
               

               Cow position:
               chr3:29507474-29507685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               27, 43
               

               Conread position:
               330-537
               

               Cow position:
               chr3:23476887-23477097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               58, 8
               

               Conread position:
               330-537
               

               Cow position:
               chr3:25250794-25251011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               53, 8
               

               Conread position:
               330-537
               

               Cow position:
               chr3:52835998-52835774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               333-523
               

               Cow position:
               chr3:20405687-20405878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               21, 78
               

               Conread position:
               333-524
               

               Cow position:
               chr3:33633007-33632815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               11, 110
               

               Conread position:
               333-531
               

               Cow position:
               chr3:61322730-61322941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               333-532
               

               Cow position:
               chr3:13909400-13909599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               53, 19
               

               Conread position:
               333-532
               

               Cow position:
               chr3:73741968-73741768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               51, 23
               

               Conread position:
               333-534
               

               Cow position:
               chr3:8457541-8457758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               333-537
               

               Cow position:
               chr3:23092091-23091872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               53, 177
               

               Conread position:
               333-537
               

               Cow position:
               chr3:36204442-36204659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               57, 32
               

               Conread position:
               333-537
               

               Cow position:
               chr3:54340525-54340316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               50, 38
               

               Conread position:
               334-522
               

               Cow position:
               chr3:26493333-26493139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               334-524
               

               Cow position:
               chr3:74561523-74561330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               11, 115
               

               Conread position:
               335-523
               

               Cow position:
               chr3:4223202-4223392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               52, 95
               

               Conread position:
               345-537
               

               Cow position:
               chr3:58286000-58285802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               40, 132
               

               Conread position:
               346-525
               

               Cow position:
               chr3:66145814-66145994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               44, 95
               

               Conread position:
               346-537
               

               Cow position:
               chr3:30839160-30839349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               51, 98
               

               Conread position:
               380-536
               

               Cow position:
               chr3:55373620-55373463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               380-537
               

               Cow position:
               chr3:14505970-14505808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               380-537
               

               Cow position:
               chr3:74205860-74205702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               381-532
               

               Cow position:
               chr3:41550429-41550274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               16, 121
               

               Conread position:
               383-505
               

               Cow position:
               chr3:15684974-15684847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               15, 32
               

               Conread position:
               383-532
               

               Cow position:
               chr3:9074398-9074244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               383-536
               

               Cow position:
               chr3:39911106-39910954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               383-537
               

               Cow position:
               chr3:61411076-61411227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               385-537
               

               Cow position:
               chr3:51146716-51146565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               12, 33
               

               Conread position:
               387-535
               

               Cow position:
               chr3:50462292-50462441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               387-537
               

               Cow position:
               chr3:50281798-50281645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               36, 16
               

               Conread position:
               388-530
               

               Cow position:
               chr3:8752740-8752886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               10, 111
               

               Conread position:
               388-532
               

               Cow position:
               chr3:58448106-58447964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               388-535
               

               Cow position:
               chr3:9629840-9629985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               10, 84
               

               Conread position:
               388-537
               

               Cow position:
               chr3:3736251-3736406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr3:10431557-10431706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               9, 53
               

               Conread position:
               388-537
               

               Cow position:
               chr3:41718349-41718498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               9, 53
               

               Conread position:
               388-537
               

               Cow position:
               chr3:58174861-58175006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 112
               

               Conread position:
               388-537
               

               Cow position:
               chr3:73436488-73436334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr3:74611520-74611670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr3:77490532-77490676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               389-532
               

               Cow position:
               chr3:31933142-31932998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               389-537
               

               Cow position:
               chr3:6690209-6690357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               9, 43
               

               Conread position:
               390-532
               

               Cow position:
               chr3:18214185-18214034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               392-505
               

               Cow position:
               chr3:44861351-44861237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               393-521
               

               Cow position:
               chr3:66708108-66707976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               395-524
               

               Cow position:
               chr3:49428020-49427891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               395-531
               

               Cow position:
               chr3:58632527-58632662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               396-535
               

               Cow position:
               chr3:27532692-27532550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               47, 27
               

               Conread position:
               396-537
               

               Cow position:
               chr3:5419898-5419757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr3:15221556-15221411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr3:25076205-25076060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               397-534
               

               Cow position:
               chr3:59608465-59608606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               397-537
               

               Cow position:
               chr3:891231-891371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               397-537
               

               Cow position:
               chr3:55991902-55991762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               70, 121
               

               Conread position:
               400-534
               

               Cow position:
               chr3:11920066-11919933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               41, 90
               

               Conread position:
               401-537
               

               Cow position:
               chr3:24538843-24538979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               406-497
               

               Cow position:
               chr3:77191033-77191123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               79
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               411-537
               

               Cow position:
               chr3:24300337-24300467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               413-532
               

               Cow position:
               chr3:58291910-58291791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               413-537
               

               Cow position:
               chr3:5844902-5845025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               414-537
               

               Cow position:
               chr3:43654130-43654012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               417-532
               

               Cow position:
               chr3:31750258-31750370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               419-519
               

               Cow position:
               chr3:61116415-61116316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               420-521
               

               Cow position:
               chr3:20158385-20158486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               24, 80
               

               Conread position:
               421-537
               

               Cow position:
               chr3:34315831-34315716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               426-537
               

               Cow position:
               chr3:62628268-62628158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               428-537
               

               Cow position:
               chr3:25027399-25027508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               431-536
               

               Cow position:
               chr3:84112580-84112475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               432-537
               

               Cow position:
               chr3:74912855-74912960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               286-532
               

               Cow position:
               chr4:21250172-21249909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               49, 9
               

               Conread position:
               312-537
               

               Cow position:
               chr4:20279218-20279450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               59, 74
               

               Conread position:
               313-535
               

               Cow position:
               chr4:30671527-30671294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               9, 145
               

               Conread position:
               314-499
               

               Cow position:
               chr4:12667453-12667267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               44, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr4:9845803-9846036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               68, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr4:31172561-31172795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               72, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr4:50769879-50769642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               74, 16
               

               Conread position:
               315-525
               

               Cow position:
               chr4:5553902-5553685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               5, 16
               

               Conread position:
               315-537
               

               Cow position:
               chr4:23311371-23311147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               5, 16
               

               Conread position:
               319-531
               

               Cow position:
               chr4:54146572-54146350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               69, 11
               

               Conread position:
               319-537
               

               Cow position:
               chr4:30131237-30131458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               319-537
               

               Cow position:
               chr4:62411769-62411975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               323-534
               

               Cow position:
               chr4:26373763-26373555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               119, 22
               

               Conread position:
               325-519
               

               Cow position:
               chr4:60783940-60784134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               65, 72
               

               Conread position:
               325-528
               

               Cow position:
               chr4:22115503-22115717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               62, 209
               

               Conread position:
               325-529
               

               Cow position:
               chr4:37880827-37881050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               330-523
               

               Cow position:
               chr4:7213681-7213489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               58, 8
               

               Conread position:
               330-524
               

               Cow position:
               chr4:24497916-24497719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               65, 8
               

               Conread position:
               330-537
               

               Cow position:
               chr4:23758706-23758926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               56, 8
               

               Conread position:
               330-537
               

               Cow position:
               chr4:39767252-39767472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               51, 8
               

               Conread position:
               330-537
               

               Cow position:
               chr4:48499741-48499939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               332-537
               

               Cow position:
               chr4:23166807-23167025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               54, 126
               

               Conread position:
               333-518
               

               Cow position:
               chr4:58576448-58576263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               64, 114
               

               Conread position:
               334-518
               

               Cow position:
               chr4:23494828-23495026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               334-530
               

               Cow position:
               chr4:10992294-10992085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               334-531
               

               Cow position:
               chr4:7315136-7315330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               100, 51
               

               Conread position:
               340-537
               

               Cow position:
               chr4:9547887-9548075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               342-522
               

               Cow position:
               chr4:59833857-59834034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               116, 44
               

               Conread position:
               361-537
               

               Cow position:
               chr4:24432926-24433102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               78, 42
               

               Conread position:
               380-534
               

               Cow position:
               chr4:68795330-68795175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               62, 35
               

               Conread position:
               380-537
               

               Cow position:
               chr4:22249485-22249326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               380-537
               

               Cow position:
               chr4:53752487-53752644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 150
               

               Conread position:
               382-529
               

               Cow position:
               chr4:5797929-5798081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               382-530
               

               Cow position:
               chr4:20066255-20066106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               15, 116
               

               Conread position:
               383-535
               

               Cow position:
               chr4:19307225-19307374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 77
               

               Conread position:
               383-537
               

               Cow position:
               chr4:2121432-2121276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               383-537
               

               Cow position:
               chr4:52225972-52226126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               58, 24
               

               Conread position:
               384-537
               

               Cow position:
               chr4:36813342-36813501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               387-530
               

               Cow position:
               chr4:44279967-44279820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               387-530
               

               Cow position:
               chr4:60030874-60031019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               10, 106
               

               Conread position:
               387-537
               

               Cow position:
               chr4:36945224-36945071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               388-532
               

               Cow position:
               chr4:5913377-5913228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               388-532
               

               Cow position:
               chr4:65604499-65604355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               45, 125
               

               Conread position:
               388-535
               

               Cow position:
               chr4:24415535-24415681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               9, 44
               

               Conread position:
               388-536
               

               Cow position:
               chr4:18439596-18439447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr4:1799879-1800028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               9, 135
               

               Conread position:
               388-537
               

               Cow position:
               chr4:27371889-27371740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               389-537
               

               Cow position:
               chr4:5002735-5002887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               390-531
               

               Cow position:
               chr4:10837409-10837265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               7, 71
               

               Conread position:
               390-532
               

               Cow position:
               chr4:17304422-17304275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               392-537
               

               Cow position:
               chr4:59719583-59719725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               23, 36
               

               Conread position:
               396-535
               

               Cow position:
               chr4:65406387-65406253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr4:21365387-21365525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr4:22528405-22528264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr4:24755546-24755686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               72, 11
               

               Conread position:
               396-537
               

               Cow position:
               chr4:40623119-40622979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               397-529
               

               Cow position:
               chr4:40433923-40433787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               9, 17
               

               Conread position:
               397-537
               

               Cow position:
               chr4:3267883-3267745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               35, 124
               

               Conread position:
               413-523
               

               Cow position:
               chr4:59888621-59888512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               413-524
               

               Cow position:
               chr4:33681962-33682072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               413-534
               

               Cow position:
               chr4:35471317-35471437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               413-537
               

               Cow position:
               chr4:17478300-17478180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               90, 7
               

               Conread position:
               417-537
               

               Cow position:
               chr4:63417698-63417578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               432-537
               

               Cow position:
               chr4:20161466-20161359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               458-537
               

               Cow position:
               chr4:37611242-37611163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               80
               

               Alignm identity:
               72
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               298-537
               

               Cow position:
               chr5:18128002-18128242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               25, 41
               

               Conread position:
               309-537
               

               Cow position:
               chr5:3649543-3649305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               312-522
               

               Cow position:
               chr5:13906784-13906995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               85, 135
               

               Conread position:
               313-522
               

               Cow position:
               chr5:44417433-44417220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               9, 74
               

               Conread position:
               313-526
               

               Cow position:
               chr5:33265539-33265320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               73, 17
               

               Conread position:
               314-519
               

               Cow position:
               chr5:26046254-26046461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               69, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr5:50425556-50425331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               30, 102
               

               Conread position:
               314-537
               

               Cow position:
               chr5:51502929-51503160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               74, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr5:64398930-64399165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               181
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               315-505
               

               Cow position:
               chr5:68481156-68481347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               5, 16
               

               Conread position:
               319-505
               

               Cow position:
               chr5:55989670-55989865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               63, 11
               

               Conread position:
               319-524
               

               Cow position:
               chr5:24361455-24361656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               72, 11
               

               Conread position:
               319-537
               

               Cow position:
               chr5:27615439-27615669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               65, 11
               

               Conread position:
               320-535
               

               Cow position:
               chr5:67150089-67149863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               321-531
               

               Cow position:
               chr5:69773493-69773694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               77, 47
               

               Conread position:
               323-525
               

               Cow position:
               chr5:17869614-17869830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               12, 187
               

               Conread position:
               323-530
               

               Cow position:
               chr5:48143859-48143639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               323-535
               

               Cow position:
               chr5:13044466-13044257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               325-525
               

               Cow position:
               chr5:4631048-4631246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               90, 59
               

               Conread position:
               325-537
               

               Cow position:
               chr5:41605864-41605655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               65, 98
               

               Conread position:
               326-524
               

               Cow position:
               chr5:19905338-19905139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               327-518
               

               Cow position:
               chr5:72042154-72042342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               327-537
               

               Cow position:
               chr5:73526307-73526523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               330-524
               

               Cow position:
               chr5:18104208-18104004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               14, 198
               

               Conread position:
               330-531
               

               Cow position:
               chr5:34184163-34184374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               51, 8
               

               Conread position:
               330-537
               

               Cow position:
               chr5:23641055-23640860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               330-537
               

               Cow position:
               chr5:56385164-56385370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               117, 8
               

               Conread position:
               333-521
               

               Cow position:
               chr5:46294728-46294548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               82, 51
               

               Conread position:
               333-523
               

               Cow position:
               chr5:43110500-43110692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               54, 85
               

               Conread position:
               333-526
               

               Cow position:
               chr5:61488172-61487966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               333-530
               

               Cow position:
               chr5:17028029-17028245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               333-532
               

               Cow position:
               chr5:17267958-17267740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               333-535
               

               Cow position:
               chr5:27411461-27411246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               333-537
               

               Cow position:
               chr5:18695114-18695317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               80, 64
               

               Conread position:
               333-537
               

               Cow position:
               chr5:47681070-47680861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               334-525
               

               Cow position:
               chr5:26376488-26376689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               11, 90
               

               Conread position:
               334-531
               

               Cow position:
               chr5:4927629-4927416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               50, 132
               

               Conread position:
               334-537
               

               Cow position:
               chr5:41604562-41604780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               345-505
               

               Cow position:
               chr5:2267206-2267372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               378-532
               

               Cow position:
               chr5:1349799-1349640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               62, 115
               

               Conread position:
               380-524
               

               Cow position:
               chr5:36024578-36024434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               17, 66
               

               Conread position:
               381-531
               

               Cow position:
               chr5:22839474-22839329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               16, 108
               

               Conread position:
               381-537
               

               Cow position:
               chr5:49567425-49567580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               16, 103
               

               Conread position:
               383-532
               

               Cow position:
               chr5:63328894-63328742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               14, 37
               

               Conread position:
               383-537
               

               Cow position:
               chr5:30332952-30333107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               385-537
               

               Cow position:
               chr5:54532989-54533141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               18, 133
               

               Conread position:
               386-534
               

               Cow position:
               chr5:3752858-3753005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               386-535
               

               Cow position:
               chr5:34279602-34279452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               387-530
               

               Cow position:
               chr5:30978360-30978503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               388-519
               

               Cow position:
               chr5:6896121-6895988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               388-535
               

               Cow position:
               chr5:14154155-14154302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               388-535
               

               Cow position:
               chr5:40711433-40711292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               9, 116
               

               Conread position:
               388-537
               

               Cow position:
               chr5:21531102-21530948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               10, 26
               

               Conread position:
               388-537
               

               Cow position:
               chr5:23366761-23366608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               9, 30
               

               Conread position:
               388-537
               

               Cow position:
               chr5:49656018-49655871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               9, 101
               

               Conread position:
               396-531
               

               Cow position:
               chr5:36487683-36487544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               39, 17
               

               Conread position:
               396-532
               

               Cow position:
               chr5:58343870-58344010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               396-535
               

               Cow position:
               chr5:20572065-20572203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               396-535
               

               Cow position:
               chr5:41636883-41637019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr5:39442309-39442453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               46, 114
               

               Conread position:
               397-523
               

               Cow position:
               chr5:63188310-63188184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               397-537
               

               Cow position:
               chr5:1343837-1343700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               397-537
               

               Cow position:
               chr5:38629303-38629443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               400-534
               

               Cow position:
               chr5:58748786-58748923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               402-531
               

               Cow position:
               chr5:21195100-21194972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               402-532
               

               Cow position:
               chr5:36028126-36027995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               42, 11
               

               Conread position:
               413-532
               

               Cow position:
               chr5:2819290-2819410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               413-532
               

               Cow position:
               chr5:21356857-21356738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               30, 105
               

               Conread position:
               413-535
               

               Cow position:
               chr5:38936557-38936439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               413-537
               

               Cow position:
               chr5:3225943-3225823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               417-532
               

               Cow position:
               chr5:27293632-27293518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               419-537
               

               Cow position:
               chr5:3058958-3059076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               420-537
               

               Cow position:
               chr5:41907069-41907186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               428-537
               

               Cow position:
               chr5:17097759-17097867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               432-537
               

               Cow position:
               chr5:39753603-39753498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               435-537
               

               Cow position:
               chr5:75687270-75687169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               310-537
               

               Cow position:
               chr6:29412840-29412618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               18, 49
               

               Conread position:
               311-532
               

               Cow position:
               chr6:2582801-2583025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               89, 19
               

               Conread position:
               311-532
               

               Cow position:
               chr6:20255468-20255241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               92, 26
               

               Conread position:
               311-536
               

               Cow position:
               chr6:20754366-20754132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               30, 12
               

               Conread position:
               312-537
               

               Cow position:
               chr6:15997289-15997048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               23, 227
               

               Conread position:
               313-524
               

               Cow position:
               chr6:37739121-37739331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               73, 17
               

               Conread position:
               314-514
               

               Cow position:
               chr6:56860483-56860697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               66, 16
               

               Conread position:
               314-519
               

               Cow position:
               chr6:57119004-57118789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               77, 7
               

               Conread position:
               314-522
               

               Cow position:
               chr6:16634284-16634071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               72, 16
               

               Conread position:
               314-522
               

               Cow position:
               chr6:59249748-59249544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               83, 16
               

               Conread position:
               314-527
               

               Cow position:
               chr6:15025955-15025732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               72, 30
               

               Conread position:
               314-535
               

               Cow position:
               chr6:19427387-19427619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               67, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr6:24557815-24558048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               70, 17
               

               Conread position:
               314-537
               

               Cow position:
               chr6:47327132-47326909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               74, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr6:59588473-59588238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               84, 16
               

               Conread position:
               319-520
               

               Cow position:
               chr6:20379531-20379325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               37, 11
               

               Conread position:
               319-537
               

               Cow position:
               chr6:37612048-37612276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               63, 78
               

               Conread position:
               321-502
               

               Cow position:
               chr6:7253194-7253005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               321-530
               

               Cow position:
               chr6:38914385-38914604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               60, 37
               

               Conread position:
               324-521
               

               Cow position:
               chr6:7835857-7836069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               324-532
               

               Cow position:
               chr6:24649796-24650010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               85, 19
               

               Conread position:
               324-536
               

               Cow position:
               chr6:9454232-9454453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               64, 14
               

               Conread position:
               327-535
               

               Cow position:
               chr6:37053948-37054152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               330-519
               

               Cow position:
               chr6:55842208-55842011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               58, 8
               

               Conread position:
               333-520
               

               Cow position:
               chr6:50271146-50270958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               48, 31
               

               Conread position:
               334-522
               

               Cow position:
               chr6:28137602-28137793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               335-537
               

               Cow position:
               chr6:65871845-65872059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               53, 9
               

               Conread position:
               339-537
               

               Cow position:
               chr6:54062618-54062836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               343-522
               

               Cow position:
               chr6:16781784-16781598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               43, 113
               

               Conread position:
               346-524
               

               Cow position:
               chr6:35703225-35703051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               51, 46
               

               Conread position:
               380-531
               

               Cow position:
               chr6:24622964-24622809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               380-532
               

               Cow position:
               chr6:28795345-28795504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               381-524
               

               Cow position:
               chr6:50318030-50317887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               16, 31
               

               Conread position:
               381-534
               

               Cow position:
               chr6:24583212-24583064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               18, 58
               

               Conread position:
               382-535
               

               Cow position:
               chr6:59496229-59496387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               15, 94
               

               Conread position:
               383-535
               

               Cow position:
               chr6:55475266-55475424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               383-537
               

               Cow position:
               chr6:13718775-13718934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               383-537
               

               Cow position:
               chr6:32798857-32798702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               15, 38
               

               Conread position:
               385-535
               

               Cow position:
               chr6:41041941-41042087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               10, 41
               

               Conread position:
               386-537
               

               Cow position:
               chr6:54144322-54144473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               388-526
               

               Cow position:
               chr6:9026540-9026679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr6:827686-827537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               10, 26
               

               Conread position:
               388-537
               

               Cow position:
               chr6:1890560-1890407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               10, 26
               

               Conread position:
               388-537
               

               Cow position:
               chr6:30160342-30160488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               9, 23
               

               Conread position:
               388-537
               

               Cow position:
               chr6:31425543-31425387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               10, 26
               

               Conread position:
               388-537
               

               Cow position:
               chr6:50034710-50034559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               9, 107
               

               Conread position:
               388-537
               

               Cow position:
               chr6:52002376-52002525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               9, 125
               

               Conread position:
               389-537
               

               Cow position:
               chr6:10237355-10237504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               389-537
               

               Cow position:
               chr6:47858308-47858454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               8, 112
               

               Conread position:
               396-519
               

               Cow position:
               chr6:16220035-16219913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr6:15782489-15782344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr6:18469200-18469063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               397-529
               

               Cow position:
               chr6:6367640-6367509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               397-534
               

               Cow position:
               chr6:32412608-32412472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               397-537
               

               Cow position:
               chr6:16733446-16733585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               399-535
               

               Cow position:
               chr6:8318132-8317998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               402-531
               

               Cow position:
               chr6:47192493-47192361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               40, 109
               

               Conread position:
               403-537
               

               Cow position:
               chr6:6596608-6596741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               404-520
               

               Cow position:
               chr6:38895075-38894960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               419-532
               

               Cow position:
               chr6:47624830-47624717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               8, 99
               

               Conread position:
               424-537
               

               Cow position:
               chr6:53264740-53264629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               435-537
               

               Cow position:
               chr6:36892262-36892163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               440-537
               

               Cow position:
               chr6:60423267-60423172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               83
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               300-536
               

               Cow position:
               chr7:55714004-55714242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               97, 30
               

               Conread position:
               311-537
               

               Cow position:
               chr7:59245896-59246128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               67, 10
               

               Conread position:
               312-530
               

               Cow position:
               chr7:26665624-26665403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               312-534
               

               Cow position:
               chr7:21197448-21197211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               78, 18
               

               Conread position:
               313-487
               

               Cow position:
               chr7:62006241-62006061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               15, 26
               

               Conread position:
               313-524
               

               Cow position:
               chr7:48289313-48289530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               30, 184
               

               Conread position:
               313-532
               

               Cow position:
               chr7:61087372-61087597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               22, 46
               

               Conread position:
               314-522
               

               Cow position:
               chr7:20176434-20176236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               314-537
               

               Cow position:
               chr7:8826752-8826986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               74, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr7:12755213-12754983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               67, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr7:19399745-19399504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               72, 9
               

               Conread position:
               314-537
               

               Cow position:
               chr7:39603271-39603494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 16
               

               Conread position:
               315-522
               

               Cow position:
               chr7:44442715-44442505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               5, 68
               

               Conread position:
               315-524
               

               Cow position:
               chr7:57729927-57729709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 135
               

               Conread position:
               319-522
               

               Cow position:
               chr7:49395328-49395129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               73, 11
               

               Conread position:
               319-527
               

               Cow position:
               chr7:3322739-3322956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               11, 20
               

               Conread position:
               321-503
               

               Cow position:
               chr7:46327825-46327629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               324-524
               

               Cow position:
               chr7:20355911-20356107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               63, 88
               

               Conread position:
               324-537
               

               Cow position:
               chr7:22153104-22153333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               64, 193
               

               Conread position:
               325-523
               

               Cow position:
               chr7:61308053-61308259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               66, 129
               

               Conread position:
               330-505
               

               Cow position:
               chr7:10942900-10942723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               330-524
               

               Cow position:
               chr7:51884549-51884348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               59, 8
               

               Conread position:
               330-537
               

               Cow position:
               chr7:8261070-8260861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               53, 8
               

               Conread position:
               330-537
               

               Cow position:
               chr7:58773850-58774057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               68, 8
               

               Conread position:
               332-505
               

               Cow position:
               chr7:53038303-53038132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               25, 20
               

               Conread position:
               333-532
               

               Cow position:
               chr7:47771524-47771735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               333-534
               

               Cow position:
               chr7:37444829-37445034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               107, 160
               

               Conread position:
               333-537
               

               Cow position:
               chr7:18858298-18858506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               333-537
               

               Cow position:
               chr7:47172756-47172542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               52, 95
               

               Conread position:
               333-537
               

               Cow position:
               chr7:53005307-53005521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               334-522
               

               Cow position:
               chr7:49714781-49714971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               57, 115
               

               Conread position:
               334-525
               

               Cow position:
               chr7:32769330-32769133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               339-537
               

               Cow position:
               chr7:35504527-35504714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               341-537
               

               Cow position:
               chr7:57311584-57311789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               351-504
               

               Cow position:
               chr7:12233001-12233158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               46, 24
               

               Conread position:
               380-521
               

               Cow position:
               chr7:43215519-43215666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               10, 75
               

               Conread position:
               380-537
               

               Cow position:
               chr7:14043987-14044145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               381-520
               

               Cow position:
               chr7:24033396-24033258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               8, 124
               

               Conread position:
               382-537
               

               Cow position:
               chr7:17922295-17922451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               56, 15
               

               Conread position:
               383-531
               

               Cow position:
               chr7:7507568-7507716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               15, 120
               

               Conread position:
               383-531
               

               Cow position:
               chr7:25685027-25684878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               383-537
               

               Cow position:
               chr7:40192762-40192923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               383-537
               

               Cow position:
               chr7:41913684-41913526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               386-536
               

               Cow position:
               chr7:55076679-55076533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               12, 90
               

               Conread position:
               386-537
               

               Cow position:
               chr7:26466763-26466914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 22
               

               Conread position:
               388-522
               

               Cow position:
               chr7:5249891-5249756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               388-528
               

               Cow position:
               chr7:26908012-26907874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               9, 41
               

               Conread position:
               388-531
               

               Cow position:
               chr7:10099340-10099194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               388-535
               

               Cow position:
               chr7:11872586-11872434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr7:25445415-25445568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               10, 139
               

               Conread position:
               388-537
               

               Cow position:
               chr7:25914468-25914316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr7:34441164-34441015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               9, 100
               

               Conread position:
               388-537
               

               Cow position:
               chr7:51321758-51321904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               9, 113
               

               Conread position:
               388-537
               

               Cow position:
               chr7:57260225-57260078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               9, 101
               

               Conread position:
               389-532
               

               Cow position:
               chr7:12424565-12424714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               389-532
               

               Cow position:
               chr7:20108969-20108826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               8, 35
               

               Conread position:
               389-535
               

               Cow position:
               chr7:30404548-30404405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               12, 99
               

               Conread position:
               389-536
               

               Cow position:
               chr7:53743877-53743729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               389-537
               

               Cow position:
               chr7:32277561-32277709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               6, 60
               

               Conread position:
               391-523
               

               Cow position:
               chr7:58354675-58354544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               6, 116
               

               Conread position:
               392-535
               

               Cow position:
               chr7:64140114-64139975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               11, 26
               

               Conread position:
               393-526
               

               Cow position:
               chr7:47874958-47874825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr7:43234417-43234272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               397-529
               

               Cow position:
               chr7:58490114-58490246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               397-531
               

               Cow position:
               chr7:664224-664088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               397-536
               

               Cow position:
               chr7:36746359-36746496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               397-537
               

               Cow position:
               chr7:19881015-19880873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               398-530
               

               Cow position:
               chr7:62102627-62102759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               402-537
               

               Cow position:
               chr7:41727981-41728114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               411-537
               

               Cow position:
               chr7:50401775-50401649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               63, 6
               

               Conread position:
               413-537
               

               Cow position:
               chr7:10345419-10345295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               413-537
               

               Cow position:
               chr7:19423611-19423734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               46, 26
               

               Conread position:
               414-532
               

               Cow position:
               chr7:31224351-31224241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               419-535
               

               Cow position:
               chr7:58703833-58703948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               421-537
               

               Cow position:
               chr7:37906305-37906189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               436-537
               

               Cow position:
               chr7:25857400-25857299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               440-534
               

               Cow position:
               chr7:34027843-34027935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               84
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               440-537
               

               Cow position:
               chr7:3134093-3133996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               67, 72
               

               Conread position:
               440-537
               

               Cow position:
               chr7:62470869-62470964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               311-537
               

               Cow position:
               chr8:11896112-11896345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               34, 40
               

               Conread position:
               312-534
               

               Cow position:
               chr8:39967890-39967670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               74, 25
               

               Conread position:
               312-535
               

               Cow position:
               chr8:48763459-48763685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               80, 18
               

               Conread position:
               314-531
               

               Cow position:
               chr8:31815141-31814908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               67, 16
               

               Conread position:
               314-532
               

               Cow position:
               chr8:15686493-15686265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               314-534
               

               Cow position:
               chr8:942716-942949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               72, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr8:28221659-28221425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               67, 16
               

               Conread position:
               315-532
               

               Cow position:
               chr8:25572957-25573176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               5, 16
               

               Conread position:
               315-537
               

               Cow position:
               chr8:33842657-33842896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               5, 28
               

               Conread position:
               318-524
               

               Cow position:
               chr8:57236671-57236880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               11, 131
               

               Conread position:
               319-532
               

               Cow position:
               chr8:35218279-35218502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               62, 11
               

               Conread position:
               319-537
               

               Cow position:
               chr8:9811705-9811942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               9, 26
               

               Conread position:
               323-532
               

               Cow position:
               chr8:20892249-20892470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               323-532
               

               Cow position:
               chr8:25871638-25871863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               58, 211
               

               Conread position:
               323-537
               

               Cow position:
               chr8:17077737-17077963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               58, 29
               

               Conread position:
               327-527
               

               Cow position:
               chr8:47295894-47296101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               15, 96
               

               Conread position:
               330-522
               

               Cow position:
               chr8:24834633-24834829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               57, 8
               

               Conread position:
               330-524
               

               Cow position:
               chr8:31317464-31317640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               330-537
               

               Cow position:
               chr8:20682317-20682539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               57, 8
               

               Conread position:
               330-537
               

               Cow position:
               chr8:34318157-34317930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               58, 8
               

               Conread position:
               331-532
               

               Cow position:
               chr8:45987881-45987663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               53, 97
               

               Conread position:
               332-537
               

               Cow position:
               chr8:21281987-21282198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               56, 128
               

               Conread position:
               333-532
               

               Cow position:
               chr8:42575618-42575823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               55, 169
               

               Conread position:
               333-534
               

               Cow position:
               chr8:31646087-31645883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               94, 53
               

               Conread position:
               333-537
               

               Cow position:
               chr8:33510695-33510478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               335-519
               

               Cow position:
               chr8:55211099-55211284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               35, 113
               

               Conread position:
               335-524
               

               Cow position:
               chr8:24909526-24909715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               13, 52
               

               Conread position:
               335-527
               

               Cow position:
               chr8:53992018-53992206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               62, 51
               

               Conread position:
               335-537
               

               Cow position:
               chr8:8902045-8901844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               52, 14
               

               Conread position:
               336-536
               

               Cow position:
               chr8:26451059-26451262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               340-524
               

               Cow position:
               chr8:49300666-49300475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               49, 75
               

               Conread position:
               341-495
               

               Cow position:
               chr8:5668629-5668470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               341-537
               

               Cow position:
               chr8:5700338-5700139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               56, 171
               

               Conread position:
               343-532
               

               Cow position:
               chr8:56033935-56033735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               353-537
               

               Cow position:
               chr8:7671293-7671480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               38, 121
               

               Conread position:
               378-532
               

               Cow position:
               chr8:45586441-45586287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               25, 125
               

               Conread position:
               379-537
               

               Cow position:
               chr8:6330662-6330819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               381-532
               

               Cow position:
               chr8:51905056-51904902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               59, 21
               

               Conread position:
               381-537
               

               Cow position:
               chr8:36505360-36505516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               16, 132
               

               Conread position:
               383-497
               

               Cow position:
               chr8:10042638-10042753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               383-523
               

               Cow position:
               chr8:45486584-45486725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               383-535
               

               Cow position:
               chr8:25075580-25075732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               14, 121
               

               Conread position:
               383-537
               

               Cow position:
               chr8:13810187-13810343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               14, 110
               

               Conread position:
               383-537
               

               Cow position:
               chr8:46203251-46203407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               383-537
               

               Cow position:
               chr8:52863802-52863959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               384-537
               

               Cow position:
               chr8:41318023-41318177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               5, 35
               

               Conread position:
               387-537
               

               Cow position:
               chr8:11590910-11591060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               10, 109
               

               Conread position:
               387-537
               

               Cow position:
               chr8:20052934-20052778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               388-530
               

               Cow position:
               chr8:51959411-51959274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               388-531
               

               Cow position:
               chr8:13975882-13976025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               9, 130
               

               Conread position:
               388-531
               

               Cow position:
               chr8:43803538-43803685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               388-532
               

               Cow position:
               chr8:24426642-24426790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 114
               

               Conread position:
               388-537
               

               Cow position:
               chr8:32278029-32277884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               9, 101
               

               Conread position:
               388-537
               

               Cow position:
               chr8:53866098-53866242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               128, 54
               

               Conread position:
               389-537
               

               Cow position:
               chr8:26922610-26922764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               8, 135
               

               Conread position:
               389-537
               

               Cow position:
               chr8:46640341-46640196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               9, 18
               

               Conread position:
               390-537
               

               Cow position:
               chr8:27053607-27053461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               7, 77
               

               Conread position:
               396-521
               

               Cow position:
               chr8:44704086-44704216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               396-536
               

               Cow position:
               chr8:15969563-15969426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               80, 41
               

               Conread position:
               396-536
               

               Cow position:
               chr8:43693209-43693349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr8:8134503-8134361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               46, 96
               

               Conread position:
               396-537
               

               Cow position:
               chr8:13144443-13144304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               10, 117
               

               Conread position:
               396-537
               

               Cow position:
               chr8:39017701-39017846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               397-537
               

               Cow position:
               chr8:32079681-32079541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               397-537
               

               Cow position:
               chr8:37114909-37114770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               398-532
               

               Cow position:
               chr8:49265304-49265165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               399-535
               

               Cow position:
               chr8:11249477-11249341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               399-537
               

               Cow position:
               chr8:37487298-37487156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               413-504
               

               Cow position:
               chr8:48711703-48711794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               79
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               413-535
               

               Cow position:
               chr8:36471558-36471679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               413-537
               

               Cow position:
               chr8:13900415-13900541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               413-537
               

               Cow position:
               chr8:23030649-23030774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               413-537
               

               Cow position:
               chr8:24547033-24547157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               414-537
               

               Cow position:
               chr8:29935939-29936059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               420-537
               

               Cow position:
               chr8:19171592-19171473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               10, 100
               

               Conread position:
               424-535
               

               Cow position:
               chr8:52195982-52196093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               446-537
               

               Cow position:
               chr8:39936672-39936762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               80
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               309-537
               

               Cow position:
               chr9:50827785-50828023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               17, 164
               

               Conread position:
               313-498
               

               Cow position:
               chr9:49847336-49847144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               313-537
               

               Cow position:
               chr9:18093530-18093744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               85, 17
               

               Conread position:
               313-537
               

               Cow position:
               chr9:39428657-39428901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               314-505
               

               Cow position:
               chr9:56253033-56252831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               72, 16
               

               Conread position:
               314-522
               

               Cow position:
               chr9:8740651-8740450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               84, 16
               

               Conread position:
               314-524
               

               Cow position:
               chr9:44217895-44217686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               67, 16
               

               Conread position:
               314-524
               

               Cow position:
               chr9:46242129-46242346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               14, 136
               

               Conread position:
               314-528
               

               Cow position:
               chr9:8617936-8617726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               92, 16
               

               Conread position:
               314-530
               

               Cow position:
               chr9:58669511-58669287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               74, 16
               

               Conread position:
               314-531
               

               Cow position:
               chr9:42173063-42173281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               84, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr9:18110730-18110964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               74, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr9:34106857-34106612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               69, 16
               

               Conread position:
               314-537
               

               Cow position:
               chr9:34310165-34309927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               319-519
               

               Cow position:
               chr9:7843778-7843571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               24, 11
               

               Conread position:
               321-537
               

               Cow position:
               chr9:24837658-24837436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               64, 22
               

               Conread position:
               321-537
               

               Cow position:
               chr9:46227001-46226787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               42, 114
               

               Conread position:
               323-524
               

               Cow position:
               chr9:11146531-11146724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               74, 15
               

               Conread position:
               324-522
               

               Cow position:
               chr9:35368761-35368558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               68, 126
               

               Conread position:
               326-519
               

               Cow position:
               chr9:8914389-8914198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               73, 26
               

               Conread position:
               326-535
               

               Cow position:
               chr9:20839742-20839529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               18, 43
               

               Conread position:
               327-532
               

               Cow position:
               chr9:34204256-34204033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               327-537
               

               Cow position:
               chr9:30020093-30019880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               85, 65
               

               Conread position:
               330-522
               

               Cow position:
               chr9:3845097-3845293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               57, 8
               

               Conread position:
               330-537
               

               Cow position:
               chr9:33059161-33059373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               42, 8
               

               Conread position:
               332-534
               

               Cow position:
               chr9:32266277-32266486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               81, 64
               

               Conread position:
               333-505
               

               Cow position:
               chr9:44552858-44552677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               54, 13
               

               Conread position:
               333-529
               

               Cow position:
               chr9:2863548-2863350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               109, 65
               

               Conread position:
               333-534
               

               Cow position:
               chr9:10666907-10667122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 148
               

               Conread position:
               333-535
               

               Cow position:
               chr9:25469158-25468956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               57, 142
               

               Conread position:
               333-537
               

               Cow position:
               chr9:48773461-48773248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               55, 23
               

               Conread position:
               340-537
               

               Cow position:
               chr9:11102703-11102901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               340-537
               

               Cow position:
               chr9:34725399-34725611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               48, 137
               

               Conread position:
               344-532
               

               Cow position:
               chr9:48133834-48133635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               37, 92
               

               Conread position:
               380-535
               

               Cow position:
               chr9:40007919-40007763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               9, 136
               

               Conread position:
               380-537
               

               Cow position:
               chr9:3169465-3169624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               9, 140
               

               Conread position:
               380-537
               

               Cow position:
               chr9:20039073-20039230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               9, 125
               

               Conread position:
               380-537
               

               Cow position:
               chr9:27292219-27292380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               18, 36
               

               Conread position:
               380-537
               

               Cow position:
               chr9:46252876-46252722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               381-536
               

               Cow position:
               chr9:18237106-18237257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               381-536
               

               Cow position:
               chr9:19382385-19382230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               17, 33
               

               Conread position:
               383-526
               

               Cow position:
               chr9:14184719-14184576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               14, 135
               

               Conread position:
               383-536
               

               Cow position:
               chr9:32817084-32817242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               383-537
               

               Cow position:
               chr9:15006696-15006850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               14, 120
               

               Conread position:
               383-537
               

               Cow position:
               chr9:16118783-16118627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               59, 120
               

               Conread position:
               383-537
               

               Cow position:
               chr9:21462812-21462967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               383-537
               

               Cow position:
               chr9:32847943-32847788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               383-537
               

               Cow position:
               chr9:39152625-39152781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               386-504
               

               Cow position:
               chr9:52633441-52633559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               11, 60
               

               Conread position:
               386-530
               

               Cow position:
               chr9:12499064-12498916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               387-532
               

               Cow position:
               chr9:4858588-4858440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               43, 11
               

               Conread position:
               387-537
               

               Cow position:
               chr9:43926060-43926208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               10, 130
               

               Conread position:
               387-537
               

               Cow position:
               chr9:54206272-54206426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               388-532
               

               Cow position:
               chr9:49651775-49651632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               9, 94
               

               Conread position:
               388-535
               

               Cow position:
               chr9:15033955-15033809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               9, 68
               

               Conread position:
               388-537
               

               Cow position:
               chr9:9200671-9200823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 98
               

               Conread position:
               388-537
               

               Cow position:
               chr9:47925976-47925822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               388-537
               

               Cow position:
               chr9:56861058-56860915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               9, 43
               

               Conread position:
               388-537
               

               Cow position:
               chr9:64007833-64007982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               9, 127
               

               Conread position:
               389-537
               

               Cow position:
               chr9:17110820-17110672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               8, 35
               

               Conread position:
               390-505
               

               Cow position:
               chr9:11363942-11363827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               7, 95
               

               Conread position:
               390-537
               

               Cow position:
               chr9:38546462-38546317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               7, 93
               

               Conread position:
               390-537
               

               Cow position:
               chr9:41957853-41957705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               396-528
               

               Cow position:
               chr9:38927123-38926992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               69, 92
               

               Conread position:
               396-532
               

               Cow position:
               chr9:59761589-59761730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               396-535
               

               Cow position:
               chr9:35708579-35708718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr9:8657387-8657532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               396-537
               

               Cow position:
               chr9:48576603-48576743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               44, 89
               

               Conread position:
               396-537
               

               Cow position:
               chr9:53794488-53794629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               40, 75
               

               Conread position:
               397-537
               

               Cow position:
               chr9:21537310-21537166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               398-536
               

               Cow position:
               chr9:20200335-20200192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               399-519
               

               Cow position:
               chr9:21956760-21956640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               92
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               403-537
               

               Cow position:
               chr9:9761075-9760942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               403-537
               

               Cow position:
               chr9:20668410-20668285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               403-537
               

               Cow position:
               chr9:39108968-39109104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               72, 63
               

               Conread position:
               420-535
               

               Cow position:
               chr9:6203771-6203886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               430-537
               

               Cow position:
               chr9:36827704-36827597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               441-537
               

               Cow position:
               chr9:35278071-35277975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               81
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               452-537
               

               Cow position:
               chr9:21566627-21566712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               86
               

               Alignm identity:
               76
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               294-537
               

               Cow position:
               chrX:1978402-1978665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               313-537
               

               Cow position:
               chrX:25388315-25388088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               75, 43
               

               Conread position:
               313-537
               

               Cow position:
               chrX:29874432-29874214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               122, 56
               

               Conread position:
               313-537
               

               Cow position:
               chrX:36009996-36009755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               314-504
               

               Cow position:
               chrX:9161505-9161700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               71, 16
               

               Conread position:
               314-519
               

               Cow position:
               chrX:12725658-12725868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               71, 16
               

               Conread position:
               314-524
               

               Cow position:
               chrX:6479917-6480122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               83, 16
               

               Conread position:
               314-524
               

               Cow position:
               chrX:17743985-17744201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               71, 16
               

               Conread position:
               314-533
               

               Cow position:
               chrX:32743455-32743686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               72, 16
               

               Conread position:
               314-537
               

               Cow position:
               chrX:6563441-6563677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               69, 16
               

               Conread position:
               314-537
               

               Cow position:
               chrX:17042613-17042840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               91, 16
               

               Conread position:
               319-532
               

               Cow position:
               chrX:28787278-28787499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               9, 20
               

               Conread position:
               320-534
               

               Cow position:
               chrX:6203468-6203696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               17, 110
               

               Conread position:
               323-520
               

               Cow position:
               chrX:2029319-2029526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               63, 129
               

               Conread position:
               327-504
               

               Cow position:
               chrX:6643217-6643392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               71, 11
               

               Conread position:
               328-537
               

               Cow position:
               chrX:39415434-39415211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               52, 16
               

               Conread position:
               330-519
               

               Cow position:
               chrX:39097455-39097649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               31, 18
               

               Conread position:
               330-527
               

               Cow position:
               chrX:16284009-16283795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               15, 94
               

               Conread position:
               330-535
               

               Cow position:
               chrX:38999790-39000004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               54, 8
               

               Conread position:
               330-536
               

               Cow position:
               chrX:40789144-40789360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               56, 8
               

               Conread position:
               330-537
               

               Cow position:
               chrX:25338119-25338345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               330-537
               

               Cow position:
               chrX:36840811-36841020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               68, 8
               

               Conread position:
               332-530
               

               Cow position:
               chrX:26619171-26618967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               332-537
               

               Cow position:
               chrX:5046963-5046759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               12, 73
               

               Conread position:
               333-537
               

               Cow position:
               chrX:19678329-19678117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               56, 168
               

               Conread position:
               333-537
               

               Cow position:
               chrX:41083862-41084074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               334-508
               

               Cow position:
               chrX:7345024-7345212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               334-525
               

               Cow position:
               chrX:11562094-11562292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 114
               

               Conread position:
               334-537
               

               Cow position:
               chrX:22326057-22326277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               335-537
               

               Cow position:
               chrX:630369-630152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               338-537
               

               Cow position:
               chrX:34470674-34470870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               7, 61
               

               Conread position:
               340-528
               

               Cow position:
               chrX:41560310-41560122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               62, 158
               

               Conread position:
               340-537
               

               Cow position:
               chrX:37760829-37761028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               72, 42
               

               Conread position:
               341-535
               

               Cow position:
               chrX:18216231-18216424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               143, 87
               

               Conread position:
               358-537
               

               Cow position:
               chrX:6367814-6367619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               360-527
               

               Cow position:
               chrX:583012-583183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               31, 90
               

               Conread position:
               380-532
               

               Cow position:
               chrX:25713791-25713948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               380-537
               

               Cow position:
               chrX:21664723-21664563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               381-537
               

               Cow position:
               chrX:2300922-2301082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               381-537
               

               Cow position:
               chrX:21640427-21640582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               16, 5
               

               Conread position:
               381-537
               

               Cow position:
               chrX:27287736-27287579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               382-520
               

               Cow position:
               chrX:25419157-25419013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               16, 123
               

               Conread position:
               383-530
               

               Cow position:
               chrX:39545977-39545835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               15, 107
               

               Conread position:
               383-534
               

               Cow position:
               chrX:27176314-27176159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               14, 139
               

               Conread position:
               383-537
               

               Cow position:
               chrX:6656385-6656540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               385-531
               

               Cow position:
               chrX:46083971-46084124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               387-519
               

               Cow position:
               chrX:29032417-29032548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               10, 110
               

               Conread position:
               387-537
               

               Cow position:
               chrX:7425473-7425623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               387-537
               

               Cow position:
               chrX:18456408-18456558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               10, 102
               

               Conread position:
               388-503
               

               Cow position:
               chrX:20011415-20011532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               388-532
               

               Cow position:
               chrX:29408019-29407869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               388-537
               

               Cow position:
               chrX:9539330-9539479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               9, 130
               

               Conread position:
               388-537
               

               Cow position:
               chrX:9839232-9839381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               9, 130
               

               Conread position:
               388-537
               

               Cow position:
               chrX:10302343-10302499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               388-537
               

               Cow position:
               chrX:16419154-16419304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               388-537
               

               Cow position:
               chrX:26940501-26940360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               9, 71
               

               Conread position:
               388-537
               

               Cow position:
               chrX:31602661-31602815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               388-537
               

               Cow position:
               chrX:47744095-47744245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               389-531
               

               Cow position:
               chrX:30980130-30979984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               389-532
               

               Cow position:
               chrX:34355961-34355823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               8, 68
               

               Conread position:
               391-537
               

               Cow position:
               chrX:33802997-33802850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               396-510
               

               Cow position:
               chrX:16514249-16514136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               396-527
               

               Cow position:
               chrX:12304573-12304709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               397-524
               

               Cow position:
               chrX:23179266-23179134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               404-532
               

               Cow position:
               chrX:18142433-18142302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               31, 112
               

               Conread position:
               405-537
               

               Cow position:
               chrX:4446731-4446862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               407-537
               

               Cow position:
               chrX:16291996-16291863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               31, 94
               

               Conread position:
               413-532
               

               Cow position:
               chrX:27771543-27771425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               109, 75
               

               Conread position:
               413-532
               

               Cow position:
               chrX:43980769-43980888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               413-537
               

               Cow position:
               chrX:159726-159602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               415-531
               

               Cow position:
               chrX:10289594-10289476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               20, 8
               

               Conread position:
               423-537
               

               Cow position:
               chrX:2648168-2648054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               102, 80
               

               Conread position:
               433-537
               

               Cow position:
               chrX:31273256-31273360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               434-537
               

               Cow position:
               chrX:46028707-46028604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               440-537
               

               Cow position:
               chrX:488739-488835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               446-537
               

               Cow position:
               chrX:3951107-3951198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               81
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               450-537
               

               Cow position:
               chrX:33585562-33585649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
Conread position:	312-531
Cow position:	chr1:62732472-62732700 (view UCSC Genome Browser custom track)
Alignm length:	233
Alignm identity:	165
Alignm E-value:	8e-26
Alignm gaps (pig, cow):	16, 32
Conread position:	312-532
Cow position:	chr1:18414557-18414336 (view UCSC Genome Browser custom track)
Alignm length:	226
Alignm identity:	164
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	84, 18
Conread position:	312-537
Cow position:	chr1:45638384-45638620 (view UCSC Genome Browser custom track)
Alignm length:	238
Alignm identity:	161
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	80, 145
Conread position:	313-537
Cow position:	chr1:75998560-75998332 (view UCSC Genome Browser custom track)
Alignm length:	231
Alignm identity:	166
Alignm E-value:	2e-32
Alignm gaps (pig, cow):	89, 25
Conread position:	314-537
Cow position:	chr1:49131216-49130995 (view UCSC Genome Browser custom track)
Alignm length:	229
Alignm identity:	170
Alignm E-value:	2e-33
Alignm gaps (pig, cow):	91, 16
Conread position:	315-537
Cow position:	chr1:56643690-56643468 (view UCSC Genome Browser custom track)
Alignm length:	225
Alignm identity:	164
Alignm E-value:	8e-36
Alignm gaps (pig, cow):	5, 17
Conread position:	319-535
Cow position:	chr1:47117359-47117149 (view UCSC Genome Browser custom track)
Alignm length:	218
Alignm identity:	159
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	79, 11
Conread position:	319-537
Cow position:	chr1:13195515-13195297 (view UCSC Genome Browser custom track)
Alignm length:	227
Alignm identity:	163
Alignm E-value:	9e-27
Alignm gaps (pig, cow):	92, 11
Conread position:	321-535
Cow position:	chr1:31871330-31871564 (view UCSC Genome Browser custom track)
Alignm length:	237
Alignm identity:	171
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	64, 182
Conread position:	324-524
Cow position:	chr1:67407271-67407080 (view UCSC Genome Browser custom track)
Alignm length:	201
Alignm identity:	146
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	19, 0
Conread position:	324-537
Cow position:	chr1:22910280-22910490 (view UCSC Genome Browser custom track)
Alignm length:	217
Alignm identity:	166
Alignm E-value:	3e-38
Alignm gaps (pig, cow):	8, 26
Conread position:	325-504
Cow position:	chr1:46311042-46311232 (view UCSC Genome Browser custom track)
Alignm length:	191
Alignm identity:	138
Alignm E-value:	7e-24
Alignm gaps (pig, cow):	66, 0
Conread position:	325-530
Cow position:	chr1:101771814-101772029 (view UCSC Genome Browser custom track)
Alignm length:	219
Alignm identity:	156
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	65, 27
Conread position:	327-524
Cow position:	chr1:73363759-73363564 (view UCSC Genome Browser custom track)
Alignm length:	199
Alignm identity:	145
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	17, 37
Conread position:	327-537
Cow position:	chr1:44746775-44746996 (view UCSC Genome Browser custom track)
Alignm length:	225
Alignm identity:	167
Alignm E-value:	5e-32
Alignm gaps (pig, cow):	61, 175
Conread position:	329-537
Cow position:	chr1:28678433-28678659 (view UCSC Genome Browser custom track)
Alignm length:	228
Alignm identity:	168
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	57, 35
Conread position:	330-522
Cow position:	chr1:56073545-56073353 (view UCSC Genome Browser custom track)
Alignm length:	196
Alignm identity:	149
Alignm E-value:	6e-34
Alignm gaps (pig, cow):	67, 8
Conread position:	330-537
Cow position:	chr1:69415798-69415574 (view UCSC Genome Browser custom track)
Alignm length:	227
Alignm identity:	173
Alignm E-value:	6e-33
Alignm gaps (pig, cow):	71, 8
Conread position:	331-537
Cow position:	chr1:5102564-5102356 (view UCSC Genome Browser custom track)
Alignm length:	213
Alignm identity:	160
Alignm E-value:	7e-35
Alignm gaps (pig, cow):	83, 30
Conread position:	333-522
Cow position:	chr1:4239434-4239628 (view UCSC Genome Browser custom track)
Alignm length:	197
Alignm identity:	139
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	53, 114