Cow genome map

Conread name: Pig3-SRG8019C14

Conread position: 3-242
Cow position: chr1:31418459-31418228 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 24, 115

Conread position: 3-527
Cow position: chr1:40512969-40512447 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 102

Conread position: 81-657
Cow position: chr1:67328126-67327541 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 379
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 23, 260

Conread position: 93-324
Cow position: chr1:29413992-29413751 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 181
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 27, 156

Conread position: 97-346
Cow position: chr1:58179536-58179287 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 185
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 21

Conread position: 97-386
Cow position: chr1:38387187-38386896 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 206
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 18, 41

Conread position: 99-582
Cow position: chr1:88270051-88269553 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 339
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 53, 26

Conread position: 125-659
Cow position: chr1:67287019-67287551 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 126

Conread position: 129-620
Cow position: chr1:72943730-72944223 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 321
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 22, 91

Conread position: 134-562
Cow position: chr1:98659686-98659254 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 123

Conread position: 153-628
Cow position: chr1:55321928-55321441 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 29

Conread position: 168-382
Cow position: chr1:86610069-86610285 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 8, 15

Conread position: 181-647
Cow position: chr1:30518937-30519409 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 152

Conread position: 182-337
Cow position: chr1:89480194-89480350 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 66, 119

Conread position: 183-659
Cow position: chr1:22842890-22843370 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 159

Conread position: 204-659
Cow position: chr1:23052056-23052502 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 117

Conread position: 265-657
Cow position: chr1:43571074-43570689 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 74

Conread position: 3-275
Cow position: chr10:33347123-33347385 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 199
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 143, 86

Conread position: 3-492
Cow position: chr10:28931289-28930805 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 32

Conread position: 25-659
Cow position: chr10:38545777-38545165 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 86

Conread position: 69-454
Cow position: chr10:15860748-15860371 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 271
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 11, 43

Conread position: 98-465
Cow position: chr10:38847898-38848270 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 40

Conread position: 119-658
Cow position: chr10:3543021-3542479 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 70

Conread position: 125-636
Cow position: chr10:14861464-14861978 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 217

Conread position: 126-316
Cow position: chr10:41631716-41631903 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 25, 58

Conread position: 261-656
Cow position: chr10:7281741-7281340 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 69

Conread position: 325-656
Cow position: chr10:280188-279860 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 9

Conread position: 1-388
Cow position: chr11:39802184-39802563 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 261
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 32

Conread position: 44-652
Cow position: chr11:28049437-28048825 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 44

Conread position: 92-385
Cow position: chr11:30124606-30124301 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 217
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 56, 33

Conread position: 93-500
Cow position: chr11:8283272-8283689 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 305
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 27, 239

Conread position: 120-632
Cow position: chr11:52886203-52885706 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 61

Conread position: 126-509
Cow position: chr11:59369667-59370060 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 255
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 209

Conread position: 129-659
Cow position: chr11:29233409-29232844 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 22

Conread position: 168-563
Cow position: chr11:11677241-11677639 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 135

Conread position: 234-659
Cow position: chr11:9157189-9156767 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 5

Conread position: 247-656
Cow position: chr11:26124957-26124541 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 99

Conread position: 259-659
Cow position: chr11:12093544-12093955 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 79

Conread position: 269-659
Cow position: chr11:46246562-46246160 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 57

Conread position: 62-652
Cow position: chr12:1869358-1869969 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 31

Conread position: 78-429
Cow position: chr12:369710-370071 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 239
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 142

Conread position: 119-659
Cow position: chr12:348534-349092 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 365
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 33, 322

Conread position: 142-274
Cow position: chr12:15950485-15950351 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 1-657
Cow position: chr13:43983276-43982629 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 107

Conread position: 2-321
Cow position: chr13:15451424-15451125 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 214
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 154, 19

Conread position: 6-390
Cow position: chr13:34767056-34766684 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 271
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 229, 37

Conread position: 6-407
Cow position: chr13:48357354-48357768 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 294
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 34, 68

Conread position: 25-659
Cow position: chr13:20542219-20541581 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 11

Conread position: 52-581
Cow position: chr13:26843964-26844461 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 17

Conread position: 124-548
Cow position: chr13:46731807-46731386 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 43

Conread position: 174-651
Cow position: chr13:22185267-22184800 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 326
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 52, 23

Conread position: 197-530
Cow position: chr13:11064176-11063853 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 241
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 48, 16

Conread position: 1-525
Cow position: chr14:37413792-37413243 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 26

Conread position: 1-658
Cow position: chr14:38146677-38147354 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 20

Conread position: 14-659
Cow position: chr14:34775918-34776576 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 7

Conread position: 25-659
Cow position: chr14:44377517-44378134 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 76

Conread position: 36-659
Cow position: chr14:44257276-44256633 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 27

Conread position: 130-498
Cow position: chr14:33341928-33342305 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 206

Conread position: 153-657
Cow position: chr14:41408702-41409214 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 25

Conread position: 154-559
Cow position: chr14:47922934-47923339 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 285
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 75, 8

Conread position: 155-502
Cow position: chr14:45833976-45834321 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 246
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 53, 11

Conread position: 3-305
Cow position: chr15:35648223-35647927 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 244, 20

Conread position: 3-562
Cow position: chr15:24794049-24794585 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 90

Conread position: 25-450
Cow position: chr15:36642645-36643059 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 72

Conread position: 27-297
Cow position: chr15:23264783-23265041 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 195
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 129, 17

Conread position: 80-467
Cow position: chr15:1664235-1664617 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 257
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 9, 216

Conread position: 99-657
Cow position: chr15:498530-499076 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 65

Conread position: 120-659
Cow position: chr15:2413770-2413234 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 5

Conread position: 120-659
Cow position: chr15:9429737-9430274 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 68

Conread position: 125-480
Cow position: chr15:12615274-12615619 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 252
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 27, 55

Conread position: 125-653
Cow position: chr15:36626477-36625940 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 92

Conread position: 126-620
Cow position: chr15:21449498-21449980 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 41

Conread position: 131-659
Cow position: chr15:16507786-16508325 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 215

Conread position: 136-659
Cow position: chr15:40105674-40106197 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 189

Conread position: 153-556
Cow position: chr15:7787875-7787476 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 265
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 82, 98

Conread position: 154-658
Cow position: chr15:1237513-1238014 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 176

Conread position: 163-656
Cow position: chr15:20357063-20356585 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 323
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 88, 51

Conread position: 198-502
Cow position: chr15:17218530-17218227 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 209
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 78, 25

Conread position: 222-656
Cow position: chr15:10888517-10888948 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 22

Conread position: 276-656
Cow position: chr15:44069874-44070259 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 50

Conread position: 1-281
Cow position: chr16:18499373-18499106 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 207
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 151, 95

Conread position: 3-659
Cow position: chr16:25257273-25257927 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 114

Conread position: 6-632
Cow position: chr16:49235476-49234867 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 87

Conread position: 25-306
Cow position: chr16:49256764-49256490 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 191
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 77, 97

Conread position: 29-550
Cow position: chr16:25156527-25155999 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 60

Conread position: 99-625
Cow position: chr16:47473009-47473532 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 88

Conread position: 109-248
Cow position: chr16:37457157-37457015 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 43, 16

Conread position: 125-510
Cow position: chr16:5889969-5890349 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 116

Conread position: 125-632
Cow position: chr16:16272156-16271648 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 60

Conread position: 133-636
Cow position: chr16:42739642-42739144 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 43

Conread position: 162-659
Cow position: chr16:23807904-23808415 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 211

Conread position: 266-656
Cow position: chr16:28471509-28471114 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 67

Conread position: 1-580
Cow position: chr17:12670163-12669598 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 22

Conread position: 1-659
Cow position: chr17:42264830-42265469 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 95

Conread position: 5-276
Cow position: chr17:22557918-22558175 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 68, 83

Conread position: 5-295
Cow position: chr17:20401997-20402272 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 144, 91

Conread position: 7-649
Cow position: chr17:18300482-18299841 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 93

Conread position: 126-634
Cow position: chr17:4082076-4082589 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 220

Conread position: 129-498
Cow position: chr17:20488022-20488398 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 271
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 23, 214

Conread position: 153-658
Cow position: chr17:19019626-19020136 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 25

Conread position: 276-656
Cow position: chr17:6068740-6069116 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 58

Conread position: 1-628
Cow position: chr18:8168794-8169448 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 26

Conread position: 5-306
Cow position: chr18:51275822-51275526 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 212
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 44, 71

Conread position: 180-644
Cow position: chr18:29765252-29765735 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 173

Conread position: 3-245
Cow position: chr19:44532575-44532814 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 165
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 160, 111

Conread position: 3-536
Cow position: chr19:352521-351999 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 68

Conread position: 5-631
Cow position: chr19:3138057-3138689 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 88

Conread position: 25-652
Cow position: chr19:27052378-27051738 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 174

Conread position: 92-339
Cow position: chr19:32222821-32222560 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 28

Conread position: 125-649
Cow position: chr19:39669276-39668746 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 214

Conread position: 153-658
Cow position: chr19:32203416-32203921 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 343
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 62, 71

Conread position: 183-502
Cow position: chr19:14213708-14213388 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 227
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 46, 118

Conread position: 260-621
Cow position: chr19:136632-136277 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 76

Conread position: 266-654
Cow position: chr19:204339-204730 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 64

Conread position: 1-436
Cow position: chr2:28747725-28748145 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 280
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 296, 26

Conread position: 3-297
Cow position: chr2:16289126-16289405 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 217
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 246, 65

Conread position: 3-638
Cow position: chr2:5485384-5484785 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 22

Conread position: 3-659
Cow position: chr2:63292576-63291882 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 116

Conread position: 20-295
Cow position: chr2:782146-781881 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 199
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 132, 69

Conread position: 25-656
Cow position: chr2:34565017-34564409 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 77

Conread position: 97-631
Cow position: chr2:35355339-35355885 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 28

Conread position: 98-656
Cow position: chr2:36030685-36030144 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 23

Conread position: 110-653
Cow position: chr2:11729538-11730074 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 8

Conread position: 120-659
Cow position: chr2:7902695-7903258 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 130

Conread position: 125-428
Cow position: chr2:1362837-1363148 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 219
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 31, 99

Conread position: 125-659
Cow position: chr2:39622303-39622827 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 81

Conread position: 140-657
Cow position: chr2:11692258-11692758 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 84

Conread position: 183-659
Cow position: chr2:38373149-38373617 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 317
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 43, 120

Conread position: 125-659
Cow position: chr20:18315102-18314605 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 364
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 153, 34

Conread position: 153-659
Cow position: chr20:8992999-8992486 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 13

Conread position: 168-633
Cow position: chr20:20754238-20753784 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 315
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 76, 24

Conread position: 3-659
Cow position: chr21:9892144-9892758 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 87

Conread position: 21-631
Cow position: chr21:359586-360177 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 76

Conread position: 25-657
Cow position: chr21:23861521-23862174 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 38

Conread position: 125-656
Cow position: chr21:2540773-2540244 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 61

Conread position: 129-532
Cow position: chr21:34054011-34053609 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 271
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 20, 213

Conread position: 168-504
Cow position: chr21:20744147-20743814 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 235
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 95, 82

Conread position: 192-654
Cow position: chr21:23812553-23813023 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 143

Conread position: 1-625
Cow position: chr22:3306371-3305755 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 73

Conread position: 3-323
Cow position: chr22:1283294-1282974 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 237
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 149, 106

Conread position: 3-656
Cow position: chr22:35907364-35906728 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 91

Conread position: 4-561
Cow position: chr22:13917868-13918416 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 92

Conread position: 25-502
Cow position: chr22:1322182-1322645 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 64

Conread position: 25-659
Cow position: chr22:6503094-6502458 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 79

Conread position: 134-559
Cow position: chr22:37132577-37133000 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 107

Conread position: 135-653
Cow position: chr22:11031902-11032425 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 121

Conread position: 136-657
Cow position: chr22:36269384-36269890 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 15

Conread position: 48-658
Cow position: chr23:16615354-16614760 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 67

Conread position: 152-659
Cow position: chr23:2341257-2341773 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 68

Conread position: 153-473
Cow position: chr23:9545748-9546069 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 239
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 103, 29

Conread position: 205-537
Cow position: chr23:31595027-31594693 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 231
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 17, 7

Conread position: 270-657
Cow position: chr23:27399793-27400182 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 56

Conread position: 1-426
Cow position: chr24:36708371-36708798 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 306
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 130, 22

Conread position: 1-643
Cow position: chr24:13302449-13301772 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 9

Conread position: 1-651
Cow position: chr24:16648874-16648224 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 104

Conread position: 4-540
Cow position: chr24:14333584-14334111 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 89

Conread position: 26-426
Cow position: chr24:17313402-17313017 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 278
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 124, 68

Conread position: 119-290
Cow position: chr24:583528-583361 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 146, 31

Conread position: 125-561
Cow position: chr24:6336068-6336506 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 217

Conread position: 125-639
Cow position: chr24:36559544-36559013 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 65

Conread position: 127-502
Cow position: chr24:7090957-7090559 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 57

Conread position: 129-659
Cow position: chr24:38637764-38638298 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 180

Conread position: 153-407
Cow position: chr24:32332275-32332535 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 93, 27

Conread position: 153-653
Cow position: chr24:12206055-12205556 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 25

Conread position: 153-658
Cow position: chr24:16472147-16472658 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 25

Conread position: 153-659
Cow position: chr24:14280830-14280339 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 343
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 72, 14

Conread position: 269-643
Cow position: chr24:12130599-12130226 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 49

Conread position: 270-656
Cow position: chr24:22971466-22971854 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 49

Conread position: 1-452
Cow position: chr25:23344854-23344384 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 321
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 34, 20

Conread position: 1-626
Cow position: chr25:11933040-11932412 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 92

Conread position: 73-462
Cow position: chr25:18094332-18094724 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 18

Conread position: 197-657
Cow position: chr25:18422279-18422739 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 324
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 140

Conread position: 165-402
Cow position: chr27:8567901-8568144 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 99, 187

Conread position: 3-223
Cow position: chr28:11356979-11356769 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 149, 87

Conread position: 20-656
Cow position: chr28:10647293-10646679 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 34

Conread position: 22-645
Cow position: chr28:10497939-10497311 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 107

Conread position: 25-402
Cow position: chr28:21359431-21359806 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 248
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 140, 64

Conread position: 25-654
Cow position: chr28:5797858-5798463 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 14

Conread position: 111-623
Cow position: chr28:5813180-5813702 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 9

Conread position: 129-306
Cow position: chr28:24704419-24704608 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 23, 182

Conread position: 132-649
Cow position: chr28:2989049-2988524 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 33

Conread position: 141-339
Cow position: chr28:8721146-8720946 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 118, 10

Conread position: 164-549
Cow position: chr28:3020518-3020139 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 85

Conread position: 182-659
Cow position: chr28:10071528-10071999 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 47

Conread position: 30-655
Cow position: chr29:15949480-15948874 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 60

Conread position: 85-636
Cow position: chr29:802826-802265 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 35

Conread position: 125-655
Cow position: chr29:14085980-14085445 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 109

Conread position: 239-656
Cow position: chr29:5957872-5958288 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 110

Conread position: 275-656
Cow position: chr29:27980621-27980240 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 51

Conread position: 3-656
Cow position: chr3:52864178-52863529 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 93

Conread position: 3-659
Cow position: chr3:6685738-6686413 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 350

Conread position: 3-659
Cow position: chr3:24643147-24643788 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 30

Conread position: 11-482
Cow position: chr3:24591351-24590896 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 83

Conread position: 25-541
Cow position: chr3:66991071-66991572 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 60

Conread position: 29-490
Cow position: chr3:64357856-64357411 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 90

Conread position: 48-656
Cow position: chr3:2907755-2907169 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 27

Conread position: 79-641
Cow position: chr3:46015674-46016220 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 10

Conread position: 99-659
Cow position: chr3:49333830-49334392 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 24

Conread position: 125-635
Cow position: chr3:15178774-15179281 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 95

Conread position: 137-296
Cow position: chr3:50127639-50127474 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 152-634
Cow position: chr3:49272401-49271910 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 328
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 22, 35

Conread position: 170-545
Cow position: chr3:21304683-21304304 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 256
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 7, 40

Conread position: 185-611
Cow position: chr3:27979055-27979479 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 275
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 34

Conread position: 185-651
Cow position: chr3:26836629-26836209 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 324
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 422, 67

Conread position: 203-617
Cow position: chr3:3981894-3982306 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 131

Conread position: 3-607
Cow position: chr4:28831118-28831691 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 88

Conread position: 25-656
Cow position: chr4:46664297-46664929 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 71

Conread position: 98-656
Cow position: chr4:34184668-34184133 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 75

Conread position: 108-656
Cow position: chr4:60264306-60263755 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 12

Conread position: 129-473
Cow position: chr4:11385633-11385965 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 249
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 27, 81

Conread position: 130-477
Cow position: chr4:14549865-14550208 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 235
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 25, 208

Conread position: 172-657
Cow position: chr4:51043333-51042844 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 116

Conread position: 305-538
Cow position: chr4:43454729-43454961 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 52, 28

Conread position: 1-400
Cow position: chr5:18272394-18272792 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 268
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 211, 92

Conread position: 1-657
Cow position: chr5:27001902-27002521 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 109

Conread position: 2-325
Cow position: chr5:25000371-25000047 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 224
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 183, 100

Conread position: 3-421
Cow position: chr5:41962087-41961673 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 90

Conread position: 3-611
Cow position: chr5:46659905-46660489 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 78

Conread position: 3-659
Cow position: chr5:29435701-29435094 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 115

Conread position: 25-637
Cow position: chr5:41528877-41528275 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 80

Conread position: 53-324
Cow position: chr5:26068405-26068138 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 202, 40

Conread position: 129-659
Cow position: chr5:35525778-35526312 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 53

Conread position: 146-421
Cow position: chr5:27058731-27058474 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 5, 0

Conread position: 153-651
Cow position: chr5:14658655-14658150 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 84

Conread position: 185-631
Cow position: chr5:39246976-39246529 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 33

Conread position: 3-317
Cow position: chr6:42616457-42616754 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 208
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 302, 88

Conread position: 25-406
Cow position: chr6:6476145-6475762 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 274
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 126, 68

Conread position: 27-656
Cow position: chr6:10643561-10644183 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 92

Conread position: 47-526
Cow position: chr6:33995287-33994811 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 327
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 106, 35

Conread position: 112-659
Cow position: chr6:8021012-8021543 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 16

Conread position: 129-659
Cow position: chr6:15477010-15477562 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 211

Conread position: 197-654
Cow position: chr6:44550918-44550456 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 142

Conread position: 3-334
Cow position: chr7:3155199-3155532 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 238
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 149, 27

Conread position: 25-652
Cow position: chr7:68908430-68909049 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 71

Conread position: 25-656
Cow position: chr7:29470562-29471193 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 14

Conread position: 29-640
Cow position: chr7:29370152-29369574 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 53

Conread position: 30-550
Cow position: chr7:4415485-4416003 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 58

Conread position: 91-306
Cow position: chr7:6488298-6488084 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 29

Conread position: 93-399
Cow position: chr7:54644344-54644036 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 63, 32

Conread position: 99-659
Cow position: chr7:58377597-58377036 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 28

Conread position: 119-412
Cow position: chr7:1734603-1734298 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 217
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 197

Conread position: 125-655
Cow position: chr7:51014464-51015000 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 43

Conread position: 155-563
Cow position: chr7:21310732-21311121 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 182-459
Cow position: chr7:59683537-59683810 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 62, 77

Conread position: 3-249
Cow position: chr8:16083952-16084191 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 157, 87

Conread position: 3-297
Cow position: chr8:44076291-44076001 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 149, 20

Conread position: 3-653
Cow position: chr8:38606918-38606280 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 83

Conread position: 3-656
Cow position: chr8:11969990-11969361 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 20

Conread position: 5-649
Cow position: chr8:42468020-42468637 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 83

Conread position: 26-659
Cow position: chr8:24419911-24419296 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 93

Conread position: 125-563
Cow position: chr8:47673547-47673982 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 57

Conread position: 125-643
Cow position: chr8:58186816-58186303 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 119

Conread position: 125-659
Cow position: chr8:42161029-42160501 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 44

Conread position: 129-534
Cow position: chr8:34527648-34527242 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 265
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 22, 100

Conread position: 182-659
Cow position: chr8:48786623-48787097 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 337
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 90, 70

Conread position: 270-656
Cow position: chr8:47661789-47661398 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 60

Conread position: 6-324
Cow position: chr9:2001084-2000756 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 236
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 33, 118

Conread position: 13-305
Cow position: chr9:34721409-34721697 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 139, 80

Conread position: 52-656
Cow position: chr9:3803307-3803923 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 70

Conread position: 93-470
Cow position: chr9:3354679-3354295 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 27

Conread position: 98-297
Cow position: chr9:43663567-43663772 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 23, 109

Conread position: 114-658
Cow position: chr9:59425782-59426344 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 132

Conread position: 115-307
Cow position: chr9:44795098-44795295 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 6

Conread position: 125-636
Cow position: chr9:13476855-13476326 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 225

Conread position: 125-659
Cow position: chr9:28688123-28688680 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 225

Conread position: 135-658
Cow position: chr9:47544791-47545313 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 34

Conread position: 153-419
Cow position: chr9:63854641-63854915 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 71, 28

Conread position: 153-657
Cow position: chr9:3937356-3936862 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 192

Conread position: 1-537
Cow position: chrX:22130433-22129882 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 86

Conread position: 1-659
Cow position: chrX:13052866-13053488 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 10

Conread position: 3-297
Cow position: chrX:21587363-21587650 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 203
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 226, 93

Conread position: 3-659
Cow position: chrX:17668048-17667400 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 86

Conread position: 4-654
Cow position: chrX:6282911-6282276 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 19

Conread position: 25-656
Cow position: chrX:2536614-2535970 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 69

Conread position: 83-541
Cow position: chrX:2143635-2144074 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 14

Conread position: 86-540
Cow position: chrX:24112923-24112468 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 296
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 10, 46

Conread position: 93-323
Cow position: chrX:30004072-30004314 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 95

Conread position: 119-657
Cow position: chrX:20697149-20696622 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 66

Conread position: 151-659
Cow position: chrX:4410647-4411161 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 14

Conread position: 153-653
Cow position: chrX:18534463-18534944 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 83

Conread position: 153-657
Cow position: chrX:31081943-31082446 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 28

Conread position: 153-659
Cow position: chrX:13417445-13416944 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 83

Conread position: 157-659
Cow position: chrX:44387099-44387602 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 25

Conread position: 256-500
Cow position: chrX:5299148-5298898 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 194
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 22, 78

Conread position: 268-656
Cow position: chrX:320559-320949 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 58