Cow genome map
| Conread name: | Pig2-143K13 |
| Conread position: | 6-376 |
| Cow position: | chr1:37507150-37507518 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 256 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 144, 58 |
| Conread position: | 10-300 |
| Cow position: | chr1:63157197-63157488 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 141, 11 |
| Conread position: | 10-458 |
| Cow position: | chr1:85393068-85393492 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 306 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 60, 104 |
| Conread position: | 11-510 |
| Cow position: | chr1:558925-559423 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 103 |
| Conread position: | 11-510 |
| Cow position: | chr1:51985368-51984873 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 101 |
| Conread position: | 15-382 |
| Cow position: | chr1:96322449-96322812 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 135, 49 |
| Conread position: | 40-240 |
| Cow position: | chr1:62777065-62776860 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 109, 74 |
| Conread position: | 53-423 |
| Cow position: | chr1:7789482-7789847 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 96, 59 |
| Conread position: | 55-392 |
| Cow position: | chr1:71435819-71435480 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 57 |
| Conread position: | 10-510 |
| Cow position: | chr10:40707916-40707424 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 102 |
| Conread position: | 13-380 |
| Cow position: | chr10:28981680-28982042 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 246 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 101, 78 |
| Conread position: | 14-510 |
| Cow position: | chr10:30101209-30101689 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 342, 20 |
| Conread position: | 15-416 |
| Cow position: | chr10:25370415-25370006 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 96 |
| Conread position: | 16-458 |
| Cow position: | chr10:12158693-12159141 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 309 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 98, 191 |
| Conread position: | 16-510 |
| Cow position: | chr10:5639934-5640441 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 335 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 22, 216 |
| Conread position: | 21-510 |
| Cow position: | chr10:19718501-19718989 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 91 |
| Conread position: | 24-453 |
| Cow position: | chr10:49910205-49910632 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 91 |
| Conread position: | 31-390 |
| Cow position: | chr10:22529931-22530295 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 247 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 76, 214 |
| Conread position: | 54-280 |
| Cow position: | chr10:38331022-38330797 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 98, 59 |
| Conread position: | 3-460 |
| Cow position: | chr11:66307568-66308011 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 75 |
| Conread position: | 8-453 |
| Cow position: | chr11:9165354-9165795 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 112 |
| Conread position: | 10-441 |
| Cow position: | chr11:22637754-22638176 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 54 |
| Conread position: | 14-372 |
| Cow position: | chr11:2950078-2950439 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 96 |
| Conread position: | 15-322 |
| Cow position: | chr11:45931916-45931600 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 79, 100 |
| Conread position: | 15-390 |
| Cow position: | chr11:41604050-41604435 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 103 |
| Conread position: | 26-317 |
| Cow position: | chr11:53700689-53700992 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 78, 11 |
| Conread position: | 28-326 |
| Cow position: | chr11:73893540-73893855 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 80, 209 |
| Conread position: | 29-441 |
| Cow position: | chr11:22962520-22962129 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 284 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 136, 84 |
| Conread position: | 39-376 |
| Cow position: | chr11:45715189-45714856 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 50 |
| Conread position: | 53-498 |
| Cow position: | chr11:39474109-39473678 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 24 |
| Conread position: | 114-340 |
| Cow position: | chr11:78730197-78729973 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 75, 52 |
| Conread position: | 10-438 |
| Cow position: | chr12:40435099-40435519 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 102 |
| Conread position: | 12-450 |
| Cow position: | chr12:14812856-14812448 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 302 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 138, 102 |
| Conread position: | 14-443 |
| Cow position: | chr12:39799205-39799648 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 303 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 17-423 |
| Cow position: | chr12:40693467-40693893 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 94, 120 |
| Conread position: | 39-421 |
| Cow position: | chr12:29067509-29067135 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 75 |
| Conread position: | 114-457 |
| Cow position: | chr12:13957764-13957423 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 41, 136 |
| Conread position: | 119-362 |
| Cow position: | chr12:17120216-17119986 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 46, 70 |
| Conread position: | 11-322 |
| Cow position: | chr13:15805239-15804929 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 139, 101 |
| Conread position: | 13-410 |
| Cow position: | chr13:34385023-34385427 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 279 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 15, 100 |
| Conread position: | 13-509 |
| Cow position: | chr13:24108965-24109452 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 99 |
| Conread position: | 16-443 |
| Cow position: | chr13:40591790-40591356 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 98 |
| Conread position: | 16-510 |
| Cow position: | chr13:44279544-44280056 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 347 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 87, 184 |
| Conread position: | 30-415 |
| Cow position: | chr13:46222156-46221772 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 76 |
| Conread position: | 39-453 |
| Cow position: | chr13:4185161-4185573 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 87, 68 |
| Conread position: | 163-414 |
| Cow position: | chr13:48787354-48787117 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 15-414 |
| Cow position: | chr14:2293787-2293377 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 272 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 92, 49 |
| Conread position: | 2-505 |
| Cow position: | chr15:23103871-23103367 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 76 |
| Conread position: | 15-416 |
| Cow position: | chr15:49067908-49067508 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 260 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 89, 119 |
| Conread position: | 15-510 |
| Cow position: | chr15:16425044-16425527 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 345 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 99, 21 |
| Conread position: | 16-327 |
| Cow position: | chr15:10785460-10785159 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 226 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 136, 11 |
| Conread position: | 17-381 |
| Cow position: | chr15:18393558-18393915 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 255 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 145, 19 |
| Conread position: | 42-379 |
| Cow position: | chr15:39216184-39215856 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 70 |
| Conread position: | 2-352 |
| Cow position: | chr16:8176283-8176635 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 148, 110 |
| Conread position: | 10-457 |
| Cow position: | chr16:870774-871221 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 29 |
| Conread position: | 25-453 |
| Cow position: | chr16:11080813-11080369 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 185 |
| Conread position: | 36-299 |
| Cow position: | chr16:10965431-10965690 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 115, 27 |
| Conread position: | 53-510 |
| Cow position: | chr16:29322403-29322855 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 61 |
| Conread position: | 230-510 |
| Cow position: | chr16:21300817-21300535 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 57, 95 |
| Conread position: | 27-510 |
| Cow position: | chr17:11746883-11747350 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 339 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 10, 80 |
| Conread position: | 55-328 |
| Cow position: | chr17:1118969-1119230 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 97, 57 |
| Conread position: | 114-325 |
| Cow position: | chr17:29561582-29561375 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 36, 77 |
| Conread position: | 114-510 |
| Cow position: | chr17:26772176-26771776 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 273 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 38, 103 |
| Conread position: | 1-378 |
| Cow position: | chr18:39272409-39272033 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 260 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 44, 56 |
| Conread position: | 2-392 |
| Cow position: | chr18:6741343-6741743 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 113, 25 |
| Conread position: | 11-315 |
| Cow position: | chr18:52405407-52405097 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 145, 101 |
| Conread position: | 15-372 |
| Cow position: | chr18:23125367-23125720 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 92, 79 |
| Conread position: | 21-307 |
| Cow position: | chr18:45833578-45833866 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 93 |
| Conread position: | 36-510 |
| Cow position: | chr18:30783069-30783544 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 79 |
| Conread position: | 11-416 |
| Cow position: | chr19:29135218-29134810 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 103 |
| Conread position: | 12-406 |
| Cow position: | chr19:1302905-1303299 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 103 |
| Conread position: | 15-278 |
| Cow position: | chr19:30207467-30207204 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 100, 116 |
| Conread position: | 22-460 |
| Cow position: | chr19:7590631-7590200 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 109 |
| Conread position: | 29-280 |
| Cow position: | chr19:31376680-31376428 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 40-450 |
| Cow position: | chr19:17823250-17823647 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 74 |
| Conread position: | 10-449 |
| Cow position: | chr2:61680286-61679851 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 104 |
| Conread position: | 14-424 |
| Cow position: | chr2:43810765-43810360 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 20 |
| Conread position: | 27-413 |
| Cow position: | chr2:50473-50866 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 10 |
| Conread position: | 28-508 |
| Cow position: | chr2:9373741-9373272 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 7 |
| Conread position: | 114-370 |
| Cow position: | chr2:85742615-85742354 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 51, 135 |
| Conread position: | 332-510 |
| Cow position: | chr2:44056260-44056438 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 123, 23 |
| Conread position: | 3-479 |
| Cow position: | chr20:34938634-34939123 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 116 |
| Conread position: | 16-423 |
| Cow position: | chr20:15848966-15848567 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 278 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 133, 13 |
| Conread position: | 9-450 |
| Cow position: | chr21:876605-876158 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 25 |
| Conread position: | 18-312 |
| Cow position: | chr21:46884181-46883896 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 84, 201 |
| Conread position: | 29-388 |
| Cow position: | chr21:37646403-37646764 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 259 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 15, 25 |
| Conread position: | 60-510 |
| Cow position: | chr21:12507534-12507088 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 55 |
| Conread position: | 14-296 |
| Cow position: | chr22:41656684-41656401 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 136, 100 |
| Conread position: | 292-510 |
| Cow position: | chr22:2442916-2442697 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 89, 46 |
| Conread position: | 13-443 |
| Cow position: | chr23:11757121-11756699 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 296 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 105, 189 |
| Conread position: | 14-322 |
| Cow position: | chr23:8257567-8257272 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 140, 97 |
| Conread position: | 39-454 |
| Cow position: | chr23:6471227-6471648 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 87 |
| Conread position: | 114-424 |
| Cow position: | chr23:22639318-22639623 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 237 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 36, 93 |
| Conread position: | 239-475 |
| Cow position: | chr23:13515059-13514832 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 91, 42 |
| Conread position: | 37-510 |
| Cow position: | chr24:37230458-37229982 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 75 |
| Conread position: | 10-409 |
| Cow position: | chr25:8347852-8348246 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 86 |
| Conread position: | 24-359 |
| Cow position: | chr25:16693567-16693909 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 12, 32 |
| Conread position: | 27-359 |
| Cow position: | chr25:24801322-24800993 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 239 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 14, 87 |
| Conread position: | 102-418 |
| Cow position: | chr25:14155636-14155318 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 51, 10 |
| Conread position: | 114-388 |
| Cow position: | chr25:12449162-12449439 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 77 |
| Conread position: | 1-393 |
| Cow position: | chr26:26628623-26629025 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 274 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 149, 113 |
| Conread position: | 39-510 |
| Cow position: | chr26:30981513-30981980 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 72 |
| Conread position: | 10-451 |
| Cow position: | chr27:22118909-22119342 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 11 |
| Conread position: | 6-509 |
| Cow position: | chr28:9126058-9126571 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 47 |
| Conread position: | 11-442 |
| Cow position: | chr28:29122996-29123419 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 53 |
| Conread position: | 13-387 |
| Cow position: | chr28:21540648-21540274 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 155, 54 |
| Conread position: | 13-465 |
| Cow position: | chr28:11874137-11873719 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 313 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 20, 85 |
| Conread position: | 14-356 |
| Cow position: | chr28:4186467-4186118 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 90, 129 |
| Conread position: | 15-509 |
| Cow position: | chr28:20772821-20772346 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 97 |
| Conread position: | 15-510 |
| Cow position: | chr28:20673840-20673343 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 323 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 82, 118 |
| Conread position: | 24-510 |
| Cow position: | chr28:26595849-26595372 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 43 |
| Conread position: | 34-460 |
| Cow position: | chr28:5433650-5434065 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 5 |
| Conread position: | 53-460 |
| Cow position: | chr28:26620999-26621414 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 58 |
| Conread position: | 6-510 |
| Cow position: | chr29:18527618-18528121 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 338 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 48, 15 |
| Conread position: | 7-443 |
| Cow position: | chr3:72797916-72798356 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 305 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 102, 96 |
| Conread position: | 8-510 |
| Cow position: | chr3:54040048-54039541 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 28 |
| Conread position: | 14-449 |
| Cow position: | chr3:73731993-73732426 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 100 |
| Conread position: | 15-385 |
| Cow position: | chr3:14747026-14747421 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 280 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 31, 39 |
| Conread position: | 15-453 |
| Cow position: | chr3:22945759-22946206 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 302 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 99, 21 |
| Conread position: | 31-510 |
| Cow position: | chr3:68653631-68653148 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 321 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 102, 71 |
| Conread position: | 32-453 |
| Cow position: | chr3:38017637-38018052 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 5 |
| Conread position: | 53-509 |
| Cow position: | chr3:69510331-69510787 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 59 |
| Conread position: | 55-234 |
| Cow position: | chr3:49712620-49712802 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 95, 57 |
| Conread position: | 5-460 |
| Cow position: | chr4:10996037-10996483 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 73 |
| Conread position: | 10-453 |
| Cow position: | chr4:54184382-54184822 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 97 |
| Conread position: | 13-419 |
| Cow position: | chr4:36027665-36028079 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 8 |
| Conread position: | 14-234 |
| Cow position: | chr4:20344868-20345086 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 138, 22 |
| Conread position: | 14-311 |
| Cow position: | chr4:65524956-65525264 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 64, 106 |
| Conread position: | 14-510 |
| Cow position: | chr4:37040930-37041434 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 105 |
| Conread position: | 16-328 |
| Cow position: | chr4:56495662-56495967 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 81, 169 |
| Conread position: | 39-357 |
| Cow position: | chr4:36542270-36542583 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 111, 58 |
| Conread position: | 168-510 |
| Cow position: | chr4:27167263-27166930 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 12 |
| Conread position: | 4-453 |
| Cow position: | chr5:2710497-2710947 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 17 |
| Conread position: | 12-415 |
| Cow position: | chr5:4812032-4812430 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 288 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 32, 112 |
| Conread position: | 14-436 |
| Cow position: | chr5:15618204-15617790 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 291 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 154, 22 |
| Conread position: | 27-371 |
| Cow position: | chr5:20899274-20898939 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 123, 10 |
| Conread position: | 5-460 |
| Cow position: | chr6:41216553-41216100 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 103 |
| Conread position: | 11-452 |
| Cow position: | chr6:52010484-52010039 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 300 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 103, 233 |
| Conread position: | 14-278 |
| Cow position: | chr6:47343504-47343240 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 139, 59 |
| Conread position: | 14-388 |
| Cow position: | chr6:35240969-35241337 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 256 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 147, 100 |
| Conread position: | 16-510 |
| Cow position: | chr6:4825096-4824618 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 91 |
| Conread position: | 40-460 |
| Cow position: | chr6:55572975-55573402 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 71 |
| Conread position: | 9-328 |
| Cow position: | chr7:38219003-38218678 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 51, 81 |
| Conread position: | 15-453 |
| Cow position: | chr7:21565213-21564785 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 301 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 99, 21 |
| Conread position: | 27-284 |
| Cow position: | chr7:47110890-47110631 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 123, 9 |
| Conread position: | 28-390 |
| Cow position: | chr7:51472673-51473032 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 98 |
| Conread position: | 118-325 |
| Cow position: | chr7:1764939-1764728 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 50, 123 |
| Conread position: | 10-382 |
| Cow position: | chr8:29291843-29292218 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 102 |
| Conread position: | 11-231 |
| Cow position: | chr8:21187281-21187504 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 139, 71 |
| Conread position: | 11-370 |
| Cow position: | chr8:48615621-48615981 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 246 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 60, 108 |
| Conread position: | 11-392 |
| Cow position: | chr8:5950620-5951015 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 33, 44 |
| Conread position: | 13-388 |
| Cow position: | chr8:22283283-22282889 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 109 |
| Conread position: | 15-323 |
| Cow position: | chr8:40157010-40157325 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 99, 67 |
| Conread position: | 24-388 |
| Cow position: | chr8:40573936-40574307 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 262 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 126, 88 |
| Conread position: | 66-388 |
| Cow position: | chr8:55980166-55980492 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 46 |
| Conread position: | 250-510 |
| Cow position: | chr8:41743524-41743265 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 205, 30 |
| Conread position: | 5-278 |
| Cow position: | chr9:17817641-17817371 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 145, 73 |
| Conread position: | 14-362 |
| Cow position: | chr9:19709719-19710072 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 254 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 60, 103 |
| Conread position: | 14-456 |
| Cow position: | chr9:47900778-47901227 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 296 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 100, 7 |
| Conread position: | 15-460 |
| Cow position: | chr9:47324686-47324245 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 309 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 136, 97 |
| Conread position: | 26-460 |
| Cow position: | chr9:5864788-5864369 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 304 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 18, 11 |
| Conread position: | 27-359 |
| Cow position: | chr9:22837499-22837833 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 123, 84 |
| Conread position: | 15-510 |
| Cow position: | chrX:2462582-2463056 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 349 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 10, 99 |
| Conread position: | 22-509 |
| Cow position: | chrX:27240865-27240375 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 15 |
| Conread position: | 27-373 |
| Cow position: | chrX:20543779-20544126 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 9 |
| Conread position: | 27-454 |
| Cow position: | chrX:25924403-25924840 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 85 |
| Conread position: | 116-488 |
| Cow position: | chrX:5909460-5909837 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 112 |