Non-Coding RNA Search

Cow genome map


           Conread name:
           Pig2-101K22
        

               Conread position:
               167-356
               

               Cow position:
               chr1:24229941-24229753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               169, 91
               

               Conread position:
               176-362
               

               Cow position:
               chr1:79931259-79931084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               176-495
               

               Cow position:
               chr1:13797927-13797597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               187, 82
               

               Conread position:
               177-311
               

               Cow position:
               chr1:87737370-87737508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               177-326
               

               Cow position:
               chr1:28469932-28469786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               41, 16
               

               Conread position:
               177-346
               

               Cow position:
               chr1:70256754-70256586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               177-356
               

               Cow position:
               chr1:4269471-4269294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               177-369
               

               Cow position:
               chr1:60452331-60452523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               152
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               30, 82
               

               Conread position:
               177-388
               

               Cow position:
               chr1:7435023-7434808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               86, 81
               

               Conread position:
               177-396
               

               Cow position:
               chr1:81469011-81469228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               187, 43
               

               Conread position:
               177-476
               

               Cow position:
               chr1:78728736-78728421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               172, 81
               

               Conread position:
               177-496
               

               Cow position:
               chr1:76660348-76660688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               19, 177
               

               Conread position:
               177-501
               

               Cow position:
               chr1:9147716-9147380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               229
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               188, 81
               

               Conread position:
               178-349
               

               Cow position:
               chr1:91840787-91840957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               178-389
               

               Cow position:
               chr1:82422780-82422992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               86, 81
               

               Conread position:
               183-316
               

               Cow position:
               chr1:93131126-93131258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               183-346
               

               Cow position:
               chr1:17467463-17467624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               101, 19
               

               Conread position:
               183-356
               

               Cow position:
               chr1:6971783-6971955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               24, 77
               

               Conread position:
               183-387
               

               Cow position:
               chr1:93579823-93580022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               197, 75
               

               Conread position:
               183-389
               

               Cow position:
               chr1:39066946-39067148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               155, 75
               

               Conread position:
               183-389
               

               Cow position:
               chr1:91819402-91819611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               180, 75
               

               Conread position:
               186-349
               

               Cow position:
               chr1:93441052-93440888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               21, 74
               

               Conread position:
               186-351
               

               Cow position:
               chr1:22605550-22605710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               20, 40
               

               Conread position:
               186-356
               

               Cow position:
               chr1:22442479-22442649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               59, 16
               

               Conread position:
               186-356
               

               Cow position:
               chr1:25222845-25223007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               41, 73
               

               Conread position:
               187-306
               

               Cow position:
               chr1:89939070-89939188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               197-369
               

               Cow position:
               chr1:8319237-8319067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               198-304
               

               Cow position:
               chr1:70310002-70309898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               200-496
               

               Cow position:
               chr1:93571566-93571881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               164, 58
               

               Conread position:
               202-358
               

               Cow position:
               chr1:96313227-96313072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               208-349
               

               Cow position:
               chr1:44128873-44129013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               176-333
               

               Cow position:
               chr10:29707045-29706880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               36, 94
               

               Conread position:
               176-357
               

               Cow position:
               chr10:16979826-16979998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               117, 34
               

               Conread position:
               176-361
               

               Cow position:
               chr10:9372555-9372372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               149
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               176-362
               

               Cow position:
               chr10:60963246-60963426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               69, 48
               

               Conread position:
               177-350
               

               Cow position:
               chr10:9109002-9108830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               29, 79
               

               Conread position:
               177-384
               

               Cow position:
               chr10:41118461-41118254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               187, 82
               

               Conread position:
               177-396
               

               Cow position:
               chr10:55116462-55116247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               181, 63
               

               Conread position:
               178-386
               

               Cow position:
               chr10:14606249-14606462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               33, 82
               

               Conread position:
               183-309
               

               Cow position:
               chr10:9117726-9117604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               183-345
               

               Cow position:
               chr10:65205941-65205780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               153, 75
               

               Conread position:
               183-348
               

               Cow position:
               chr10:50463456-50463615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               155, 18
               

               Conread position:
               183-357
               

               Cow position:
               chr10:48450506-48450681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               28, 76
               

               Conread position:
               183-361
               

               Cow position:
               chr10:30615624-30615444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               21, 77
               

               Conread position:
               186-389
               

               Cow position:
               chr10:21341264-21341058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               152, 72
               

               Conread position:
               194-345
               

               Cow position:
               chr10:56916564-56916414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               194-387
               

               Cow position:
               chr10:57855600-57855416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               121, 44
               

               Conread position:
               200-355
               

               Cow position:
               chr10:36297643-36297797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               100, 13
               

               Conread position:
               211-361
               

               Cow position:
               chr10:53822295-53822444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               127, 47
               

               Conread position:
               214-361
               

               Cow position:
               chr10:14894456-14894310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               124, 44
               

               Conread position:
               225-362
               

               Cow position:
               chr10:67156804-67156943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               18, 12
               

               Conread position:
               175-353
               

               Cow position:
               chr11:75129610-75129787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               175-485
               

               Cow position:
               chr11:85701856-85701542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               202, 83
               

               Conread position:
               176-356
               

               Cow position:
               chr11:433330-433157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               176-386
               

               Cow position:
               chr11:48074255-48074040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               176-389
               

               Cow position:
               chr11:36397364-36397153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 39
               

               Conread position:
               176-497
               

               Cow position:
               chr11:50040686-50040370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 82
               

               Conread position:
               177-345
               

               Cow position:
               chr11:59969726-59969557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               68, 82
               

               Conread position:
               177-346
               

               Cow position:
               chr11:58355759-58355596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               177-363
               

               Cow position:
               chr11:30474137-30473952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               177-369
               

               Cow position:
               chr11:3612579-3612401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               178-501
               

               Cow position:
               chr11:18139139-18139476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               241
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               157, 80
               

               Conread position:
               183-356
               

               Cow position:
               chr11:61469584-61469411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               73, 62
               

               Conread position:
               183-362
               

               Cow position:
               chr11:63283330-63283157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               183-362
               

               Cow position:
               chr11:83551726-83551548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               28, 76
               

               Conread position:
               183-369
               

               Cow position:
               chr11:71161697-71161880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               183-397
               

               Cow position:
               chr11:37328365-37328153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               174, 19
               

               Conread position:
               186-313
               

               Cow position:
               chr11:75167638-75167764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               186-353
               

               Cow position:
               chr11:14191384-14191553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               54, 75
               

               Conread position:
               186-360
               

               Cow position:
               chr11:35745716-35745549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               153, 15
               

               Conread position:
               189-354
               

               Cow position:
               chr11:63667182-63667019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               195-496
               

               Cow position:
               chr11:58354922-58354613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               144, 63
               

               Conread position:
               196-309
               

               Cow position:
               chr11:7549100-7549212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               198-485
               

               Cow position:
               chr11:83266184-83266484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               123, 60
               

               Conread position:
               199-400
               

               Cow position:
               chr11:65753044-65753250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               118, 60
               

               Conread position:
               205-387
               

               Cow position:
               chr11:18179938-18180121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               151, 53
               

               Conread position:
               206-358
               

               Cow position:
               chr11:55183515-55183666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               132, 53
               

               Conread position:
               206-362
               

               Cow position:
               chr11:40582524-40582673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               218-393
               

               Cow position:
               chr11:68169383-68169564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               26, 126
               

               Conread position:
               221-356
               

               Cow position:
               chr11:6887063-6887197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               223-436
               

               Cow position:
               chr11:31815465-31815260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               139, 35
               

               Conread position:
               225-381
               

               Cow position:
               chr11:33189953-33190111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               140, 30
               

               Conread position:
               176-393
               

               Cow position:
               chr12:20840940-20841155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               71, 25
               

               Conread position:
               176-396
               

               Cow position:
               chr12:41468141-41468359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               186, 82
               

               Conread position:
               177-305
               

               Cow position:
               chr12:26616338-26616210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               34, 82
               

               Conread position:
               177-345
               

               Cow position:
               chr12:45811652-45811485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               177-356
               

               Cow position:
               chr12:37481876-37482053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               177-362
               

               Cow position:
               chr12:37465729-37465914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               177-389
               

               Cow position:
               chr12:38589368-38589153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               35, 82
               

               Conread position:
               177-497
               

               Cow position:
               chr12:24334198-24333873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 81
               

               Conread position:
               183-368
               

               Cow position:
               chr12:1664707-1664892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               57, 29
               

               Conread position:
               196-389
               

               Cow position:
               chr12:26549994-26549798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               15, 63
               

               Conread position:
               114-389
               

               Cow position:
               chr13:10003263-10002983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               50, 19
               

               Conread position:
               175-356
               

               Cow position:
               chr13:41691024-41690850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               176-501
               

               Cow position:
               chr13:54409367-54409027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               244
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               164, 79
               

               Conread position:
               177-318
               

               Cow position:
               chr13:13559465-13559601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               177-350
               

               Cow position:
               chr13:22108445-22108276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               177-350
               

               Cow position:
               chr13:22169173-22169008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               140, 19
               

               Conread position:
               177-355
               

               Cow position:
               chr13:14574356-14574533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               177-356
               

               Cow position:
               chr13:34189778-34189955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               177-357
               

               Cow position:
               chr13:47305236-47305070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               177-361
               

               Cow position:
               chr13:5610599-5610416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               177-369
               

               Cow position:
               chr13:14726426-14726617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               177-386
               

               Cow position:
               chr13:52693351-52693558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               161, 35
               

               Conread position:
               177-388
               

               Cow position:
               chr13:30335452-30335665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               177-389
               

               Cow position:
               chr13:52852100-52852315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               170
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               161, 81
               

               Conread position:
               178-309
               

               Cow position:
               chr13:5249422-5249552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               178-356
               

               Cow position:
               chr13:50813636-50813458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               21, 78
               

               Conread position:
               181-355
               

               Cow position:
               chr13:50787136-50787307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               181-361
               

               Cow position:
               chr13:15348068-15347890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               32, 68
               

               Conread position:
               183-309
               

               Cow position:
               chr13:8427493-8427620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               21, 79
               

               Conread position:
               183-319
               

               Cow position:
               chr13:55380579-55380445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               183-356
               

               Cow position:
               chr13:31483308-31483137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               24, 76
               

               Conread position:
               183-363
               

               Cow position:
               chr13:15310602-15310427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               24, 76
               

               Conread position:
               183-363
               

               Cow position:
               chr13:31488912-31488733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               183-400
               

               Cow position:
               chr13:26005273-26005056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               166
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               198, 75
               

               Conread position:
               183-501
               

               Cow position:
               chr13:52184260-52183939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               230
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               200, 75
               

               Conread position:
               186-501
               

               Cow position:
               chr13:43784099-43783774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               232
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               206, 72
               

               Conread position:
               187-342
               

               Cow position:
               chr13:26324731-26324886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               135, 71
               

               Conread position:
               196-356
               

               Cow position:
               chr13:54718707-54718548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               198-317
               

               Cow position:
               chr13:14024749-14024633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 49
               

               Conread position:
               200-473
               

               Cow position:
               chr13:56227036-56227315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               60, 200
               

               Conread position:
               211-366
               

               Cow position:
               chr13:27710936-27710782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               175-369
               

               Cow position:
               chr14:7149285-7149475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               176-366
               

               Cow position:
               chr14:7115951-7115763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               159, 75
               

               Conread position:
               176-389
               

               Cow position:
               chr14:23148883-23148669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               188, 34
               

               Conread position:
               176-424
               

               Cow position:
               chr14:44539215-44539464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               57, 83
               

               Conread position:
               177-346
               

               Cow position:
               chr14:15756724-15756892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               177-356
               

               Cow position:
               chr14:10081882-10082060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               177-362
               

               Cow position:
               chr14:45733975-45733795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               159, 17
               

               Conread position:
               177-501
               

               Cow position:
               chr14:5570036-5569731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               36, 82
               

               Conread position:
               178-356
               

               Cow position:
               chr14:23149913-23149735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               34, 81
               

               Conread position:
               178-356
               

               Cow position:
               chr14:47151831-47152007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               160, 80
               

               Conread position:
               178-424
               

               Cow position:
               chr14:23755037-23755267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               232, 66
               

               Conread position:
               182-346
               

               Cow position:
               chr14:16517491-16517651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               183-355
               

               Cow position:
               chr14:1858098-1858271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               59, 78
               

               Conread position:
               183-390
               

               Cow position:
               chr14:18579292-18579084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               156, 61
               

               Conread position:
               186-366
               

               Cow position:
               chr14:34097160-34096981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               162, 69
               

               Conread position:
               196-494
               

               Cow position:
               chr14:33534370-33534677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               168, 64
               

               Conread position:
               200-319
               

               Cow position:
               chr14:45780114-45779996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               202-313
               

               Cow position:
               chr14:11075018-11074908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               217-502
               

               Cow position:
               chr14:18439326-18439024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               131, 41
               

               Conread position:
               221-424
               

               Cow position:
               chr14:2279150-2279355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               76, 34
               

               Conread position:
               243-388
               

               Cow position:
               chr14:4234342-4234194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               176-358
               

               Cow position:
               chr15:28977251-28977419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               176-389
               

               Cow position:
               chr15:30559898-30559682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 82
               

               Conread position:
               177-326
               

               Cow position:
               chr15:16444705-16444557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               5, 13
               

               Conread position:
               177-345
               

               Cow position:
               chr15:14494435-14494606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               100, 84
               

               Conread position:
               177-346
               

               Cow position:
               chr15:8284801-8284639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               177-362
               

               Cow position:
               chr15:9369991-9369813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               177-366
               

               Cow position:
               chr15:42288812-42289001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               35, 82
               

               Conread position:
               177-382
               

               Cow position:
               chr15:30945280-30945487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               163
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               187, 85
               

               Conread position:
               177-397
               

               Cow position:
               chr15:52822773-52822998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               94, 81
               

               Conread position:
               178-361
               

               Cow position:
               chr15:39568920-39568736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               34, 83
               

               Conread position:
               183-389
               

               Cow position:
               chr15:22093169-22092965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               186-394
               

               Cow position:
               chr15:14088761-14088556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               11, 21
               

               Conread position:
               186-404
               

               Cow position:
               chr15:22486389-22486174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               26, 70
               

               Conread position:
               187-423
               

               Cow position:
               chr15:34436343-34436580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               67, 138
               

               Conread position:
               194-356
               

               Cow position:
               chr15:44902559-44902398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               199-346
               

               Cow position:
               chr15:433227-433081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               206-369
               

               Cow position:
               chr15:5000840-5001001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               210-345
               

               Cow position:
               chr15:18638929-18638797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               249-501
               

               Cow position:
               chr15:36382511-36382782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               111, 9
               

               Conread position:
               176-356
               

               Cow position:
               chr16:18054654-18054475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               144
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               176-357
               

               Cow position:
               chr16:54014889-54014714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               163, 18
               

               Conread position:
               176-362
               

               Cow position:
               chr16:21558265-21558080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               176-362
               

               Cow position:
               chr16:33644189-33644374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               176-384
               

               Cow position:
               chr16:56078921-56078721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 46
               

               Conread position:
               176-389
               

               Cow position:
               chr16:40516429-40516639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               162, 71
               

               Conread position:
               176-500
               

               Cow position:
               chr16:3850446-3850788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               186, 59
               

               Conread position:
               177-319
               

               Cow position:
               chr16:13108920-13109057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               177-340
               

               Cow position:
               chr16:33440008-33439849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               177-389
               

               Cow position:
               chr16:13924858-13925071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               169, 29
               

               Conread position:
               177-424
               

               Cow position:
               chr16:16600051-16599817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               188
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               181-323
               

               Cow position:
               chr16:10629702-10629564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               183-356
               

               Cow position:
               chr16:23846518-23846676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               183-362
               

               Cow position:
               chr16:2250045-2249869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               183-369
               

               Cow position:
               chr16:37225510-37225693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               183-369
               

               Cow position:
               chr16:48889764-48889949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               183-389
               

               Cow position:
               chr16:29661534-29661324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               5, 76
               

               Conread position:
               183-424
               

               Cow position:
               chr16:15668999-15669241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               181, 75
               

               Conread position:
               186-320
               

               Cow position:
               chr16:45600831-45600698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               186-334
               

               Cow position:
               chr16:40128747-40128599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               11, 73
               

               Conread position:
               186-356
               

               Cow position:
               chr16:39021280-39021112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               186-361
               

               Cow position:
               chr16:27274944-27275113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               188-351
               

               Cow position:
               chr16:53617394-53617552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               123, 18
               

               Conread position:
               198-349
               

               Cow position:
               chr16:45132860-45133011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               149, 57
               

               Conread position:
               200-382
               

               Cow position:
               chr16:30655208-30655026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               164, 96
               

               Conread position:
               208-396
               

               Cow position:
               chr16:31133385-31133194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               131, 50
               

               Conread position:
               212-357
               

               Cow position:
               chr16:35280834-35280692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               175-500
               

               Cow position:
               chr17:22808574-22808911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 83
               

               Conread position:
               176-361
               

               Cow position:
               chr17:21851121-21851303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               162, 20
               

               Conread position:
               176-389
               

               Cow position:
               chr17:22470125-22470341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               162, 73
               

               Conread position:
               177-319
               

               Cow position:
               chr17:24827300-24827160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               27, 9
               

               Conread position:
               177-334
               

               Cow position:
               chr17:16358778-16358623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               153, 42
               

               Conread position:
               177-357
               

               Cow position:
               chr17:9086493-9086316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               177-361
               

               Cow position:
               chr17:35251397-35251580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               161, 81
               

               Conread position:
               177-389
               

               Cow position:
               chr17:25504121-25503909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               162, 29
               

               Conread position:
               183-345
               

               Cow position:
               chr17:8303766-8303608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               155, 40
               

               Conread position:
               186-345
               

               Cow position:
               chr17:3836657-3836501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               186-358
               

               Cow position:
               chr17:24004841-24004678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               152, 20
               

               Conread position:
               187-310
               

               Cow position:
               chr17:1101375-1101254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               188-424
               

               Cow position:
               chr17:21898531-21898288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               175, 70
               

               Conread position:
               196-387
               

               Cow position:
               chr17:10639839-10639646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               11, 63
               

               Conread position:
               198-480
               

               Cow position:
               chr17:4490-4777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               166, 16
               

               Conread position:
               202-358
               

               Cow position:
               chr17:24995286-24995442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               248-362
               

               Cow position:
               chr17:8639753-8639641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               176-389
               

               Cow position:
               chr18:2116940-2117159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               61, 83
               

               Conread position:
               177-345
               

               Cow position:
               chr18:38308705-38308876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               177-356
               

               Cow position:
               chr18:43243733-43243554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               30, 82
               

               Conread position:
               177-356
               

               Cow position:
               chr18:52707192-52707369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               177-361
               

               Cow position:
               chr18:14140092-14139911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               177-361
               

               Cow position:
               chr18:21611693-21611877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               5, 10
               

               Conread position:
               178-334
               

               Cow position:
               chr18:17220815-17220970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               178-334
               

               Cow position:
               chr18:17235463-17235618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               179-320
               

               Cow position:
               chr18:7111822-7111684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               179-354
               

               Cow position:
               chr18:21737182-21737356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               182-362
               

               Cow position:
               chr18:25088982-25088807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               154, 66
               

               Conread position:
               182-389
               

               Cow position:
               chr18:49646647-49646853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               156, 24
               

               Conread position:
               186-362
               

               Cow position:
               chr18:8340792-8340964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               187-322
               

               Cow position:
               chr18:48004651-48004519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               177-364
               

               Cow position:
               chr19:22429112-22428923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               26, 84
               

               Conread position:
               178-393
               

               Cow position:
               chr19:44339134-44338921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               27, 48
               

               Conread position:
               183-317
               

               Cow position:
               chr19:9903818-9903685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               183-361
               

               Cow position:
               chr19:11784235-11784412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               157, 75
               

               Conread position:
               203-351
               

               Cow position:
               chr19:28610298-28610443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               204-357
               

               Cow position:
               chr19:53629806-53629957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               134, 54
               

               Conread position:
               218-390
               

               Cow position:
               chr19:9431559-9431726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               146, 40
               

               Conread position:
               219-346
               

               Cow position:
               chr19:47325666-47325791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               176-326
               

               Cow position:
               chr2:46277366-46277514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               176-356
               

               Cow position:
               chr2:71461836-71461658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               176-396
               

               Cow position:
               chr2:12854794-12855015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               163, 82
               

               Conread position:
               177-350
               

               Cow position:
               chr2:18088821-18088993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               5, 10
               

               Conread position:
               177-356
               

               Cow position:
               chr2:15339487-15339663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               177-361
               

               Cow position:
               chr2:45113674-45113856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               177-369
               

               Cow position:
               chr2:3713806-3713615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               177-424
               

               Cow position:
               chr2:70177940-70177697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               186, 57
               

               Conread position:
               178-389
               

               Cow position:
               chr2:19063643-19063433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               184, 44
               

               Conread position:
               179-361
               

               Cow position:
               chr2:70279190-70279371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               146
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               183-345
               

               Cow position:
               chr2:15335812-15335971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               183-361
               

               Cow position:
               chr2:19150316-19150141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               148
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               152, 39
               

               Conread position:
               183-495
               

               Cow position:
               chr2:856591-856914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               175, 75
               

               Conread position:
               186-344
               

               Cow position:
               chr2:57995950-57995798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               139, 26
               

               Conread position:
               186-358
               

               Cow position:
               chr2:76617999-76618165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               186-389
               

               Cow position:
               chr2:74811303-74811094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               144, 31
               

               Conread position:
               190-363
               

               Cow position:
               chr2:59163857-59163689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               37, 47
               

               Conread position:
               194-496
               

               Cow position:
               chr2:21755215-21755513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               171, 16
               

               Conread position:
               196-389
               

               Cow position:
               chr2:46258419-46258223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               142, 64
               

               Conread position:
               196-496
               

               Cow position:
               chr2:45690204-45690491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               205, 62
               

               Conread position:
               198-355
               

               Cow position:
               chr2:46448270-46448110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               92, 60
               

               Conread position:
               206-389
               

               Cow position:
               chr2:67381676-67381870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               127, 41
               

               Conread position:
               221-386
               

               Cow position:
               chr2:74308107-74308274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               107, 37
               

               Conread position:
               235-424
               

               Cow position:
               chr2:23648219-23648406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               130, 23
               

               Conread position:
               239-396
               

               Cow position:
               chr2:46307664-46307823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               99, 19
               

               Conread position:
               175-357
               

               Cow position:
               chr20:20768650-20768830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               177-355
               

               Cow position:
               chr20:40093084-40092909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               177-388
               

               Cow position:
               chr20:13358084-13357884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               178-379
               

               Cow position:
               chr20:7776935-7776730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               60, 84
               

               Conread position:
               183-346
               

               Cow position:
               chr20:37071449-37071286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               58, 76
               

               Conread position:
               183-369
               

               Cow position:
               chr20:39973646-39973470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               186-369
               

               Cow position:
               chr20:23925240-23925424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               189-338
               

               Cow position:
               chr20:41172123-41172269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               200-359
               

               Cow position:
               chr20:3057439-3057282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               202-388
               

               Cow position:
               chr20:33705194-33705381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               158, 19
               

               Conread position:
               241-356
               

               Cow position:
               chr20:33190789-33190675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               167-486
               

               Cow position:
               chr21:22162923-22162618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               40, 70
               

               Conread position:
               175-501
               

               Cow position:
               chr21:42074685-42075026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               187, 9
               

               Conread position:
               176-356
               

               Cow position:
               chr21:9013949-9013771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               176-356
               

               Cow position:
               chr21:41535875-41536049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               69, 41
               

               Conread position:
               177-304
               

               Cow position:
               chr21:47955556-47955431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               177-323
               

               Cow position:
               chr21:4809532-4809676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               177-346
               

               Cow position:
               chr21:19572916-19572753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               177-350
               

               Cow position:
               chr21:9015791-9015619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               177-407
               

               Cow position:
               chr21:41140018-41140248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               186, 81
               

               Conread position:
               182-346
               

               Cow position:
               chr21:18468771-18468933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               183-356
               

               Cow position:
               chr21:2681940-2681768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               183-358
               

               Cow position:
               chr21:7096284-7096111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               183-369
               

               Cow position:
               chr21:9199998-9199811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               141, 75
               

               Conread position:
               183-496
               

               Cow position:
               chr21:958497-958179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               65, 78
               

               Conread position:
               186-356
               

               Cow position:
               chr21:10275812-10275642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               89, 72
               

               Conread position:
               186-389
               

               Cow position:
               chr21:8941274-8941476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               153, 8
               

               Conread position:
               189-501
               

               Cow position:
               chr21:49689032-49689352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               175, 41
               

               Conread position:
               194-496
               

               Cow position:
               chr21:35555698-35555388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               236
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               170, 31
               

               Conread position:
               194-503
               

               Cow position:
               chr21:8515789-8515474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               166, 64
               

               Conread position:
               196-356
               

               Cow position:
               chr21:13361138-13360979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               202-356
               

               Cow position:
               chr21:18540810-18540657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               8, 57
               

               Conread position:
               211-369
               

               Cow position:
               chr21:9019389-9019232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               170-367
               

               Cow position:
               chr22:15682556-15682360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               42, 81
               

               Conread position:
               176-497
               

               Cow position:
               chr22:894171-894489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               235
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               188, 20
               

               Conread position:
               177-356
               

               Cow position:
               chr22:25588058-25588232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               32, 49
               

               Conread position:
               177-387
               

               Cow position:
               chr22:14447377-14447587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               194, 81
               

               Conread position:
               177-493
               

               Cow position:
               chr22:35892800-35893118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               102, 81
               

               Conread position:
               178-356
               

               Cow position:
               chr22:23086465-23086293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               178-477
               

               Cow position:
               chr22:20077931-20078247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               183-356
               

               Cow position:
               chr22:21164826-21164999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               35, 73
               

               Conread position:
               183-389
               

               Cow position:
               chr22:13513229-13513434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               29, 76
               

               Conread position:
               206-381
               

               Cow position:
               chr22:41957687-41957864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               132, 52
               

               Conread position:
               219-356
               

               Cow position:
               chr22:21169700-21169836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               239-354
               

               Cow position:
               chr22:20314657-20314771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               176-356
               

               Cow position:
               chr23:4634291-4634125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               176-356
               

               Cow position:
               chr23:35164604-35164782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               177-356
               

               Cow position:
               chr23:4652080-4651904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               177-369
               

               Cow position:
               chr23:596755-596567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               177-501
               

               Cow position:
               chr23:19788632-19788964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               186, 20
               

               Conread position:
               178-400
               

               Cow position:
               chr23:7523471-7523243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               18, 83
               

               Conread position:
               183-313
               

               Cow position:
               chr23:595498-595369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               183-415
               

               Cow position:
               chr23:6303798-6303568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               198, 75
               

               Conread position:
               186-355
               

               Cow position:
               chr23:19841076-19840908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               186-356
               

               Cow position:
               chr23:30589054-30589223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               21, 6
               

               Conread position:
               188-496
               

               Cow position:
               chr23:1280596-1280270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               237
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               169, 70
               

               Conread position:
               189-356
               

               Cow position:
               chr23:18243915-18243750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               150, 58
               

               Conread position:
               191-369
               

               Cow position:
               chr23:3536126-3536302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               196-345
               

               Cow position:
               chr23:1606683-1606535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               200-344
               

               Cow position:
               chr23:27804-27948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               130, 58
               

               Conread position:
               200-385
               

               Cow position:
               chr23:12980356-12980543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               165, 50
               

               Conread position:
               260-424
               

               Cow position:
               chr23:31086208-31086046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               103, 118
               

               Conread position:
               178-386
               

               Cow position:
               chr24:20927507-20927301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               160, 16
               

               Conread position:
               183-356
               

               Cow position:
               chr24:27218558-27218386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               143
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               183-359
               

               Cow position:
               chr24:31377014-31376844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               183-496
               

               Cow position:
               chr24:18401478-18401798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               203, 75
               

               Conread position:
               186-356
               

               Cow position:
               chr24:41205570-41205399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               120, 69
               

               Conread position:
               187-355
               

               Cow position:
               chr24:18620831-18620998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               201-319
               

               Cow position:
               chr24:32458494-32458379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               201-320
               

               Cow position:
               chr24:13161537-13161418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               44, 59
               

               Conread position:
               207-362
               

               Cow position:
               chr24:39304155-39304308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               256-516
               

               Cow position:
               chr24:39481994-39482269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               83, 62
               

               Conread position:
               176-356
               

               Cow position:
               chr25:26313950-26313771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               176-400
               

               Cow position:
               chr25:20193414-20193186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               42, 29
               

               Conread position:
               176-476
               

               Cow position:
               chr25:20645894-20645593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 84
               

               Conread position:
               177-326
               

               Cow position:
               chr25:13695465-13695614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               5, 13
               

               Conread position:
               177-344
               

               Cow position:
               chr25:21516929-21516769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               183-326
               

               Cow position:
               chr25:6932660-6932800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               183-356
               

               Cow position:
               chr25:16129217-16129387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               186-356
               

               Cow position:
               chr25:23821281-23821124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               191-345
               

               Cow position:
               chr25:16129987-16130131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               200-361
               

               Cow position:
               chr25:34420514-34420358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               138, 58
               

               Conread position:
               206-361
               

               Cow position:
               chr25:24750588-24750433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               132, 52
               

               Conread position:
               225-356
               

               Cow position:
               chr25:18456049-18455923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               176-356
               

               Cow position:
               chr26:30401625-30401445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               30, 83
               

               Conread position:
               177-323
               

               Cow position:
               chr26:758298-758446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               29, 84
               

               Conread position:
               177-356
               

               Cow position:
               chr26:31844813-31844991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               177-363
               

               Cow position:
               chr26:32073504-32073689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               41, 83
               

               Conread position:
               186-349
               

               Cow position:
               chr26:22253763-22253600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               144, 74
               

               Conread position:
               186-501
               

               Cow position:
               chr26:1068569-1068240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               235
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               178, 15
               

               Conread position:
               194-362
               

               Cow position:
               chr26:25303282-25303115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               200-496
               

               Cow position:
               chr26:31832982-31833292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               89, 58
               

               Conread position:
               175-493
               

               Cow position:
               chr27:7139839-7139525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               43, 84
               

               Conread position:
               176-326
               

               Cow position:
               chr27:31545507-31545657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               35, 84
               

               Conread position:
               176-501
               

               Cow position:
               chr27:15511882-15511557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 82
               

               Conread position:
               177-313
               

               Cow position:
               chr27:56158-56293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               120, 78
               

               Conread position:
               177-356
               

               Cow position:
               chr27:7618559-7618731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               183-497
               

               Cow position:
               chr27:23089767-23089436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               234
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               181, 65
               

               Conread position:
               186-400
               

               Cow position:
               chr27:23996380-23996596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               173
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               152, 72
               

               Conread position:
               198-351
               

               Cow position:
               chr27:16587568-16587720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               200-361
               

               Cow position:
               chr27:30992459-30992618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               139, 55
               

               Conread position:
               217-424
               

               Cow position:
               chr27:23087463-23087669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               38, 31
               

               Conread position:
               174-356
               

               Cow position:
               chr28:5933287-5933110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               177-356
               

               Cow position:
               chr28:2052174-2051997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               161, 32
               

               Conread position:
               199-317
               

               Cow position:
               chr28:26251854-26251972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               43, 61
               

               Conread position:
               205-361
               

               Cow position:
               chr28:33064561-33064397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               49, 128
               

               Conread position:
               176-322
               

               Cow position:
               chr29:6743985-6743840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               177-344
               

               Cow position:
               chr29:16431519-16431353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               74, 82
               

               Conread position:
               177-345
               

               Cow position:
               chr29:32203925-32204091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               55, 82
               

               Conread position:
               177-346
               

               Cow position:
               chr29:11360977-11360808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               13, 82
               

               Conread position:
               177-349
               

               Cow position:
               chr29:23133890-23134058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               177-349
               

               Cow position:
               chr29:29455884-29455713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               5, 17
               

               Conread position:
               177-350
               

               Cow position:
               chr29:27058256-27058422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               34, 82
               

               Conread position:
               177-356
               

               Cow position:
               chr29:40632854-40632682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               177-416
               

               Cow position:
               chr29:43153074-43153310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               26, 85
               

               Conread position:
               177-496
               

               Cow position:
               chr29:25388829-25388517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               185, 70
               

               Conread position:
               178-337
               

               Cow position:
               chr29:40567125-40566966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               46, 28
               

               Conread position:
               181-356
               

               Cow position:
               chr29:20049666-20049840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               31, 5
               

               Conread position:
               183-345
               

               Cow position:
               chr29:3235436-3235596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               183-369
               

               Cow position:
               chr29:29128650-29128835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               183-477
               

               Cow position:
               chr29:24506728-24507034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               47, 81
               

               Conread position:
               197-362
               

               Cow position:
               chr29:26524528-26524364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               200-319
               

               Cow position:
               chr29:1900654-1900535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               13, 63
               

               Conread position:
               204-424
               

               Cow position:
               chr29:22690447-22690671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               8, 55
               

               Conread position:
               226-362
               

               Cow position:
               chr29:42904990-42904855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               176-307
               

               Cow position:
               chr3:2308139-2308267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               176-358
               

               Cow position:
               chr3:75055836-75055653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               41, 13
               

               Conread position:
               176-501
               

               Cow position:
               chr3:3811958-3811630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               35, 12
               

               Conread position:
               177-355
               

               Cow position:
               chr3:31110311-31110489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               56, 82
               

               Conread position:
               177-358
               

               Cow position:
               chr3:44090658-44090481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               177-381
               

               Cow position:
               chr3:81222289-81222492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               188, 9
               

               Conread position:
               177-477
               

               Cow position:
               chr3:8146930-8146615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               81, 87
               

               Conread position:
               178-326
               

               Cow position:
               chr3:52852107-52851962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               178-356
               

               Cow position:
               chr3:6591545-6591729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               61, 88
               

               Conread position:
               178-496
               

               Cow position:
               chr3:23178540-23178875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               242
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               162, 82
               

               Conread position:
               182-363
               

               Cow position:
               chr3:52608807-52608624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               155, 76
               

               Conread position:
               183-495
               

               Cow position:
               chr3:6769941-6769629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 75
               

               Conread position:
               183-501
               

               Cow position:
               chr3:44095318-44095644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               64, 76
               

               Conread position:
               184-501
               

               Cow position:
               chr3:28595697-28595369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               249
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               21, 49
               

               Conread position:
               186-345
               

               Cow position:
               chr3:6644847-6645003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               186-362
               

               Cow position:
               chr3:9770378-9770551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               159, 26
               

               Conread position:
               188-387
               

               Cow position:
               chr3:32578893-32578691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               161, 70
               

               Conread position:
               188-397
               

               Cow position:
               chr3:83458954-83459161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               190, 70
               

               Conread position:
               192-387
               

               Cow position:
               chr3:53210684-53210488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               170, 18
               

               Conread position:
               203-350
               

               Cow position:
               chr3:63151786-63151640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               135, 41
               

               Conread position:
               211-514
               

               Cow position:
               chr3:53211469-53211764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               67, 33
               

               Conread position:
               227-397
               

               Cow position:
               chr3:83980690-83980522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               135, 31
               

               Conread position:
               243-424
               

               Cow position:
               chr3:8464348-8464539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               121, 15
               

               Conread position:
               175-356
               

               Cow position:
               chr4:55648003-55648175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               176-358
               

               Cow position:
               chr4:59265546-59265721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               177-323
               

               Cow position:
               chr4:28227375-28227518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               177-356
               

               Cow position:
               chr4:54377521-54377696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               5, 10
               

               Conread position:
               177-362
               

               Cow position:
               chr4:37857302-37857486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               91, 34
               

               Conread position:
               177-368
               

               Cow position:
               chr4:3901853-3901662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               154, 81
               

               Conread position:
               177-387
               

               Cow position:
               chr4:52336904-52336706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               138, 17
               

               Conread position:
               177-425
               

               Cow position:
               chr4:16942173-16942423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               189
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               219, 81
               

               Conread position:
               178-349
               

               Cow position:
               chr4:59858016-59858184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               160, 42
               

               Conread position:
               178-362
               

               Cow position:
               chr4:49765144-49764957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               178-424
               

               Cow position:
               chr4:18797530-18797782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               189
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               187, 80
               

               Conread position:
               183-309
               

               Cow position:
               chr4:32773654-32773779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               183-318
               

               Cow position:
               chr4:14947476-14947342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               30, 73
               

               Conread position:
               183-355
               

               Cow position:
               chr4:42364768-42364946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               31, 81
               

               Conread position:
               183-356
               

               Cow position:
               chr4:565090-565263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               104, 75
               

               Conread position:
               183-362
               

               Cow position:
               chr4:40249565-40249744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               131, 75
               

               Conread position:
               183-363
               

               Cow position:
               chr4:38951619-38951798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               183-419
               

               Cow position:
               chr4:43283894-43283653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               189
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               60, 77
               

               Conread position:
               202-356
               

               Cow position:
               chr4:4032097-4031945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               137, 56
               

               Conread position:
               203-356
               

               Cow position:
               chr4:165827-165979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               211-496
               

               Cow position:
               chr4:53264977-53264677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               65, 47
               

               Conread position:
               175-356
               

               Cow position:
               chr5:63252274-63252453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               147
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               176-356
               

               Cow position:
               chr5:45196590-45196414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               149
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               176-418
               

               Cow position:
               chr5:49610043-49609806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               111, 40
               

               Conread position:
               177-333
               

               Cow position:
               chr5:59042638-59042792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               5, 10
               

               Conread position:
               177-350
               

               Cow position:
               chr5:47837977-47838150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               142
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               153, 81
               

               Conread position:
               177-356
               

               Cow position:
               chr5:44697042-44697219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               150, 23
               

               Conread position:
               177-363
               

               Cow position:
               chr5:34025003-34024819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               148
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               177-393
               

               Cow position:
               chr5:16177202-16177421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               188, 81
               

               Conread position:
               183-306
               

               Cow position:
               chr5:64185365-64185249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               183-356
               

               Cow position:
               chr5:56269587-56269415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               183-387
               

               Cow position:
               chr5:63793659-63793859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               14, 43
               

               Conread position:
               183-389
               

               Cow position:
               chr5:9520359-9520559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               164, 23
               

               Conread position:
               185-357
               

               Cow position:
               chr5:3396580-3396750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               140
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               186-349
               

               Cow position:
               chr5:51822755-51822592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               27, 73
               

               Conread position:
               187-334
               

               Cow position:
               chr5:59096581-59096726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               187-344
               

               Cow position:
               chr5:47460053-47459901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               20, 39
               

               Conread position:
               197-366
               

               Cow position:
               chr5:49879282-49879116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               141, 35
               

               Conread position:
               198-356
               

               Cow position:
               chr5:59053388-59053545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               206-356
               

               Cow position:
               chr5:59044942-59045091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               210-397
               

               Cow position:
               chr5:63395467-63395277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               47, 37
               

               Conread position:
               212-359
               

               Cow position:
               chr5:39324566-39324420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               220-496
               

               Cow position:
               chr5:20848256-20847961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               139, 38
               

               Conread position:
               221-363
               

               Cow position:
               chr5:57628824-57628683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               254-495
               

               Cow position:
               chr5:9887268-9887528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               108, 245
               

               Conread position:
               175-356
               

               Cow position:
               chr6:63028961-63028781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               7, 12
               

               Conread position:
               176-335
               

               Cow position:
               chr6:67981510-67981672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               49, 36
               

               Conread position:
               176-356
               

               Cow position:
               chr6:17291586-17291765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               176-389
               

               Cow position:
               chr6:35751340-35751553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               186, 43
               

               Conread position:
               176-389
               

               Cow position:
               chr6:60415007-60414795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               36, 84
               

               Conread position:
               177-326
               

               Cow position:
               chr6:5338465-5338617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               177-358
               

               Cow position:
               chr6:26637841-26638016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               149
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               177-358
               

               Cow position:
               chr6:55972524-55972340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               137, 78
               

               Conread position:
               177-500
               

               Cow position:
               chr6:417787-418126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               186, 81
               

               Conread position:
               178-362
               

               Cow position:
               chr6:61409980-61410161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               28, 63
               

               Conread position:
               178-388
               

               Cow position:
               chr6:63012040-63011831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               160, 36
               

               Conread position:
               183-353
               

               Cow position:
               chr6:22817732-22817895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               183-356
               

               Cow position:
               chr6:18414156-18414329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               24, 76
               

               Conread position:
               183-369
               

               Cow position:
               chr6:15264678-15264863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               57, 76
               

               Conread position:
               186-346
               

               Cow position:
               chr6:20284742-20284587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               196-354
               

               Cow position:
               chr6:24186733-24186584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               200-358
               

               Cow position:
               chr6:59218809-59218651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               221-424
               

               Cow position:
               chr6:682084-681879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               37, 153
               

               Conread position:
               177-323
               

               Cow position:
               chr7:21038793-21038938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               5, 13
               

               Conread position:
               177-343
               

               Cow position:
               chr7:65292205-65292366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               120, 9
               

               Conread position:
               177-343
               

               Cow position:
               chr7:65959943-65960105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               120, 80
               

               Conread position:
               177-362
               

               Cow position:
               chr7:50740941-50741124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               148
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               177-387
               

               Cow position:
               chr7:16292212-16292423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               5, 84
               

               Conread position:
               177-393
               

               Cow position:
               chr7:26776369-26776157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               187, 12
               

               Conread position:
               182-368
               

               Cow position:
               chr7:23293291-23293472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               156, 19
               

               Conread position:
               186-385
               

               Cow position:
               chr7:55303245-55303450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               18, 76
               

               Conread position:
               194-368
               

               Cow position:
               chr7:42320794-42320620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               18, 65
               

               Conread position:
               200-352
               

               Cow position:
               chr7:18296128-18295979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               244-362
               

               Cow position:
               chr7:33921082-33920965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               151-387
               

               Cow position:
               chr8:5246950-5246710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               185
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               33, 110
               

               Conread position:
               176-389
               

               Cow position:
               chr8:34835925-34835718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               64, 29
               

               Conread position:
               176-497
               

               Cow position:
               chr8:25386695-25386370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 20
               

               Conread position:
               177-357
               

               Cow position:
               chr8:49882004-49882185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               24, 82
               

               Conread position:
               178-362
               

               Cow position:
               chr8:48674226-48674044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               171, 80
               

               Conread position:
               178-382
               

               Cow position:
               chr8:40114513-40114313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               67, 32
               

               Conread position:
               183-326
               

               Cow position:
               chr8:35479492-35479627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               33, 66
               

               Conread position:
               183-355
               

               Cow position:
               chr8:25797722-25797551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               147, 66
               

               Conread position:
               183-357
               

               Cow position:
               chr8:48454787-48454959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               183-357
               

               Cow position:
               chr8:49672949-49673125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               56, 81
               

               Conread position:
               183-369
               

               Cow position:
               chr8:1649215-1649399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               186-345
               

               Cow position:
               chr8:35558864-35558706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               186-515
               

               Cow position:
               chr8:17430898-17430560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               174, 69
               

               Conread position:
               187-356
               

               Cow position:
               chr8:57724394-57724557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               194-346
               

               Cow position:
               chr8:9292978-9292827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               142, 64
               

               Conread position:
               175-356
               

               Cow position:
               chr9:44718160-44718340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               176-394
               

               Cow position:
               chr9:62925491-62925274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               28, 55
               

               Conread position:
               176-509
               

               Cow position:
               chr9:55033200-55032853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 82
               

               Conread position:
               177-345
               

               Cow position:
               chr9:36420842-36420675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               177-350
               

               Cow position:
               chr9:13453529-13453697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               161, 17
               

               Conread position:
               177-397
               

               Cow position:
               chr9:10896658-10896884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               30, 84
               

               Conread position:
               177-424
               

               Cow position:
               chr9:25032569-25032809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               187, 39
               

               Conread position:
               177-477
               

               Cow position:
               chr9:6317085-6317404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               232
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               187, 81
               

               Conread position:
               177-495
               

               Cow position:
               chr9:6656021-6656355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               240
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               180, 81
               

               Conread position:
               178-358
               

               Cow position:
               chr9:31644056-31644238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               36, 84
               

               Conread position:
               183-391
               

               Cow position:
               chr9:6163900-6163690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               181, 76
               

               Conread position:
               186-344
               

               Cow position:
               chr9:44559659-44559508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               25, 74
               

               Conread position:
               191-358
               

               Cow position:
               chr9:6721586-6721753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               14, 69
               

               Conread position:
               207-362
               

               Cow position:
               chr9:47520141-47520291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               176-326
               

               Cow position:
               chrX:3040240-3040388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               176-356
               

               Cow position:
               chrX:48390089-48389909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               176-362
               

               Cow position:
               chrX:21242888-21243074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               133, 34
               

               Conread position:
               176-424
               

               Cow position:
               chrX:29774652-29774409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               187, 24
               

               Conread position:
               177-357
               

               Cow position:
               chrX:31465976-31466152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               177-424
               

               Cow position:
               chrX:25219150-25218910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               187, 34
               

               Conread position:
               178-411
               

               Cow position:
               chrX:6815803-6815568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               34, 81
               

               Conread position:
               183-356
               

               Cow position:
               chrX:42559382-42559554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               183-357
               

               Cow position:
               chrX:34863324-34863488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               183-361
               

               Cow position:
               chrX:4547397-4547575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               147
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               23, 77
               

               Conread position:
               183-361
               

               Cow position:
               chrX:38739941-38739764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               155, 75
               

               Conread position:
               183-362
               

               Cow position:
               chrX:31908928-31909105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               183-493
               

               Cow position:
               chrX:13259277-13259599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               15, 76
               

               Conread position:
               186-326
               

               Cow position:
               chrX:219827-219692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               186-358
               

               Cow position:
               chrX:25435029-25434859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               152, 16
               

               Conread position:
               206-326
               

               Cow position:
               chrX:15370054-15370173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               207-356
               

               Cow position:
               chrX:25236917-25237065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               131, 52
               

               Conread position:
               207-397
               

               Cow position:
               chrX:31443890-31443701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               137, 41
               

               Conread position:
               232-424
               

               Cow position:
               chrX:38737319-38737507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               132, 16
               

               Conread position:
               241-387
               

               Cow position:
               chrX:18507512-18507660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               96, 17
               

               Conread position:
               253-386
               

               Cow position:
               chrX:17482989-17483125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               112, 0
Conread position:	167-356
Cow position:	chr1:24229941-24229753 (view UCSC Genome Browser custom track)
Alignm length:	191
Alignm identity:	148
Alignm E-value:	1e-37
Alignm gaps (pig, cow):	169, 91
Conread position:	176-362
Cow position:	chr1:79931259-79931084 (view UCSC Genome Browser custom track)
Alignm length:	187
Alignm identity:	143
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	84, 0
Conread position:	176-495
Cow position:	chr1:13797927-13797597 (view UCSC Genome Browser custom track)
Alignm length:	334
Alignm identity:	225
Alignm E-value:	6e-33
Alignm gaps (pig, cow):	187, 82
Conread position:	177-311
Cow position:	chr1:87737370-87737508 (view UCSC Genome Browser custom track)
Alignm length:	139
Alignm identity:	111
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	29, 0
Conread position:	177-326
Cow position:	chr1:28469932-28469786 (view UCSC Genome Browser custom track)
Alignm length:	151
Alignm identity:	117
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	41, 16
Conread position:	177-346
Cow position:	chr1:70256754-70256586 (view UCSC Genome Browser custom track)
Alignm length:	170
Alignm identity:	137
Alignm E-value:	4e-39
Alignm gaps (pig, cow):	81, 0
Conread position:	177-356
Cow position:	chr1:4269471-4269294 (view UCSC Genome Browser custom track)
Alignm length:	180
Alignm identity:	142
Alignm E-value:	3e-38
Alignm gaps (pig, cow):	81, 0
Conread position:	177-369
Cow position:	chr1:60452331-60452523 (view UCSC Genome Browser custom track)
Alignm length:	194
Alignm identity:	152
Alignm E-value:	4.99997e-41
Alignm gaps (pig, cow):	30, 82
Conread position:	177-388
Cow position:	chr1:7435023-7434808 (view UCSC Genome Browser custom track)
Alignm length:	217
Alignm identity:	161
Alignm E-value:	8e-36
Alignm gaps (pig, cow):	86, 81
Conread position:	177-396
Cow position:	chr1:81469011-81469228 (view UCSC Genome Browser custom track)
Alignm length:	224
Alignm identity:	166
Alignm E-value:	2e-34
Alignm gaps (pig, cow):	187, 43
Conread position:	177-476
Cow position:	chr1:78728736-78728421 (view UCSC Genome Browser custom track)
Alignm length:	319
Alignm identity:	225
Alignm E-value:	3e-37
Alignm gaps (pig, cow):	172, 81
Conread position:	177-496
Cow position:	chr1:76660348-76660688 (view UCSC Genome Browser custom track)
Alignm length:	342
Alignm identity:	245
Alignm E-value:	1.96182e-44
Alignm gaps (pig, cow):	19, 177
Conread position:	177-501
Cow position:	chr1:9147716-9147380 (view UCSC Genome Browser custom track)
Alignm length:	340
Alignm identity:	229
Alignm E-value:	7e-34
Alignm gaps (pig, cow):	188, 81
Conread position:	178-349
Cow position:	chr1:91840787-91840957 (view UCSC Genome Browser custom track)
Alignm length:	172
Alignm identity:	135
Alignm E-value:	3e-36
Alignm gaps (pig, cow):	80, 0
Conread position:	178-389
Cow position:	chr1:82422780-82422992 (view UCSC Genome Browser custom track)
Alignm length:	215
Alignm identity:	161
Alignm E-value:	9e-37
Alignm gaps (pig, cow):	86, 81
Conread position:	183-316
Cow position:	chr1:93131126-93131258 (view UCSC Genome Browser custom track)
Alignm length:	134
Alignm identity:	110
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	75, 0
Conread position:	183-346
Cow position:	chr1:17467463-17467624 (view UCSC Genome Browser custom track)
Alignm length:	166
Alignm identity:	121
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	101, 19
Conread position:	183-356
Cow position:	chr1:6971783-6971955 (view UCSC Genome Browser custom track)
Alignm length:	175
Alignm identity:	139
Alignm E-value:	9e-37
Alignm gaps (pig, cow):	24, 77
Conread position:	183-387
Cow position:	chr1:93579823-93580022 (view UCSC Genome Browser custom track)
Alignm length:	206
Alignm identity:	151
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	197, 75
Conread position:	183-389
Cow position:	chr1:39066946-39067148 (view UCSC Genome Browser custom track)
Alignm length:	212
Alignm identity:	158
Alignm E-value:	4e-30
Alignm gaps (pig, cow):	155, 75