Cow genome map

Conread name: Pig4-TMW8042M05

Conread position: 156-329
Cow position: chr1:81580474-81580298 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 178-310
Cow position: chr1:78690478-78690347 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 200-348
Cow position: chr1:67919039-67918890 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 80, 45

Conread position: 203-351
Cow position: chr1:65530810-65530960 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 77, 14

Conread position: 203-351
Cow position: chr1:65546662-65546808 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 77, 14

Conread position: 204-330
Cow position: chr1:26069840-26069965 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 76, 20

Conread position: 204-352
Cow position: chr1:95153460-95153314 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 128, 22

Conread position: 220-331
Cow position: chr1:65883414-65883302 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 220-354
Cow position: chr1:61030985-61030846 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 220-374
Cow position: chr1:24445379-24445533 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 133

Conread position: 220-394
Cow position: chr1:81613683-81613502 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 60, 109

Conread position: 226-424
Cow position: chr1:77880461-77880663 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 164

Conread position: 354-552
Cow position: chr1:95618547-95618748 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 137
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 374-528
Cow position: chr1:101268071-101267922 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 378-528
Cow position: chr1:85712372-85712522 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 55, 27

Conread position: 387-529
Cow position: chr1:72422467-72422326 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 41, 31

Conread position: 404-528
Cow position: chr1:72813572-72813698 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 45

Conread position: 405-528
Cow position: chr1:54157252-54157378 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 411-528
Cow position: chr1:73721324-73721442 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 414-528
Cow position: chr1:38706887-38706772 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 418-525
Cow position: chr1:242530-242636 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 5, 13

Conread position: 418-528
Cow position: chr1:8670745-8670855 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 422-529
Cow position: chr1:42138834-42138941 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-525
Cow position: chr1:6788306-6788204 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-525
Cow position: chr1:48581106-48581208 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-526
Cow position: chr1:22730711-22730814 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 423-527
Cow position: chr1:28470803-28470907 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-527
Cow position: chr1:102346059-102345956 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 423-528
Cow position: chr1:5023785-5023680 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr1:22035589-22035693 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 423-528
Cow position: chr1:31357532-31357427 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr1:42360263-42360370 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 423-528
Cow position: chr1:48769779-48769884 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr1:80336272-80336167 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 423-529
Cow position: chr1:57089702-57089596 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 423-529
Cow position: chr1:64804125-64804019 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-534
Cow position: chr1:51531730-51531839 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 423-550
Cow position: chr1:101946737-101946611 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 121, 0

Conread position: 424-522
Cow position: chr1:65103599-65103696 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 424-527
Cow position: chr1:4374359-4374256 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-527
Cow position: chr1:21787314-21787417 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr1:23512682-23512577 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 424-528
Cow position: chr1:45223559-45223663 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr1:54258545-54258648 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 424-528
Cow position: chr1:55428979-55428874 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 424-528
Cow position: chr1:71916141-71916038 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 92
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 424-528
Cow position: chr1:87095236-87095132 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr1:87936876-87936980 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr1:95835820-95835716 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr1:21560990-21561095 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr1:31934485-31934590 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr1:65318553-65318658 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr1:98576026-98576130 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 424-529
Cow position: chr1:101792141-101792036 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr1:30504479-30504590 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr1:53425154-53425266 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 424-535
Cow position: chr1:75382959-75383066 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 424-535
Cow position: chr1:85550100-85549989 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-544
Cow position: chr1:8347101-8347221 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-552
Cow position: chr1:54156756-54156629 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 424-552
Cow position: chr1:67529033-67529161 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-552
Cow position: chr1:75141975-75142103 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-553
Cow position: chr1:56477570-56477700 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 124, 0

Conread position: 425-527
Cow position: chr1:34771524-34771422 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr1:8287651-8287548 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr1:56225764-56225867 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr1:71665953-71665850 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr1:72068856-72068753 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr1:82880625-82880726 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 425-529
Cow position: chr1:16962031-16961927 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 425-529
Cow position: chr1:97231939-97232043 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr1:43312052-43311942 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr1:61542939-61542830 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 425-535
Cow position: chr1:91811761-91811866 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 425-552
Cow position: chr1:15547451-15547576 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 426-527
Cow position: chr1:53308409-53308311 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 426-528
Cow position: chr1:4032612-4032714 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 426-528
Cow position: chr1:19515639-19515537 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 426-528
Cow position: chr1:44506951-44507055 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 91
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 426-528
Cow position: chr1:69264790-69264890 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 426-528
Cow position: chr1:77739702-77739804 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 426-528
Cow position: chr1:98636685-98636787 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 426-535
Cow position: chr1:20667762-20667653 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 427-528
Cow position: chr1:7908018-7908119 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 427-528
Cow position: chr1:22823886-22823987 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 427-535
Cow position: chr1:37309538-37309430 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 428-529
Cow position: chr1:26616094-26615991 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 428-535
Cow position: chr1:74081999-74081892 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 428-535
Cow position: chr1:78068087-78067980 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 430-526
Cow position: chr1:6381756-6381852 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 431-535
Cow position: chr1:24561524-24561420 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 431-535
Cow position: chr1:24570962-24570858 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 181-424
Cow position: chr10:890242-890004 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 166
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 102

Conread position: 204-309
Cow position: chr10:39228350-39228241 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 204-423
Cow position: chr10:58259268-58259482 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 149

Conread position: 220-349
Cow position: chr10:52309553-52309428 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 23

Conread position: 220-354
Cow position: chr10:50015805-50015937 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 112, 60

Conread position: 396-529
Cow position: chr10:22480209-22480339 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 399-535
Cow position: chr10:17388763-17388899 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 20, 44

Conread position: 405-529
Cow position: chr10:19549558-19549434 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 409-535
Cow position: chr10:32127696-32127828 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 418-535
Cow position: chr10:31791316-31791200 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 419-526
Cow position: chr10:55382258-55382365 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 420-528
Cow position: chr10:48317002-48316895 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 421-528
Cow position: chr10:35653616-35653723 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 421-528
Cow position: chr10:46493049-46492942 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 422-528
Cow position: chr10:17844713-17844819 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 422-528
Cow position: chr10:47690334-47690440 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr10:55122754-55122859 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 423-529
Cow position: chr10:47182621-47182515 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 423-535
Cow position: chr10:16986279-16986391 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 423-535
Cow position: chr10:37014581-37014693 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 423-535
Cow position: chr10:59839337-59839228 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 423-542
Cow position: chr10:17568154-17568035 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 73

Conread position: 424-527
Cow position: chr10:26209298-26209196 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 424-527
Cow position: chr10:46262136-46262239 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-527
Cow position: chr10:47724895-47724998 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr10:1423779-1423883 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr10:15293214-15293318 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr10:17553132-17553235 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 424-528
Cow position: chr10:33084489-33084388 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 6, 59

Conread position: 424-528
Cow position: chr10:34430277-34430173 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 91
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr10:55396028-55395924 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr10:15868200-15868305 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 93
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr10:63484589-63484693 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 424-529
Cow position: chr10:68829336-68829231 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr10:705047-704936 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr10:4184144-4184255 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr10:18042128-18042239 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr10:31779320-31779209 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-536
Cow position: chr10:9309166-9309282 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 424-552
Cow position: chr10:11463716-11463590 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 424-552
Cow position: chr10:15318833-15318962 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 424-562
Cow position: chr10:40420896-40420759 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 124, 38

Conread position: 425-526
Cow position: chr10:34700580-34700681 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr10:4109538-4109641 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr10:4311122-4311225 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr10:42745867-42745970 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 425-529
Cow position: chr10:19372387-19372283 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr10:15425003-15425109 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 425-535
Cow position: chr10:29349561-29349673 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 425-535
Cow position: chr10:52881669-52881559 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr10:54477052-54477161 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 425-552
Cow position: chr10:20485609-20485483 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 426-530
Cow position: chr10:22981028-22980924 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 426-535
Cow position: chr10:29588889-29588780 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 427-528
Cow position: chr10:24903033-24902932 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 428-528
Cow position: chr10:59151912-59151812 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 428-535
Cow position: chr10:10137817-10137924 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 428-535
Cow position: chr10:23128034-23127927 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 429-528
Cow position: chr10:34660289-34660190 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 429-535
Cow position: chr10:48898619-48898725 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 433-529
Cow position: chr10:16830429-16830333 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 441-528
Cow position: chr10:22660801-22660887 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 204-334
Cow position: chr11:29983410-29983542 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 79

Conread position: 205-377
Cow position: chr11:54219202-54219030 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 141

Conread position: 213-356
Cow position: chr11:26845384-26845527 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 135

Conread position: 220-326
Cow position: chr11:37982370-37982475 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 220-424
Cow position: chr11:36128668-36128452 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 358-544
Cow position: chr11:48063911-48063726 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 18

Conread position: 405-527
Cow position: chr11:71501197-71501074 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 405-528
Cow position: chr11:33526987-33527111 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 405-528
Cow position: chr11:35109603-35109479 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 22, 76

Conread position: 408-528
Cow position: chr11:71168651-71168531 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 411-528
Cow position: chr11:65624850-65624735 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 418-535
Cow position: chr11:53778565-53778682 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 423-522
Cow position: chr11:67804703-67804802 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-529
Cow position: chr11:33348232-33348127 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 423-532
Cow position: chr11:17321601-17321709 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 423-534
Cow position: chr11:6633665-6633775 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 423-535
Cow position: chr11:20602178-20602292 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 99
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 7, 98

Conread position: 423-535
Cow position: chr11:34692807-34692919 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 423-559
Cow position: chr11:13864151-13864012 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 423-580
Cow position: chr11:55203506-55203350 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 135, 126

Conread position: 424-525
Cow position: chr11:35669997-35669896 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-525
Cow position: chr11:37919091-37918990 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-526
Cow position: chr11:29659514-29659616 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr11:6233925-6233821 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr11:27913239-27913343 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr11:30925111-30925215 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr11:38874447-38874343 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr11:39249927-39250031 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr11:39462578-39462682 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr11:48512119-48512222 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 424-528
Cow position: chr11:52983630-52983734 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr11:84385682-84385580 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 424-529
Cow position: chr11:13592690-13592795 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr11:19247244-19247140 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 424-529
Cow position: chr11:49231828-49231933 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr11:62230135-62230240 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-534
Cow position: chr11:71868648-71868538 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr11:13499972-13500081 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 97
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 424-535
Cow position: chr11:36986907-36987015 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 424-535
Cow position: chr11:61958789-61958678 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr11:70978779-70978668 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr11:71935000-71934889 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-552
Cow position: chr11:34106715-34106587 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 425-515
Cow position: chr11:13043190-13043100 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 78
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr11:8988274-8988172 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 425-528
Cow position: chr11:56654511-56654614 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-529
Cow position: chr11:3739909-3740013 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-529
Cow position: chr11:50472273-50472376 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 425-535
Cow position: chr11:18587640-18587530 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr11:29786544-29786433 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 425-535
Cow position: chr11:73512484-73512377 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 426-528
Cow position: chr11:84977402-84977300 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 426-529
Cow position: chr11:2084100-2084203 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 426-529
Cow position: chr11:43914250-43914351 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 426-543
Cow position: chr11:52690563-52690447 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 427-528
Cow position: chr11:41986088-41985987 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 427-535
Cow position: chr11:15373796-15373905 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 427-535
Cow position: chr11:77546373-77546481 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 427-554
Cow position: chr11:34136201-34136325 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 431-563
Cow position: chr11:18608276-18608144 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 433-526
Cow position: chr11:58173589-58173681 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 173-310
Cow position: chr12:25351667-25351534 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 178-307
Cow position: chr12:43551016-43551148 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 37, 19

Conread position: 220-323
Cow position: chr12:45712825-45712929 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 220-335
Cow position: chr12:34473452-34473570 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 220-422
Cow position: chr12:7515031-7514832 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 110, 60

Conread position: 226-324
Cow position: chr12:44516839-44516938 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 245-424
Cow position: chr12:1767121-1766936 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 38, 122

Conread position: 382-529
Cow position: chr12:6754089-6754235 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 398-528
Cow position: chr12:37993827-37993694 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 401-553
Cow position: chr12:45002159-45002004 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 402-535
Cow position: chr12:36994205-36994071 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 12

Conread position: 405-535
Cow position: chr12:44517822-44517693 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 418-538
Cow position: chr12:23855767-23855884 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 420-529
Cow position: chr12:16056928-16056819 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 423-526
Cow position: chr12:6210225-6210122 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 423-535
Cow position: chr12:6241252-6241364 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-535
Cow position: chr12:8943290-8943179 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 423-535
Cow position: chr12:21780095-21780207 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 423-536
Cow position: chr12:29057320-29057435 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 423-552
Cow position: chr12:6410802-6410671 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 424-527
Cow position: chr12:18963993-18963891 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 424-528
Cow position: chr12:4719881-4719985 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr12:4793131-4793235 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr12:6188180-6188076 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr12:9914723-9914827 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr12:26750019-26749914 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 424-528
Cow position: chr12:27563443-27563339 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr12:35368576-35368680 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 424-530
Cow position: chr12:39675563-39675457 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr12:3880046-3879935 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr12:4135011-4135122 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr12:25452513-25452402 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr12:31517237-31517126 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr12:45168085-45167974 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-552
Cow position: chr12:35771087-35770959 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-553
Cow position: chr12:30662016-30661886 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 121, 0

Conread position: 425-528
Cow position: chr12:19664595-19664494 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 425-528
Cow position: chr12:42181194-42181091 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr12:44595875-44595772 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-529
Cow position: chr12:7000668-7000565 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 425-529
Cow position: chr12:7977975-7978076 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 425-529
Cow position: chr12:9894717-9894821 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-529
Cow position: chr12:10942222-10942326 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr12:4797235-4797345 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr12:7110132-7110242 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr12:11587709-11587819 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 425-539
Cow position: chr12:22515797-22515683 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 89
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 427-529
Cow position: chr12:15163077-15163178 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 427-535
Cow position: chr12:18943721-18943613 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 428-528
Cow position: chr12:7457605-7457507 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 429-528
Cow position: chr12:3675588-3675489 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 142-424
Cow position: chr13:15808406-15808687 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 200
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 138, 15

Conread position: 220-354
Cow position: chr13:54689315-54689442 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 220-374
Cow position: chr13:15104805-15104957 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 133, 60

Conread position: 220-422
Cow position: chr13:6266974-6267170 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 62, 0

Conread position: 405-528
Cow position: chr13:42200652-42200528 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 405-535
Cow position: chr13:20520093-20519963 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 16

Conread position: 418-528
Cow position: chr13:55765159-55765271 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 421-528
Cow position: chr13:14771468-14771361 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 421-528
Cow position: chr13:18517061-18516955 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 422-526
Cow position: chr13:51116009-51116113 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 422-528
Cow position: chr13:18166747-18166641 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 422-528
Cow position: chr13:52929726-52929620 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 422-535
Cow position: chr13:7076270-7076159 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 423-528
Cow position: chr13:37592932-37593038 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 93
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 423-529
Cow position: chr13:8652428-8652534 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-529
Cow position: chr13:9117556-9117662 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 423-529
Cow position: chr13:41157419-41157313 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 423-535
Cow position: chr13:6183406-6183518 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 423-539
Cow position: chr13:29831418-29831532 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 97, 32

Conread position: 424-527
Cow position: chr13:15997047-15996944 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 90
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr13:28552601-28552497 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr13:40491228-40491124 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr13:46736228-46736124 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-534
Cow position: chr13:34941635-34941746 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 109

Conread position: 424-535
Cow position: chr13:1147138-1147248 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 424-535
Cow position: chr13:8524605-8524716 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr13:15739702-15739595 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 424-535
Cow position: chr13:52055579-52055690 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr13:62008120-62008009 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr13:11643951-11643848 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr13:17837962-17837859 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr13:33054361-33054464 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr13:36771412-36771512 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 425-528
Cow position: chr13:50713223-50713119 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 425-535
Cow position: chr13:1042957-1043067 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-542
Cow position: chr13:61166439-61166554 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 425-567
Cow position: chr13:37640600-37640458 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 123, 24

Conread position: 426-528
Cow position: chr13:17563751-17563648 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 426-529
Cow position: chr13:52640937-52641040 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 426-535
Cow position: chr13:6974172-6974063 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 95
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 427-528
Cow position: chr13:10924911-10925012 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 427-528
Cow position: chr13:25579180-25579281 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 427-535
Cow position: chr13:19750725-19750617 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 78, 84

Conread position: 427-564
Cow position: chr13:60393794-60393657 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 428-528
Cow position: chr13:25926799-25926699 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 428-528
Cow position: chr13:32017503-32017603 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 428-535
Cow position: chr13:24110489-24110382 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 430-528
Cow position: chr13:15143836-15143933 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 430-529
Cow position: chr13:49356042-49356141 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 430-552
Cow position: chr13:16908224-16908101 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 118, 0

Conread position: 200-320
Cow position: chr14:5034042-5033926 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 203-339
Cow position: chr14:17238132-17238269 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 79

Conread position: 207-342
Cow position: chr14:8749881-8750017 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 75

Conread position: 209-323
Cow position: chr14:49825629-49825745 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 71, 9

Conread position: 211-354
Cow position: chr14:34331507-34331368 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 84

Conread position: 220-335
Cow position: chr14:23038884-23038768 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 220-380
Cow position: chr14:20385196-20385040 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 23

Conread position: 227-338
Cow position: chr14:4209312-4209428 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 418-527
Cow position: chr14:41479586-41479695 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 418-535
Cow position: chr14:18309231-18309348 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 422-528
Cow position: chr14:28924241-28924134 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 423-525
Cow position: chr14:19863362-19863464 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 83
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr14:33830372-33830268 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 423-528
Cow position: chr14:40754176-40754281 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 423-529
Cow position: chr14:8923513-8923619 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-535
Cow position: chr14:12954314-12954426 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-519
Cow position: chr14:18717343-18717248 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-525
Cow position: chr14:28115117-28115219 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 424-526
Cow position: chr14:37883846-37883948 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-527
Cow position: chr14:22966825-22966722 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr14:3665880-3665771 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 424-528
Cow position: chr14:7036287-7036391 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr14:12035477-12035376 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 424-528
Cow position: chr14:19129576-19129472 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr14:46062012-46061908 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr14:8786480-8786582 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 424-529
Cow position: chr14:29965089-29964985 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 424-529
Cow position: chr14:42419203-42419308 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-534
Cow position: chr14:19618681-19618791 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr14:25403865-25403976 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr14:39618306-39618417 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-552
Cow position: chr14:10609750-10609621 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 113, 123

Conread position: 424-552
Cow position: chr14:42437093-42436967 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 425-522
Cow position: chr14:18763369-18763466 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr14:33309435-33309537 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 425-528
Cow position: chr14:36442949-36443052 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-534
Cow position: chr14:24712555-24712664 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr14:22997508-22997618 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 87
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-552
Cow position: chr14:38144038-38144165 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 426-528
Cow position: chr14:25824763-25824661 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 83
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 426-528
Cow position: chr14:33247361-33247463 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 426-528
Cow position: chr14:46998107-46998005 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 426-529
Cow position: chr14:45045666-45045562 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 429-535
Cow position: chr14:6541659-6541765 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 431-553
Cow position: chr14:22941665-22941788 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 117, 0

Conread position: 204-310
Cow position: chr15:23719625-23719518 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 204-388
Cow position: chr15:10737904-10737716 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 11, 164

Conread position: 220-307
Cow position: chr15:16911905-16911817 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 77
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 60, 0

Conread position: 405-535
Cow position: chr15:14176363-14176493 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 420-526
Cow position: chr15:21941725-21941830 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 420-528
Cow position: chr15:20534329-20534437 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 421-535
Cow position: chr15:39316722-39316836 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr15:1297857-1297752 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr15:9497381-9497487 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 423-528
Cow position: chr15:18671338-18671443 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr15:39405862-39405757 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 75

Conread position: 423-529
Cow position: chr15:2953016-2953122 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 423-529
Cow position: chr15:29541995-29541889 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 423-529
Cow position: chr15:39619259-39619154 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 17, 0

Conread position: 423-535
Cow position: chr15:2141185-2141297 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 88
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 423-535
Cow position: chr15:5158492-5158380 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 423-535
Cow position: chr15:14261141-14261251 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 423-535
Cow position: chr15:24629247-24629359 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-535
Cow position: chr15:43626587-43626475 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 423-536
Cow position: chr15:17196266-17196153 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 423-536
Cow position: chr15:39286291-39286404 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 423-543
Cow position: chr15:4460930-4461049 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 423-552
Cow position: chr15:11995909-11996038 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-526
Cow position: chr15:21821807-21821909 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr15:225687-225791 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 92
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr15:794904-795008 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr15:10660437-10660542 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 424-528
Cow position: chr15:20459188-20459295 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 424-528
Cow position: chr15:20856359-20856463 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr15:21893895-21893792 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 424-528
Cow position: chr15:36388408-36388304 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr15:38846018-38845914 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr15:50322711-50322607 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 91
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr15:26573496-26573391 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr15:44658476-44658372 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 424-529
Cow position: chr15:49491761-49491656 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-531
Cow position: chr15:41527859-41527962 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 54, 0

Conread position: 424-535
Cow position: chr15:23768140-23768251 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-536
Cow position: chr15:9107151-9107039 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr15:23719367-23719470 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr15:27900395-27900497 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 425-529
Cow position: chr15:17664128-17664232 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-529
Cow position: chr15:24797694-24797798 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-529
Cow position: chr15:47843135-47843239 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-551
Cow position: chr15:35945645-35945518 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 426-528
Cow position: chr15:6037340-6037441 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 426-528
Cow position: chr15:35417510-35417612 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 427-528
Cow position: chr15:12870750-12870851 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 427-535
Cow position: chr15:31928782-31928890 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 428-528
Cow position: chr15:36793381-36793481 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 428-535
Cow position: chr15:5726438-5726331 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 430-528
Cow position: chr15:15154411-15154313 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 81
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 430-529
Cow position: chr15:42353497-42353398 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 432-543
Cow position: chr15:18776642-18776753 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 159-354
Cow position: chr16:54084337-54084139 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 121, 41

Conread position: 201-354
Cow position: chr16:52363917-52363768 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 16

Conread position: 204-299
Cow position: chr16:11083208-11083111 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 204-331
Cow position: chr16:13611227-13611351 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 23

Conread position: 204-335
Cow position: chr16:11922794-11922923 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 220-340
Cow position: chr16:7550206-7550085 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 220-424
Cow position: chr16:43675138-43674940 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 226-322
Cow position: chr16:16945067-16945164 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 411-535
Cow position: chr16:6310741-6310617 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 411-552
Cow position: chr16:42433151-42433010 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 412-528
Cow position: chr16:24403468-24403352 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 62

Conread position: 423-528
Cow position: chr16:30359091-30358986 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr16:43308588-43308484 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 423-528
Cow position: chr16:47852621-47852516 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 423-535
Cow position: chr16:13712961-13712849 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-526
Cow position: chr16:23955859-23955757 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 424-526
Cow position: chr16:25380523-25380420 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 90
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 424-528
Cow position: chr16:3246232-3246128 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr16:8323009-8322905 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr16:9500495-9500599 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr16:21317620-21317516 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr16:27160891-27160787 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr16:32327631-32327735 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr16:47854914-47855016 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 424-529
Cow position: chr16:28444517-28444412 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr16:48086895-48086790 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-532
Cow position: chr16:8076529-8076423 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 424-535
Cow position: chr16:7549941-7550051 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 424-535
Cow position: chr16:11359124-11359235 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr16:15960317-15960206 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr16:41530327-41530216 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-552
Cow position: chr16:56665548-56665676 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 425-518
Cow position: chr16:24672383-24672291 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 83
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 425-527
Cow position: chr16:2223423-2223321 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr16:33595963-33595860 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr16:36121009-36120906 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr16:49169407-49169304 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr16:53509010-53508908 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 425-535
Cow position: chr16:11102847-11102737 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr16:22804623-22804514 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 425-536
Cow position: chr16:39646519-39646632 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 426-529
Cow position: chr16:12633859-12633962 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 426-529
Cow position: chr16:32142065-32142168 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 426-529
Cow position: chr16:40446237-40446339 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 426-535
Cow position: chr16:820225-820334 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 426-535
Cow position: chr16:39165215-39165323 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 427-527
Cow position: chr16:13414690-13414590 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 427-528
Cow position: chr16:56082389-56082288 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 427-534
Cow position: chr16:39202116-39202222 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 428-535
Cow position: chr16:12501183-12501077 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 430-527
Cow position: chr16:51697062-51697161 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 430-528
Cow position: chr16:7665616-7665714 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 433-527
Cow position: chr16:23472731-23472825 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 159-301
Cow position: chr17:21718697-21718842 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 13, 50

Conread position: 203-310
Cow position: chr17:12319468-12319363 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 203-340
Cow position: chr17:42697581-42697442 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 79

Conread position: 203-352
Cow position: chr17:42744747-42744597 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 19, 81

Conread position: 206-300
Cow position: chr17:26231212-26231119 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 74, 11

Conread position: 207-419
Cow position: chr17:1875720-1875933 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 7

Conread position: 213-310
Cow position: chr17:3782426-3782330 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 376-535
Cow position: chr17:24862418-24862582 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 11

Conread position: 398-523
Cow position: chr17:23702614-23702735 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 403-528
Cow position: chr17:40355251-40355375 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 412-535
Cow position: chr17:4833528-4833404 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 417-528
Cow position: chr17:25930533-25930422 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 417-529
Cow position: chr17:26730605-26730493 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 418-528
Cow position: chr17:21738868-21738757 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 419-518
Cow position: chr17:18860713-18860614 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 419-528
Cow position: chr17:25169086-25169195 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 421-528
Cow position: chr17:13638635-13638741 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 5, 84

Conread position: 421-529
Cow position: chr17:7571113-7571221 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 421-535
Cow position: chr17:7590453-7590339 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 423-527
Cow position: chr17:1113900-1114004 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr17:9935795-9935689 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 423-528
Cow position: chr17:11832103-11831998 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr17:25077754-25077650 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 423-528
Cow position: chr17:26072749-26072644 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr17:31856685-31856790 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 423-529
Cow position: chr17:12342469-12342363 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 423-529
Cow position: chr17:15354943-15355049 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 423-535
Cow position: chr17:949987-950095 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 423-535
Cow position: chr17:21922622-21922510 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 423-552
Cow position: chr17:21788647-21788518 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 423-588
Cow position: chr17:14762110-14761945 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 107, 142

Conread position: 424-525
Cow position: chr17:26230967-26231068 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr17:2275483-2275587 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr17:5013062-5012959 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 424-528
Cow position: chr17:7851100-7851204 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr17:23798294-23798398 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr17:32265477-32265373 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr17:24559303-24559408 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr17:7142874-7142985 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr17:11215217-11215108 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 65

Conread position: 424-535
Cow position: chr17:20884536-20884647 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr17:25032469-25032358 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr17:25126363-25126474 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-542
Cow position: chr17:14033627-14033511 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 424-543
Cow position: chr17:5011851-5011970 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 57, 32

Conread position: 425-528
Cow position: chr17:20874412-20874513 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 425-528
Cow position: chr17:28814479-28814376 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 425-529
Cow position: chr17:25342727-25342623 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr17:20848537-20848646 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 425-535
Cow position: chr17:30529531-30529421 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 426-528
Cow position: chr17:20905084-20904982 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 83
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 426-528
Cow position: chr17:40288985-40288883 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 426-528
Cow position: chr17:40741663-40741769 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 426-535
Cow position: chr17:27203031-27202922 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 94
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 427-528
Cow position: chr17:43957676-43957777 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 427-529
Cow position: chr17:7803159-7803057 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 83
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 427-535
Cow position: chr17:37129215-37129323 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 427-536
Cow position: chr17:22246005-22246114 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 428-528
Cow position: chr17:15684526-15684627 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 428-535
Cow position: chr17:37816176-37816069 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 433-535
Cow position: chr17:37430483-37430381 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 152-339
Cow position: chr18:40475957-40476141 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 131, 25

Conread position: 152-371
Cow position: chr18:14523743-14523525 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 18, 52

Conread position: 220-416
Cow position: chr18:43020170-43020364 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 133

Conread position: 220-474
Cow position: chr18:4872288-4872044 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 195, 60

Conread position: 222-357
Cow position: chr18:39084394-39084256 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 382-529
Cow position: chr18:21708233-21708083 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 39

Conread position: 398-518
Cow position: chr18:1607170-1607287 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 409-528
Cow position: chr18:40047574-40047457 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 418-535
Cow position: chr18:43555591-43555474 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 419-528
Cow position: chr18:16997188-16997297 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 419-529
Cow position: chr18:2774206-2774094 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 422-526
Cow position: chr18:12584903-12584798 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 6

Conread position: 422-528
Cow position: chr18:4182250-4182144 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-527
Cow position: chr18:14586532-14586428 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr18:2619275-2619170 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr18:5078835-5078730 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr18:40759145-40759250 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr18:51643427-51643322 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 423-552
Cow position: chr18:5701187-5701315 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 424-521
Cow position: chr18:20175255-20175158 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-525
Cow position: chr18:7109069-7109170 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-527
Cow position: chr18:3211817-3211920 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 424-527
Cow position: chr18:39662718-39662821 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-527
Cow position: chr18:44908992-44909095 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr18:39623739-39623844 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr18:11754072-11754180 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 424-535
Cow position: chr18:46072402-46072513 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr18:47693005-47693116 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr18:50359270-50359382 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 6, 0

Conread position: 424-553
Cow position: chr18:56165921-56166050 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 124, 52

Conread position: 425-522
Cow position: chr18:47416942-47417039 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr18:56159402-56159504 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 425-529
Cow position: chr18:52251917-52251813 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr18:19896511-19896401 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr18:20174189-20174079 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 95
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr18:22214428-22214538 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 426-523
Cow position: chr18:2864049-2863952 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 426-535
Cow position: chr18:19883473-19883583 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 426-552
Cow position: chr18:4556225-4556102 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 427-528
Cow position: chr18:18369417-18369318 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 427-528
Cow position: chr18:47525350-47525451 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 427-528
Cow position: chr18:47565769-47565867 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 427-528
Cow position: chr18:50974352-50974251 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 427-535
Cow position: chr18:22170560-22170668 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 427-552
Cow position: chr18:51192798-51192673 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 428-535
Cow position: chr18:14888236-14888341 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 428-535
Cow position: chr18:37023607-37023500 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 46

Conread position: 430-539
Cow position: chr18:27388529-27388640 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 431-528
Cow position: chr18:5632214-5632311 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 433-528
Cow position: chr18:42427568-42427663 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 171-310
Cow position: chr19:42763440-42763302 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 109, 45

Conread position: 204-424
Cow position: chr19:19919194-19919407 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 30

Conread position: 220-422
Cow position: chr19:18344265-18344487 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 220-424
Cow position: chr19:33931594-33931804 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 143

Conread position: 394-528
Cow position: chr19:15362769-15362633 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 21

Conread position: 405-529
Cow position: chr19:30007133-30007258 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 105
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 406-531
Cow position: chr19:32539727-32539602 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 416-528
Cow position: chr19:39781474-39781585 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 420-528
Cow position: chr19:53378658-53378767 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 421-528
Cow position: chr19:39649118-39649011 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 73

Conread position: 421-532
Cow position: chr19:39613207-39613096 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 422-535
Cow position: chr19:52185807-52185693 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 423-515
Cow position: chr19:43647373-43647465 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 423-527
Cow position: chr19:41024184-41024288 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr19:10081035-10081140 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr19:33237134-33237239 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 423-529
Cow position: chr19:14253592-14253698 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 423-535
Cow position: chr19:43372999-43373111 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 423-535
Cow position: chr19:47986819-47986931 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-536
Cow position: chr19:7543374-7543486 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 110, 0

Conread position: 424-527
Cow position: chr19:34819227-34819122 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 424-528
Cow position: chr19:2221114-2221010 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr19:11424354-11424252 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 424-528
Cow position: chr19:17354819-17354923 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr19:34166332-34166432 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 424-528
Cow position: chr19:42235989-42236093 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr19:42694957-42695061 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr19:2068228-2068333 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr19:6477671-6477782 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr19:31595262-31595373 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr19:4800704-4800807 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr19:12698282-12698391 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 425-535
Cow position: chr19:21176779-21176669 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr19:23304526-23304418 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 426-528
Cow position: chr19:25526247-25526349 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 426-528
Cow position: chr19:36845213-36845315 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 427-528
Cow position: chr19:20093030-20092930 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 429-528
Cow position: chr19:6344040-6344138 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 429-528
Cow position: chr19:7675200-7675299 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 429-528
Cow position: chr19:47859349-47859250 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 430-528
Cow position: chr19:54915725-54915627 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 203-324
Cow position: chr2:9687309-9687431 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 204-373
Cow position: chr2:3740596-3740765 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 141, 76

Conread position: 221-424
Cow position: chr2:47073439-47073253 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 226-354
Cow position: chr2:44216647-44216519 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 228-354
Cow position: chr2:40803213-40803085 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 102, 56

Conread position: 400-529
Cow position: chr2:16487936-16488068 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 405-528
Cow position: chr2:13369608-13369731 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 405-528
Cow position: chr2:54967962-54968085 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 407-528
Cow position: chr2:38837561-38837440 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 15

Conread position: 410-528
Cow position: chr2:6038973-6039090 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 417-534
Cow position: chr2:49428347-49428463 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 109, 0

Conread position: 418-526
Cow position: chr2:70896000-70896109 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 418-535
Cow position: chr2:44081403-44081520 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 96

Conread position: 419-552
Cow position: chr2:7524164-7524031 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 420-528
Cow position: chr2:15219082-15219190 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 422-528
Cow position: chr2:69419614-69419508 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 422-535
Cow position: chr2:45510589-45510476 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 65

Conread position: 422-535
Cow position: chr2:84970743-84970629 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 423-527
Cow position: chr2:41145286-41145391 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 423-528
Cow position: chr2:58135420-58135315 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 21

Conread position: 423-528
Cow position: chr2:69109377-69109272 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr2:70945376-70945481 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 423-529
Cow position: chr2:76313896-76313790 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 423-536
Cow position: chr2:12988563-12988677 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 109

Conread position: 423-552
Cow position: chr2:13580208-13580337 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-526
Cow position: chr2:41007568-41007466 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-526
Cow position: chr2:43608193-43608089 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 424-528
Cow position: chr2:13062245-13062141 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr2:15348366-15348470 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr2:19137917-19137813 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr2:32988538-32988644 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 424-528
Cow position: chr2:45623987-45624091 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr2:47065082-47065184 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 424-528
Cow position: chr2:48130592-48130698 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 424-528
Cow position: chr2:71486751-71486855 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr2:76861483-76861379 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr2:14826249-14826354 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr2:19212083-19211977 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 424-529
Cow position: chr2:32264419-32264314 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr2:76562079-76562184 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr2:69823562-69823674 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 424-535
Cow position: chr2:80963673-80963566 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 424-543
Cow position: chr2:32048453-32048572 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 424-552
Cow position: chr2:40728323-40728451 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-562
Cow position: chr2:39815311-39815171 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 132, 0

Conread position: 425-527
Cow position: chr2:42183346-42183448 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr2:13013064-13013167 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr2:20900488-20900386 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 425-528
Cow position: chr2:49717114-49717011 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-552
Cow position: chr2:22113724-22113595 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 40, 112

Conread position: 426-528
Cow position: chr2:24218241-24218139 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 426-535
Cow position: chr2:64773360-64773469 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 427-528
Cow position: chr2:5130478-5130378 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 427-528
Cow position: chr2:26851141-26851240 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 428-535
Cow position: chr2:30954619-30954513 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 428-570
Cow position: chr2:57802512-57802368 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 102, 107

Conread position: 430-528
Cow position: chr2:59397074-59396977 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 198-354
Cow position: chr20:33438700-33438853 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 201-354
Cow position: chr20:30027631-30027475 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 205-354
Cow position: chr20:21715039-21714895 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 209-328
Cow position: chr20:32627295-32627173 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 405-535
Cow position: chr20:39962571-39962701 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 409-528
Cow position: chr20:6054509-6054390 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 422-528
Cow position: chr20:23870805-23870700 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 423-525
Cow position: chr20:11482120-11482018 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr20:17251732-17251836 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 94
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 423-528
Cow position: chr20:36040488-36040594 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 423-535
Cow position: chr20:34777194-34777306 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 424-525
Cow position: chr20:4002112-4002211 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 424-528
Cow position: chr20:3141589-3141693 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr20:12126289-12126185 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr20:20967336-20967440 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr20:4945236-4945134 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 424-529
Cow position: chr20:23780911-23781016 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr20:5703486-5703598 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 424-535
Cow position: chr20:10246038-10245927 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr20:23506456-23506344 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 424-535
Cow position: chr20:24000782-24000670 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 424-535
Cow position: chr20:40781976-40782087 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-538
Cow position: chr20:35208191-35208080 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 425-528
Cow position: chr20:5950626-5950524 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 425-528
Cow position: chr20:11008185-11008289 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 425-529
Cow position: chr20:6248585-6248481 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr20:13652351-13652241 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr20:34001373-34001264 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 426-528
Cow position: chr20:16492089-16492192 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 426-528
Cow position: chr20:29845068-29845170 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 426-535
Cow position: chr20:10772223-10772331 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 426-538
Cow position: chr20:6890731-6890842 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 427-531
Cow position: chr20:31799185-31799081 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 427-535
Cow position: chr20:33438962-33438854 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 86
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 428-529
Cow position: chr20:34202653-34202755 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 429-552
Cow position: chr20:7709760-7709638 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 181-395
Cow position: chr21:5149589-5149370 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 40, 177

Conread position: 213-341
Cow position: chr21:8626098-8625970 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 220-352
Cow position: chr21:12200409-12200279 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 123

Conread position: 419-528
Cow position: chr21:30607056-30606946 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 419-535
Cow position: chr21:40432476-40432592 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 421-523
Cow position: chr21:24642554-24642655 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 421-529
Cow position: chr21:25628877-25628769 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 422-528
Cow position: chr21:20152990-20153096 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 422-528
Cow position: chr21:45473725-45473618 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 423-527
Cow position: chr21:34475097-34475201 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr21:10004850-10004746 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 423-529
Cow position: chr21:41107737-41107627 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 423-533
Cow position: chr21:44724333-44724223 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 87
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-535
Cow position: chr21:7768473-7768585 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-522
Cow position: chr21:28919487-28919389 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 81
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-526
Cow position: chr21:7377890-7377788 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-527
Cow position: chr21:3585332-3585229 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-527
Cow position: chr21:26244950-26245053 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-527
Cow position: chr21:30231658-30231555 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr21:4281839-4281735 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr21:19258858-19258958 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 424-528
Cow position: chr21:37838030-37837926 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr21:41597847-41597951 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr21:42209593-42209489 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr21:36763098-36763208 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 424-535
Cow position: chr21:42414062-42413950 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 424-543
Cow position: chr21:10001111-10001230 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-543
Cow position: chr21:36789831-36789951 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 425-527
Cow position: chr21:41621162-41621264 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr21:712979-713083 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 425-528
Cow position: chr21:1764830-1764730 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 425-528
Cow position: chr21:13365380-13365482 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 425-557
Cow position: chr21:41878508-41878636 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 426-528
Cow position: chr21:10538217-10538115 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 426-528
Cow position: chr21:20160714-20160816 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 426-529
Cow position: chr21:14452272-14452375 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 426-530
Cow position: chr21:41610205-41610309 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 426-534
Cow position: chr21:868886-868778 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 426-535
Cow position: chr21:28924147-28924256 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 426-535
Cow position: chr21:34390937-34390828 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 426-552
Cow position: chr21:9416288-9416415 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 426-553
Cow position: chr21:29978722-29978594 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 97
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 122, 0

Conread position: 427-526
Cow position: chr21:15584380-15584281 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 427-528
Cow position: chr21:13163898-13163999 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 428-529
Cow position: chr21:33759-33860 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 431-528
Cow position: chr21:13225758-13225855 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 435-535
Cow position: chr21:32339693-32339593 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 180-330
Cow position: chr22:10324137-10323989 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 146, 29

Conread position: 199-341
Cow position: chr22:23182241-23182380 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 81, 18

Conread position: 200-310
Cow position: chr22:27643966-27643855 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 15, 82

Conread position: 220-328
Cow position: chr22:13841364-13841253 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 220-378
Cow position: chr22:3965428-3965269 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 57, 143

Conread position: 220-423
Cow position: chr22:32895497-32895280 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 60, 18

Conread position: 220-424
Cow position: chr22:1602517-1602307 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 63, 137

Conread position: 220-424
Cow position: chr22:6326719-6326506 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 402-525
Cow position: chr22:11352506-11352382 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 405-528
Cow position: chr22:23398453-23398331 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 418-522
Cow position: chr22:16806558-16806662 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 418-535
Cow position: chr22:22155567-22155685 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 418-552
Cow position: chr22:47555814-47555945 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 421-527
Cow position: chr22:4156851-4156745 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 421-528
Cow position: chr22:3301373-3301266 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 421-528
Cow position: chr22:12829646-12829536 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 94
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 421-528
Cow position: chr22:23857013-23857119 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 422-529
Cow position: chr22:16044450-16044342 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 93
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 422-535
Cow position: chr22:10553718-10553605 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 423-527
Cow position: chr22:10752574-10752470 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr22:12188512-12188408 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 423-529
Cow position: chr22:21304272-21304164 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 423-529
Cow position: chr22:24611124-24611020 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 423-531
Cow position: chr22:28058083-28057974 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 423-535
Cow position: chr22:7832386-7832274 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-515
Cow position: chr22:5837239-5837330 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 78
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-525
Cow position: chr22:12892397-12892296 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-526
Cow position: chr22:15025141-15025039 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 83
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-527
Cow position: chr22:10609327-10609430 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-527
Cow position: chr22:25943444-25943547 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-527
Cow position: chr22:44180562-44180665 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr22:534468-534572 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr22:8733369-8733264 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 424-528
Cow position: chr22:23372895-23372791 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr22:28665252-28665356 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr22:28704153-28704257 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr22:29344848-29344951 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 424-528
Cow position: chr22:33448111-33448008 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 424-528
Cow position: chr22:34712695-34712799 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr22:4657074-4656969 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr22:5290818-5290924 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 424-529
Cow position: chr22:16533043-16533148 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr22:30643165-30643060 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr22:34398487-34398382 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr22:2502795-2502905 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 424-535
Cow position: chr22:3965155-3965266 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr22:23176472-23176361 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 424-552
Cow position: chr22:11344479-11344607 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-525
Cow position: chr22:6097047-6096947 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr22:6754297-6754193 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 425-528
Cow position: chr22:37324514-37324615 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 425-529
Cow position: chr22:16724717-16724613 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr22:47562673-47562785 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 426-521
Cow position: chr22:34726638-34726734 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 426-526
Cow position: chr22:11453712-11453813 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 426-528
Cow position: chr22:11130841-11130943 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 426-528
Cow position: chr22:24032244-24032142 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 426-529
Cow position: chr22:16265650-16265754 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 426-529
Cow position: chr22:27835506-27835607 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 426-535
Cow position: chr22:12968098-12967989 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 427-528
Cow position: chr22:12389071-12389172 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 427-528
Cow position: chr22:26339726-26339827 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 427-529
Cow position: chr22:39446264-39446365 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 427-535
Cow position: chr22:13866636-13866745 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 427-535
Cow position: chr22:28290090-28290198 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 428-528
Cow position: chr22:24223043-24223142 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 428-528
Cow position: chr22:29842731-29842631 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 428-529
Cow position: chr22:40387125-40387226 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 429-528
Cow position: chr22:28120694-28120797 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 431-528
Cow position: chr22:9372497-9372594 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 195-419
Cow position: chr23:31299462-31299247 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 220-339
Cow position: chr23:19274294-19274171 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 226-423
Cow position: chr23:14739702-14739517 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 389-535
Cow position: chr23:1936703-1936557 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 418-535
Cow position: chr23:4562854-4562971 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 418-535
Cow position: chr23:19371107-19370989 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 422-528
Cow position: chr23:21336511-21336405 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 422-552
Cow position: chr23:4972739-4972868 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 423-520
Cow position: chr23:57190-57093 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 423-535
Cow position: chr23:1499514-1499403 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 86

Conread position: 423-535
Cow position: chr23:23409707-23409818 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 96
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 74, 0

Conread position: 424-515
Cow position: chr23:34356616-34356708 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 424-525
Cow position: chr23:37065824-37065925 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-527
Cow position: chr23:25371802-25371904 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 90
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 424-528
Cow position: chr23:1885198-1885094 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr23:3234807-3234703 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr23:7696533-7696638 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 424-528
Cow position: chr23:21309437-21309333 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr23:35247342-35247446 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr23:37996-38107 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 424-529
Cow position: chr23:23904353-23904248 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr23:28945094-28944989 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr23:1398065-1397953 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 424-535
Cow position: chr23:2405873-2405987 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 424-535
Cow position: chr23:3244494-3244383 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr23:3262522-3262412 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 424-535
Cow position: chr23:38455204-38455093 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr23:39780729-39780840 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 424-536
Cow position: chr23:20563672-20563783 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 424-559
Cow position: chr23:27529109-27528974 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr23:13599318-13599419 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 425-529
Cow position: chr23:24984193-24984090 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 425-530
Cow position: chr23:4877336-4877441 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr23:16700066-16699956 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr23:18402314-18402204 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 427-528
Cow position: chr23:4054195-4054296 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 427-528
Cow position: chr23:11129211-11129312 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 428-531
Cow position: chr23:6995004-6994901 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 429-552
Cow position: chr23:4104378-4104498 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 430-535
Cow position: chr23:3835614-3835510 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 432-528
Cow position: chr23:41348641-41348545 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 209-354
Cow position: chr24:28289051-28289193 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 226-342
Cow position: chr24:21736882-21736998 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 100

Conread position: 422-529
Cow position: chr24:20801400-20801293 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr24:29673469-29673574 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 423-535
Cow position: chr24:28690629-28690743 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 18, 73

Conread position: 423-535
Cow position: chr24:33944349-33944460 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 423-552
Cow position: chr24:27290818-27290947 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr24:16895489-16895385 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr24:21894998-21895101 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 424-528
Cow position: chr24:34008625-34008521 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr24:18999995-19000100 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-558
Cow position: chr24:352658-352523 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 112, 80

Conread position: 425-528
Cow position: chr24:34555985-34556088 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr24:28470731-28470621 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 426-521
Cow position: chr24:32054611-32054706 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 426-525
Cow position: chr24:30229423-30229522 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 426-528
Cow position: chr24:39911084-39910981 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 427-527
Cow position: chr24:15347540-15347640 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 427-535
Cow position: chr24:11840138-11840246 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 177-317
Cow position: chr25:13735552-13735692 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 102, 25

Conread position: 200-333
Cow position: chr25:13654110-13653977 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 205-356
Cow position: chr25:8223163-8223007 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 209-340
Cow position: chr25:36017779-36017649 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 84, 53

Conread position: 220-330
Cow position: chr25:14212634-14212743 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 220-367
Cow position: chr25:16000680-16000829 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 68, 139

Conread position: 229-421
Cow position: chr25:22736891-22737080 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 16

Conread position: 404-523
Cow position: chr25:18988339-18988459 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 409-529
Cow position: chr25:17918931-17919049 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 418-535
Cow position: chr25:11956768-11956885 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 419-528
Cow position: chr25:30816854-30816963 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 94
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 419-535
Cow position: chr25:31762643-31762527 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 421-552
Cow position: chr25:4009060-4009191 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr25:10364365-10364260 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 423-552
Cow position: chr25:33555576-33555703 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 424-523
Cow position: chr25:9349311-9349214 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 424-527
Cow position: chr25:17342427-17342531 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 424-528
Cow position: chr25:26160935-26161043 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 424-528
Cow position: chr25:35109299-35109195 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr25:37594376-37594480 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr25:18564457-18564561 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 424-529
Cow position: chr25:33311357-33311251 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 424-535
Cow position: chr25:61620-61731 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr25:1824127-1824016 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-552
Cow position: chr25:40321316-40321190 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 425-528
Cow position: chr25:18905856-18905959 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-529
Cow position: chr25:5846838-5846734 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr25:30656675-30656568 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 426-528
Cow position: chr25:16064864-16064966 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 426-528
Cow position: chr25:16921825-16921723 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 426-528
Cow position: chr25:23817868-23817766 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 427-535
Cow position: chr25:13503406-13503514 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 428-535
Cow position: chr25:9615811-9615918 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 431-552
Cow position: chr25:5807920-5808043 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 179-340
Cow position: chr26:34581062-34580906 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 220-354
Cow position: chr26:19774064-19774198 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 105

Conread position: 220-419
Cow position: chr26:32471496-32471694 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 63, 23

Conread position: 401-527
Cow position: chr26:32655644-32655516 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 26, 91

Conread position: 405-528
Cow position: chr26:8700078-8699954 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 418-528
Cow position: chr26:22249494-22249384 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 87
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 419-528
Cow position: chr26:7224358-7224248 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 423-525
Cow position: chr26:29664171-29664067 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 423-531
Cow position: chr26:6865012-6865120 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 423-535
Cow position: chr26:32836227-32836339 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 423-535
Cow position: chr26:33253329-33253216 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 424-522
Cow position: chr26:14578316-14578414 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr26:10938961-10939065 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr26:10965605-10965501 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr26:23624055-23623950 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr26:25526238-25526343 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr26:8352958-8353069 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 424-539
Cow position: chr26:6794134-6794249 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-521
Cow position: chr26:21992092-21992188 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr26:19459683-19459786 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr26:31633718-31633821 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 425-529
Cow position: chr26:7157616-7157512 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr26:32601341-32601450 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 426-528
Cow position: chr26:12893436-12893334 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 427-540
Cow position: chr26:22603046-22602933 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 103, 107

Conread position: 428-535
Cow position: chr26:3706785-3706894 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 94
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 99, 0

Conread position: 429-578
Cow position: chr26:18876968-18876818 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 94, 111

Conread position: 431-552
Cow position: chr26:34060329-34060450 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 166-354
Cow position: chr27:18923152-18922960 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 35

Conread position: 167-334
Cow position: chr27:1789467-1789302 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 113, 51

Conread position: 176-311
Cow position: chr27:154146-154279 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 104, 25

Conread position: 217-423
Cow position: chr27:20085241-20085446 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 143, 12

Conread position: 220-354
Cow position: chr27:28290604-28290737 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 419-529
Cow position: chr27:1353572-1353462 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 422-529
Cow position: chr27:10653671-10653564 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 423-526
Cow position: chr27:27641027-27641129 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 423-529
Cow position: chr27:15925331-15925225 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 423-529
Cow position: chr27:26437136-26437242 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 423-529
Cow position: chr27:30672573-30672679 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr27:9977669-9977563 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 424-528
Cow position: chr27:15215213-15215110 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 424-528
Cow position: chr27:29319395-29319291 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr27:11435338-11435443 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr27:30455978-30455873 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 426-526
Cow position: chr27:28001830-28001930 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 426-528
Cow position: chr27:26413272-26413374 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 83
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 426-528
Cow position: chr27:29184855-29184957 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 426-535
Cow position: chr27:1290869-1290978 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 426-535
Cow position: chr27:12191497-12191605 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 427-535
Cow position: chr27:17918332-17918440 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 428-535
Cow position: chr27:30908652-30908546 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 430-526
Cow position: chr27:22454797-22454893 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 142-424
Cow position: chr28:3396861-3397133 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 191
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 38

Conread position: 179-424
Cow position: chr28:19025701-19025935 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 165
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 206-391
Cow position: chr28:8147062-8147253 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 15, 176

Conread position: 220-354
Cow position: chr28:19024649-19024522 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 405-528
Cow position: chr28:4765633-4765757 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 101, 19

Conread position: 405-529
Cow position: chr28:8259584-8259710 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 419-528
Cow position: chr28:17680594-17680703 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 419-528
Cow position: chr28:21046604-21046495 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 422-528
Cow position: chr28:3011294-3011189 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 97, 75

Conread position: 423-528
Cow position: chr28:11866689-11866584 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-521
Cow position: chr28:5630075-5630172 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-521
Cow position: chr28:5826927-5827024 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr28:3160976-3160872 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr28:20313254-20313358 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr28:21355209-21355312 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 424-528
Cow position: chr28:21380858-21380962 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr28:4823582-4823686 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 424-529
Cow position: chr28:12672488-12672383 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-534
Cow position: chr28:26922391-26922281 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr28:4881262-4881152 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 424-535
Cow position: chr28:27161349-27161239 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 425-528
Cow position: chr28:3449281-3449384 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 425-529
Cow position: chr28:5792686-5792790 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-529
Cow position: chr28:19564250-19564146 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 426-528
Cow position: chr28:4307920-4307816 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 426-535
Cow position: chr28:3726232-3726121 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 426-552
Cow position: chr28:5144542-5144416 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 427-528
Cow position: chr28:20397390-20397289 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 427-528
Cow position: chr28:26743606-26743707 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 427-529
Cow position: chr28:8347711-8347813 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 83
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 427-552
Cow position: chr28:4643790-4643664 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 119, 0

Conread position: 428-528
Cow position: chr28:17601573-17601473 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 429-543
Cow position: chr28:29434446-29434332 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 430-518
Cow position: chr28:17012311-17012223 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 78
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 430-528
Cow position: chr28:10615963-10615865 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 200-315
Cow position: chr29:35832974-35832858 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 18

Conread position: 205-424
Cow position: chr29:20903018-20903227 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 78

Conread position: 207-296
Cow position: chr29:2720849-2720939 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 209-332
Cow position: chr29:2523388-2523264 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 401-552
Cow position: chr29:40299073-40298922 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 12

Conread position: 417-527
Cow position: chr29:5788992-5789101 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 418-526
Cow position: chr29:13639403-13639294 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 421-529
Cow position: chr29:5046620-5046728 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 423-525
Cow position: chr29:6286192-6286090 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 83
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-527
Cow position: chr29:5210461-5210564 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 423-528
Cow position: chr29:5520516-5520411 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-518
Cow position: chr29:2071602-2071507 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 424-523
Cow position: chr29:8686300-8686399 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-527
Cow position: chr29:17297106-17297209 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr29:13867240-13867136 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr29:22936242-22936344 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 424-529
Cow position: chr29:17409305-17409410 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr29:35292062-35292168 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 424-529
Cow position: chr29:38858244-38858138 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 424-529
Cow position: chr29:41530820-41530925 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr29:31981801-31981912 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 426-528
Cow position: chr29:11053887-11053786 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 426-535
Cow position: chr29:868747-868856 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 426-551
Cow position: chr29:23813067-23812942 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 427-535
Cow position: chr29:24188092-24187984 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 428-528
Cow position: chr29:4423465-4423365 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 434-528
Cow position: chr29:3292928-3293022 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 79
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 138-354
Cow position: chr3:36461431-36461225 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 193, 39

Conread position: 181-356
Cow position: chr3:49232095-49231917 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 12, 155

Conread position: 195-424
Cow position: chr3:27670670-27670454 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 22, 87

Conread position: 203-399
Cow position: chr3:34392038-34392234 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 157, 77

Conread position: 204-338
Cow position: chr3:75151202-75151333 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 205-338
Cow position: chr3:62622972-62623102 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 64, 9

Conread position: 209-308
Cow position: chr3:25702150-25702250 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 220-336
Cow position: chr3:43863545-43863661 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 60, 26

Conread position: 222-348
Cow position: chr3:61169978-61169855 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 119, 60

Conread position: 404-539
Cow position: chr3:81359179-81359044 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 405-528
Cow position: chr3:75238386-75238509 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 405-535
Cow position: chr3:79292758-79292887 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 418-528
Cow position: chr3:73708989-73709099 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 419-528
Cow position: chr3:27976582-27976472 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 421-528
Cow position: chr3:57877510-57877618 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 423-528
Cow position: chr3:56430-56325 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 66

Conread position: 423-528
Cow position: chr3:37041367-37041471 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 423-528
Cow position: chr3:64373210-64373104 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 423-528
Cow position: chr3:65019918-65019813 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr3:67520222-67520114 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 423-535
Cow position: chr3:12711968-12711856 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-539
Cow position: chr3:45222206-45222088 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 424-523
Cow position: chr3:43727026-43727126 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 424-523
Cow position: chr3:55819707-55819805 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 424-525
Cow position: chr3:74900692-74900591 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 90
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 424-526
Cow position: chr3:22871895-22871793 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-526
Cow position: chr3:53270778-53270880 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr3:5097155-5097259 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr3:18459579-18459476 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 424-528
Cow position: chr3:23444940-23444836 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr3:55085223-55085117 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 424-529
Cow position: chr3:14546950-14547054 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 424-529
Cow position: chr3:18059650-18059756 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 424-529
Cow position: chr3:40213085-40212981 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 424-529
Cow position: chr3:51033314-51033419 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr3:57760446-57760551 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr3:70334747-70334642 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr3:210267-210378 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr3:2637874-2637985 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr3:24935313-24935424 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr3:56949140-56949029 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr3:71423603-71423496 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 424-535
Cow position: chr3:81277520-81277409 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 424-543
Cow position: chr3:48810697-48810578 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-552
Cow position: chr3:15228875-15228747 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-552
Cow position: chr3:72503950-72503819 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 425-526
Cow position: chr3:1517563-1517462 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-527
Cow position: chr3:73820419-73820318 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 425-528
Cow position: chr3:3656463-3656566 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr3:11292299-11292196 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 93
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr3:11711914-11712017 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr3:4319660-4319770 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr3:53739236-53739126 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr3:57624413-57624523 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-543
Cow position: chr3:23471510-23471392 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 426-525
Cow position: chr3:27697028-27696929 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 426-527
Cow position: chr3:76268025-76267924 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 426-528
Cow position: chr3:20841923-20841821 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 426-528
Cow position: chr3:31309404-31309302 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 426-534
Cow position: chr3:17934988-17934880 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 427-528
Cow position: chr3:54100775-54100674 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 427-528
Cow position: chr3:56704370-56704269 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 427-528
Cow position: chr3:59474073-59474174 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 427-528
Cow position: chr3:74878638-74878537 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 427-529
Cow position: chr3:28908252-28908150 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 427-535
Cow position: chr3:71231347-71231454 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 427-536
Cow position: chr3:28258046-28258155 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 427-547
Cow position: chr3:71497187-71497067 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 428-526
Cow position: chr3:15443776-15443679 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 428-527
Cow position: chr3:71238106-71238204 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 431-535
Cow position: chr3:48252840-48252944 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 431-535
Cow position: chr3:57577652-57577756 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 203-354
Cow position: chr4:45367970-45367816 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 15

Conread position: 205-342
Cow position: chr4:52268093-52268226 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 76

Conread position: 209-339
Cow position: chr4:19324217-19324086 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 212-309
Cow position: chr4:45909766-45909864 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 220-422
Cow position: chr4:44782635-44782434 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 54

Conread position: 394-535
Cow position: chr4:61345956-61346095 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 399-528
Cow position: chr4:12135984-12135857 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 54, 15

Conread position: 402-528
Cow position: chr4:12591272-12591145 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 410-528
Cow position: chr4:5460910-5460792 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 417-528
Cow position: chr4:23854139-23854249 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 418-528
Cow position: chr4:33181503-33181613 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 418-528
Cow position: chr4:45775381-45775269 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 419-526
Cow position: chr4:51784140-51784246 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 420-518
Cow position: chr4:45910015-45909918 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 421-529
Cow position: chr4:32561791-32561899 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 422-535
Cow position: chr4:45636129-45636242 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 422-539
Cow position: chr4:50687898-50687783 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 423-535
Cow position: chr4:508945-508833 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 423-535
Cow position: chr4:44782339-44782450 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 423-584
Cow position: chr4:48321997-48322162 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 424-515
Cow position: chr4:39231556-39231465 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 78
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-525
Cow position: chr4:34369485-34369383 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 99, 0

Conread position: 424-528
Cow position: chr4:23445081-23444977 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr4:51920509-51920613 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr4:65175180-65175076 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr4:67393059-67393160 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 424-529
Cow position: chr4:28836501-28836606 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr4:13222219-13222111 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 424-535
Cow position: chr4:45706008-45706115 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 424-535
Cow position: chr4:48902660-48902549 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-538
Cow position: chr4:43542506-43542393 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 424-539
Cow position: chr4:45563707-45563819 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 38, 20

Conread position: 424-548
Cow position: chr4:65432115-65432239 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 425-522
Cow position: chr4:45862383-45862480 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-526
Cow position: chr4:19292687-19292788 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr4:12004184-12004283 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 425-528
Cow position: chr4:19098435-19098541 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 425-528
Cow position: chr4:32693753-32693857 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 425-528
Cow position: chr4:44773077-44772974 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 90
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr4:45626661-45626558 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr4:20878-20988 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr4:37935319-37935209 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 426-527
Cow position: chr4:46591634-46591735 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 426-529
Cow position: chr4:9925662-9925559 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 428-535
Cow position: chr4:61313244-61313137 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 429-528
Cow position: chr4:12127669-12127570 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 430-529
Cow position: chr4:45249941-45250040 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 204-339
Cow position: chr5:9859140-9859272 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 219-424
Cow position: chr5:54060565-54060367 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 126, 29

Conread position: 222-356
Cow position: chr5:55130198-55130063 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 226-356
Cow position: chr5:59872821-59872950 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 227-412
Cow position: chr5:9435704-9435893 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 53

Conread position: 228-424
Cow position: chr5:54546380-54546574 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 72

Conread position: 398-529
Cow position: chr5:6519984-6520116 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 25, 10

Conread position: 405-535
Cow position: chr5:44796754-44796624 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 9

Conread position: 417-527
Cow position: chr5:14742204-14742315 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 418-535
Cow position: chr5:57101530-57101414 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 419-528
Cow position: chr5:50101384-50101272 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 419-529
Cow position: chr5:53710696-53710586 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 419-543
Cow position: chr5:35126047-35126172 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 18

Conread position: 421-528
Cow position: chr5:47323459-47323564 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 423-525
Cow position: chr5:30949918-30949816 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-526
Cow position: chr5:4267667-4267770 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 423-527
Cow position: chr5:5855855-5855959 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr5:49501827-49501722 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 423-529
Cow position: chr5:14904072-14903965 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 423-535
Cow position: chr5:43992321-43992433 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-525
Cow position: chr5:20595463-20595564 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr5:9369272-9369169 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 424-528
Cow position: chr5:27293886-27293782 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr5:29828044-29828149 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 424-528
Cow position: chr5:35247112-35247008 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 17

Conread position: 424-528
Cow position: chr5:41165086-41165190 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr5:45273503-45273399 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr5:51935188-51935291 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 424-528
Cow position: chr5:57062531-57062427 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr5:63656475-63656578 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 424-528
Cow position: chr5:67212359-67212463 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr5:60515030-60514926 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 424-535
Cow position: chr5:48867466-48867355 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-552
Cow position: chr5:50575782-50575910 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 124, 98

Conread position: 425-514
Cow position: chr5:16938023-16937934 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 79
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 425-519
Cow position: chr5:30247523-30247429 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr5:11668187-11668083 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 425-529
Cow position: chr5:63427006-63426902 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr5:45574366-45574256 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr5:55795968-55795857 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 425-535
Cow position: chr5:58555135-58555246 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 425-552
Cow position: chr5:54311335-54311462 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 426-535
Cow position: chr5:57230338-57230229 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 428-527
Cow position: chr5:63987443-63987345 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 428-528
Cow position: chr5:2309554-2309454 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 428-529
Cow position: chr5:11562721-11562619 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 428-529
Cow position: chr5:59627102-59627203 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 430-528
Cow position: chr5:15479130-15479228 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 430-528
Cow position: chr5:29771532-29771630 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 431-535
Cow position: chr5:1396605-1396709 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 433-535
Cow position: chr5:26723455-26723556 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 171-354
Cow position: chr6:54547883-54547701 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 36, 19

Conread position: 204-310
Cow position: chr6:21869378-21869483 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 220-320
Cow position: chr6:2617959-2618060 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 220-335
Cow position: chr6:32809550-32809436 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 220-355
Cow position: chr6:37199282-37199415 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 105, 23

Conread position: 220-356
Cow position: chr6:66531534-66531668 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 403-536
Cow position: chr6:67281887-67282016 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 404-525
Cow position: chr6:54140787-54140910 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 405-535
Cow position: chr6:61142572-61142439 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 418-526
Cow position: chr6:35993590-35993698 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 419-528
Cow position: chr6:4468776-4468884 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 419-528
Cow position: chr6:47305348-47305456 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 422-535
Cow position: chr6:47339346-47339233 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 422-552
Cow position: chr6:19292808-19292941 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 423-518
Cow position: chr6:60667424-60667519 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-522
Cow position: chr6:16700271-16700371 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 423-526
Cow position: chr6:44623620-44623723 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 90
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 423-527
Cow position: chr6:38218679-38218781 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 423-535
Cow position: chr6:37149200-37149312 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 423-535
Cow position: chr6:60740025-60740137 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-525
Cow position: chr6:67728387-67728488 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-527
Cow position: chr6:582260-582158 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 424-527
Cow position: chr6:38207477-38207375 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 424-528
Cow position: chr6:2584954-2585058 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr6:57079435-57079539 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr6:62669877-62669981 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr6:64431949-64432054 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 424-529
Cow position: chr6:35181244-35181140 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 424-529
Cow position: chr6:39093761-39093868 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 424-529
Cow position: chr6:46865580-46865475 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr6:67456730-67456835 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr6:54867529-54867640 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr6:67806003-67805892 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-537
Cow position: chr6:55502778-55502891 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-542
Cow position: chr6:37783412-37783530 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-551
Cow position: chr6:17997307-17997179 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 112, 51

Conread position: 424-552
Cow position: chr6:48469012-48469140 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 425-527
Cow position: chr6:18049011-18048909 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr6:6067689-6067586 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr6:60057642-60057532 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 426-521
Cow position: chr6:23353565-23353659 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 426-526
Cow position: chr6:37395387-37395287 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 426-528
Cow position: chr6:15447184-15447082 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 426-529
Cow position: chr6:43134925-43134822 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 428-528
Cow position: chr6:4691959-4691859 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 428-528
Cow position: chr6:10176286-10176186 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 197-354
Cow position: chr7:11855071-11854918 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 73

Conread position: 229-424
Cow position: chr7:6077177-6077376 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 116
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 418-535
Cow position: chr7:50857959-50858078 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 419-528
Cow position: chr7:168657-168548 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 419-528
Cow position: chr7:57259014-57258905 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 421-524
Cow position: chr7:13218135-13218034 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 421-526
Cow position: chr7:17757045-17757149 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 421-535
Cow position: chr7:49630188-49630302 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 423-524
Cow position: chr7:24928010-24927909 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 423-525
Cow position: chr7:38429699-38429596 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 423-528
Cow position: chr7:39947236-39947131 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 423-529
Cow position: chr7:56347812-56347706 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-535
Cow position: chr7:13593782-13593893 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 423-535
Cow position: chr7:23636719-23636828 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 423-535
Cow position: chr7:24460965-24461076 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 423-535
Cow position: chr7:28563377-28563265 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-521
Cow position: chr7:41745451-41745354 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-526
Cow position: chr7:9136852-9136954 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 424-527
Cow position: chr7:8289890-8289788 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 424-527
Cow position: chr7:44454266-44454163 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr7:15739571-15739467 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr7:19981832-19981728 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr7:24220682-24220786 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr7:9816012-9816116 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 424-529
Cow position: chr7:37455332-37455437 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr7:47931782-47931677 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr7:1761745-1761856 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr7:8089180-8089290 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 9

Conread position: 424-535
Cow position: chr7:11015696-11015807 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr7:19414437-19414326 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr7:29505129-29505240 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr7:48406481-48406368 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 425-513
Cow position: chr7:10885978-10886066 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 77
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-525
Cow position: chr7:11176714-11176614 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 65

Conread position: 425-528
Cow position: chr7:16022310-16022413 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 427-528
Cow position: chr7:56081613-56081714 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 427-528
Cow position: chr7:66894522-66894421 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 427-535
Cow position: chr7:14524496-14524604 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 427-535
Cow position: chr7:24869629-24869520 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 427-552
Cow position: chr7:25512106-25511982 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 429-528
Cow position: chr7:18388380-18388281 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 430-535
Cow position: chr7:1792428-1792323 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 431-526
Cow position: chr7:11783407-11783312 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 431-528
Cow position: chr7:14499315-14499218 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 140-334
Cow position: chr8:48010276-48010481 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 17

Conread position: 198-320
Cow position: chr8:29263035-29262915 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 204-349
Cow position: chr8:45127429-45127572 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 220-360
Cow position: chr8:34478336-34478196 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 44, 61

Conread position: 220-424
Cow position: chr8:24471935-24471736 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 99

Conread position: 226-374
Cow position: chr8:35967410-35967560 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 121

Conread position: 371-515
Cow position: chr8:11722568-11722423 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 104, 0

Conread position: 401-536
Cow position: chr8:37882305-37882440 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 404-527
Cow position: chr8:18730408-18730533 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 406-529
Cow position: chr8:37292124-37292002 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 410-529
Cow position: chr8:20409658-20409776 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 412-535
Cow position: chr8:47461828-47461953 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 418-528
Cow position: chr8:11278128-11278018 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 94
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 418-535
Cow position: chr8:24328877-24328761 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 42

Conread position: 423-522
Cow position: chr8:1187903-1188002 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr8:2163920-2163817 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 423-528
Cow position: chr8:4525063-4525168 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr8:4552766-4552661 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr8:8097285-8097180 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr8:28209964-28210069 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr8:49659111-49659215 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 423-529
Cow position: chr8:36729651-36729757 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 423-529
Cow position: chr8:43104312-43104206 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 71

Conread position: 423-535
Cow position: chr8:26304409-26304297 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 423-552
Cow position: chr8:13723391-13723518 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 424-521
Cow position: chr8:58520276-58520374 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 424-526
Cow position: chr8:53429758-53429860 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr8:537930-537826 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr8:17180051-17179947 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr8:20582705-20582601 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr8:20657379-20657275 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr8:20926655-20926544 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 424-528
Cow position: chr8:32192673-32192777 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr8:40143869-40143765 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr8:43163720-43163616 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr8:19642451-19642556 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr8:28228228-28228333 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr8:36829871-36829766 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr8:37347472-37347367 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 92
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr8:40930286-40930390 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 424-535
Cow position: chr8:642591-642483 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 424-535
Cow position: chr8:4500475-4500586 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr8:10846222-10846333 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr8:29026654-29026543 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr8:45245048-45244937 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr8:45879020-45879128 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 424-535
Cow position: chr8:45925602-45925710 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 424-535
Cow position: chr8:53251720-53251609 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-552
Cow position: chr8:21600429-21600557 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-553
Cow position: chr8:30324306-30324435 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-553
Cow position: chr8:61443232-61443102 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 124, 0

Conread position: 425-523
Cow position: chr8:48513029-48512931 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-525
Cow position: chr8:19011811-19011711 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-529
Cow position: chr8:36489853-36489957 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr8:21911620-21911730 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr8:31762838-31762727 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 425-535
Cow position: chr8:55283789-55283898 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 425-536
Cow position: chr8:45127719-45127608 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 426-528
Cow position: chr8:40579429-40579327 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 426-535
Cow position: chr8:25388125-25388232 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 427-529
Cow position: chr8:37571718-37571616 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 38

Conread position: 428-520
Cow position: chr8:12795811-12795903 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 428-535
Cow position: chr8:14947309-14947202 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 434-535
Cow position: chr8:53633230-53633129 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 166-310
Cow position: chr9:8822575-8822435 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 195-330
Cow position: chr9:39681109-39681249 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 204-354
Cow position: chr9:55084515-55084356 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 220-363
Cow position: chr9:7951848-7951704 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 60, 124

Conread position: 221-361
Cow position: chr9:36849465-36849605 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 121, 59

Conread position: 226-423
Cow position: chr9:17310789-17310599 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 54, 80

Conread position: 228-354
Cow position: chr9:61966179-61966308 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 380-535
Cow position: chr9:25628186-25628031 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 67

Conread position: 381-522
Cow position: chr9:5072737-5072879 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 404-528
Cow position: chr9:22443550-22443674 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 23, 14

Conread position: 405-528
Cow position: chr9:11304003-11304122 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 405-528
Cow position: chr9:11313435-11313557 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 405-528
Cow position: chr9:35105713-35105837 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 405-535
Cow position: chr9:15225222-15225350 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 415-535
Cow position: chr9:23295259-23295379 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 417-519
Cow position: chr9:47469976-47469873 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 418-527
Cow position: chr9:8534626-8534736 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 418-543
Cow position: chr9:22318412-22318286 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 62, 10

Conread position: 419-535
Cow position: chr9:5110920-5110804 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 419-535
Cow position: chr9:28354580-28354463 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 422-527
Cow position: chr9:52407223-52407118 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr9:34484653-34484548 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 423-529
Cow position: chr9:8998407-8998301 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 423-529
Cow position: chr9:52763702-52763808 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 423-535
Cow position: chr9:10650242-10650353 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 423-535
Cow position: chr9:24652462-24652350 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 423-552
Cow position: chr9:18217041-18217170 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 423-552
Cow position: chr9:19714138-19714009 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 21

Conread position: 424-525
Cow position: chr9:55321694-55321593 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr9:5327315-5327211 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr9:6840050-6839946 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr9:8992122-8992226 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr9:9552147-9552043 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr9:11123428-11123530 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 424-528
Cow position: chr9:22433872-22433975 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 424-528
Cow position: chr9:25546697-25546593 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr9:42445926-42446030 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr9:49417044-49416940 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr9:56032258-56032362 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr9:58368940-58369043 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 424-528
Cow position: chr9:63784857-63784961 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr9:42062158-42062051 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 92
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 424-529
Cow position: chr9:48017038-48016932 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 424-535
Cow position: chr9:32676734-32676623 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr9:33347433-33347544 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr9:34284011-34283899 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 424-535
Cow position: chr9:42478425-42478536 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr9:47214488-47214599 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 95
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr9:52513391-52513502 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-552
Cow position: chr9:41283072-41282944 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 425-526
Cow position: chr9:5509780-5509679 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr9:17411137-17411240 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr9:19493410-19493513 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr9:26403841-26403738 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr9:26477272-26477169 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr9:29185081-29185184 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr9:31098828-31098933 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 425-528
Cow position: chr9:51566439-51566542 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr9:55532870-55532767 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr9:4646269-4646379 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr9:41781710-41781600 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 426-528
Cow position: chr9:59386714-59386816 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 426-543
Cow position: chr9:38289271-38289384 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 427-528
Cow position: chr9:7805907-7806008 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 427-528
Cow position: chr9:35375479-35375379 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 427-535
Cow position: chr9:43342383-43342277 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 428-528
Cow position: chr9:9753338-9753438 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 428-528
Cow position: chr9:33598039-33597939 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 428-529
Cow position: chr9:35167229-35167128 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 428-543
Cow position: chr9:25375683-25375797 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 428-563
Cow position: chr9:40005527-40005391 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 102, 121

Conread position: 430-535
Cow position: chr9:16300518-16300623 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 142-349
Cow position: chrX:7910774-7910980 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 41, 31

Conread position: 191-424
Cow position: chrX:11582549-11582313 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 37, 13

Conread position: 204-324
Cow position: chrX:35848986-35848864 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 204-340
Cow position: chrX:40531788-40531922 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 76, 10

Conread position: 204-341
Cow position: chrX:19011841-19011707 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 204-354
Cow position: chrX:9416419-9416573 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 79, 14

Conread position: 204-354
Cow position: chrX:41270727-41270875 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 75

Conread position: 205-353
Cow position: chrX:27689348-27689200 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 13

Conread position: 220-323
Cow position: chrX:15545428-15545532 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 220-340
Cow position: chrX:616016-616138 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 220-340
Cow position: chrX:42482566-42482686 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 220-373
Cow position: chrX:38226542-38226693 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 133, 59

Conread position: 220-395
Cow position: chrX:33865074-33865247 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 220-396
Cow position: chrX:33151702-33151868 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 220-424
Cow position: chrX:11454754-11454957 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 125, 55

Conread position: 226-354
Cow position: chrX:42164629-42164505 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 115, 56

Conread position: 386-528
Cow position: chrX:11653727-11653873 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 38

Conread position: 398-535
Cow position: chrX:16575084-16575222 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 102
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 401-535
Cow position: chrX:21665265-21665131 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 14

Conread position: 403-528
Cow position: chrX:29478705-29478826 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 404-521
Cow position: chrX:22915059-22914944 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 405-528
Cow position: chrX:27511408-27511531 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 405-529
Cow position: chrX:12095794-12095668 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 409-535
Cow position: chrX:42855443-42855568 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 417-525
Cow position: chrX:39180241-39180133 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 6

Conread position: 417-529
Cow position: chrX:7648418-7648306 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 419-528
Cow position: chrX:29553279-29553388 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 419-529
Cow position: chrX:6407539-6407647 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 43

Conread position: 422-535
Cow position: chrX:37955844-37955957 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chrX:29289576-29289681 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chrX:29733594-29733489 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chrX:36866171-36866276 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chrX:41068723-41068828 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chrX:46587820-46587925 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 423-535
Cow position: chrX:7277909-7278021 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 423-535
Cow position: chrX:7710541-7710429 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-535
Cow position: chrX:27394028-27393916 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 423-535
Cow position: chrX:33654846-33654734 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-535
Cow position: chrX:42492525-42492413 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 423-536
Cow position: chrX:38218712-38218825 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-514
Cow position: chrX:1572140-1572050 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 77
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-525
Cow position: chrX:11717784-11717683 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-527
Cow position: chrX:4645914-4645811 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-527
Cow position: chrX:21327910-21328015 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 424-528
Cow position: chrX:20743603-20743707 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chrX:25411906-25412010 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chrX:27075052-27074948 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chrX:35275985-35276088 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 424-528
Cow position: chrX:37129268-37129372 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chrX:38964107-38964211 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chrX:40680613-40680717 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 91
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chrX:41027159-41027262 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 424-528
Cow position: chrX:42247183-42247079 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chrX:5872316-5872421 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chrX:42450015-42449910 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 92
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chrX:45875391-45875496 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chrX:46433490-46433595 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-534
Cow position: chrX:37119595-37119702 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 424-535
Cow position: chrX:31442830-31442719 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chrX:31829462-31829351 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-543
Cow position: chrX:1499664-1499784 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 424-552
Cow position: chrX:29601829-29601701 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 425-529
Cow position: chrX:24331777-24331880 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 425-535
Cow position: chrX:3806682-3806792 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 426-525
Cow position: chrX:27685249-27685349 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 426-526
Cow position: chrX:11856431-11856531 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 426-528
Cow position: chrX:11656082-11656184 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 83
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 426-528
Cow position: chrX:19943233-19943133 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 426-528
Cow position: chrX:25035381-25035279 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 83
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 426-528
Cow position: chrX:46532494-46532392 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 83
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 426-535
Cow position: chrX:161413-161522 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 426-535
Cow position: chrX:36514892-36514782 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 427-528
Cow position: chrX:27261193-27261295 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 427-528
Cow position: chrX:31294570-31294469 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 427-535
Cow position: chrX:39220081-39220189 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 427-535
Cow position: chrX:43730221-43730114 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 428-527
Cow position: chrX:28878171-28878072 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 428-535
Cow position: chrX:6690257-6690150 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 430-528
Cow position: chrX:34502925-34503023 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 81
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 430-529
Cow position: chrX:44054807-44054906 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 430-535
Cow position: chrX:1122538-1122437 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 431-528
Cow position: chrX:27705593-27705689 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 431-528
Cow position: chrX:37665697-37665794 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 433-539
Cow position: chrX:25459726-25459622 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 0