Cow genome map
| Conread name: | Pig4-TMW8018L10 |
| Conread position: | 54-369 |
| Cow position: | chr1:21691011-21691325 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 86, 11 |
| Conread position: | 86-278 |
| Cow position: | chr1:29225630-29225440 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 104, 15 |
| Conread position: | 88-432 |
| Cow position: | chr1:5265418-5265760 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 219 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 216, 13 |
| Conread position: | 88-441 |
| Cow position: | chr1:50942090-50942445 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 129, 51 |
| Conread position: | 89-365 |
| Cow position: | chr1:97675044-97675321 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 128, 32 |
| Conread position: | 90-267 |
| Cow position: | chr1:76612491-76612664 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 90-365 |
| Cow position: | chr1:2543233-2543509 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 189, 43 |
| Conread position: | 91-385 |
| Cow position: | chr1:55155812-55156109 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 103, 126 |
| Conread position: | 105-331 |
| Cow position: | chr1:40646457-40646221 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 82, 46 |
| Conread position: | 5-559 |
| Cow position: | chr10:52102234-52101670 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 86-322 |
| Cow position: | chr10:23138507-23138275 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 187, 55 |
| Conread position: | 86-386 |
| Cow position: | chr10:57502039-57501736 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 30, 86 |
| Conread position: | 126-387 |
| Cow position: | chr10:47965745-47966003 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 185, 17 |
| Conread position: | 85-432 |
| Cow position: | chr11:9762895-9763246 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 96, 10 |
| Conread position: | 86-388 |
| Cow position: | chr11:65980102-65980402 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 131, 96 |
| Conread position: | 88-365 |
| Cow position: | chr11:53682273-53681988 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 17 |
| Conread position: | 88-387 |
| Cow position: | chr11:54484562-54484862 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 99, 52 |
| Conread position: | 90-316 |
| Cow position: | chr11:49409563-49409347 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 189, 16 |
| Conread position: | 91-367 |
| Cow position: | chr11:23127051-23127325 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 103, 77 |
| Conread position: | 96-371 |
| Cow position: | chr11:31258642-31258368 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 97, 91 |
| Conread position: | 85-302 |
| Cow position: | chr12:486023-485806 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 120, 17 |
| Conread position: | 86-353 |
| Cow position: | chr12:6405500-6405769 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 179, 175 |
| Conread position: | 86-369 |
| Cow position: | chr12:5369953-5369671 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 5, 75 |
| Conread position: | 87-374 |
| Cow position: | chr12:27931763-27932056 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 55, 62 |
| Conread position: | 90-283 |
| Cow position: | chr12:19222129-19221936 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 90, 127 |
| Conread position: | 90-304 |
| Cow position: | chr12:37423368-37423586 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 167, 43 |
| Conread position: | 96-433 |
| Cow position: | chr12:366497-366835 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 35, 114 |
| Conread position: | 67-361 |
| Cow position: | chr13:27898152-27898450 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 6 |
| Conread position: | 87-366 |
| Cow position: | chr13:38070941-38071213 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 182, 27 |
| Conread position: | 88-312 |
| Cow position: | chr13:30119274-30119491 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 13, 41 |
| Conread position: | 90-273 |
| Cow position: | chr13:51582879-51582697 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 41, 108 |
| Conread position: | 90-386 |
| Cow position: | chr13:34041419-34041713 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 175, 34 |
| Conread position: | 91-281 |
| Cow position: | chr13:21602625-21602437 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 96-352 |
| Cow position: | chr13:8796878-8797136 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 63, 32 |
| Conread position: | 108-305 |
| Cow position: | chr13:11739984-11740179 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 86, 97 |
| Conread position: | 156-431 |
| Cow position: | chr13:60333625-60333348 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 11, 24 |
| Conread position: | 67-283 |
| Cow position: | chr14:3279312-3279097 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 128, 19 |
| Conread position: | 86-388 |
| Cow position: | chr14:33674208-33673912 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 108, 34 |
| Conread position: | 102-305 |
| Cow position: | chr14:29705840-29705641 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 94, 22 |
| Conread position: | 105-356 |
| Cow position: | chr14:2292218-2291969 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 91, 100 |
| Conread position: | 111-432 |
| Cow position: | chr14:20909526-20909203 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 42, 86 |
| Conread position: | 88-313 |
| Cow position: | chr15:48284489-48284264 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 105, 77 |
| Conread position: | 89-304 |
| Cow position: | chr15:20915876-20916091 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 118, 41 |
| Conread position: | 90-363 |
| Cow position: | chr15:8811228-8811503 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 41, 59 |
| Conread position: | 91-271 |
| Cow position: | chr15:37457426-37457246 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 103, 114 |
| Conread position: | 91-385 |
| Cow position: | chr15:33494428-33494130 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 28, 174 |
| Conread position: | 67-285 |
| Cow position: | chr16:48911889-48912106 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 16 |
| Conread position: | 85-430 |
| Cow position: | chr16:33341411-33341057 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 193, 173 |
| Conread position: | 88-432 |
| Cow position: | chr16:23721175-23721528 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 42 |
| Conread position: | 90-302 |
| Cow position: | chr16:36160918-36160701 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 92, 124 |
| Conread position: | 94-395 |
| Cow position: | chr16:15526322-15526018 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 20 |
| Conread position: | 143-387 |
| Cow position: | chr16:12668367-12668612 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 21, 30 |
| Conread position: | 90-363 |
| Cow position: | chr17:40805834-40805559 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 116, 127 |
| Conread position: | 102-371 |
| Cow position: | chr17:16899299-16899565 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 109, 66 |
| Conread position: | 107-322 |
| Cow position: | chr17:11748755-11748539 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 86-363 |
| Cow position: | chr18:16869655-16869385 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 132, 10 |
| Conread position: | 89-465 |
| Cow position: | chr18:35313605-35313228 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 184, 53 |
| Conread position: | 90-363 |
| Cow position: | chr18:28972651-28972925 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 175, 43 |
| Conread position: | 90-386 |
| Cow position: | chr18:16175382-16175681 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 23, 35 |
| Conread position: | 113-323 |
| Cow position: | chr18:37335497-37335284 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 76, 69 |
| Conread position: | 90-363 |
| Cow position: | chr19:5652485-5652760 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 80, 20 |
| Conread position: | 91-495 |
| Cow position: | chr19:8576349-8576750 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 77, 70 |
| Conread position: | 92-542 |
| Cow position: | chr19:11952547-11952091 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 293 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 186, 247 |
| Conread position: | 114-304 |
| Cow position: | chr19:52842771-52842579 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 103, 19 |
| Conread position: | 126-431 |
| Cow position: | chr19:19011213-19010907 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 152, 82 |
| Conread position: | 86-376 |
| Cow position: | chr2:84614265-84614542 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 97 |
| Conread position: | 86-433 |
| Cow position: | chr2:64580210-64580554 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 108, 75 |
| Conread position: | 87-361 |
| Cow position: | chr2:12516508-12516774 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 107, 56 |
| Conread position: | 88-351 |
| Cow position: | chr2:13707832-13707579 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 225, 42 |
| Conread position: | 88-385 |
| Cow position: | chr2:69140614-69140312 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 25, 56 |
| Conread position: | 88-389 |
| Cow position: | chr2:40453594-40453294 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 30, 60 |
| Conread position: | 90-353 |
| Cow position: | chr2:44993454-44993195 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 104, 53 |
| Conread position: | 96-385 |
| Cow position: | chr2:41938978-41938685 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 110, 34 |
| Conread position: | 96-451 |
| Cow position: | chr2:38013326-38012964 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 182, 119 |
| Conread position: | 109-369 |
| Cow position: | chr2:3970648-3970388 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 178, 149 |
| Conread position: | 86-374 |
| Cow position: | chr20:20410351-20410636 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 232 |
| Conread position: | 89-435 |
| Cow position: | chr20:5374401-5374740 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 64, 129 |
| Conread position: | 90-471 |
| Cow position: | chr20:2399830-2399435 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 104, 94 |
| Conread position: | 85-413 |
| Cow position: | chr21:16693539-16693216 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 53, 31 |
| Conread position: | 86-354 |
| Cow position: | chr21:25782952-25782681 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 31, 45 |
| Conread position: | 88-304 |
| Cow position: | chr21:21138796-21138581 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 129, 76 |
| Conread position: | 90-422 |
| Cow position: | chr21:23943475-23943806 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 179, 20 |
| Conread position: | 94-313 |
| Cow position: | chr21:17167862-17167643 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 20 |
| Conread position: | 53-385 |
| Cow position: | chr22:40721648-40721318 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 62, 18 |
| Conread position: | 87-363 |
| Cow position: | chr22:36860397-36860668 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 178, 121 |
| Conread position: | 88-281 |
| Cow position: | chr22:35163189-35162991 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 16, 192 |
| Conread position: | 89-444 |
| Cow position: | chr22:10560145-10559797 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 48, 55 |
| Conread position: | 90-365 |
| Cow position: | chr22:44935109-44934832 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 175, 171 |
| Conread position: | 91-297 |
| Cow position: | chr22:16013876-16013674 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 79, 51 |
| Conread position: | 91-333 |
| Cow position: | chr22:202857-202614 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 224, 187 |
| Conread position: | 114-369 |
| Cow position: | chr22:35913048-35913300 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 80, 91 |
| Conread position: | 86-331 |
| Cow position: | chr23:32892230-32892475 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 110, 24 |
| Conread position: | 89-305 |
| Cow position: | chr23:29402581-29402797 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 105, 44 |
| Conread position: | 90-374 |
| Cow position: | chr23:2025942-2026228 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 132, 120 |
| Conread position: | 91-371 |
| Cow position: | chr23:17186845-17186572 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 195, 98 |
| Conread position: | 88-320 |
| Cow position: | chr24:27127853-27128083 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 69, 178 |
| Conread position: | 90-333 |
| Cow position: | chr24:1490890-1490643 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 38 |
| Conread position: | 90-363 |
| Cow position: | chr24:29188516-29188241 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 175, 171 |
| Conread position: | 90-531 |
| Cow position: | chr24:16856199-16855765 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 185, 52 |
| Conread position: | 90-387 |
| Cow position: | chr25:37974194-37973901 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 106, 93 |
| Conread position: | 87-366 |
| Cow position: | chr26:28378925-28378648 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 41, 27 |
| Conread position: | 88-312 |
| Cow position: | chr26:16162007-16162233 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 90-385 |
| Cow position: | chr26:18958865-18959158 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 104, 75 |
| Conread position: | 97-468 |
| Cow position: | chr26:8614035-8614403 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 243 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 97, 32 |
| Conread position: | 85-312 |
| Cow position: | chr27:7419880-7419652 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 202, 58 |
| Conread position: | 87-365 |
| Cow position: | chr28:5750518-5750798 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 178, 174 |
| Conread position: | 91-430 |
| Cow position: | chr28:27678734-27678402 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 185, 120 |
| Conread position: | 88-313 |
| Cow position: | chr29:38237369-38237598 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 90-353 |
| Cow position: | chr29:34798658-34798923 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 189, 248 |
| Conread position: | 126-387 |
| Cow position: | chr29:28811523-28811261 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 72, 58 |
| Conread position: | 87-290 |
| Cow position: | chr3:37989963-37989761 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 107, 34 |
| Conread position: | 88-354 |
| Cow position: | chr3:24644299-24644036 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 191, 101 |
| Conread position: | 90-354 |
| Cow position: | chr3:79314993-79314728 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 31, 73 |
| Conread position: | 90-387 |
| Cow position: | chr3:79431641-79431938 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 104, 49 |
| Conread position: | 90-433 |
| Cow position: | chr3:7313890-7314238 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 96, 12 |
| Conread position: | 96-468 |
| Cow position: | chr3:43305895-43306262 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 32, 38 |
| Conread position: | 97-432 |
| Cow position: | chr3:28300766-28300431 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 197, 108 |
| Conread position: | 97-432 |
| Cow position: | chr3:43429561-43429911 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 64, 102 |
| Conread position: | 87-363 |
| Cow position: | chr4:16639486-16639209 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 192, 37 |
| Conread position: | 88-516 |
| Cow position: | chr4:11836795-11837213 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 277 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 191, 8 |
| Conread position: | 90-305 |
| Cow position: | chr4:45527713-45527498 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 104, 53 |
| Conread position: | 92-385 |
| Cow position: | chr4:14514062-14514359 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 34, 18 |
| Conread position: | 97-371 |
| Cow position: | chr4:47701307-47701036 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 67, 86 |
| Conread position: | 107-388 |
| Cow position: | chr4:10062284-10062000 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 21, 30 |
| Conread position: | 84-369 |
| Cow position: | chr5:20429033-20428749 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 188, 37 |
| Conread position: | 87-363 |
| Cow position: | chr5:57481567-57481845 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 107, 130 |
| Conread position: | 88-387 |
| Cow position: | chr5:75624660-75624357 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 92, 17 |
| Conread position: | 86-381 |
| Cow position: | chr6:32448797-32449092 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 189, 79 |
| Conread position: | 90-363 |
| Cow position: | chr6:39438874-39438599 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 122, 127 |
| Conread position: | 90-374 |
| Cow position: | chr6:58027783-58027496 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 124, 249 |
| Conread position: | 86-354 |
| Cow position: | chr7:33003006-33002749 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 226, 9 |
| Conread position: | 88-285 |
| Cow position: | chr7:40006652-40006844 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 106, 39 |
| Conread position: | 90-386 |
| Cow position: | chr7:21126462-21126761 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 175, 171 |
| Conread position: | 91-422 |
| Cow position: | chr7:66020338-66020663 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 34, 44 |
| Conread position: | 93-308 |
| Cow position: | chr7:60589919-60589702 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 87-353 |
| Cow position: | chr8:47660930-47661197 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 122, 37 |
| Conread position: | 90-312 |
| Cow position: | chr8:42870252-42870029 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 104, 52 |
| Conread position: | 90-369 |
| Cow position: | chr8:51507676-51507956 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 136-431 |
| Cow position: | chr8:47683134-47682833 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 149, 7 |
| Conread position: | 86-285 |
| Cow position: | chr9:45151217-45151019 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 87-334 |
| Cow position: | chr9:21110441-21110194 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 44, 61 |
| Conread position: | 88-365 |
| Cow position: | chr9:52292443-52292173 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 82, 45 |
| Conread position: | 85-433 |
| Cow position: | chrX:18553379-18553025 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 109, 132 |
| Conread position: | 88-312 |
| Cow position: | chrX:24523694-24523469 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 37, 55 |
| Conread position: | 88-332 |
| Cow position: | chrX:12017413-12017651 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 108, 14 |
| Conread position: | 88-354 |
| Cow position: | chrX:15308987-15309249 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 222, 123 |
| Conread position: | 88-381 |
| Cow position: | chrX:21731814-21732111 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 18, 75 |
| Conread position: | 88-381 |
| Cow position: | chrX:38890939-38890642 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 129, 110 |
| Conread position: | 88-418 |
| Cow position: | chrX:1447029-1447363 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 68, 14 |
| Conread position: | 90-286 |
| Cow position: | chrX:24080857-24080659 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 90-432 |
| Cow position: | chrX:18842027-18842369 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 104, 25 |
| Conread position: | 90-436 |
| Cow position: | chrX:11492648-11492294 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 95, 43 |
| Conread position: | 91-374 |
| Cow position: | chrX:4797268-4796983 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 174, 170 |
| Conread position: | 91-548 |
| Cow position: | chrX:17613081-17613545 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 303 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 96, 121 |
| Conread position: | 93-433 |
| Cow position: | chrX:1391882-1391535 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 101, 63 |
| Conread position: | 110-344 |
| Cow position: | chrX:21275987-21276222 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 179, 33 |