Cow genome map

Conread name: Pig2-102I04

Conread position: 1-124
Cow position: chr1:38706770-38706649 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 1-129
Cow position: chr1:10610589-10610463 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 28, 12

Conread position: 1-131
Cow position: chr1:71350643-71350513 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-131
Cow position: chr1:76613051-76612921 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-113
Cow position: chr1:72813702-72813810 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 3-120
Cow position: chr1:48695463-48695348 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 3-121
Cow position: chr1:8134009-8134126 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 3-121
Cow position: chr1:89298025-89297906 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 3-121
Cow position: chr1:89301634-89301515 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 3-122
Cow position: chr1:6381857-6381978 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 3-124
Cow position: chr1:56719426-56719544 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 3-129
Cow position: chr1:90267806-90267933 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 106
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 3-131
Cow position: chr1:53374514-53374639 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 120, 40

Conread position: 4-126
Cow position: chr1:77739809-77739931 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 118, 17

Conread position: 5-95
Cow position: chr1:70146823-70146733 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 78
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-112
Cow position: chr1:87095126-87095019 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-114
Cow position: chr1:49082831-49082940 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-114
Cow position: chr1:54258654-54258763 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-114
Cow position: chr1:76518510-76518619 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-120
Cow position: chr1:852258-852373 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-120
Cow position: chr1:19599273-19599160 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 5-120
Cow position: chr1:47190907-47190793 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 5-121
Cow position: chr1:3666943-3666832 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 5-121
Cow position: chr1:4391183-4391067 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr1:41022507-41022617 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 5-121
Cow position: chr1:43340546-43340432 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 5-121
Cow position: chr1:43352568-43352452 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr1:46245653-46245535 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 5-121
Cow position: chr1:55428868-55428752 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr1:65318663-65318778 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 5-121
Cow position: chr1:71664809-71664693 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr1:72422321-72422205 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr1:73020574-73020461 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 5-121
Cow position: chr1:78029944-78029825 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 5-121
Cow position: chr1:84103973-84103857 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr1:95152959-95153075 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr1:95558125-95558240 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 5-122
Cow position: chr1:95835710-95835593 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr1:14067356-14067239 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 5-124
Cow position: chr1:20202391-20202504 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 5-124
Cow position: chr1:26984097-26984216 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr1:31794921-31794804 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 107, 0

Conread position: 5-124
Cow position: chr1:33720189-33720308 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr1:41953914-41953795 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr1:42482285-42482404 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 94, 45

Conread position: 5-124
Cow position: chr1:74084103-74083984 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr1:77704856-77704737 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr1:98557031-98556914 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 5-127
Cow position: chr1:63994467-63994348 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 5-128
Cow position: chr1:6790859-6790982 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-129
Cow position: chr1:47658433-47658557 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-129
Cow position: chr1:57395419-57395295 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 120, 33

Conread position: 5-129
Cow position: chr1:69411609-69411484 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 116, 77

Conread position: 5-129
Cow position: chr1:81515321-81515448 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 5-129
Cow position: chr1:102797910-102797790 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 110, 90

Conread position: 5-130
Cow position: chr1:5751401-5751525 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 5-130
Cow position: chr1:7443064-7443192 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 5-130
Cow position: chr1:64705987-64706112 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr1:64804014-64803885 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 5-131
Cow position: chr1:83246513-83246639 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr1:96558761-96558635 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-121
Cow position: chr1:1380086-1380202 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 6-121
Cow position: chr1:65160216-65160331 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-121
Cow position: chr1:72068745-72068633 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 6-131
Cow position: chr1:81364349-81364475 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 117, 0

Conread position: 6-131
Cow position: chr1:97986360-97986233 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 7-129
Cow position: chr1:100512984-100513106 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 9-114
Cow position: chr1:73397982-73397877 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-121
Cow position: chr1:79178720-79178832 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 9-124
Cow position: chr1:22823997-22824113 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 9-124
Cow position: chr1:36306767-36306882 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 9-127
Cow position: chr1:6731272-6731386 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 9-127
Cow position: chr1:40303643-40303755 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 9-127
Cow position: chr1:84594980-84595098 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-127
Cow position: chr1:100823129-100823247 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-130
Cow position: chr1:60045077-60045197 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 10-121
Cow position: chr1:62519456-62519567 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-124
Cow position: chr1:36237870-36237984 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 10-124
Cow position: chr1:71665844-71665730 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 10-129
Cow position: chr1:3535163-3535280 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 111, 10

Conread position: 10-129
Cow position: chr1:85622622-85622741 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-131
Cow position: chr1:4618650-4618531 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 10-131
Cow position: chr1:43379269-43379150 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 10-131
Cow position: chr1:81858807-81858690 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 10-131
Cow position: chr1:90879648-90879530 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 10-145
Cow position: chr1:18764529-18764400 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 11-113
Cow position: chr1:66693807-66693708 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 11-121
Cow position: chr1:81391012-81391123 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 11-124
Cow position: chr1:628060-628172 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 11-124
Cow position: chr1:36625609-36625722 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 11-127
Cow position: chr1:20871465-20871348 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 11-129
Cow position: chr1:11107338-11107455 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 11-129
Cow position: chr1:16766994-16766878 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 11-129
Cow position: chr1:53442025-53441906 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 11-129
Cow position: chr1:80312159-80312039 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 11-129
Cow position: chr1:86503270-86503151 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 30, 69

Conread position: 11-129
Cow position: chr1:89146781-89146663 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 11-130
Cow position: chr1:73458004-73457884 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 11-131
Cow position: chr1:10523794-10523909 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 103
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 11-131
Cow position: chr1:50765705-50765825 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 11-131
Cow position: chr1:68710372-68710494 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 15, 115

Conread position: 11-131
Cow position: chr1:74919885-74919764 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 12-121
Cow position: chr1:67585643-67585752 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 12-124
Cow position: chr1:71790055-71789944 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 12-131
Cow position: chr1:79718900-79719019 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 13-131
Cow position: chr1:57089585-57089466 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 110, 100

Conread position: 16-124
Cow position: chr1:20550989-20551097 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 16-129
Cow position: chr1:98380200-98380086 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 25-131
Cow position: chr1:95712663-95712768 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 1-124
Cow position: chr10:31718329-31718207 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 1-124
Cow position: chr10:55382369-55382491 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 1-128
Cow position: chr10:15602127-15602000 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 107
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-131
Cow position: chr10:36856075-36855946 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 3-121
Cow position: chr10:16598745-16598862 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 3-121
Cow position: chr10:33122527-33122409 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-124
Cow position: chr10:2328243-2328365 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 76

Conread position: 3-124
Cow position: chr10:32336075-32336195 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 3-124
Cow position: chr10:35249088-35248966 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 105, 0

Conread position: 3-124
Cow position: chr10:54263278-54263399 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-131
Cow position: chr10:49846831-49846956 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 94, 0

Conread position: 5-116
Cow position: chr10:55235556-55235445 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-120
Cow position: chr10:2462421-2462309 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 5-120
Cow position: chr10:13363821-13363706 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-120
Cow position: chr10:32649194-32649079 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-120
Cow position: chr10:48377340-48377225 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr10:9959274-9959389 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 5-121
Cow position: chr10:14817106-14816990 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr10:16986390-16986506 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr10:19402967-19403084 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 5-121
Cow position: chr10:24422117-24422001 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr10:31528028-31528138 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 5-121
Cow position: chr10:35720167-35720283 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr10:37014692-37014807 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 5-121
Cow position: chr10:48316889-48316773 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr10:61588202-61588086 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr10:10027629-10027748 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 15

Conread position: 5-124
Cow position: chr10:14396598-14396483 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 5-124
Cow position: chr10:17518790-17518671 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr10:18849581-18849697 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 51

Conread position: 5-124
Cow position: chr10:28223271-28223390 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr10:35820279-35820164 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 5-124
Cow position: chr10:36945744-36945625 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 5-125
Cow position: chr10:31004963-31004840 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 5-127
Cow position: chr10:34705335-34705456 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 5-129
Cow position: chr10:38799896-38800019 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 5-130
Cow position: chr10:38370396-38370272 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 5-131
Cow position: chr10:23026550-23026673 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 83

Conread position: 5-131
Cow position: chr10:27544511-27544633 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 5-131
Cow position: chr10:47559496-47559379 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 6-121
Cow position: chr10:35717216-35717101 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-121
Cow position: chr10:58149110-58148999 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 6-131
Cow position: chr10:24863047-24862925 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 9-120
Cow position: chr10:33195104-33195215 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-121
Cow position: chr10:15868314-15868426 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 9-121
Cow position: chr10:35715527-35715416 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 9-124
Cow position: chr10:6719036-6719151 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 9-124
Cow position: chr10:28843420-28843534 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 10-124
Cow position: chr10:19394510-19394392 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 10-124
Cow position: chr10:28571462-28571576 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 10-124
Cow position: chr10:44730415-44730300 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 10-129
Cow position: chr10:19238818-19238700 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 10-131
Cow position: chr10:4711660-4711781 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 10-131
Cow position: chr10:15248979-15248858 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-131
Cow position: chr10:64394142-64394263 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 11-112
Cow position: chr10:23071681-23071580 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 11-121
Cow position: chr10:45871579-45871689 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chr10:5889698-5889585 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 58

Conread position: 11-124
Cow position: chr10:38195913-38195800 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chr10:45378940-45378827 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 11-129
Cow position: chr10:37174389-37174274 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 11-130
Cow position: chr10:45295078-45294960 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 11-130
Cow position: chr10:63757990-63757869 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 11-131
Cow position: chr10:16830322-16830203 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 105
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 21, 0

Conread position: 11-131
Cow position: chr10:18155383-18155504 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 114, 0

Conread position: 11-131
Cow position: chr10:48567663-48567784 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 11-131
Cow position: chr10:64182508-64182623 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 12-123
Cow position: chr10:33915000-33914895 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 12-124
Cow position: chr10:65071384-65071496 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 12-130
Cow position: chr10:47182504-47182385 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 14-129
Cow position: chr10:15298444-15298329 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 16-121
Cow position: chr10:46934712-46934607 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 20-127
Cow position: chr10:8161576-8161683 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 21-121
Cow position: chr10:15383401-15383501 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 31-131
Cow position: chr10:8068195-8068296 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 32-124
Cow position: chr10:42574111-42574203 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-119
Cow position: chr11:64029206-64029090 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 1-120
Cow position: chr11:84385578-84385462 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 1-130
Cow position: chr11:25791634-25791504 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 3-104
Cow position: chr11:63202186-63202085 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-113
Cow position: chr11:67417871-67417980 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 3-118
Cow position: chr11:70483789-70483675 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 3-121
Cow position: chr11:17517461-17517578 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 54, 96

Conread position: 3-121
Cow position: chr11:26057588-26057468 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 3-121
Cow position: chr11:28078556-28078668 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 3-121
Cow position: chr11:63485000-63485111 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 3-121
Cow position: chr11:63849889-63849771 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-122
Cow position: chr11:55744530-55744649 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-124
Cow position: chr11:53460759-53460880 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 30

Conread position: 3-124
Cow position: chr11:60296792-60296920 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 3-127
Cow position: chr11:12555243-12555119 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-130
Cow position: chr11:36361580-36361454 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 3-131
Cow position: chr11:13592798-13592928 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 3-131
Cow position: chr11:68913203-68913332 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 3-131
Cow position: chr11:79666199-79666073 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 4-124
Cow position: chr11:36300518-36300402 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 103
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 4-124
Cow position: chr11:70273524-70273643 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 5-112
Cow position: chr11:899498-899606 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 5-113
Cow position: chr11:2835923-2836031 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-114
Cow position: chr11:13043081-13042976 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 5-116
Cow position: chr11:35109474-35109366 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 96
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 92, 0

Conread position: 5-117
Cow position: chr11:60720391-60720279 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-120
Cow position: chr11:53888586-53888471 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr11:16314937-16315053 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr11:25968790-25968674 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr11:41213114-41213231 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 5-121
Cow position: chr11:69417466-69417582 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr11:17889664-17889545 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr11:44016308-44016427 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr11:51683280-51683398 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 5-124
Cow position: chr11:68592082-68592201 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr11:69035223-69035342 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-127
Cow position: chr11:18119566-18119687 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 5-127
Cow position: chr11:37100108-37099987 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 5-127
Cow position: chr11:66939528-66939406 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-128
Cow position: chr11:25783777-25783902 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 5-128
Cow position: chr11:87172012-87171890 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 5-129
Cow position: chr11:46747796-46747672 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-129
Cow position: chr11:57503542-57503667 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 5-130
Cow position: chr11:24551453-24551579 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 5-131
Cow position: chr11:21830145-21830022 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 5-131
Cow position: chr11:42084611-42084484 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 109
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 5-131
Cow position: chr11:56348766-56348642 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 5-131
Cow position: chr11:67345599-67345470 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 5-131
Cow position: chr11:75479959-75479834 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 111, 0

Conread position: 5-131
Cow position: chr11:76248114-76248235 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 5-133
Cow position: chr11:71303643-71303770 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 5-134
Cow position: chr11:32584884-32585013 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-134
Cow position: chr11:41215797-41215925 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 6-121
Cow position: chr11:35733018-35732904 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 7-127
Cow position: chr11:21637535-21637415 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 8-121
Cow position: chr11:866346-866459 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-121
Cow position: chr11:33369219-33369331 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 9-127
Cow position: chr11:15772645-15772528 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 23, 32

Conread position: 9-127
Cow position: chr11:80370181-80370299 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 9-129
Cow position: chr11:33271499-33271616 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 10-120
Cow position: chr11:33368142-33368249 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 10-124
Cow position: chr11:83042173-83042058 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 10-131
Cow position: chr11:35981073-35980954 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 10-131
Cow position: chr11:63407763-63407883 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 11-121
Cow position: chr11:8828076-8828189 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 11-121
Cow position: chr11:43641457-43641567 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chr11:13940256-13940369 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 63

Conread position: 11-126
Cow position: chr11:44176666-44176777 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 99
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 11-128
Cow position: chr11:26823180-26823299 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 11-130
Cow position: chr11:15369458-15369577 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 11-130
Cow position: chr11:41278256-41278375 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 11-130
Cow position: chr11:64607180-64607058 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 12-121
Cow position: chr11:62889822-62889713 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 12-124
Cow position: chr11:1980196-1980083 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 12-130
Cow position: chr11:50472388-50472506 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 12-131
Cow position: chr11:21124539-21124420 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 12-134
Cow position: chr11:43594357-43594236 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 13-129
Cow position: chr11:13864031-13863913 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 14-131
Cow position: chr11:53816926-53817044 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 21-124
Cow position: chr11:41295143-41295041 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 3-116
Cow position: chr12:7049861-7049972 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 3-121
Cow position: chr12:25193080-25193198 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chr12:40910243-40910128 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 3-124
Cow position: chr12:13995756-13995634 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 3-124
Cow position: chr12:24397122-24397005 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 3-124
Cow position: chr12:41317071-41316950 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-124
Cow position: chr12:43619323-43619443 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 3-129
Cow position: chr12:6719429-6719555 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-130
Cow position: chr12:27563335-27563213 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 4-124
Cow position: chr12:10827828-10827946 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 4-124
Cow position: chr12:11676376-11676496 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr12:9055375-9055259 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr12:12699597-12699481 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 90, 102

Conread position: 5-121
Cow position: chr12:25299403-25299518 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 5-121
Cow position: chr12:35136962-35137078 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 90
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr12:39150008-39149892 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 94, 102

Conread position: 5-121
Cow position: chr12:39320432-39320547 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 5-122
Cow position: chr12:29675098-29674981 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr12:1089349-1089230 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr12:27663949-27663830 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-125
Cow position: chr12:41420822-41420698 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 5-129
Cow position: chr12:15050581-15050460 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 5-131
Cow position: chr12:22047965-22048091 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr12:42973416-42973538 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 7-116
Cow position: chr12:23939263-23939371 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 7-124
Cow position: chr12:44892252-44892369 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 10, 14

Conread position: 9-122
Cow position: chr12:5657979-5657866 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-127
Cow position: chr12:37718723-37718605 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 9-127
Cow position: chr12:37742346-37742464 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 10-120
Cow position: chr12:42749486-42749599 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 10-130
Cow position: chr12:24482293-24482413 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 10-131
Cow position: chr12:18561585-18561706 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 107, 20

Conread position: 11-124
Cow position: chr12:10942337-10942454 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 11-124
Cow position: chr12:26670113-26670227 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 11-125
Cow position: chr12:6206381-6206494 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 111, 0

Conread position: 11-128
Cow position: chr12:4182242-4182125 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 11-129
Cow position: chr12:31948162-31948277 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 11-131
Cow position: chr12:3057137-3057256 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 11-131
Cow position: chr12:37480790-37480670 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 12-124
Cow position: chr12:9482255-9482142 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 12-124
Cow position: chr12:37420455-37420343 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 13-131
Cow position: chr12:8143764-8143647 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 110, 0

Conread position: 21-131
Cow position: chr12:14285257-14285147 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 38-131
Cow position: chr12:35217958-35217865 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-114
Cow position: chr13:28552495-28552384 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 1-121
Cow position: chr13:54128689-54128807 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 1-130
Cow position: chr13:20520222-20520092 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 3-121
Cow position: chr13:15162727-15162845 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chr13:29665926-29665808 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-124
Cow position: chr13:52929340-52929219 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-130
Cow position: chr13:44003606-44003481 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 95

Conread position: 3-131
Cow position: chr13:20174646-20174518 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 107
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 101, 45

Conread position: 3-131
Cow position: chr13:24591502-24591376 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 3-131
Cow position: chr13:37593042-37593165 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 4-124
Cow position: chr13:29507521-29507398 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 5-111
Cow position: chr13:24155417-24155311 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-113
Cow position: chr13:8667522-8667414 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-113
Cow position: chr13:18929432-18929324 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-113
Cow position: chr13:49475981-49475870 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 5-119
Cow position: chr13:584967-585081 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-119
Cow position: chr13:18875039-18874925 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr13:1643980-1644100 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 5-121
Cow position: chr13:20214342-20214225 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 5-121
Cow position: chr13:20854553-20854669 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 20

Conread position: 5-121
Cow position: chr13:27146727-27146611 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr13:27180944-27180828 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr13:40541202-40541318 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr13:43102888-43102772 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr13:3153653-3153535 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 5-124
Cow position: chr13:8637601-8637482 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr13:15114374-15114255 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr13:19223558-19223439 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr13:21246806-21246925 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr13:22115581-22115463 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 5-124
Cow position: chr13:24094411-24094529 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 5-124
Cow position: chr13:24215771-24215889 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 5-124
Cow position: chr13:25978285-25978406 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 5-124
Cow position: chr13:30396622-30396506 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 5-124
Cow position: chr13:34606596-34606477 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 55

Conread position: 5-124
Cow position: chr13:43576917-43576798 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr13:43577894-43577775 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr13:47340233-47340113 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 5-124
Cow position: chr13:52894050-52893936 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 5-126
Cow position: chr13:242538-242416 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 5-128
Cow position: chr13:47676032-47676153 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 5-129
Cow position: chr13:24796780-24796666 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 5-129
Cow position: chr13:34873492-34873367 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 5-130
Cow position: chr13:8362840-8362966 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 36

Conread position: 5-131
Cow position: chr13:369219-369345 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr13:2776191-2776066 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 118, 0

Conread position: 5-131
Cow position: chr13:8537725-8537598 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 109, 0

Conread position: 5-131
Cow position: chr13:8699834-8699962 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 5-131
Cow position: chr13:10989167-10989294 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 23

Conread position: 5-131
Cow position: chr13:13781085-13780958 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 108
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 30, 120

Conread position: 5-131
Cow position: chr13:20042357-20042483 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr13:20115151-20115026 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 118, 0

Conread position: 5-131
Cow position: chr13:48127011-48126885 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 5-133
Cow position: chr13:32283031-32282905 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 6-121
Cow position: chr13:60509218-60509334 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 7-131
Cow position: chr13:25380849-25380724 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 18

Conread position: 8-131
Cow position: chr13:30809474-30809594 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 9-118
Cow position: chr13:13796912-13797023 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 9-121
Cow position: chr13:10925020-10925132 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-124
Cow position: chr13:6113627-6113744 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 9-124
Cow position: chr13:20497545-20497430 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-127
Cow position: chr13:1339242-1339360 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-129
Cow position: chr13:33256400-33256279 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 10-121
Cow position: chr13:22729504-22729615 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 10-124
Cow position: chr13:15993285-15993171 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 10-124
Cow position: chr13:19182772-19182882 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 10-124
Cow position: chr13:23685101-23685215 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 10-124
Cow position: chr13:52641050-52641163 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 10-131
Cow position: chr13:9906629-9906509 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 10-131
Cow position: chr13:27230404-27230517 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 11-124
Cow position: chr13:3149534-3149645 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 11-124
Cow position: chr13:14411792-14411679 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chr13:21955168-21955282 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 11-124
Cow position: chr13:23975265-23975378 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chr13:26482882-26482995 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chr13:28376663-28376774 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 11-124
Cow position: chr13:28605494-28605607 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chr13:49823924-49823811 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 11-128
Cow position: chr13:16476754-16476637 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 11-131
Cow position: chr13:2529053-2529171 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 11-131
Cow position: chr13:10055318-10055197 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 11-131
Cow position: chr13:11146954-11146834 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 12-120
Cow position: chr13:54127930-54128039 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 12-129
Cow position: chr13:17624219-17624100 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 12-131
Cow position: chr13:26100290-26100169 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 80

Conread position: 12-131
Cow position: chr13:31398356-31398238 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 13-130
Cow position: chr13:40483084-40483198 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 15-131
Cow position: chr13:56019101-56019216 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 19-124
Cow position: chr13:37030242-37030137 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-121
Cow position: chr14:25516981-25517100 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 3-114
Cow position: chr14:28378321-28378211 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 3-121
Cow position: chr14:48884861-48884981 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 3-122
Cow position: chr14:18270323-18270206 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 3-124
Cow position: chr14:10937635-10937514 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-124
Cow position: chr14:37504477-37504356 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-130
Cow position: chr14:7198460-7198333 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-131
Cow position: chr14:19988097-19988225 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-131
Cow position: chr14:34775784-34775912 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 4-121
Cow position: chr14:28924129-28924012 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 4-121
Cow position: chr14:39097469-39097351 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 5-119
Cow position: chr14:18412631-18412745 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-120
Cow position: chr14:18941325-18941440 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-120
Cow position: chr14:20466897-20466784 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 5-121
Cow position: chr14:11470188-11470303 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 5-121
Cow position: chr14:12137977-12137864 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 5-121
Cow position: chr14:15944703-15944820 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 5-121
Cow position: chr14:36723370-36723254 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 90
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr14:44713379-44713263 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-122
Cow position: chr14:30023237-30023354 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr14:7342423-7342309 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 5-124
Cow position: chr14:20234233-20234348 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 5-124
Cow position: chr14:27364540-27364421 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr14:35421123-35421243 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 92, 35

Conread position: 5-124
Cow position: chr14:36559266-36559382 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 5-124
Cow position: chr14:39795579-39795466 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 5-129
Cow position: chr14:23419756-23419632 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr14:29282715-29282589 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr14:29592752-29592879 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 6-126
Cow position: chr14:8923625-8923745 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 85

Conread position: 9-120
Cow position: chr14:35381548-35381437 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 9-125
Cow position: chr14:45955247-45955130 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 9-127
Cow position: chr14:2975128-2975245 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 10-124
Cow position: chr14:1803162-1803275 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 10-124
Cow position: chr14:29964975-29964861 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 10-131
Cow position: chr14:34697432-34697313 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 11-124
Cow position: chr14:5668164-5668277 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 11-127
Cow position: chr14:26116016-26115899 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 11-131
Cow position: chr14:45312750-45312633 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 12-124
Cow position: chr14:28304831-28304943 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 13-127
Cow position: chr14:41756111-41755997 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-129
Cow position: chr14:12036874-12036991 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 13-130
Cow position: chr14:12081173-12081288 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 14-131
Cow position: chr14:12071573-12071691 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 15-128
Cow position: chr14:15518450-15518564 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 21-113
Cow position: chr14:41706476-41706568 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 78
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 21-130
Cow position: chr14:27044842-27044952 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 3-121
Cow position: chr15:21941836-21941954 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 91
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chr15:36904315-36904196 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 3-122
Cow position: chr15:16667486-16667605 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-124
Cow position: chr15:40562673-40562792 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 3-126
Cow position: chr15:38228146-38228024 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 3-133
Cow position: chr15:17621309-17621439 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 35, 17

Conread position: 4-128
Cow position: chr15:14760629-14760753 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-117
Cow position: chr15:16657480-16657368 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-119
Cow position: chr15:85238-85350 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 5-120
Cow position: chr15:28067699-28067811 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 5-121
Cow position: chr15:12913491-12913605 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 5-121
Cow position: chr15:22443977-22444093 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr15:27280646-27280531 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 5-121
Cow position: chr15:30956316-30956430 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 5-121
Cow position: chr15:35642022-35641906 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr15:17124461-17124580 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr15:20649575-20649456 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 102
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr15:29927974-29927855 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr15:36539951-36539835 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 5-124
Cow position: chr15:43634022-43634139 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 5-124
Cow position: chr15:48095368-48095247 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 5-124
Cow position: chr15:52728442-52728564 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 5-128
Cow position: chr15:20534443-20534566 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-130
Cow position: chr15:37237676-37237551 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 120, 24

Conread position: 5-131
Cow position: chr15:50552524-50552649 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 118, 0

Conread position: 5-131
Cow position: chr15:51831782-51831908 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 6-119
Cow position: chr15:39405750-39405638 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 6-124
Cow position: chr15:21710101-21710218 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 9-111
Cow position: chr15:17196151-17196049 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-121
Cow position: chr15:20459305-20459417 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-124
Cow position: chr15:52791946-52791831 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-126
Cow position: chr15:12045534-12045652 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 9-130
Cow position: chr15:23572683-23572804 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 9-131
Cow position: chr15:25690695-25690575 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 9-131
Cow position: chr15:32324202-32324324 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-124
Cow position: chr15:4284376-4284262 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-129
Cow position: chr15:36435207-36435088 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 10-130
Cow position: chr15:25366059-25366180 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 10-131
Cow position: chr15:8715180-8715298 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 10-131
Cow position: chr15:43827768-43827888 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 11-120
Cow position: chr15:7750911-7751019 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 11-124
Cow position: chr15:19553923-19554035 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 11-124
Cow position: chr15:22938761-22938876 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 11-124
Cow position: chr15:26380743-26380856 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 11-129
Cow position: chr15:667177-667062 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 11-129
Cow position: chr15:42380929-42380814 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 11-130
Cow position: chr15:16415298-16415181 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 11-131
Cow position: chr15:11564300-11564183 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 12-124
Cow position: chr15:20566131-20566019 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 12-124
Cow position: chr15:33729890-33729776 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 12-124
Cow position: chr15:40159645-40159757 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-120
Cow position: chr15:15147206-15147313 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 13-124
Cow position: chr15:38652601-38652712 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-131
Cow position: chr15:10632309-10632428 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 10, 96

Conread position: 15-124
Cow position: chr15:42142873-42142764 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 96
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 21-124
Cow position: chr15:18784756-18784653 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-131
Cow position: chr16:7928306-7928176 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 3-113
Cow position: chr16:4910444-4910334 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-119
Cow position: chr16:5382262-5382380 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 3-121
Cow position: chr16:13996115-13996000 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 3-121
Cow position: chr16:38663630-38663512 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-124
Cow position: chr16:24636133-24636011 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 3-124
Cow position: chr16:30055021-30054901 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 3-127
Cow position: chr16:33073805-33073683 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 3-131
Cow position: chr16:8288869-8288745 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 5-113
Cow position: chr16:31241211-31241104 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 5-116
Cow position: chr16:17617280-17617169 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-119
Cow position: chr16:29037998-29038111 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 5-120
Cow position: chr16:258203-258088 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-120
Cow position: chr16:25419171-25419056 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr16:7665720-7665836 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr16:9615135-9615019 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 90
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr16:12220764-12220882 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 5-121
Cow position: chr16:19282088-19282203 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 5-121
Cow position: chr16:28233222-28233109 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 5-121
Cow position: chr16:31558984-31559100 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-122
Cow position: chr16:14841443-14841561 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 5-122
Cow position: chr16:35297484-35297599 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 5-124
Cow position: chr16:2751055-2751173 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 5-124
Cow position: chr16:11083080-11083195 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 5-124
Cow position: chr16:14210698-14210583 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 5-124
Cow position: chr16:15714192-15714311 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr16:28444407-28444288 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr16:44138410-44138292 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 5-124
Cow position: chr16:50409328-50409447 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-129
Cow position: chr16:34998543-34998418 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 5-130
Cow position: chr16:10011770-10011643 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 5-131
Cow position: chr16:3049071-3048946 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 5-131
Cow position: chr16:4277471-4277346 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 5-131
Cow position: chr16:8065805-8065679 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr16:13698598-13698724 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr16:16477284-16477407 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 5-131
Cow position: chr16:31493132-31493255 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 5-131
Cow position: chr16:45603829-45603954 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 6-116
Cow position: chr16:7812774-7812884 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 87
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-131
Cow position: chr16:31471761-31471885 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 6-131
Cow position: chr16:40029800-40029680 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 6-131
Cow position: chr16:52365822-52365696 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 7-131
Cow position: chr16:7442018-7441895 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 116, 0

Conread position: 8-131
Cow position: chr16:27003955-27004079 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 9-117
Cow position: chr16:33290471-33290579 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-121
Cow position: chr16:32301919-32301806 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 9-124
Cow position: chr16:9097110-9097225 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-124
Cow position: chr16:43308476-43308366 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 9-127
Cow position: chr16:17180247-17180361 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 9-127
Cow position: chr16:34153484-34153367 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 9-127
Cow position: chr16:56595303-56595185 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-129
Cow position: chr16:10032949-10033069 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 9-131
Cow position: chr16:56082278-56082156 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 10-120
Cow position: chr16:18048067-18047957 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-124
Cow position: chr16:10249731-10249617 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 10-124
Cow position: chr16:47274639-47274525 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-127
Cow position: chr16:47835008-47835121 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 10-129
Cow position: chr16:48455760-48455876 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 10-131
Cow position: chr16:17745924-17746050 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 40, 99

Conread position: 11-122
Cow position: chr16:27051134-27051245 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chr16:23564221-23564337 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 11-124
Cow position: chr16:29311612-29311727 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 11-127
Cow position: chr16:15407470-15407353 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 112, 0

Conread position: 11-129
Cow position: chr16:44144477-44144595 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 27

Conread position: 11-130
Cow position: chr16:25610113-25610232 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 112, 10

Conread position: 11-130
Cow position: chr16:26842835-26842955 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 11-131
Cow position: chr16:45348475-45348596 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 12-124
Cow position: chr16:4077960-4077841 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 12-124
Cow position: chr16:21442522-21442410 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 26, 98

Conread position: 12-124
Cow position: chr16:39030009-39029894 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 26

Conread position: 12-130
Cow position: chr16:24672774-24672655 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 12-131
Cow position: chr16:51477469-51477590 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 12-131
Cow position: chr16:56690048-56689928 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 112

Conread position: 13-121
Cow position: chr16:16232147-16232255 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-124
Cow position: chr16:3032626-3032515 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-130
Cow position: chr16:31575235-31575352 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-131
Cow position: chr16:20205552-20205665 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 14-121
Cow position: chr16:30368736-30368629 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 16-131
Cow position: chr16:31573335-31573452 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 19-129
Cow position: chr16:32142185-32142297 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 21-121
Cow position: chr16:11634767-11634867 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 26-120
Cow position: chr16:17209203-17209108 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 2-121
Cow position: chr17:26448662-26448779 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 2-124
Cow position: chr17:25718261-25718382 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 3-118
Cow position: chr17:3387838-3387952 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 3-119
Cow position: chr17:21959567-21959449 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 3-121
Cow position: chr17:21236643-21236761 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-127
Cow position: chr17:11921044-11920920 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 4-126
Cow position: chr17:27855430-27855311 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 94

Conread position: 4-131
Cow position: chr17:32220762-32220636 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 5-109
Cow position: chr17:14025787-14025683 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-116
Cow position: chr17:1463208-1463097 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-116
Cow position: chr17:3918890-3919001 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-119
Cow position: chr17:4271240-4271125 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 5-119
Cow position: chr17:32143209-32143323 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr17:6787059-6787176 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 5-121
Cow position: chr17:7571226-7571342 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 90
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr17:18673917-18673801 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr17:21181574-21181690 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr17:5898404-5898285 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr17:7864947-7865064 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 5-124
Cow position: chr17:10630860-10630742 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 5-124
Cow position: chr17:20157730-20157847 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 5-124
Cow position: chr17:26183467-26183586 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 27, 36

Conread position: 5-124
Cow position: chr17:26225150-26225267 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 5-124
Cow position: chr17:27292334-27292215 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr17:32027329-32027208 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 5-124
Cow position: chr17:32278784-32278665 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr17:32280788-32280907 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr17:40355381-40355500 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr17:43323422-43323303 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-126
Cow position: chr17:24826963-24826842 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-129
Cow position: chr17:15883794-15883919 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 5-130
Cow position: chr17:7803052-7802927 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr17:4817650-4817776 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr17:11397788-11397913 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 52

Conread position: 5-131
Cow position: chr17:15334373-15334248 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 118, 0

Conread position: 5-131
Cow position: chr17:25702724-25702850 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr17:30156298-30156173 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 120, 69

Conread position: 5-131
Cow position: chr17:37973944-37973812 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 5-131
Cow position: chr17:43957783-43957906 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 5-133
Cow position: chr17:24841818-24841945 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 8-131
Cow position: chr17:9260485-9260365 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 9-121
Cow position: chr17:13414241-13414129 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-129
Cow position: chr17:25467109-25467236 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 9-130
Cow position: chr17:14668629-14668751 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 33

Conread position: 10-129
Cow position: chr17:25118012-25118131 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-130
Cow position: chr17:20359240-20359359 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 25, 113

Conread position: 10-130
Cow position: chr17:26231082-26231209 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 121

Conread position: 10-130
Cow position: chr17:30494032-30493912 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-131
Cow position: chr17:24559418-24559539 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-131
Cow position: chr17:33067442-33067321 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 11-117
Cow position: chr17:22772998-22772890 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 11-121
Cow position: chr17:44797805-44797915 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chr17:10037536-10037649 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chr17:28795854-28795741 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 11-130
Cow position: chr17:36814490-36814610 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 11-131
Cow position: chr17:5762025-5761903 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 11-131
Cow position: chr17:32978804-32978691 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 12-124
Cow position: chr17:31559699-31559810 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 12-129
Cow position: chr17:10222080-10221963 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 13-124
Cow position: chr17:39964006-39964117 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-130
Cow position: chr17:27795784-27795900 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 13-131
Cow position: chr17:25342610-25342494 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 14-131
Cow position: chr17:17772289-17772174 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 1-121
Cow position: chr18:35950081-35950207 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 1-124
Cow position: chr18:37690195-37690316 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 3-93
Cow position: chr18:2774091-2774002 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 3-119
Cow position: chr18:28540065-28539950 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 26, 93

Conread position: 3-124
Cow position: chr18:2144618-2144735 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 3-129
Cow position: chr18:697175-697049 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 4-124
Cow position: chr18:40028266-40028389 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 5-95
Cow position: chr18:23821783-23821693 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 80
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-117
Cow position: chr18:47417046-47417158 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-120
Cow position: chr18:2108296-2108409 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 13

Conread position: 5-120
Cow position: chr18:7965278-7965393 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr18:1735549-1735436 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 5-121
Cow position: chr18:32960126-32960241 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 5-121
Cow position: chr18:52251808-52251692 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr18:52382953-52383069 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 65

Conread position: 5-124
Cow position: chr18:14871556-14871439 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 5-124
Cow position: chr18:35171397-35171514 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 5-124
Cow position: chr18:37031878-37031997 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr18:38211205-38211324 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr18:45573429-45573546 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 5-128
Cow position: chr18:5632317-5632434 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 5-129
Cow position: chr18:51976069-51976192 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 33

Conread position: 5-130
Cow position: chr18:22045365-22045240 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-130
Cow position: chr18:52387171-52387047 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 5-131
Cow position: chr18:21751427-21751552 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 5-131
Cow position: chr18:35235974-35235848 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 120, 33

Conread position: 5-131
Cow position: chr18:44514135-44514262 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 5-131
Cow position: chr18:53053185-53053056 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 5-132
Cow position: chr18:19796874-19796744 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 5-139
Cow position: chr18:56155562-56155696 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-118
Cow position: chr18:3412411-3412523 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-119
Cow position: chr18:48112917-48112805 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 109, 32

Conread position: 6-121
Cow position: chr18:55692866-55692980 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 7-124
Cow position: chr18:20391256-20391371 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 8-122
Cow position: chr18:39662829-39662944 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 101
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 9-121
Cow position: chr18:31557107-31556995 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 9-121
Cow position: chr18:51757146-51757256 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 9-124
Cow position: chr18:7956201-7956314 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 9-124
Cow position: chr18:8208372-8208258 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 9-124
Cow position: chr18:10214137-10214026 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 9-127
Cow position: chr18:5189640-5189523 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 9-131
Cow position: chr18:3164461-3164341 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 9-131
Cow position: chr18:4537520-4537401 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 9-131
Cow position: chr18:4538232-4538113 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 9-131
Cow position: chr18:34389331-34389208 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 113, 0

Conread position: 10-124
Cow position: chr18:21528702-21528815 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 10-124
Cow position: chr18:26354991-26354876 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 11-124
Cow position: chr18:29371922-29372035 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 11-128
Cow position: chr18:27078919-27079036 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 11-129
Cow position: chr18:39623855-39623974 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 11-131
Cow position: chr18:238061-237941 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 11-131
Cow position: chr18:42438104-42437985 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 12-124
Cow position: chr18:23810064-23809956 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 12-124
Cow position: chr18:50959542-50959654 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 12-127
Cow position: chr18:29945592-29945704 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 12-131
Cow position: chr18:16659376-16659256 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 16-127
Cow position: chr18:51396439-51396329 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 32-131
Cow position: chr18:30385439-30385339 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 1-124
Cow position: chr19:25382620-25382495 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 3-121
Cow position: chr19:34166436-34166552 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 3-124
Cow position: chr19:41718895-41718775 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 23

Conread position: 3-124
Cow position: chr19:49290388-49290271 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 4-129
Cow position: chr19:33654960-33655083 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 121, 93

Conread position: 4-131
Cow position: chr19:24137338-24137459 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 5-111
Cow position: chr19:38021510-38021616 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-116
Cow position: chr19:24220436-24220327 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 5-120
Cow position: chr19:11211207-11211092 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-120
Cow position: chr19:42776502-42776617 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr19:729676-729564 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 103
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 5-121
Cow position: chr19:4328804-4328689 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 5-121
Cow position: chr19:5912889-5912773 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr19:13439542-13439658 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr19:14588476-14588589 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 5-121
Cow position: chr19:15969742-15969858 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 90
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr19:35072982-35072867 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 5-121
Cow position: chr19:38410939-38411053 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 5-121
Cow position: chr19:39698357-39698471 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 5-121
Cow position: chr19:54105524-54105640 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr19:16686913-16686795 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 5-124
Cow position: chr19:23416812-23416693 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr19:35246013-35246132 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr19:38637716-38637597 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr19:48729162-48729045 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 5-127
Cow position: chr19:17354929-17355049 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 5-127
Cow position: chr19:20622725-20622847 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-128
Cow position: chr19:8185274-8185396 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 5-129
Cow position: chr19:1791627-1791502 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 5-129
Cow position: chr19:19738071-19738195 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-129
Cow position: chr19:38111536-38111660 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 91, 47

Conread position: 5-129
Cow position: chr19:42217245-42217120 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 33, 59

Conread position: 5-129
Cow position: chr19:51294217-51294093 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr19:4537193-4537073 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 5-131
Cow position: chr19:14253703-14253829 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr19:29139273-29139399 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr19:30227591-30227716 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 104, 0

Conread position: 6-121
Cow position: chr19:12761031-12760916 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 7-120
Cow position: chr19:6477981-6478095 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 50, 84

Conread position: 9-121
Cow position: chr19:12801472-12801361 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 9-124
Cow position: chr19:7558618-7558733 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 9-126
Cow position: chr19:2221000-2220883 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 9-127
Cow position: chr19:21244140-21244029 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 9-128
Cow position: chr19:24068209-24068090 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 10-124
Cow position: chr19:19468460-19468573 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 10-124
Cow position: chr19:30943189-30943077 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 10-132
Cow position: chr19:36790538-36790660 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chr19:12497080-12497193 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chr19:23831420-23831536 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 11-124
Cow position: chr19:51621103-51620990 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-121
Cow position: chr19:30007264-30007369 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 13-124
Cow position: chr19:7794727-7794837 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 13-124
Cow position: chr19:55392221-55392110 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 13-130
Cow position: chr19:31763574-31763689 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 14-131
Cow position: chr19:12945226-12945110 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 28-124
Cow position: chr19:34026644-34026548 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 80
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-121
Cow position: chr2:44313640-44313520 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-124
Cow position: chr2:6267690-6267567 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-111
Cow position: chr2:16332127-16332235 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 2-141
Cow position: chr2:29974718-29974577 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 3-113
Cow position: chr2:16669549-16669658 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 3-114
Cow position: chr2:29394928-29394817 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-117
Cow position: chr2:40597650-40597764 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-119
Cow position: chr2:78116282-78116166 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-120
Cow position: chr2:39864504-39864621 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chr2:2437529-2437414 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 103, 0

Conread position: 3-121
Cow position: chr2:59396973-59396855 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-122
Cow position: chr2:69579598-69579479 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-124
Cow position: chr2:10628455-10628333 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 3-124
Cow position: chr2:46053551-46053672 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-124
Cow position: chr2:58070073-58070194 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-124
Cow position: chr2:70771802-70771679 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 3-127
Cow position: chr2:3728107-3728225 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 3-127
Cow position: chr2:5300677-5300800 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 3-128
Cow position: chr2:46202344-46202470 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 17

Conread position: 3-129
Cow position: chr2:13468296-13468420 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 3-129
Cow position: chr2:22759897-22759770 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 3-129
Cow position: chr2:33711908-33711778 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 3-130
Cow position: chr2:74198250-74198122 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 3-131
Cow position: chr2:32660258-32660387 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 3-131
Cow position: chr2:67810962-67810834 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 110
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 4-124
Cow position: chr2:11163145-11163023 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 34, 21

Conread position: 5-116
Cow position: chr2:39483566-39483677 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-119
Cow position: chr2:47165749-47165636 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 5-120
Cow position: chr2:1410054-1409939 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-120
Cow position: chr2:38662619-38662501 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 5-120
Cow position: chr2:66027639-66027754 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr2:2098230-2098115 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 94, 80

Conread position: 5-121
Cow position: chr2:6039096-6039211 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 5-121
Cow position: chr2:9062760-9062876 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr2:15348476-15348592 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr2:19211974-19211865 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 5-121
Cow position: chr2:54700539-54700653 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 5-121
Cow position: chr2:56021394-56021511 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 33

Conread position: 5-124
Cow position: chr2:1364516-1364398 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 5-124
Cow position: chr2:16513935-16514054 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr2:35934963-35935088 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 5-124
Cow position: chr2:44063693-44063579 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 5-124
Cow position: chr2:67480058-67480186 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 5-127
Cow position: chr2:31355780-31355901 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 111, 0

Conread position: 5-128
Cow position: chr2:27178727-27178850 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-128
Cow position: chr2:36376941-36377063 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 5-130
Cow position: chr2:38700299-38700177 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 5-130
Cow position: chr2:49345075-49345199 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 118, 0

Conread position: 5-130
Cow position: chr2:55387648-55387774 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 118, 0

Conread position: 5-131
Cow position: chr2:15058981-15058857 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 5-131
Cow position: chr2:38953906-38954039 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 5-131
Cow position: chr2:45799847-45799720 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 36, 24

Conread position: 5-131
Cow position: chr2:67302099-67302224 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 5-131
Cow position: chr2:68328770-68328646 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 5-131
Cow position: chr2:75331745-75331619 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-121
Cow position: chr2:81913081-81913195 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 7-119
Cow position: chr2:49717004-49716892 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 9-121
Cow position: chr2:67595933-67595821 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-124
Cow position: chr2:36124517-36124632 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 9-124
Cow position: chr2:69109262-69109146 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 10-111
Cow position: chr2:46204604-46204705 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-120
Cow position: chr2:82374519-82374630 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 10-128
Cow position: chr2:8843741-8843621 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 10-129
Cow position: chr2:13369742-13369862 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 101
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 115, 0

Conread position: 10-130
Cow position: chr2:50862491-50862611 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-131
Cow position: chr2:35299416-35299537 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 10-131
Cow position: chr2:69780082-69779962 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 10-131
Cow position: chr2:72359547-72359425 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 11-124
Cow position: chr2:9726014-9725901 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 9

Conread position: 11-124
Cow position: chr2:41351097-41350986 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 74, 44

Conread position: 11-124
Cow position: chr2:73923901-73924014 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 11-127
Cow position: chr2:33560587-33560472 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 11-127
Cow position: chr2:44022717-44022601 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 11-130
Cow position: chr2:44215590-44215705 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 11-131
Cow position: chr2:25284124-25284243 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 11-131
Cow position: chr2:29290228-29290112 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 11-131
Cow position: chr2:35466448-35466329 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 11-131
Cow position: chr2:70598640-70598765 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 97

Conread position: 11-132
Cow position: chr2:67745331-67745456 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 11-135
Cow position: chr2:49862742-49862865 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 109, 0

Conread position: 12-124
Cow position: chr2:84344060-84343949 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 12-128
Cow position: chr2:19104700-19104592 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 12-128
Cow position: chr2:76313779-76313663 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 12-129
Cow position: chr2:19017541-19017659 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 12-130
Cow position: chr2:28452856-28452744 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 12-133
Cow position: chr2:13544078-13544196 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 13-120
Cow position: chr2:42897756-42897863 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-124
Cow position: chr2:14218742-14218853 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-130
Cow position: chr2:40508506-40508387 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 110, 0

Conread position: 13-131
Cow position: chr2:42476142-42476028 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 14-124
Cow position: chr2:72315721-72315613 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 15-129
Cow position: chr2:23935485-23935597 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 399-498
Cow position: chr2:4675425-4675322 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 1-121
Cow position: chr20:39016751-39016631 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-121
Cow position: chr20:40303766-40303644 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 1-124
Cow position: chr20:28249301-28249424 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-116
Cow position: chr20:20459713-20459825 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 3-119
Cow position: chr20:18763257-18763373 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chr20:5078395-5078515 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 38, 77

Conread position: 3-121
Cow position: chr20:6054386-6054269 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 3-124
Cow position: chr20:20124911-20124790 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-124
Cow position: chr20:36741586-36741703 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 3-132
Cow position: chr20:41323241-41323113 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 5-118
Cow position: chr20:10200471-10200584 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-119
Cow position: chr20:34097828-34097712 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 5-121
Cow position: chr20:4945129-4945012 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 5-121
Cow position: chr20:5365051-5365166 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 5-121
Cow position: chr20:9034094-9033978 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr20:14283045-14283161 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr20:25021552-25021669 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 5-121
Cow position: chr20:25953390-25953505 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 5-121
Cow position: chr20:37357981-37358097 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr20:5950518-5950399 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr20:18500652-18500771 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr20:35310451-35310571 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 5-131
Cow position: chr20:11008295-11008420 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 118, 0

Conread position: 5-131
Cow position: chr20:13829385-13829508 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 5-131
Cow position: chr20:17524397-17524523 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 91, 102

Conread position: 5-131
Cow position: chr20:34202760-34202890 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 5-131
Cow position: chr20:34918530-34918656 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-132
Cow position: chr20:13876586-13876460 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 5-133
Cow position: chr20:26055102-26054974 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-117
Cow position: chr20:20892552-20892441 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-124
Cow position: chr20:33435031-33434918 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 10-121
Cow position: chr20:28935515-28935404 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 10-124
Cow position: chr20:29754906-29755019 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 98
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 10-124
Cow position: chr20:37609750-37609864 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-131
Cow position: chr20:39694968-39694845 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 10-144
Cow position: chr20:17606837-17606703 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 99
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 11-120
Cow position: chr20:17733428-17733319 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 11-121
Cow position: chr20:32067362-32067251 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 11-124
Cow position: chr20:5268712-5268599 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chr20:8679532-8679419 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 11-131
Cow position: chr20:24883233-24883112 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 12-127
Cow position: chr20:1139636-1139521 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-121
Cow position: chr20:27323399-27323507 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-124
Cow position: chr20:19201664-19201775 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 20-131
Cow position: chr20:4891979-4891870 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 1-131
Cow position: chr21:44829617-44829487 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chr21:30970079-30970194 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 3-121
Cow position: chr21:34737303-34737420 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 3-124
Cow position: chr21:3585224-3585102 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 59, 37

Conread position: 3-124
Cow position: chr21:29418712-29418835 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 3-127
Cow position: chr21:16796995-16797117 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 105
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 95

Conread position: 3-131
Cow position: chr21:5476723-5476851 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 97
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 4-121
Cow position: chr21:9278670-9278787 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 4-121
Cow position: chr21:31278330-31278447 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-113
Cow position: chr21:31258612-31258720 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-118
Cow position: chr21:8545877-8545764 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-119
Cow position: chr21:8430954-8430840 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-120
Cow position: chr21:24350993-24351109 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 5-120
Cow position: chr21:42227553-42227439 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 5-121
Cow position: chr21:12739224-12739347 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 5-121
Cow position: chr21:14464729-14464845 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr21:26828828-26828712 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr21:37706269-37706153 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 90
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr21:40475644-40475760 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr21:44251697-44251582 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 5-122
Cow position: chr21:11353206-11353324 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 99, 0

Conread position: 5-124
Cow position: chr21:3135723-3135606 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 5-124
Cow position: chr21:10004740-10004621 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr21:16099419-16099298 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 5-124
Cow position: chr21:27677626-27677745 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr21:34209870-34209752 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 5-127
Cow position: chr21:41621271-41621393 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-129
Cow position: chr21:48482384-48482263 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 5-130
Cow position: chr21:41482830-41482705 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr21:11006624-11006499 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 5-131
Cow position: chr21:34727347-34727472 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 117, 0

Conread position: 7-128
Cow position: chr21:18568491-18568371 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 7-131
Cow position: chr21:10264180-10264305 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 116, 0

Conread position: 9-118
Cow position: chr21:17193599-17193492 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 9-126
Cow position: chr21:6291896-6292013 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-127
Cow position: chr21:4108925-4109042 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 9-129
Cow position: chr21:28882331-28882450 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 9-131
Cow position: chr21:15444935-15444812 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 116, 0

Conread position: 9-131
Cow position: chr21:30231549-30231426 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 113, 0

Conread position: 10-124
Cow position: chr21:1464494-1464605 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 28, 35

Conread position: 10-124
Cow position: chr21:13588911-13589024 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 10-131
Cow position: chr21:15305148-15305026 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 10-131
Cow position: chr21:18578420-18578299 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 11-112
Cow position: chr21:47784744-47784845 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chr21:12348917-12349030 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 11-129
Cow position: chr21:49144851-49144733 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 11-131
Cow position: chr21:17890454-17890572 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 11-131
Cow position: chr21:32648037-32647917 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 11-131
Cow position: chr21:46809614-46809496 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 12-124
Cow position: chr21:8713807-8713695 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 12-124
Cow position: chr21:20585525-20585414 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 13-124
Cow position: chr21:42501204-42501314 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 13-131
Cow position: chr21:22718630-22718514 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 14-131
Cow position: chr21:20153108-20153226 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 15-131
Cow position: chr21:23535865-23535982 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 16-130
Cow position: chr21:24296611-24296497 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 16-131
Cow position: chr21:19236814-19236699 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-124
Cow position: chr22:1714790-1714667 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-124
Cow position: chr22:36209328-36209451 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chr22:22860835-22860719 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 3-121
Cow position: chr22:23735938-23735820 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chr22:29219829-29219710 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 4-121
Cow position: chr22:14488013-14488130 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 4-128
Cow position: chr22:35665797-35665672 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 114, 0

Conread position: 4-129
Cow position: chr22:1776138-1776264 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 121, 0

Conread position: 4-131
Cow position: chr22:6149313-6149186 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-110
Cow position: chr22:18441160-18441265 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-113
Cow position: chr22:14378617-14378508 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 5-114
Cow position: chr22:36762117-36762223 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 5-119
Cow position: chr22:2704377-2704489 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 5-120
Cow position: chr22:3470368-3470480 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 91, 53

Conread position: 5-120
Cow position: chr22:4157003-4156889 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 29, 11

Conread position: 5-120
Cow position: chr22:9983749-9983634 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-120
Cow position: chr22:12673256-12673141 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-120
Cow position: chr22:30606935-30607050 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr22:2409053-2408937 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr22:3061028-3061143 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 5-121
Cow position: chr22:4083981-4083865 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 90
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr22:6204346-6204230 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 90
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr22:9372600-9372718 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 5-121
Cow position: chr22:11790062-11790178 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr22:14641780-14641664 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr22:14676764-14676880 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr22:18926435-18926548 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 5-121
Cow position: chr22:30293767-30293882 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 5-121
Cow position: chr22:39472079-39471963 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 90
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr22:43131479-43131362 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 5-124
Cow position: chr22:1065183-1065302 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr22:4736102-4736221 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr22:5595732-5595613 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr22:12678343-12678226 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 5-124
Cow position: chr22:12929201-12929083 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 5-124
Cow position: chr22:16541573-16541454 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr22:19305977-19306096 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr22:27681800-27681919 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr22:47820517-47820633 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 5-128
Cow position: chr22:45104192-45104066 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 5-129
Cow position: chr22:12637679-12637801 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 5-130
Cow position: chr22:9075486-9075612 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 5-130
Cow position: chr22:16533151-16533274 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 120, 92

Conread position: 5-131
Cow position: chr22:7140723-7140850 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 5-131
Cow position: chr22:13866744-13866869 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 118, 0

Conread position: 5-131
Cow position: chr22:30615809-30615933 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 6-121
Cow position: chr22:11697115-11697003 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 6-121
Cow position: chr22:27275542-27275657 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 8-130
Cow position: chr22:14600254-14600132 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 9-116
Cow position: chr22:1046109-1046001 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 9-119
Cow position: chr22:12389182-12389292 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 9-121
Cow position: chr22:32698843-32698955 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-129
Cow position: chr22:1074347-1074467 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 9-131
Cow position: chr22:40120798-40120671 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 10-124
Cow position: chr22:11601116-11601230 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-124
Cow position: chr22:28290424-28290538 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 10-124
Cow position: chr22:30074690-30074577 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 10

Conread position: 10-130
Cow position: chr22:3937144-3937262 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 10-131
Cow position: chr22:5644343-5644222 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-131
Cow position: chr22:6203032-6203152 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 113, 0

Conread position: 10-131
Cow position: chr22:12829527-12829407 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 109, 53

Conread position: 10-131
Cow position: chr22:29962070-29961950 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 11-118
Cow position: chr22:13670085-13669978 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chr22:25312594-25312710 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 11-124
Cow position: chr22:33447996-33447883 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 11-129
Cow position: chr22:7414969-7414848 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 11-129
Cow position: chr22:19413952-19413834 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 11-129
Cow position: chr22:39446376-39446494 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 11-131
Cow position: chr22:33414440-33414320 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 12-120
Cow position: chr22:41025841-41025949 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 12-130
Cow position: chr22:35215634-35215752 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 12-131
Cow position: chr22:16639390-16639510 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 13-128
Cow position: chr22:3541031-3540921 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 14-130
Cow position: chr22:14120935-14120818 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 87

Conread position: 15-121
Cow position: chr22:35578690-35578584 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 15-124
Cow position: chr22:35627436-35627545 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 23-131
Cow position: chr22:23180948-23180844 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 1-121
Cow position: chr23:1480720-1480840 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-120
Cow position: chr23:25864615-25864497 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 18

Conread position: 3-119
Cow position: chr23:9726459-9726343 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-120
Cow position: chr23:32621368-32621485 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-131
Cow position: chr23:34314873-34314743 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 13

Conread position: 5-120
Cow position: chr23:17792340-17792227 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 5-120
Cow position: chr23:18739379-18739264 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr23:38112-38228 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr23:307540-307656 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr23:2471087-2471203 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 90
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr23:4416203-4416087 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 90
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr23:4521800-4521683 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 5-121
Cow position: chr23:4803043-4803161 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 73, 36

Conread position: 5-121
Cow position: chr23:30617394-30617278 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr23:39813584-39813700 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 90
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr23:3890490-3890371 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 13, 34

Conread position: 5-124
Cow position: chr23:4291439-4291558 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr23:10853130-10853248 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 5-124
Cow position: chr23:27307830-27307949 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-127
Cow position: chr23:5617658-5617779 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 5-129
Cow position: chr23:18611680-18611557 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 5-130
Cow position: chr23:1337224-1337100 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 5-130
Cow position: chr23:11081340-11081466 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 118, 0

Conread position: 5-131
Cow position: chr23:21539239-21539365 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 7-129
Cow position: chr23:32126389-32126510 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 116, 0

Conread position: 9-120
Cow position: chr23:19822380-19822269 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-121
Cow position: chr23:3244831-3244717 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 9-127
Cow position: chr23:35239439-35239555 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 9-131
Cow position: chr23:1739543-1739665 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 9-131
Cow position: chr23:33232613-33232492 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 10-124
Cow position: chr23:9942567-9942453 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-124
Cow position: chr23:40965892-40965778 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-127
Cow position: chr23:5605352-5605469 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-127
Cow position: chr23:5612612-5612729 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-131
Cow position: chr23:13410671-13410553 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 11-117
Cow position: chr23:16582819-16582713 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 11-120
Cow position: chr23:2186974-2186865 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 11-129
Cow position: chr23:5436913-5436795 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 11-131
Cow position: chr23:37948777-37948900 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 27, 52

Conread position: 13-124
Cow position: chr23:799576-799465 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 13-124
Cow position: chr23:9876906-9876798 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 57

Conread position: 13-127
Cow position: chr23:20557752-20557638 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 13-129
Cow position: chr23:35527172-35527287 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 13-130
Cow position: chr23:5314619-5314736 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 85

Conread position: 3-109
Cow position: chr24:21196693-21196587 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-116
Cow position: chr24:7917326-7917213 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-119
Cow position: chr24:18405225-18405110 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 3-121
Cow position: chr24:2992825-2992709 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 3-121
Cow position: chr24:5152579-5152697 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chr24:11028633-11028516 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 3-121
Cow position: chr24:43373116-43373232 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 3-124
Cow position: chr24:25194320-25194440 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 29

Conread position: 5-119
Cow position: chr24:22079518-22079632 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr24:12241776-12241892 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr24:18750765-18750881 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr24:22420018-22420133 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 5-121
Cow position: chr24:38693821-38693706 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 5-121
Cow position: chr24:43027169-43027053 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 95

Conread position: 5-124
Cow position: chr24:11836346-11836227 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr24:18702456-18702574 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 5-128
Cow position: chr24:2261725-2261848 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr24:20801288-20801164 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 5-131
Cow position: chr24:23637745-23637621 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 17, 93

Conread position: 6-121
Cow position: chr24:22567162-22567277 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-124
Cow position: chr24:43445955-43445837 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 86, 31

Conread position: 7-121
Cow position: chr24:39910974-39910860 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-121
Cow position: chr24:4635106-4634994 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 9-124
Cow position: chr24:20017366-20017251 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-127
Cow position: chr24:35210116-35210236 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 10-124
Cow position: chr24:390166-390274 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 10-124
Cow position: chr24:11921848-11921734 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-124
Cow position: chr24:25947799-25947685 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 10-131
Cow position: chr24:16994944-16995059 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 10-131
Cow position: chr24:27280243-27280361 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 78

Conread position: 10-131
Cow position: chr24:34006146-34006024 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 108, 83

Conread position: 11-129
Cow position: chr24:21606615-21606497 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 11-129
Cow position: chr24:23046834-23046716 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 11-130
Cow position: chr24:18734318-18734200 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 11-131
Cow position: chr24:16640974-16641094 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 11-131
Cow position: chr24:26001451-26001568 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 11-131
Cow position: chr24:38428049-38427929 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 12-125
Cow position: chr24:22155392-22155505 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 27

Conread position: 12-130
Cow position: chr24:27066293-27066411 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 111, 63

Conread position: 12-131
Cow position: chr24:6008106-6007991 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 13-124
Cow position: chr24:19000105-19000217 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 14-129
Cow position: chr24:10031640-10031753 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 16-131
Cow position: chr24:18874754-18874639 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 100
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 2-106
Cow position: chr25:18568140-18568036 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-129
Cow position: chr25:21547235-21547358 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 3-131
Cow position: chr25:14225440-14225570 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 4-124
Cow position: chr25:22373411-22373290 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 5-109
Cow position: chr25:11855470-11855366 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-120
Cow position: chr25:36369898-36370013 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-120
Cow position: chr25:36375589-36375704 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr25:6812155-6812034 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 5-121
Cow position: chr25:7311316-7311201 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 5-121
Cow position: chr25:8410954-8410840 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 5-121
Cow position: chr25:9494785-9494902 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 5-121
Cow position: chr25:22642344-22642466 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 5-124
Cow position: chr25:11956884-11957000 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 5-124
Cow position: chr25:12305356-12305475 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr25:30319373-30319252 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 5-126
Cow position: chr25:33686605-33686484 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-129
Cow position: chr25:17725113-17725236 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 5-131
Cow position: chr25:7185196-7185069 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 118, 0

Conread position: 5-131
Cow position: chr25:31514261-31514386 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 118, 0

Conread position: 6-121
Cow position: chr25:18201848-18201736 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 7-128
Cow position: chr25:432966-432848 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 9-121
Cow position: chr25:1838325-1838436 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 10-113
Cow position: chr25:13384567-13384671 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 10-120
Cow position: chr25:17119827-17119936 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 94
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 10-124
Cow position: chr25:12092699-12092815 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 10-124
Cow position: chr25:14457234-14457348 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-130
Cow position: chr25:13380516-13380396 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 92
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-131
Cow position: chr25:26269632-26269511 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 11-116
Cow position: chr25:40904744-40904639 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 11-131
Cow position: chr25:12817736-12817856 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 12-129
Cow position: chr25:22154111-22154233 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 12-131
Cow position: chr25:35052535-35052415 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 13-124
Cow position: chr25:30462235-30462125 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 14-124
Cow position: chr25:33272724-33272834 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 94
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 16-119
Cow position: chr25:5808036-5808139 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 17-131
Cow position: chr25:11096146-11096032 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-114
Cow position: chr26:16801076-16801190 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 3-120
Cow position: chr26:27482469-27482352 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chr26:19671573-19671689 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 3-121
Cow position: chr26:33475793-33475911 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chr26:34026940-34026822 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-124
Cow position: chr26:10608675-10608793 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 109, 29

Conread position: 3-131
Cow position: chr26:11968039-11967905 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 92, 56

Conread position: 5-114
Cow position: chr26:28243928-28244036 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 5-120
Cow position: chr26:12028138-12028024 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 5-121
Cow position: chr26:4807653-4807769 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr26:9662133-9662017 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr26:16166596-16166482 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 5-121
Cow position: chr26:16550087-16550199 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 5-121
Cow position: chr26:28202660-28202544 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr26:31711969-31711853 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr26:1041098-1041217 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr26:16423691-16423808 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 5-124
Cow position: chr26:23097095-23096978 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 5-124
Cow position: chr26:25029632-25029751 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr26:32830179-32830298 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr26:33253217-33253102 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 5-130
Cow position: chr26:4167255-4167130 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 37, 119

Conread position: 5-131
Cow position: chr26:3930435-3930309 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr26:6741651-6741525 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr26:34114361-34114486 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 6-121
Cow position: chr26:26919633-26919748 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-120
Cow position: chr26:15908661-15908550 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-127
Cow position: chr26:10740149-10740025 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 10-124
Cow position: chr26:21418353-21418238 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 19, 10

Conread position: 11-124
Cow position: chr26:10764317-10764429 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 11-124
Cow position: chr26:19146004-19146118 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 11-131
Cow position: chr26:8811576-8811696 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 11-131
Cow position: chr26:25504566-25504686 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 111, 18

Conread position: 12-129
Cow position: chr26:7148199-7148081 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 21, 13

Conread position: 12-131
Cow position: chr26:11672403-11672522 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 24-129
Cow position: chr26:31205199-31205307 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 1-124
Cow position: chr27:21101412-21101534 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 3-113
Cow position: chr27:23554450-23554560 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-117
Cow position: chr27:28896757-28896643 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-120
Cow position: chr27:30914886-30914769 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chr27:10979739-10979621 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-124
Cow position: chr27:26793907-26794026 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 3-124
Cow position: chr27:31443932-31443814 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 3-129
Cow position: chr27:5553346-5553224 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 120, 76

Conread position: 3-131
Cow position: chr27:21978263-21978392 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 17

Conread position: 3-131
Cow position: chr27:29308223-29308095 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 23

Conread position: 3-132
Cow position: chr27:31373093-31373222 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 4-131
Cow position: chr27:28254114-28253987 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-115
Cow position: chr27:2592416-2592304 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 5-120
Cow position: chr27:11982771-11982886 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr27:672542-672425 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 5-121
Cow position: chr27:24303821-24303704 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 95

Conread position: 5-121
Cow position: chr27:28472816-28472932 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr27:10404240-10404359 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr27:11208680-11208799 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr27:19074147-19074265 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 5-124
Cow position: chr27:20266351-20266468 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 5-124
Cow position: chr27:26481319-26481439 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 5-125
Cow position: chr27:26112041-26112161 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-127
Cow position: chr27:31157686-31157564 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 118, 15

Conread position: 5-130
Cow position: chr27:19779751-19779629 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 5-131
Cow position: chr27:24331595-24331466 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 60, 122

Conread position: 5-131
Cow position: chr27:26467684-26467811 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 120, 0

Conread position: 9-121
Cow position: chr27:14269455-14269569 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 9-129
Cow position: chr27:18558231-18558111 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-125
Cow position: chr27:18791642-18791757 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-131
Cow position: chr27:20785993-20785872 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 10-131
Cow position: chr27:20825921-20826046 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 10-131
Cow position: chr27:29877604-29877725 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chr27:22614729-22614613 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 11-129
Cow position: chr27:9504424-9504306 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 11-131
Cow position: chr27:16275811-16275929 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 11-131
Cow position: chr27:20045762-20045647 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 11-131
Cow position: chr27:21054328-21054208 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 12-124
Cow position: chr27:6752048-6751936 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 12-131
Cow position: chr27:10323713-10323595 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 13-124
Cow position: chr27:23232781-23232670 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-133
Cow position: chr27:27012565-27012443 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 111, 0

Conread position: 15-124
Cow position: chr27:27438641-27438750 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 16-127
Cow position: chr27:27740427-27740538 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-128
Cow position: chr27:30374720-30374827 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 87

Conread position: 20-130
Cow position: chr27:18543848-18543740 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 1-131
Cow position: chr28:10252834-10252705 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 108
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 2-120
Cow position: chr28:11743744-11743629 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 3-114
Cow position: chr28:7644826-7644937 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-116
Cow position: chr28:10480723-10480608 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 3-121
Cow position: chr28:6283406-6283290 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 3-121
Cow position: chr28:14242781-14242896 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 3-121
Cow position: chr28:17738068-17737950 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chr28:32014869-32014985 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 3-124
Cow position: chr28:14657798-14657919 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-124
Cow position: chr28:17680707-17680828 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 39

Conread position: 3-127
Cow position: chr28:13371056-13370933 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 3-131
Cow position: chr28:16964882-16964753 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 120, 0

Conread position: 4-121
Cow position: chr28:24767490-24767608 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 105

Conread position: 5-93
Cow position: chr28:4022760-4022848 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 76
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-117
Cow position: chr28:3311137-3311025 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-119
Cow position: chr28:26826306-26826420 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 89
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-120
Cow position: chr28:4282404-4282290 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 5-120
Cow position: chr28:6301168-6301283 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-120
Cow position: chr28:11562159-11562044 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr28:117675-117558 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 5-121
Cow position: chr28:118697-118814 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 5-121
Cow position: chr28:3011183-3011067 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr28:4163496-4163380 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr28:5630183-5630299 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr28:6563810-6563694 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr28:10495214-10495100 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 5-121
Cow position: chr28:17620275-17620159 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-122
Cow position: chr28:27721780-27721897 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr28:3726122-3726005 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 85, 36

Conread position: 5-124
Cow position: chr28:11398710-11398591 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr28:16200656-16200537 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr28:17739909-17740028 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-128
Cow position: chr28:10615859-10615743 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 5-128
Cow position: chr28:18761923-18761801 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 5-144
Cow position: chr28:16857020-16856882 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 130, 32

Conread position: 6-121
Cow position: chr28:2892340-2892456 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 9-121
Cow position: chr28:9100017-9100128 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 9-121
Cow position: chr28:16159780-16159670 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 9-121
Cow position: chr28:19128084-19127972 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-122
Cow position: chr28:6124171-6124059 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 9-127
Cow position: chr28:28765812-28765697 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 9-128
Cow position: chr28:13356280-13356159 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 9-130
Cow position: chr28:8165125-8165003 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 9-130
Cow position: chr28:19994859-19994738 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 13, 115

Conread position: 9-131
Cow position: chr28:21263248-21263364 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 10-116
Cow position: chr28:13527287-13527393 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 94
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 28, 89

Conread position: 10-124
Cow position: chr28:3484676-3484789 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 10-124
Cow position: chr28:4937150-4937036 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 10-124
Cow position: chr28:21766047-21766158 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 10-124
Cow position: chr28:24698782-24698896 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 89
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-124
Cow position: chr28:34830246-34830357 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 10-127
Cow position: chr28:20173926-20174044 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 10-127
Cow position: chr28:24672357-24672473 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 10-129
Cow position: chr28:8347823-8347942 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 11-118
Cow position: chr28:10896328-10896438 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 11-124
Cow position: chr28:23460235-23460347 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 11-128
Cow position: chr28:751318-751434 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 112, 0

Conread position: 11-131
Cow position: chr28:15295329-15295448 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 93, 38

Conread position: 11-131
Cow position: chr28:30921967-30921847 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 12-128
Cow position: chr28:27941689-27941574 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 12-131
Cow position: chr28:8716294-8716170 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 13-131
Cow position: chr28:19262492-19262374 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 17-131
Cow position: chr28:7523318-7523206 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 1-131
Cow position: chr29:5046729-5046857 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 32, 97

Conread position: 3-121
Cow position: chr29:16200400-16200282 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chr29:41530928-41531045 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 3-124
Cow position: chr29:8841367-8841252 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 3-129
Cow position: chr29:33321425-33321551 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-130
Cow position: chr29:22690303-22690430 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-131
Cow position: chr29:31929065-31929191 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 119, 39

Conread position: 4-121
Cow position: chr29:3711453-3711570 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 4-131
Cow position: chr29:35259064-35259185 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 5-111
Cow position: chr29:24365819-24365713 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-117
Cow position: chr29:6337730-6337841 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 5-119
Cow position: chr29:15947247-15947361 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-120
Cow position: chr29:18878401-18878289 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 5-120
Cow position: chr29:37618386-37618501 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-120
Cow position: chr29:38732233-38732348 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr29:4741311-4741195 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 97, 102

Conread position: 5-121
Cow position: chr29:23874540-23874656 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 5-122
Cow position: chr29:32656514-32656631 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr29:24604976-24605093 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 5-124
Cow position: chr29:30227202-30227083 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-126
Cow position: chr29:6716434-6716313 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 5-128
Cow position: chr29:5520405-5520283 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 5-131
Cow position: chr29:23142254-23142129 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 118, 0

Conread position: 5-131
Cow position: chr29:24187985-24187858 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 120, 0

Conread position: 5-131
Cow position: chr29:42405027-42405152 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 118, 0

Conread position: 5-131
Cow position: chr29:44937919-44937789 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 5-132
Cow position: chr29:4441125-4441000 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 6-124
Cow position: chr29:12025395-12025282 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 6-124
Cow position: chr29:17297217-17297335 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 6-131
Cow position: chr29:30441017-30441141 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 27, 117

Conread position: 9-127
Cow position: chr29:8163745-8163627 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 10-127
Cow position: chr29:24971416-24971532 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 10-131
Cow position: chr29:23735003-23734882 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 11-120
Cow position: chr29:22534047-22534156 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chr29:22019101-22018989 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 102, 21

Conread position: 11-124
Cow position: chr29:28420841-28420954 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 11-128
Cow position: chr29:41844166-41844049 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 11-131
Cow position: chr29:7955905-7955785 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 112

Conread position: 11-131
Cow position: chr29:31489405-31489528 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 13-120
Cow position: chr29:24119412-24119305 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-124
Cow position: chr29:22068648-22068544 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 32-131
Cow position: chr29:9924468-9924369 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-121
Cow position: chr3:48468227-48468347 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 2-131
Cow position: chr3:84601705-84601576 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-114
Cow position: chr3:70632200-70632311 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-120
Cow position: chr3:42355720-42355834 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 3-120
Cow position: chr3:76300827-76300944 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chr3:3556601-3556719 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chr3:14558813-14558931 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chr3:29943912-29944031 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 3-122
Cow position: chr3:68624273-68624391 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 3-124
Cow position: chr3:2648454-2648334 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 3-124
Cow position: chr3:43091147-43091264 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 37

Conread position: 3-124
Cow position: chr3:59947721-59947842 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-130
Cow position: chr3:22899677-22899551 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 3-130
Cow position: chr3:59040625-59040751 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 122, 14

Conread position: 3-131
Cow position: chr3:11281822-11281950 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 4-121
Cow position: chr3:52487677-52487800 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 4-121
Cow position: chr3:58452099-58452216 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 4-121
Cow position: chr3:58497714-58497831 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 4-131
Cow position: chr3:6547480-6547607 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-116
Cow position: chr3:62312853-62312964 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-116
Cow position: chr3:62370112-62370223 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-117
Cow position: chr3:56754478-56754368 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 5-119
Cow position: chr3:67942478-67942364 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 31, 36

Conread position: 5-120
Cow position: chr3:210377-210492 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-120
Cow position: chr3:20888606-20888491 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-120
Cow position: chr3:59271888-59272001 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 5-120
Cow position: chr3:63069308-63069191 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 5-121
Cow position: chr3:3656572-3656686 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 21, 93

Conread position: 5-121
Cow position: chr3:11254110-11253994 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr3:18700053-18699937 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr3:55318839-55318727 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 5-121
Cow position: chr3:59317758-59317871 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 31, 44

Conread position: 5-121
Cow position: chr3:59392070-59391954 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-122
Cow position: chr3:44960000-44960117 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-122
Cow position: chr3:70756584-70756467 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr3:1011546-1011666 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 20

Conread position: 5-124
Cow position: chr3:9663114-9662995 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr3:15973624-15973744 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 5-124
Cow position: chr3:22078133-22078252 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr3:43389070-43388951 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr3:48900275-48900156 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr3:51150186-51150304 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 93

Conread position: 5-124
Cow position: chr3:55106091-55105972 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr3:72027694-72027813 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr3:76138515-76138633 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 5-124
Cow position: chr3:80910653-80910771 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 5-127
Cow position: chr3:55730411-55730288 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 118, 0

Conread position: 5-127
Cow position: chr3:76168574-76168452 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 5-129
Cow position: chr3:635235-635357 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 5-129
Cow position: chr3:23920371-23920247 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-129
Cow position: chr3:60371040-60371163 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 5-129
Cow position: chr3:72342303-72342427 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-130
Cow position: chr3:21866980-21866858 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 5-131
Cow position: chr3:33453-33324 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 5-131
Cow position: chr3:3453637-3453763 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr3:15443671-15443545 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr3:18764159-18764286 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 5-131
Cow position: chr3:29234623-29234496 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 102

Conread position: 5-131
Cow position: chr3:42483986-42484108 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 5-131
Cow position: chr3:61023965-61023840 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 112, 0

Conread position: 5-131
Cow position: chr3:62789897-62789769 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 5-131
Cow position: chr3:68303372-68303499 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 5-131
Cow position: chr3:72649933-72649806 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 120

Conread position: 5-131
Cow position: chr3:82195542-82195666 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 120, 27

Conread position: 6-124
Cow position: chr3:58562757-58562875 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 16, 32

Conread position: 7-131
Cow position: chr3:17952652-17952772 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 9-130
Cow position: chr3:19044709-19044588 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-131
Cow position: chr3:25702280-25702149 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 9-132
Cow position: chr3:25735844-25735721 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 10-120
Cow position: chr3:63860548-63860440 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 10-124
Cow position: chr3:35883872-35883758 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-124
Cow position: chr3:59926692-59926807 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 10-129
Cow position: chr3:31554996-31555114 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 22

Conread position: 10-129
Cow position: chr3:44218828-44218947 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 10-130
Cow position: chr3:53604683-53604564 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 10-131
Cow position: chr3:9718189-9718068 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-131
Cow position: chr3:61680377-61680498 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 10-131
Cow position: chr3:66563845-66563966 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 10-131
Cow position: chr3:72626683-72626561 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 11-121
Cow position: chr3:42933544-42933654 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 95
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 11-123
Cow position: chr3:12090736-12090850 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 11-124
Cow position: chr3:4071708-4071595 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chr3:24468321-24468210 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 11-124
Cow position: chr3:29334349-29334237 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 11-130
Cow position: chr3:24304570-24304447 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 117

Conread position: 11-130
Cow position: chr3:53910172-53910286 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 11-131
Cow position: chr3:8147462-8147342 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 11, 60

Conread position: 11-131
Cow position: chr3:22888953-22888833 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 27, 63

Conread position: 11-131
Cow position: chr3:23733408-23733290 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 64, 88

Conread position: 11-131
Cow position: chr3:52147380-52147261 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 63

Conread position: 12-124
Cow position: chr3:21694289-21694401 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 26, 62

Conread position: 12-130
Cow position: chr3:7408500-7408618 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-120
Cow position: chr3:13882456-13882348 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 13-131
Cow position: chr3:30463112-30462996 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 14-124
Cow position: chr3:70333905-70333795 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 14-124
Cow position: chr3:79893431-79893322 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 14-130
Cow position: chr3:986079-986195 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 15-131
Cow position: chr3:2636869-2636753 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 15-131
Cow position: chr3:51153111-51153225 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 20-131
Cow position: chr3:68648246-68648358 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 21-124
Cow position: chr3:29385940-29386043 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 32-129
Cow position: chr3:33460517-33460420 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 32-129
Cow position: chr3:72910993-72910896 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-120
Cow position: chr4:32561900-32562018 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 3-120
Cow position: chr4:45723318-45723435 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chr4:40995803-40995921 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chr4:41900037-41900153 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 3-121
Cow position: chr4:43436335-43436453 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chr4:43710085-43709969 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 3-121
Cow position: chr4:44024471-44024352 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 3-124
Cow position: chr4:2774792-2774913 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-124
Cow position: chr4:42347557-42347677 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 3-131
Cow position: chr4:12127566-12127442 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 3-131
Cow position: chr4:45250043-45250170 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 4-129
Cow position: chr4:50687792-50687670 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 4-133
Cow position: chr4:203071-202942 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 119, 67

Conread position: 5-114
Cow position: chr4:44772968-44772859 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-119
Cow position: chr4:12473921-12474036 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 5-119
Cow position: chr4:13284454-13284569 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 5-120
Cow position: chr4:53050066-53050181 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr4:13668547-13668431 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr4:19199212-19199096 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr4:22101190-22101074 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr4:45629972-45629857 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 5-121
Cow position: chr4:46656204-46656321 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 5-121
Cow position: chr4:60761712-60761828 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-122
Cow position: chr4:25802765-25802882 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr4:3299721-3299608 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 5-124
Cow position: chr4:22138146-22138026 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 5-124
Cow position: chr4:51617924-51617806 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 5-126
Cow position: chr4:43909836-43909956 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 118, 0

Conread position: 5-127
Cow position: chr4:23271357-23271477 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 5-127
Cow position: chr4:47035650-47035527 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 118, 0

Conread position: 5-129
Cow position: chr4:45742014-45741890 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 92

Conread position: 5-130
Cow position: chr4:1985722-1985847 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-130
Cow position: chr4:38822244-38822122 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 5-131
Cow position: chr4:5790717-5790843 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr4:9444612-9444485 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 106
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 5-131
Cow position: chr4:23451019-23450892 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 118, 0

Conread position: 5-131
Cow position: chr4:30935288-30935162 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr4:46235090-46234965 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 5-131
Cow position: chr4:50837776-50837901 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 119, 31

Conread position: 5-131
Cow position: chr4:54315151-54315025 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-134
Cow position: chr4:26959894-26959766 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 9-121
Cow position: chr4:67393170-67393282 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-127
Cow position: chr4:45483877-45483997 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 17

Conread position: 9-127
Cow position: chr4:56852926-56853046 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 93

Conread position: 9-131
Cow position: chr4:23444968-23444842 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 119

Conread position: 10-124
Cow position: chr4:38949455-38949338 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 10-130
Cow position: chr4:16091241-16091121 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 11-120
Cow position: chr4:2713779-2713671 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 11-120
Cow position: chr4:27691593-27691484 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chr4:27521633-27521750 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 11-130
Cow position: chr4:5250268-5250387 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 11-130
Cow position: chr4:36876778-36876660 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 101
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 65, 43

Conread position: 11-131
Cow position: chr4:33388938-33389060 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 11-131
Cow position: chr4:45963964-45964087 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 12-124
Cow position: chr4:17076199-17076087 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 12-130
Cow position: chr4:7043738-7043621 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 12-131
Cow position: chr4:25197413-25197293 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 13-121
Cow position: chr4:50131599-50131709 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 13-124
Cow position: chr4:19543022-19543133 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-129
Cow position: chr4:11186046-11186163 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 13-131
Cow position: chr4:51986496-51986377 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 16-124
Cow position: chr4:6072969-6072861 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 21-131
Cow position: chr4:23809715-23809605 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 22-131
Cow position: chr4:33273257-33273148 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 94
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-122
Cow position: chr5:35247006-35246884 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 3-119
Cow position: chr5:54555081-54554965 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 31, 38

Conread position: 3-124
Cow position: chr5:36868841-36868962 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 91, 106

Conread position: 3-128
Cow position: chr5:42064311-42064436 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-130
Cow position: chr5:26097395-26097522 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 109, 37

Conread position: 3-131
Cow position: chr5:62543945-62544069 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 5-113
Cow position: chr5:53980646-53980538 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-119
Cow position: chr5:57526821-57526707 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-119
Cow position: chr5:62011791-62011902 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 5-120
Cow position: chr5:24108952-24108837 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-120
Cow position: chr5:37572450-37572335 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-120
Cow position: chr5:41935549-41935434 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr5:58825-58708 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 5-121
Cow position: chr5:26149142-26149257 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 5-121
Cow position: chr5:29256601-29256486 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 5-121
Cow position: chr5:43434896-43434780 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr5:43839891-43839775 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr5:49821536-49821653 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 5-121
Cow position: chr5:51012108-51012222 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 5-121
Cow position: chr5:56643175-56643290 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 44

Conread position: 5-121
Cow position: chr5:58519308-58519194 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 5-121
Cow position: chr5:63763772-63763887 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 5-121
Cow position: chr5:65140407-65140522 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 5-124
Cow position: chr5:7057294-7057172 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 5-124
Cow position: chr5:34347627-34347508 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr5:40122502-40122383 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr5:40740221-40740101 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 5-124
Cow position: chr5:45854605-45854726 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 5-124
Cow position: chr5:50723154-50723273 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr5:54340874-54340991 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 5-124
Cow position: chr5:55943608-55943493 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 5-124
Cow position: chr5:58487483-58487598 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 5-124
Cow position: chr5:61593372-61593489 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 5-124
Cow position: chr5:62996065-62996184 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr5:72867158-72867277 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-128
Cow position: chr5:50703941-50703818 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-129
Cow position: chr5:60514921-60514795 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 5-130
Cow position: chr5:17062973-17062849 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 5-131
Cow position: chr5:12902025-12902151 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr5:35229035-35228912 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 5-131
Cow position: chr5:44582661-44582528 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 5-131
Cow position: chr5:44810131-44810005 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr5:55783855-55783729 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr5:55949571-55949446 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 5-131
Cow position: chr5:57399145-57399019 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr5:57447558-57447432 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 6-114
Cow position: chr5:56428465-56428357 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 6-121
Cow position: chr5:17987786-17987671 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 96, 101

Conread position: 6-121
Cow position: chr5:35208370-35208485 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-121
Cow position: chr5:56624408-56624292 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 6-121
Cow position: chr5:61049441-61049556 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 8-137
Cow position: chr5:57687471-57687342 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-124
Cow position: chr5:59662946-59662832 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 9-125
Cow position: chr5:35235577-35235461 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-131
Cow position: chr5:55756303-55756181 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 9-131
Cow position: chr5:74690142-74690020 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 10-117
Cow position: chr5:59517145-59517040 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 10-120
Cow position: chr5:20128165-20128275 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-121
Cow position: chr5:13471221-13471331 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 10-121
Cow position: chr5:32672722-32672611 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 10-121
Cow position: chr5:41226893-41226782 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 10-121
Cow position: chr5:45337308-45337198 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 10-124
Cow position: chr5:55749925-55749811 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 10-124
Cow position: chr5:55965781-55965667 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 10-131
Cow position: chr5:25446998-25447119 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 10

Conread position: 10-131
Cow position: chr5:71445503-71445625 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 11-120
Cow position: chr5:14550470-14550361 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chr5:30492680-30492566 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 11-124
Cow position: chr5:43611812-43611924 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 11-129
Cow position: chr5:32975446-32975327 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 11-131
Cow position: chr5:59335884-59336005 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 11-133
Cow position: chr5:54712956-54712833 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 111, 0

Conread position: 12-113
Cow position: chr5:54753136-54753035 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 12-124
Cow position: chr5:53824999-53824888 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 12-131
Cow position: chr5:7012736-7012617 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 12-131
Cow position: chr5:47870937-47870822 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 13-124
Cow position: chr5:43815701-43815591 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 13-127
Cow position: chr5:39937231-39937344 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 13-130
Cow position: chr5:19561332-19561214 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 13-130
Cow position: chr5:47888615-47888499 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 7

Conread position: 14-139
Cow position: chr5:66659626-66659755 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 17-121
Cow position: chr5:56578819-56578923 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 17-131
Cow position: chr5:12761001-12760889 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 19-121
Cow position: chr5:41757733-41757835 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 26-124
Cow position: chr5:17026322-17026420 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 32-131
Cow position: chr5:28456113-28456013 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 1-121
Cow position: chr6:24110399-24110519 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-122
Cow position: chr6:15937737-15937616 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-120
Cow position: chr6:26054785-26054666 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 3-121
Cow position: chr6:23381549-23381431 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chr6:31928756-31928874 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chr6:54840388-54840265 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 3-124
Cow position: chr6:57467716-57467837 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-128
Cow position: chr6:62437534-62437659 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-130
Cow position: chr6:46173139-46173015 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 3-133
Cow position: chr6:56986531-56986401 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 4-128
Cow position: chr6:63251803-63251679 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 4-129
Cow position: chr6:57079544-57079669 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-114
Cow position: chr6:30688390-30688281 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 21

Conread position: 5-119
Cow position: chr6:21184103-21183990 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 5-120
Cow position: chr6:16016155-16016269 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 5-120
Cow position: chr6:19045744-19045862 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 5-121
Cow position: chr6:18447396-18447280 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr6:22876809-22876693 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr6:28088926-28088812 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 5-121
Cow position: chr6:44544027-44543912 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 5-121
Cow position: chr6:54828201-54828085 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr6:58697510-58697394 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr6:12669217-12669336 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 20

Conread position: 5-124
Cow position: chr6:15242958-15243077 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr6:16137649-16137529 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 5-124
Cow position: chr6:21052328-21052208 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 5-124
Cow position: chr6:24776260-24776376 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 5-124
Cow position: chr6:28562047-28561930 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 5-124
Cow position: chr6:33302516-33302634 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 55

Conread position: 5-124
Cow position: chr6:36225230-36225348 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 5-124
Cow position: chr6:49685939-49686058 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-130
Cow position: chr6:3952640-3952765 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr6:13742107-13742232 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 5-131
Cow position: chr6:19563362-19563234 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 5-131
Cow position: chr6:54820953-54821079 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr6:57299880-57300015 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 6-121
Cow position: chr6:59569609-59569723 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 58, 93

Conread position: 7-127
Cow position: chr6:51019272-51019392 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-133
Cow position: chr6:26764704-26764574 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 8-120
Cow position: chr6:28559663-28559774 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 9-124
Cow position: chr6:41147345-41147457 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 9-124
Cow position: chr6:65831486-65831601 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 9-124
Cow position: chr6:67574513-67574628 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-127
Cow position: chr6:21004802-21004921 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 9-128
Cow position: chr6:5330538-5330655 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 9-129
Cow position: chr6:50771237-50771118 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 9-130
Cow position: chr6:57089329-57089447 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 9-131
Cow position: chr6:16700377-16700500 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 114, 0

Conread position: 9-131
Cow position: chr6:35985011-35984889 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 10-124
Cow position: chr6:16738739-16738853 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 10-131
Cow position: chr6:69374710-69374589 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 10-137
Cow position: chr6:55296968-55296841 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chr6:8369549-8369662 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chr6:17313861-17313976 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 11-124
Cow position: chr6:45159930-45159817 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 98
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chr6:50682174-50682061 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chr6:53138812-53138700 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 11-130
Cow position: chr6:18080389-18080272 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 11-131
Cow position: chr6:5445794-5445914 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 8

Conread position: 12-131
Cow position: chr6:19996742-19996862 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 111, 26

Conread position: 13-120
Cow position: chr6:36267126-36267234 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 93
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 13-131
Cow position: chr6:8187060-8186942 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 15-128
Cow position: chr6:24903446-24903334 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 16-124
Cow position: chr6:19936438-19936330 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 16-130
Cow position: chr6:26073095-26072980 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 101

Conread position: 20-127
Cow position: chr6:37827814-37827706 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 40-131
Cow position: chr6:31231136-31231045 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 79
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-118
Cow position: chr7:31900195-31900079 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 1-124
Cow position: chr7:18958421-18958300 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 3-114
Cow position: chr7:40308397-40308287 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 3-120
Cow position: chr7:31074454-31074338 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 3-121
Cow position: chr7:41122145-41122033 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 3-124
Cow position: chr7:44993720-44993840 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 3-127
Cow position: chr7:63983178-63983303 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 3-129
Cow position: chr7:18388277-18388150 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 93, 122

Conread position: 3-129
Cow position: chr7:53221718-53221590 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 3-131
Cow position: chr7:43457557-43457425 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 38, 125

Conread position: 3-131
Cow position: chr7:52591881-52591753 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-131
Cow position: chr7:64135345-64135221 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 110, 40

Conread position: 4-127
Cow position: chr7:51685137-51685258 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 4-131
Cow position: chr7:38361115-38360988 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 5-114
Cow position: chr7:35651606-35651496 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 5-118
Cow position: chr7:8387290-8387178 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 5-119
Cow position: chr7:43450665-43450778 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 5-120
Cow position: chr7:46051780-46051896 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 5-120
Cow position: chr7:54108748-54108632 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 5-121
Cow position: chr7:25464690-25464806 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr7:32549287-32549171 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr7:37697929-37698045 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr7:38347724-38347609 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 5-121
Cow position: chr7:49068717-49068601 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr7:58800292-58800407 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 5-121
Cow position: chr7:63300320-63300436 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr7:67873317-67873433 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-122
Cow position: chr7:10385003-10385119 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 5-122
Cow position: chr7:43347832-43347949 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr7:8523656-8523541 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 5-124
Cow position: chr7:9816121-9816240 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr7:11151347-11151229 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 5-124
Cow position: chr7:14496499-14496380 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr7:16285454-16285335 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr7:17000850-17000969 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr7:31885717-31885835 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 5-124
Cow position: chr7:40361775-40361893 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 5-124
Cow position: chr7:64384991-64384872 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-126
Cow position: chr7:19797805-19797684 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-127
Cow position: chr7:25263492-25263613 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 5-129
Cow position: chr7:39514357-39514480 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 5-129
Cow position: chr7:39516393-39516270 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 5-130
Cow position: chr7:12484423-12484548 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 5-130
Cow position: chr7:47047221-47047102 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 5-130
Cow position: chr7:54090607-54090732 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 111

Conread position: 5-131
Cow position: chr7:9128934-9128808 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 120, 33

Conread position: 5-131
Cow position: chr7:13067281-13067407 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr7:15653810-15653682 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 5-131
Cow position: chr7:23609501-23609628 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 5-131
Cow position: chr7:32791813-32791937 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 6-113
Cow position: chr7:32813568-32813675 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 92
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 6-121
Cow position: chr7:27290374-27290259 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-121
Cow position: chr7:58967392-58967507 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 7-122
Cow position: chr7:29682325-29682210 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-93
Cow position: chr7:54037992-54037908 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 75
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-120
Cow position: chr7:9744817-9744706 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-120
Cow position: chr7:12340586-12340697 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-121
Cow position: chr7:7461991-7461879 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-121
Cow position: chr7:9068470-9068358 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-121
Cow position: chr7:58615392-58615501 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 9-124
Cow position: chr7:40520483-40520369 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 9-128
Cow position: chr7:12342868-12342748 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 9-128
Cow position: chr7:30290817-30290699 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 9-129
Cow position: chr7:39093798-39093678 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-131
Cow position: chr7:10945475-10945596 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 113, 0

Conread position: 10-124
Cow position: chr7:8728657-8728543 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-124
Cow position: chr7:65988726-65988612 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-127
Cow position: chr7:22832370-22832487 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-128
Cow position: chr7:28109708-28109826 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 10-131
Cow position: chr7:53862636-53862754 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 10-138
Cow position: chr7:43085003-43085132 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 109
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 112, 0

Conread position: 10-138
Cow position: chr7:43109411-43109281 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 112, 0

Conread position: 11-121
Cow position: chr7:32093380-32093490 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chr7:32823927-32823814 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 11-131
Cow position: chr7:21174943-21175070 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 11-133
Cow position: chr7:41346903-41346782 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 113

Conread position: 12-130
Cow position: chr7:49942003-49941887 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 12-131
Cow position: chr7:13606584-13606705 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 12-131
Cow position: chr7:25195673-25195797 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 12-131
Cow position: chr7:39022079-39021960 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 13-124
Cow position: chr7:53834459-53834348 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 13-124
Cow position: chr7:68173028-68172917 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-130
Cow position: chr7:53579259-53579142 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 13-131
Cow position: chr7:7616906-7617025 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 14-117
Cow position: chr7:53270955-53271058 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 15-121
Cow position: chr7:23615822-23615716 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 16-121
Cow position: chr7:42335452-42335557 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-124
Cow position: chr8:39556219-39556340 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 3-117
Cow position: chr8:20327764-20327650 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chr8:36054253-36054372 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 3-121
Cow position: chr8:39352789-39352671 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-124
Cow position: chr8:18869972-18870093 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-129
Cow position: chr8:47057573-47057449 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 3-130
Cow position: chr8:39475622-39475755 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 3-131
Cow position: chr8:36771066-36771195 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 3-131
Cow position: chr8:37291999-37291870 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 4-121
Cow position: chr8:26008973-26009090 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-113
Cow position: chr8:20109375-20109483 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-114
Cow position: chr8:36912443-36912334 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-119
Cow position: chr8:38811395-38811505 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 5-119
Cow position: chr8:55095962-55096076 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-120
Cow position: chr8:3423097-3423211 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 5-120
Cow position: chr8:10832341-10832225 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 5-121
Cow position: chr8:3056933-3057049 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr8:12058815-12058930 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 5-121
Cow position: chr8:20112524-20112640 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 28, 99

Conread position: 5-121
Cow position: chr8:20897438-20897554 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr8:20926538-20926420 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 5-121
Cow position: chr8:24363546-24363431 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 5-121
Cow position: chr8:26625961-26626077 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr8:35817026-35816912 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 5-121
Cow position: chr8:52197366-52197250 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-122
Cow position: chr8:13454531-13454414 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 90

Conread position: 5-122
Cow position: chr8:39968189-39968074 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 5-124
Cow position: chr8:4992641-4992759 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 5-124
Cow position: chr8:5385592-5385473 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr8:10194157-10194276 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr8:20105781-20105662 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr8:22273953-22274072 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr8:26881735-26881618 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 5-124
Cow position: chr8:32243689-32243805 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 5-124
Cow position: chr8:32332381-32332262 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr8:37148403-37148522 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr8:53606428-53606309 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-127
Cow position: chr8:26305774-26305651 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 5-129
Cow position: chr8:54239658-54239778 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 5-130
Cow position: chr8:1651683-1651808 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr8:13925722-13925849 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 5-131
Cow position: chr8:16413721-16413596 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 107
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 93

Conread position: 5-131
Cow position: chr8:19378345-19378472 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 5-131
Cow position: chr8:19474990-19474864 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr8:37379507-37379632 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 118, 32

Conread position: 5-131
Cow position: chr8:47225906-47225780 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr8:55725676-55725549 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 119, 0

Conread position: 6-131
Cow position: chr8:11216761-11216642 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 9-112
Cow position: chr8:45352154-45352051 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-113
Cow position: chr8:20347491-20347385 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 9-118
Cow position: chr8:8097170-8097062 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 9-124
Cow position: chr8:50024868-50024754 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 9-124
Cow position: chr8:51511760-51511648 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 9-127
Cow position: chr8:25083271-25083389 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-131
Cow position: chr8:11203134-11203249 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 9-131
Cow position: chr8:16144227-16144348 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 114, 0

Conread position: 10-111
Cow position: chr8:1999727-1999828 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-114
Cow position: chr8:522330-522226 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-114
Cow position: chr8:25554731-25554627 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-121
Cow position: chr8:60200002-60199892 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 10-124
Cow position: chr8:27731135-27731249 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 10-124
Cow position: chr8:39329763-39329649 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 10

Conread position: 10-124
Cow position: chr8:50899106-50899220 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-129
Cow position: chr8:28322068-28322187 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-130
Cow position: chr8:38800256-38800377 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 10-131
Cow position: chr8:16216157-16216275 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 11-108
Cow position: chr8:20409785-20409882 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 11-117
Cow position: chr8:58901656-58901763 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 11-124
Cow position: chr8:13479087-13479197 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 11-124
Cow position: chr8:28382988-28382875 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chr8:37298576-37298687 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 11-131
Cow position: chr8:1024058-1024176 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 11-131
Cow position: chr8:24513048-24512928 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 12-131
Cow position: chr8:43052069-43052190 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 13-124
Cow position: chr8:8668086-8667976 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 15-129
Cow position: chr8:6910059-6909945 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 107, 56

Conread position: 15-129
Cow position: chr8:8767035-8766919 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 3-114
Cow position: chr9:26102683-26102573 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 3-121
Cow position: chr9:42062048-42061927 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 3-130
Cow position: chr9:26057481-26057605 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 120, 43

Conread position: 3-131
Cow position: chr9:48343946-48344074 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 4-120
Cow position: chr9:9723928-9724044 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 4-124
Cow position: chr9:52651541-52651661 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 4-130
Cow position: chr9:13743982-13744109 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 5-92
Cow position: chr9:35360342-35360429 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 76
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-119
Cow position: chr9:9091158-9091272 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-119
Cow position: chr9:50977306-50977420 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-120
Cow position: chr9:17785619-17785734 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr9:16216926-16216812 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 5-121
Cow position: chr9:20828853-20828738 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 5-121
Cow position: chr9:26477163-26477046 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 5-121
Cow position: chr9:31626081-31625965 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr9:38624677-38624790 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 5-124
Cow position: chr9:19657029-19657143 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 5-124
Cow position: chr9:35028218-35028336 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 5-124
Cow position: chr9:45170434-45170553 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 5-127
Cow position: chr9:8645213-8645092 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 104, 0

Conread position: 5-129
Cow position: chr9:27345637-27345763 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 48, 14

Conread position: 5-130
Cow position: chr9:31344660-31344785 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr9:12495164-12495038 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr9:28315376-28315248 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 5-131
Cow position: chr9:48017817-48017943 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr9:54598620-54598496 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 120, 92

Conread position: 5-131
Cow position: chr9:63169919-63169794 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 20

Conread position: 6-124
Cow position: chr9:34279109-34279228 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 6-130
Cow position: chr9:51566549-51566673 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 7-122
Cow position: chr9:60741238-60741350 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 9-113
Cow position: chr9:28342708-28342813 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 9-120
Cow position: chr9:8468002-8467894 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 9-121
Cow position: chr9:41644807-41644919 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 9-124
Cow position: chr9:12786530-12786645 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-124
Cow position: chr9:36457942-36457827 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 9-124
Cow position: chr9:61019419-61019534 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 9-128
Cow position: chr9:34423564-34423446 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 114, 0

Conread position: 10-95
Cow position: chr9:46930404-46930319 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 76
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-121
Cow position: chr9:2985013-2984902 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 10-121
Cow position: chr9:38370419-38370310 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 10-124
Cow position: chr9:58232379-58232493 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 10-129
Cow position: chr9:151811-151692 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-129
Cow position: chr9:28156645-28156526 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 10-130
Cow position: chr9:9582770-9582650 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-131
Cow position: chr9:44396604-44396483 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 11-111
Cow position: chr9:31513991-31514091 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 11-112
Cow position: chr9:26578261-26578365 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 11-122
Cow position: chr9:28866149-28866260 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chr9:6726991-6726878 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 102

Conread position: 11-124
Cow position: chr9:27279250-27279137 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 11-128
Cow position: chr9:6954309-6954426 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 11-130
Cow position: chr9:1403593-1403712 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 11-131
Cow position: chr9:17906601-17906718 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 11-131
Cow position: chr9:27495177-27495055 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 58

Conread position: 11-131
Cow position: chr9:39709798-39709677 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 12-124
Cow position: chr9:8613272-8613382 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 12-124
Cow position: chr9:52511059-52510946 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 12-127
Cow position: chr9:29091713-29091598 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 12-131
Cow position: chr9:34964795-34964910 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 12-131
Cow position: chr9:61286702-61286585 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 13-115
Cow position: chr9:53124028-53123926 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-129
Cow position: chr9:44758991-44759101 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 22-131
Cow position: chr9:35491365-35491255 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 1-119
Cow position: chrX:30962772-30962653 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 1-124
Cow position: chrX:4632750-4632627 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chrX:17498429-17498547 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chrX:24170623-24170501 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 3-121
Cow position: chrX:37867539-37867657 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-124
Cow position: chrX:36866279-36866400 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 103
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 3-126
Cow position: chrX:37717828-37717951 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 3-130
Cow position: chrX:1938121-1938246 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 3-130
Cow position: chrX:8642151-8642278 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 107
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 5-115
Cow position: chrX:44995608-44995718 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-119
Cow position: chrX:37955956-37956067 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 5-121
Cow position: chrX:1122438-1122323 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 5-121
Cow position: chrX:1960316-1960201 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 5-121
Cow position: chrX:1996343-1996227 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chrX:2314510-2314394 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chrX:10479858-10479974 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chrX:11670795-11670911 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chrX:12290828-12290942 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 5-121
Cow position: chrX:17231844-17231961 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 5-121
Cow position: chrX:19356572-19356688 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 101
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chrX:20339785-20339671 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 5-121
Cow position: chrX:26367594-26367478 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chrX:26881971-26881855 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chrX:27175107-27175224 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 5-121
Cow position: chrX:29478832-29478946 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 5-121
Cow position: chrX:35285282-35285398 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chrX:42247073-42246957 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 100
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chrX:46587931-46588044 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 5-124
Cow position: chrX:24331885-24332004 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chrX:40337019-40337138 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chrX:41790320-41790200 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 5-124
Cow position: chrX:41941732-41941850 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 5-124
Cow position: chrX:44040285-44040404 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-125
Cow position: chrX:11602376-11602259 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 5-127
Cow position: chrX:51792-51672 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 5-127
Cow position: chrX:42506840-42506716 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 5-128
Cow position: chrX:41435440-41435311 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 5-130
Cow position: chrX:40680723-40680848 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 5-130
Cow position: chrX:42159050-42159176 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 120, 0

Conread position: 5-131
Cow position: chrX:27261301-27261424 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 5-131
Cow position: chrX:28167088-28167213 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 5-131
Cow position: chrX:33678364-33678236 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 5-131
Cow position: chrX:34554832-34554960 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 118, 0

Conread position: 5-131
Cow position: chrX:39887105-39886978 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 5-131
Cow position: chrX:42836290-42836414 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 5-131
Cow position: chrX:48574248-48574121 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 120

Conread position: 5-146
Cow position: chrX:6559348-6559205 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 116, 0

Conread position: 6-121
Cow position: chrX:26979681-26979567 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 23, 90

Conread position: 9-121
Cow position: chrX:25815788-25815675 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 6

Conread position: 9-124
Cow position: chrX:37867366-37867481 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 9-124
Cow position: chrX:41194018-41194132 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 87, 5

Conread position: 9-127
Cow position: chrX:17524271-17524153 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-131
Cow position: chrX:27508913-27508789 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 9-131
Cow position: chrX:30958843-30958962 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 10-116
Cow position: chrX:29723865-29723970 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 10-124
Cow position: chrX:6855973-6856087 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 86, 98

Conread position: 10-124
Cow position: chrX:27442425-27442311 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-124
Cow position: chrX:33466738-33466849 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 99
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 59, 28

Conread position: 10-124
Cow position: chrX:34398670-34398556 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-124
Cow position: chrX:35409865-35409979 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 10-124
Cow position: chrX:44054916-44055030 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-131
Cow position: chrX:10415139-10415018 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 11-113
Cow position: chrX:28837000-28837100 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 11-119
Cow position: chrX:13347383-13347491 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 86
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 11-121
Cow position: chrX:1175875-1175766 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 11-121
Cow position: chrX:33654729-33654619 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chrX:597364-597251 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chrX:4109299-4109412 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 11-127
Cow position: chrX:25035267-25035150 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 11-130
Cow position: chrX:4092039-4092155 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 11-130
Cow position: chrX:22552864-22552747 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 11-130
Cow position: chrX:31489635-31489755 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 11-130
Cow position: chrX:34193966-34193847 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 11-131
Cow position: chrX:876732-876613 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 103
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 11-131
Cow position: chrX:9451458-9451575 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 57

Conread position: 11-131
Cow position: chrX:13923979-13924095 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 11-131
Cow position: chrX:16532621-16532743 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 93, 115

Conread position: 11-131
Cow position: chrX:31250503-31250624 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 11-145
Cow position: chrX:19162016-19161881 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 112, 0

Conread position: 12-124
Cow position: chrX:12095656-12095544 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 12-124
Cow position: chrX:42220586-42220474 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 12-124
Cow position: chrX:43150547-43150658 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 12-129
Cow position: chrX:23185222-23185105 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 12-133
Cow position: chrX:36283455-36283576 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 13-121
Cow position: chrX:8759739-8759847 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 13-122
Cow position: chrX:42449897-42449788 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 13-122
Cow position: chrX:44192327-44192217 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 13-124
Cow position: chrX:42760369-42760480 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 13-127
Cow position: chrX:23335859-23335745 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-131
Cow position: chrX:28106964-28107079 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 14-130
Cow position: chrX:18196116-18196233 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 14-130
Cow position: chrX:32590288-32590172 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 14-131
Cow position: chrX:20168674-20168789 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 9, 84

Conread position: 15-124
Cow position: chrX:13122062-13122171 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 36-138
Cow position: chrX:31334515-31334413 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0