Cow genome map
| Conread name: | Pig2-14A06 |
| Conread position: | 2-259 |
| Cow position: | chr1:40065038-40064776 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 33, 190 |
| Conread position: | 2-411 |
| Cow position: | chr1:99218768-99219205 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 170 |
| Conread position: | 2-415 |
| Cow position: | chr1:24653040-24652597 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 293 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 47, 239 |
| Conread position: | 3-426 |
| Cow position: | chr1:82071492-82071047 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 144 |
| Conread position: | 69-287 |
| Cow position: | chr1:87849365-87849150 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 74, 19 |
| Conread position: | 75-380 |
| Cow position: | chr1:83975965-83975653 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 202, 68 |
| Conread position: | 75-396 |
| Cow position: | chr1:84224016-84223693 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 68, 81 |
| Conread position: | 75-416 |
| Cow position: | chr1:42342841-42343184 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 187, 105 |
| Conread position: | 3-424 |
| Cow position: | chr10:44081923-44081502 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 141, 30 |
| Conread position: | 5-416 |
| Cow position: | chr10:51845490-51845086 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 288 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 56, 80 |
| Conread position: | 69-416 |
| Cow position: | chr10:23138969-23138620 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 22, 154 |
| Conread position: | 71-426 |
| Cow position: | chr10:10719506-10719868 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 251 |
| Conread position: | 2-416 |
| Cow position: | chr11:60032800-60033229 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 38, 191 |
| Conread position: | 41-426 |
| Cow position: | chr11:44049901-44049514 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 104, 34 |
| Conread position: | 63-410 |
| Cow position: | chr11:81321641-81321991 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 72 |
| Conread position: | 10-426 |
| Cow position: | chr12:26042861-26042424 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 293 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 46, 152 |
| Conread position: | 69-411 |
| Cow position: | chr12:29294218-29294561 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 22, 64 |
| Conread position: | 2-273 |
| Cow position: | chr13:46527948-46527669 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 65, 27 |
| Conread position: | 5-255 |
| Cow position: | chr13:43980757-43981010 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 64, 112 |
| Conread position: | 6-410 |
| Cow position: | chr13:34377378-34377778 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 69, 226 |
| Conread position: | 85-396 |
| Cow position: | chr13:30118849-30119160 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 57, 220 |
| Conread position: | 98-425 |
| Cow position: | chr13:43759197-43758857 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 45, 32 |
| Conread position: | 2-408 |
| Cow position: | chr14:19056193-19056615 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 282 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 70, 117 |
| Conread position: | 3-263 |
| Cow position: | chr14:35371844-35372108 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 16 |
| Conread position: | 64-413 |
| Cow position: | chr14:26090595-26090243 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 237 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 15, 6 |
| Conread position: | 88-424 |
| Cow position: | chr14:33689467-33689124 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 55, 15 |
| Conread position: | 2-416 |
| Cow position: | chr15:38637253-38636840 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 190 |
| Conread position: | 2-424 |
| Cow position: | chr15:16345634-16346049 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 270 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 31, 84 |
| Conread position: | 4-416 |
| Cow position: | chr15:41957183-41956768 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 81, 186 |
| Conread position: | 69-415 |
| Cow position: | chr15:15782376-15782027 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 240 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 24, 63 |
| Conread position: | 103-337 |
| Cow position: | chr15:29333538-29333778 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 48, 154 |
| Conread position: | 2-218 |
| Cow position: | chr16:40654933-40654704 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 2-353 |
| Cow position: | chr16:4771863-4771488 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 76, 16 |
| Conread position: | 3-257 |
| Cow position: | chr16:26823864-26823601 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 27, 15 |
| Conread position: | 3-413 |
| Cow position: | chr16:43649137-43648705 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 37, 100 |
| Conread position: | 18-260 |
| Cow position: | chr16:32931117-32930879 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 76, 63 |
| Conread position: | 22-413 |
| Cow position: | chr16:32773548-32773950 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 30, 292 |
| Conread position: | 69-416 |
| Cow position: | chr16:35160321-35159961 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 22, 77 |
| Conread position: | 71-416 |
| Cow position: | chr16:13410886-13410524 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 78, 250 |
| Conread position: | 98-383 |
| Cow position: | chr16:27512006-27512294 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 199 |
| Conread position: | 99-424 |
| Cow position: | chr16:51590550-51590879 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 57 |
| Conread position: | 2-407 |
| Cow position: | chr17:32689071-32688639 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 291 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 56, 121 |
| Conread position: | 3-416 |
| Cow position: | chr17:4168766-4168338 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 68, 24 |
| Conread position: | 5-249 |
| Cow position: | chr17:1079625-1079380 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 89, 69 |
| Conread position: | 69-362 |
| Cow position: | chr17:6913191-6913481 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 28, 75 |
| Conread position: | 69-416 |
| Cow position: | chr17:1538219-1538575 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 246 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 22, 96 |
| Conread position: | 2-269 |
| Cow position: | chr18:19162837-19162575 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 139, 70 |
| Conread position: | 2-364 |
| Cow position: | chr18:17961932-17962313 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 46, 233 |
| Conread position: | 9-416 |
| Cow position: | chr18:42071043-42071444 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 79, 57 |
| Conread position: | 49-412 |
| Cow position: | chr18:35742897-35743281 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 247 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 22, 294 |
| Conread position: | 55-415 |
| Cow position: | chr18:37559287-37558920 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 15, 73 |
| Conread position: | 69-413 |
| Cow position: | chr18:13357900-13357547 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 20, 143 |
| Conread position: | 69-416 |
| Cow position: | chr18:20692435-20692807 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 11, 272 |
| Conread position: | 73-416 |
| Cow position: | chr18:24574244-24574576 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 227 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 213, 68 |
| Conread position: | 2-269 |
| Cow position: | chr19:42347745-42347470 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 67, 157 |
| Conread position: | 3-387 |
| Cow position: | chr19:12700614-12700210 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 271 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 69, 24 |
| Conread position: | 5-426 |
| Cow position: | chr19:2964956-2964507 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 294 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 39, 178 |
| Conread position: | 64-416 |
| Cow position: | chr19:44374676-44374308 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 135 |
| Conread position: | 98-416 |
| Cow position: | chr19:14211520-14211840 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 47, 32 |
| Conread position: | 1-257 |
| Cow position: | chr2:63519231-63518966 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 261 |
| Conread position: | 4-416 |
| Cow position: | chr2:43677108-43676680 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 180 |
| Conread position: | 9-416 |
| Cow position: | chr2:43055115-43054689 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 61, 220 |
| Conread position: | 71-362 |
| Cow position: | chr2:84613131-84613424 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 188, 68 |
| Conread position: | 71-416 |
| Cow position: | chr2:74112630-74112965 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 85-417 |
| Cow position: | chr2:2874713-2875039 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 217, 112 |
| Conread position: | 1-413 |
| Cow position: | chr20:5373853-5374265 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 279 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 147, 77 |
| Conread position: | 2-260 |
| Cow position: | chr20:5195310-5195581 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 49, 31 |
| Conread position: | 2-413 |
| Cow position: | chr20:24615127-24615557 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 47, 212 |
| Conread position: | 2-416 |
| Cow position: | chr20:943421-943864 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 22, 223 |
| Conread position: | 18-426 |
| Cow position: | chr20:32922408-32922820 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 16 |
| Conread position: | 65-416 |
| Cow position: | chr20:21152374-21152020 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 241 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 84, 18 |
| Conread position: | 1-420 |
| Cow position: | chr21:13185508-13185072 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 280 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 57, 220 |
| Conread position: | 2-257 |
| Cow position: | chr21:28482166-28481916 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 85, 70 |
| Conread position: | 2-354 |
| Cow position: | chr21:31421565-31421920 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 92, 16 |
| Conread position: | 2-416 |
| Cow position: | chr21:35582315-35581893 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 38, 140 |
| Conread position: | 3-410 |
| Cow position: | chr21:405268-405701 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 282 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 69, 34 |
| Conread position: | 11-253 |
| Cow position: | chr21:28261906-28261651 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 51, 88 |
| Conread position: | 69-416 |
| Cow position: | chr21:1075876-1075508 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 22, 270 |
| Conread position: | 71-416 |
| Cow position: | chr21:20742825-20743171 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 18, 129 |
| Conread position: | 2-413 |
| Cow position: | chr22:31506430-31506866 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 285 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 25, 180 |
| Conread position: | 88-407 |
| Cow position: | chr22:16439049-16438717 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 161, 74 |
| Conread position: | 2-426 |
| Cow position: | chr23:12547905-12547467 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 307 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 49, 185 |
| Conread position: | 2-195 |
| Cow position: | chr24:1493367-1493163 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 49, 38 |
| Conread position: | 2-198 |
| Cow position: | chr24:36860671-36860474 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 49 |
| Conread position: | 2-391 |
| Cow position: | chr24:28031617-28032011 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 70, 16 |
| Conread position: | 71-364 |
| Cow position: | chr24:5776676-5776981 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 89, 118 |
| Conread position: | 71-416 |
| Cow position: | chr24:39491905-39492273 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 239 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 88, 135 |
| Conread position: | 2-420 |
| Cow position: | chr25:26732735-26732300 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 273 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 60, 95 |
| Conread position: | 9-414 |
| Cow position: | chr25:30148962-30149389 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 28 |
| Conread position: | 30-424 |
| Cow position: | chr25:33049143-33049545 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 114, 10 |
| Conread position: | 69-420 |
| Cow position: | chr25:23847536-23847879 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 236 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 80, 28 |
| Conread position: | 2-191 |
| Cow position: | chr26:32992400-32992597 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 78, 47 |
| Conread position: | 71-425 |
| Cow position: | chr26:16856402-16856779 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 21, 137 |
| Conread position: | 2-174 |
| Cow position: | chr27:24274151-24274330 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 2-422 |
| Cow position: | chr27:14661410-14660966 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 292 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 71, 9 |
| Conread position: | 3-376 |
| Cow position: | chr27:1760868-1760479 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 256 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 69, 139 |
| Conread position: | 6-193 |
| Cow position: | chr27:23447238-23447434 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 65, 82 |
| Conread position: | 68-417 |
| Cow position: | chr27:2622542-2622181 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 158 |
| Conread position: | 69-397 |
| Cow position: | chr27:16966888-16967228 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 24, 119 |
| Conread position: | 69-414 |
| Cow position: | chr27:16611325-16611689 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 161, 193 |
| Conread position: | 2-381 |
| Cow position: | chr28:29338258-29337857 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 264 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 60, 173 |
| Conread position: | 29-416 |
| Cow position: | chr28:20896075-20896496 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 38, 160 |
| Conread position: | 33-257 |
| Cow position: | chr28:29569401-29569180 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 110, 17 |
| Conread position: | 73-420 |
| Cow position: | chr28:33959118-33959463 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 225 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 15, 153 |
| Conread position: | 85-421 |
| Cow position: | chr28:22304084-22303759 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 60, 31 |
| Conread position: | 98-417 |
| Cow position: | chr28:4845990-4846314 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 86 |
| Conread position: | 70-337 |
| Cow position: | chr29:37165737-37165461 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 121 |
| Conread position: | 71-413 |
| Cow position: | chr29:24335356-24335712 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 72, 11 |
| Conread position: | 74-420 |
| Cow position: | chr29:26460612-26460958 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 29 |
| Conread position: | 2-203 |
| Cow position: | chr3:77463547-77463341 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 68, 27 |
| Conread position: | 2-410 |
| Cow position: | chr3:33706289-33706707 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 278 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 50, 92 |
| Conread position: | 2-415 |
| Cow position: | chr3:27980526-27980085 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 67, 204 |
| Conread position: | 2-416 |
| Cow position: | chr3:43032530-43032126 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 275 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 71, 33 |
| Conread position: | 8-416 |
| Cow position: | chr3:30001963-30001551 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 270 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 68, 52 |
| Conread position: | 13-260 |
| Cow position: | chr3:57538149-57537888 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 68-364 |
| Cow position: | chr3:45982858-45983158 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 26, 80 |
| Conread position: | 77-408 |
| Cow position: | chr3:72163423-72163765 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 187, 100 |
| Conread position: | 78-332 |
| Cow position: | chr3:84422304-84422554 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 213, 101 |
| Conread position: | 82-375 |
| Cow position: | chr3:80433574-80433863 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 133, 13 |
| Conread position: | 96-362 |
| Cow position: | chr3:62317482-62317747 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 49, 36 |
| Conread position: | 2-414 |
| Cow position: | chr4:20549939-20549509 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 279 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 70, 149 |
| Conread position: | 9-386 |
| Cow position: | chr4:50847457-50847861 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 264 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 60, 31 |
| Conread position: | 45-365 |
| Cow position: | chr4:18475565-18475900 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 116, 24 |
| Conread position: | 54-335 |
| Cow position: | chr4:34359187-34358893 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 16, 107 |
| Conread position: | 71-416 |
| Cow position: | chr4:6614753-6615117 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 116, 109 |
| Conread position: | 1-426 |
| Cow position: | chr5:34953406-34952978 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 288 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 77, 52 |
| Conread position: | 3-362 |
| Cow position: | chr5:21777485-21777857 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 252 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 39, 95 |
| Conread position: | 3-416 |
| Cow position: | chr5:18886999-18887427 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 278 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 67, 233 |
| Conread position: | 3-426 |
| Cow position: | chr5:73974345-73974799 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 309 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 10, 190 |
| Conread position: | 4-410 |
| Cow position: | chr5:74474723-74474289 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 277 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 67, 23 |
| Conread position: | 60-253 |
| Cow position: | chr5:27180607-27180410 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 2-410 |
| Cow position: | chr6:60374892-60375320 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 275 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 76, 25 |
| Conread position: | 2-424 |
| Cow position: | chr6:58004913-58004475 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 283 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 140, 72 |
| Conread position: | 3-416 |
| Cow position: | chr6:10680104-10679681 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 265 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 64, 303 |
| Conread position: | 5-204 |
| Cow position: | chr6:8513492-8513701 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 19-249 |
| Cow position: | chr6:43642406-43642655 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 38, 133 |
| Conread position: | 75-416 |
| Cow position: | chr6:13862930-13863298 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 71-390 |
| Cow position: | chr7:34221145-34221468 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 71, 171 |
| Conread position: | 71-426 |
| Cow position: | chr7:57084628-57084255 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 80, 49 |
| Conread position: | 85-426 |
| Cow position: | chr7:42501216-42500876 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 242, 52 |
| Conread position: | 1-426 |
| Cow position: | chr8:45178772-45178337 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 287 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 67, 123 |
| Conread position: | 2-336 |
| Cow position: | chr8:41248137-41247782 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 245 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 68, 16 |
| Conread position: | 2-361 |
| Cow position: | chr8:4293100-4292724 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 39, 200 |
| Conread position: | 2-416 |
| Cow position: | chr8:36533331-36533778 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 38, 189 |
| Conread position: | 69-257 |
| Cow position: | chr8:46113769-46113960 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 25, 99 |
| Conread position: | 69-361 |
| Cow position: | chr8:47629958-47629655 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 119, 18 |
| Conread position: | 71-396 |
| Cow position: | chr8:56884416-56884073 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 20, 231 |
| Conread position: | 2-416 |
| Cow position: | chr9:34725126-34724685 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 70, 269 |
| Conread position: | 2-423 |
| Cow position: | chr9:13118685-13119125 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 292 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 67, 38 |
| Conread position: | 3-211 |
| Cow position: | chr9:51777234-51777018 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 64, 29 |
| Conread position: | 3-413 |
| Cow position: | chr9:14040540-14040950 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 63, 214 |
| Conread position: | 66-413 |
| Cow position: | chr9:28696965-28696620 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 89 |
| Conread position: | 72-416 |
| Cow position: | chr9:46460528-46460880 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 17, 124 |
| Conread position: | 77-425 |
| Cow position: | chr9:10548183-10547822 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 264 |
| Conread position: | 2-418 |
| Cow position: | chrX:24168525-24168961 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 288 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 77, 199 |
| Conread position: | 2-421 |
| Cow position: | chrX:40021146-40021566 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 285 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 23, 61 |
| Conread position: | 3-416 |
| Cow position: | chrX:24230130-24230546 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 81, 53 |
| Conread position: | 22-420 |
| Cow position: | chrX:38236081-38236494 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 56 |
| Conread position: | 41-335 |
| Cow position: | chrX:40850028-40849723 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 101, 36 |
| Conread position: | 42-383 |
| Cow position: | chrX:25613524-25613174 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 27 |
| Conread position: | 55-269 |
| Cow position: | chrX:18841532-18841753 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 15, 209 |
| Conread position: | 69-316 |
| Cow position: | chrX:34448970-34448714 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 13, 96 |
| Conread position: | 69-414 |
| Cow position: | chrX:17666347-17666710 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 78 |
| Conread position: | 71-405 |
| Cow position: | chrX:17525279-17525627 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 71, 92 |