Cow genome map

Conread name: Pig2-118P12

Conread position: 4-450
Cow position: chr1:61732082-61732526 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 7

Conread position: 7-553
Cow position: chr1:67903412-67902839 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 23

Conread position: 47-473
Cow position: chr1:23049685-23050132 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 295
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 49, 16

Conread position: 55-473
Cow position: chr1:31594008-31594447 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 295
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 35, 47

Conread position: 58-471
Cow position: chr1:54366696-54366285 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 266
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 36, 132

Conread position: 59-478
Cow position: chr1:102554883-102555303 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 287
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 28, 8

Conread position: 63-473
Cow position: chr1:76704292-76703859 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 293
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 40, 244

Conread position: 63-495
Cow position: chr1:42177311-42176858 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 299
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 112, 249

Conread position: 85-450
Cow position: chr1:72118996-72119386 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 218

Conread position: 93-449
Cow position: chr1:88533022-88532644 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 261
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 58, 38

Conread position: 123-473
Cow position: chr1:69059555-69059926 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 257
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 99, 181

Conread position: 242-472
Cow position: chr1:72134676-72134923 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 22, 0

Conread position: 323-471
Cow position: chr1:52323239-52323386 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 99, 0

Conread position: 323-495
Cow position: chr1:89478532-89478705 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 146, 167

Conread position: 1-449
Cow position: chr10:46190440-46190873 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 36

Conread position: 2-465
Cow position: chr10:15863233-15862767 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 317
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 228, 35

Conread position: 3-495
Cow position: chr10:24299817-24299316 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 35

Conread position: 3-544
Cow position: chr10:42682513-42683068 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 34

Conread position: 59-530
Cow position: chr10:3544451-3543972 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 248

Conread position: 140-544
Cow position: chr10:42663465-42663876 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 102

Conread position: 323-472
Cow position: chr10:60489021-60489169 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 376-502
Cow position: chr10:42627879-42628005 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 114

Conread position: 3-473
Cow position: chr11:7686580-7687044 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 34

Conread position: 50-336
Cow position: chr11:17910726-17910425 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 206
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 52, 224

Conread position: 50-449
Cow position: chr11:11124167-11124593 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 287
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 47, 146

Conread position: 63-470
Cow position: chr11:49076923-49076509 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 265
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 38

Conread position: 323-473
Cow position: chr11:7306536-7306380 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 117, 0

Conread position: 332-473
Cow position: chr11:81853582-81853440 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 6, 0

Conread position: 3-473
Cow position: chr12:48403730-48404211 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 37

Conread position: 63-490
Cow position: chr12:19867758-19868179 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 293
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 112, 8

Conread position: 376-473
Cow position: chr12:22121063-22121160 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 53-462
Cow position: chr13:5282627-5283062 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 209

Conread position: 102-324
Cow position: chr13:32165658-32165879 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 130, 38

Conread position: 137-544
Cow position: chr13:34768342-34767902 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 289
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 68, 162

Conread position: 339-473
Cow position: chr13:48356412-48356540 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 376-473
Cow position: chr13:34935977-34936074 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-542
Cow position: chr14:22018026-22018573 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 37

Conread position: 50-470
Cow position: chr14:49045511-49045942 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 280
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 173, 31

Conread position: 1-468
Cow position: chr15:36627984-36627520 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 36

Conread position: 3-478
Cow position: chr15:491544-491070 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 313
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 221, 40

Conread position: 3-486
Cow position: chr15:27065444-27064942 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 34

Conread position: 4-483
Cow position: chr15:21817130-21816644 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 33

Conread position: 49-459
Cow position: chr15:12613735-12614151 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 281
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 192, 11

Conread position: 62-470
Cow position: chr15:1236113-1236517 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 262
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 118, 31

Conread position: 68-467
Cow position: chr15:4631252-4630840 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 281
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 28, 7

Conread position: 198-442
Cow position: chr15:684513-684776 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 323-473
Cow position: chr15:51799426-51799576 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 360-473
Cow position: chr15:52635140-52635252 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 1-471
Cow position: chr16:5887712-5888207 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 34

Conread position: 1-530
Cow position: chr16:36233352-36232793 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 36

Conread position: 3-555
Cow position: chr16:49956237-49955665 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 34

Conread position: 50-431
Cow position: chr16:52816762-52816371 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 261
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 40, 67

Conread position: 53-314
Cow position: chr16:47780516-47780777 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 170, 142

Conread position: 64-305
Cow position: chr16:27715001-27714752 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 32, 81

Conread position: 95-473
Cow position: chr16:334352-334733 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 262
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 128, 95

Conread position: 149-416
Cow position: chr16:31717560-31717268 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 201
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 74, 155

Conread position: 323-468
Cow position: chr16:32934737-32934880 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 323-473
Cow position: chr16:44673597-44673746 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 376-471
Cow position: chr16:28234002-28233907 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-199
Cow position: chr17:4292927-4293118 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 24, 38

Conread position: 1-544
Cow position: chr17:20400535-20401094 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 34

Conread position: 3-473
Cow position: chr17:4080488-4080968 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 38

Conread position: 3-479
Cow position: chr17:31201241-31200741 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 31

Conread position: 4-284
Cow position: chr17:39932698-39932983 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 225, 33

Conread position: 7-496
Cow position: chr17:15416699-15417197 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 28

Conread position: 50-462
Cow position: chr17:153577-153142 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 7

Conread position: 3-474
Cow position: chr18:2887931-2887479 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 32

Conread position: 9-335
Cow position: chr18:43661172-43661496 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 28

Conread position: 44-166
Cow position: chr18:43199910-43200032 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 167-473
Cow position: chr18:42072897-42072568 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 221
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 56, 141

Conread position: 198-473
Cow position: chr18:43200026-43200324 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 36, 201

Conread position: 323-470
Cow position: chr18:45958081-45958226 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 121

Conread position: 3-468
Cow position: chr19:8230266-8229789 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 14

Conread position: 3-483
Cow position: chr19:6552446-6552954 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 334
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 99, 41

Conread position: 53-479
Cow position: chr19:36476489-36476904 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 181

Conread position: 64-473
Cow position: chr19:562591-562174 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 41

Conread position: 238-470
Cow position: chr19:15952578-15952808 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 27, 70

Conread position: 325-473
Cow position: chr19:32224031-32223883 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-427
Cow position: chr2:32435203-32434755 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 36

Conread position: 1-473
Cow position: chr2:32388056-32388537 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 34

Conread position: 11-489
Cow position: chr2:85069749-85069246 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 29

Conread position: 20-473
Cow position: chr2:54650277-54649816 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 17

Conread position: 53-473
Cow position: chr2:73190393-73190841 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 295
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 44, 28

Conread position: 76-468
Cow position: chr2:3729326-3729719 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 276
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 30, 56

Conread position: 146-473
Cow position: chr2:42334626-42334288 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 249
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 77, 52

Conread position: 323-471
Cow position: chr2:782903-782759 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 87, 65

Conread position: 323-483
Cow position: chr2:20904281-20904123 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 152, 11

Conread position: 376-472
Cow position: chr2:7900939-7901036 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 1-428
Cow position: chr20:9955260-9954809 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 36

Conread position: 50-321
Cow position: chr20:5574698-5574974 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 183
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 53, 30

Conread position: 318-473
Cow position: chr20:28593074-28593229 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 50-212
Cow position: chr21:44286628-44286788 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 67

Conread position: 56-545
Cow position: chr21:33754478-33755002 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 334
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 41, 245

Conread position: 60-473
Cow position: chr21:35088877-35089303 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 293
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 163, 38

Conread position: 140-473
Cow position: chr21:20745458-20745118 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 238
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 60, 26

Conread position: 327-471
Cow position: chr21:18820636-18820495 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 46, 23

Conread position: 49-221
Cow position: chr22:1624195-1624360 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 89

Conread position: 49-449
Cow position: chr22:7276514-7276938 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 288
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 104, 129

Conread position: 55-493
Cow position: chr22:308745-309198 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 290
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 168, 295

Conread position: 63-481
Cow position: chr22:36272514-36272955 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 241

Conread position: 51-473
Cow position: chr23:22880172-22879725 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 161

Conread position: 28-215
Cow position: chr24:35991798-35991609 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 9

Conread position: 59-486
Cow position: chr24:12289628-12289187 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 299
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 38, 110

Conread position: 323-484
Cow position: chr24:36707003-36707165 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 152, 0

Conread position: 17-160
Cow position: chr25:36239232-36239374 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 81, 20

Conread position: 25-453
Cow position: chr25:11934540-11934092 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 300
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 10

Conread position: 149-544
Cow position: chr25:36239386-36239803 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 286
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 79, 110

Conread position: 299-473
Cow position: chr25:18092326-18092494 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 50-449
Cow position: chr26:12664710-12665103 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 271
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 49, 87

Conread position: 50-473
Cow position: chr26:6601036-6601482 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 252

Conread position: 323-473
Cow position: chr26:9851293-9851143 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 122
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 323-473
Cow position: chr26:9854757-9854607 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 122
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 53-462
Cow position: chr27:26000039-25999622 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 278
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 44, 24

Conread position: 62-470
Cow position: chr27:3997367-3996945 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 270
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 79, 68

Conread position: 1-141
Cow position: chr28:25995495-25995634 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 96, 36

Conread position: 1-473
Cow position: chr28:26007039-26007518 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 36

Conread position: 17-273
Cow position: chr28:30564482-30564750 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 78, 22

Conread position: 63-483
Cow position: chr28:22827137-22827549 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 286
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 160, 209

Conread position: 117-451
Cow position: chr28:28875587-28875223 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 264
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 116, 327

Conread position: 323-495
Cow position: chr28:34648283-34648457 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 36, 60

Conread position: 323-555
Cow position: chr28:25785251-25785489 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 104, 88

Conread position: 1-523
Cow position: chr29:103567-104081 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 38

Conread position: 2-472
Cow position: chr29:45464822-45464329 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 39

Conread position: 28-230
Cow position: chr29:5184173-5184373 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 7

Conread position: 38-249
Cow position: chr29:27601664-27601868 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 56, 104

Conread position: 40-478
Cow position: chr29:34752660-34752222 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 182

Conread position: 133-472
Cow position: chr29:32639905-32640247 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 230
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 88, 216

Conread position: 323-473
Cow position: chr29:30810860-30811006 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 1-324
Cow position: chr3:2125029-2125350 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 36

Conread position: 17-473
Cow position: chr3:26948218-26948699 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 18

Conread position: 43-473
Cow position: chr3:34094477-34094027 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 291
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 44, 420

Conread position: 68-470
Cow position: chr3:32843484-32843066 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 295
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 27, 109

Conread position: 69-473
Cow position: chr3:36099771-36099346 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 288
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 27, 235

Conread position: 95-495
Cow position: chr3:14755529-14755107 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 292
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 127, 42

Conread position: 102-544
Cow position: chr3:14587316-14587780 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 325
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 122, 25

Conread position: 151-473
Cow position: chr3:15177342-15177684 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 226
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 68, 152

Conread position: 323-473
Cow position: chr3:64358954-64358804 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 323-480
Cow position: chr3:19692866-19692711 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 152, 123

Conread position: 323-545
Cow position: chr3:3979620-3979853 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 128, 0

Conread position: 332-479
Cow position: chr3:48329645-48329790 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 6, 19

Conread position: 332-495
Cow position: chr3:52865532-52865365 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 39, 13

Conread position: 376-470
Cow position: chr3:39325969-39326063 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 92-470
Cow position: chr4:21358464-21358839 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 154

Conread position: 281-533
Cow position: chr4:1464908-1464666 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 11

Conread position: 1-462
Cow position: chr5:27061291-27060819 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 34

Conread position: 1-483
Cow position: chr5:58746679-58747167 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 320
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 76, 36

Conread position: 3-186
Cow position: chr5:42751185-42751371 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 26, 37

Conread position: 43-473
Cow position: chr5:27000039-27000470 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 282
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 63, 123

Conread position: 71-473
Cow position: chr5:24150919-24151343 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 283
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 151, 113

Conread position: 131-473
Cow position: chr5:26090947-26090591 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 241
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 102, 172

Conread position: 287-470
Cow position: chr5:46631321-46631139 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 145

Conread position: 330-455
Cow position: chr5:6518981-6519104 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 330-473
Cow position: chr5:23688357-23688213 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 9-336
Cow position: chr6:10053551-10053868 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 237
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 85, 28

Conread position: 65-473
Cow position: chr6:37477210-37477641 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 296
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 29, 20

Conread position: 70-473
Cow position: chr6:7180653-7180251 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 271
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 79, 150

Conread position: 360-473
Cow position: chr6:10053937-10054048 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 1-473
Cow position: chr7:63961687-63961207 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 36

Conread position: 3-205
Cow position: chr7:17960246-17960450 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 39, 30

Conread position: 3-219
Cow position: chr7:49445362-49445578 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 32

Conread position: 7-544
Cow position: chr7:20429991-20429415 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 30

Conread position: 25-228
Cow position: chr7:60858324-60858121 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 68, 12

Conread position: 28-473
Cow position: chr7:47049468-47049926 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 9

Conread position: 49-470
Cow position: chr7:54886582-54887009 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 100

Conread position: 63-335
Cow position: chr7:1737480-1737211 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 186
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 170, 100

Conread position: 122-472
Cow position: chr7:22680877-22680507 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 257
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 101, 69

Conread position: 135-544
Cow position: chr7:64394684-64395099 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 10

Conread position: 236-470
Cow position: chr7:31864124-31864368 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 10, 68

Conread position: 376-518
Cow position: chr7:51013372-51013516 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 99, 132

Conread position: 3-402
Cow position: chr8:50752511-50752931 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 22

Conread position: 3-446
Cow position: chr8:42466597-42467057 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 34

Conread position: 3-473
Cow position: chr8:8905282-8904816 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 36

Conread position: 7-270
Cow position: chr8:25541771-25542043 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 28

Conread position: 113-473
Cow position: chr8:13734968-13735333 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 252
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 124, 200

Conread position: 259-544
Cow position: chr8:25542067-25542374 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 228
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 66, 10

Conread position: 323-480
Cow position: chr8:53426863-53427019 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 149, 0

Conread position: 338-459
Cow position: chr8:11590195-11590316 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 352-473
Cow position: chr8:38607961-38607842 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 93

Conread position: 376-473
Cow position: chr8:19229389-19229486 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-328
Cow position: chr9:11321915-11322250 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 36

Conread position: 3-473
Cow position: chr9:20310864-20310380 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 178

Conread position: 50-544
Cow position: chr9:6112030-6111505 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 335
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 143

Conread position: 54-463
Cow position: chr9:4983688-4984104 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 268
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 135, 197

Conread position: 67-470
Cow position: chr9:28002097-28002505 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 30

Conread position: 149-459
Cow position: chr9:64117856-64118190 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 234
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 17, 214

Conread position: 179-478
Cow position: chr9:23400667-23400988 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 227
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 45, 128

Conread position: 323-499
Cow position: chr9:240888-240710 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 118

Conread position: 332-473
Cow position: chr9:34107660-34107518 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 76

Conread position: 337-473
Cow position: chr9:13219566-13219701 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 351-532
Cow position: chr9:59424957-59425143 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 140, 123

Conread position: 1-321
Cow position: chrX:18531716-18532046 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 226
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 129, 36

Conread position: 1-473
Cow position: chrX:28548666-28549142 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 36

Conread position: 3-194
Cow position: chrX:11743371-11743562 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 93, 34

Conread position: 30-483
Cow position: chrX:17669613-17669152 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 7

Conread position: 52-333
Cow position: chrX:12975086-12974814 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 197
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 172, 65

Conread position: 54-471
Cow position: chrX:22131892-22131458 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 75

Conread position: 63-447
Cow position: chrX:30370161-30369759 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 281
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 30, 66

Conread position: 63-544
Cow position: chrX:2142126-2142648 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 350
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 27, 38

Conread position: 86-473
Cow position: chrX:13051535-13051927 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 276
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 18, 138

Conread position: 205-465
Cow position: chrX:20699451-20699168 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 10

Conread position: 367-473
Cow position: chrX:31372092-31372198 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0