Cow genome map

Conread name: Pig2-35I22

Conread position: 2-344
Cow position: chr10:15742251-15742595 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 221
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 110, 269

Conread position: 15-335
Cow position: chr11:75197921-75197599 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 198
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 94, 152

Conread position: 20-346
Cow position: chr11:74322617-74322945 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 208
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 99, 150

Conread position: 39-347
Cow position: chr11:74294590-74294280 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 206
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 85, 0

Conread position: 39-347
Cow position: chr11:74315410-74315100 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 193
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 48-380
Cow position: chr11:75219851-75219517 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 213
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 46, 131

Conread position: 48-380
Cow position: chr11:75235412-75235078 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 212
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 46, 131

Conread position: 48-380
Cow position: chr11:75247284-75246950 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 211
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 131

Conread position: 2-335
Cow position: chr15:50175781-50176116 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 212
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 105, 97

Conread position: 16-381
Cow position: chr15:52710549-52710182 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 225
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 104, 254

Conread position: 17-326
Cow position: chr15:50131118-50131429 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 203
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 84, 170

Conread position: 38-264
Cow position: chr15:50109285-50109057 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 149
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 39-340
Cow position: chr15:50067172-50066869 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 196
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 72, 152

Conread position: 48-338
Cow position: chr15:50134648-50134356 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 189
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 66, 148

Conread position: 6-381
Cow position: chr17:2463448-2463075 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 241
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 145, 86

Conread position: 18-347
Cow position: chr17:2482955-2482625 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 210
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 53, 150

Conread position: 33-344
Cow position: chr18:30658028-30657715 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 198
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 86, 237

Conread position: 13-346
Cow position: chr19:18455999-18456334 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 217
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 86, 178

Conread position: 14-338
Cow position: chr19:18481279-18481605 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 201
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 90

Conread position: 14-346
Cow position: chr19:18445687-18446021 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 219
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 75, 142

Conread position: 14-346
Cow position: chr19:18678741-18679074 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 219
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 102, 111

Conread position: 14-346
Cow position: chr19:18693811-18694145 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 220
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 85, 143

Conread position: 38-367
Cow position: chr19:20837413-20837744 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 210
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 120

Conread position: 9-381
Cow position: chr2:620273-620636 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 237
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 112, 106

Conread position: 17-347
Cow position: chr2:593362-593031 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 211
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 97, 75

Conread position: 38-380
Cow position: chr2:86493415-86493759 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 228
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 51, 66

Conread position: 5-344
Cow position: chr24:1832839-1832498 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 223
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 115, 151

Conread position: 5-381
Cow position: chr24:1815609-1815231 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 233
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 115, 141

Conread position: 16-353
Cow position: chr24:33193496-33193158 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 217
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 104, 332

Conread position: 17-340
Cow position: chr24:1944273-1944598 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 200
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 94, 174

Conread position: 17-381
Cow position: chr24:1856923-1856558 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 224
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 107, 28

Conread position: 33-344
Cow position: chr24:1823726-1823413 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 194
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 15-340
Cow position: chr25:23329522-23329849 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 202
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 96, 176

Conread position: 1-366
Cow position: chr29:21248963-21249328 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 350

Conread position: 1-380
Cow position: chr29:21188043-21188424 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 1-380
Cow position: chr29:21207611-21207992 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 1-381
Cow position: chr29:21176816-21177198 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 2-344
Cow position: chr29:19925592-19925265 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 22

Conread position: 2-381
Cow position: chr29:19901540-19901159 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 2-381
Cow position: chr29:19914202-19913821 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 2-381
Cow position: chr29:19938673-19938292 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 2-381
Cow position: chr29:19950859-19950474 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 163

Conread position: 2-381
Cow position: chr29:19961999-19961618 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 2-381
Cow position: chr29:19971530-19971137 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 43

Conread position: 3-380
Cow position: chr29:18741383-18741762 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 153

Conread position: 3-381
Cow position: chr29:20031085-20031464 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 376

Conread position: 3-381
Cow position: chr29:21345853-21345476 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 155

Conread position: 3-381
Cow position: chr29:21440948-21441325 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 153

Conread position: 4-380
Cow position: chr29:21202363-21201985 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 4-380
Cow position: chr29:21229829-21229451 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 4-380
Cow position: chr29:21273059-21272681 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 4-380
Cow position: chr29:21297118-21296740 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 4-380
Cow position: chr29:21328233-21327855 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 4-380
Cow position: chr29:21464479-21464101 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 152

Conread position: 4-380
Cow position: chr29:21487897-21487519 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 151

Conread position: 4-381
Cow position: chr29:18776823-18776444 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 5-319
Cow position: chr29:18714929-18715245 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 196
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 269

Conread position: 6-381
Cow position: chr29:18771395-18771021 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 152

Conread position: 6-381
Cow position: chr29:20192356-20191982 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 160

Conread position: 6-381
Cow position: chr29:21482439-21482065 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 152

Conread position: 18-381
Cow position: chr29:19992809-19993173 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 359

Conread position: 18-381
Cow position: chr29:20003578-20003942 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 359

Conread position: 18-381
Cow position: chr29:20020009-20020373 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 152

Conread position: 30-381
Cow position: chr29:19979400-19979750 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 65

Conread position: 32-335
Cow position: chr29:20217048-20217356 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 191
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 38-340
Cow position: chr3:9710840-9710536 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 196
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 69, 175

Conread position: 32-340
Cow position: chr5:26091799-26092109 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 199
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 79, 87

Conread position: 33-340
Cow position: chr5:26049582-26049891 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 191
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 86, 237

Conread position: 5-367
Cow position: chr7:32718615-32718251 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 226
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 94, 86

Conread position: 12-277
Cow position: chr7:27562165-27562432 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 176
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 13, 22

Conread position: 14-347
Cow position: chr7:32688404-32688069 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 212
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 98, 256

Conread position: 15-340
Cow position: chr7:11628198-11628525 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 198
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 15-353
Cow position: chr7:32748131-32747793 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 220
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 104, 255

Conread position: 31-381
Cow position: chr7:7292711-7292359 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 224
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 58, 75

Conread position: 33-338
Cow position: chr7:32773765-32774072 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 203
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 65, 73

Conread position: 33-344
Cow position: chr7:32757401-32757088 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 198
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 86, 237

Conread position: 33-344
Cow position: chr7:32765270-32764957 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 206
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 86, 237

Conread position: 33-347
Cow position: chr7:32730895-32730579 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 199
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 33-374
Cow position: chr7:32741972-32741629 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 224
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 86, 324

Conread position: 38-381
Cow position: chr7:8794330-8793985 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 218
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 69

Conread position: 39-323
Cow position: chr7:54056631-54056345 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 183
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 58, 52

Conread position: 39-338
Cow position: chr7:8766794-8766493 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 199
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 55, 62

Conread position: 39-338
Cow position: chr7:54118419-54118118 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 189
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 87, 235

Conread position: 39-381
Cow position: chr7:7196764-7197108 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 214
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 110

Conread position: 48-326
Cow position: chr7:11659623-11659343 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 179
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 63, 131

Conread position: 48-338
Cow position: chr8:29349183-29348891 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 191
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 41, 46

Conread position: 5-339
Cow position: chrX:16725587-16725922 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 207
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 108, 122

Conread position: 39-381
Cow position: chrX:16740204-16740548 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 217
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 62