Cow genome map
| Conread name: | Pig4-TMW8055H05 |
| Conread position: | 618-834 |
| Cow position: | chr10:59001415-59001633 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 130, 61 |
| Conread position: | 618-856 |
| Cow position: | chr10:25478412-25478173 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 127, 26 |
| Conread position: | 619-847 |
| Cow position: | chr10:63650841-63651073 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 127, 22 |
| Conread position: | 621-840 |
| Cow position: | chr10:54155642-54155867 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 191 |
| Conread position: | 625-836 |
| Cow position: | chr10:4553029-4553243 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 118, 63 |
| Conread position: | 625-842 |
| Cow position: | chr10:4362070-4362291 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 71, 174 |
| Conread position: | 630-836 |
| Cow position: | chr10:22775577-22775375 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 58 |
| Conread position: | 631-831 |
| Cow position: | chr10:3733690-3733894 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 102, 58 |
| Conread position: | 630-831 |
| Cow position: | chr12:35538289-35538085 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 117, 137 |
| Conread position: | 618-850 |
| Cow position: | chr13:46717802-46718034 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 129, 26 |
| Conread position: | 625-840 |
| Cow position: | chr13:34502212-34501992 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 122, 184 |
| Conread position: | 617-844 |
| Cow position: | chr14:14318287-14318059 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 60, 122 |
| Conread position: | 622-836 |
| Cow position: | chr14:32739339-32739128 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 625-836 |
| Cow position: | chr14:18127190-18126975 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 617-843 |
| Cow position: | chr15:15121615-15121843 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 130, 180 |
| Conread position: | 618-788 |
| Cow position: | chr15:8261418-8261245 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 618-841 |
| Cow position: | chr15:50946678-50946450 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 34, 206 |
| Conread position: | 618-851 |
| Cow position: | chr15:52654013-52654249 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 126, 64 |
| Conread position: | 625-836 |
| Cow position: | chr15:25254111-25254322 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 122, 54 |
| Conread position: | 602-842 |
| Cow position: | chr16:26693037-26692799 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 77, 17 |
| Conread position: | 626-840 |
| Cow position: | chr16:31055841-31056058 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 675-841 |
| Cow position: | chr16:18431576-18431407 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 609-831 |
| Cow position: | chr18:54279882-54279661 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 618-836 |
| Cow position: | chr18:24714006-24714226 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 129, 31 |
| Conread position: | 625-807 |
| Cow position: | chr18:44465177-44464988 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 625-841 |
| Cow position: | chr2:16247500-16247280 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 80, 54 |
| Conread position: | 626-836 |
| Cow position: | chr2:8775658-8775446 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 121, 52 |
| Conread position: | 609-836 |
| Cow position: | chr20:29571167-29570939 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 78, 35 |
| Conread position: | 618-840 |
| Cow position: | chr20:3395094-3394872 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 126, 83 |
| Conread position: | 625-831 |
| Cow position: | chr20:28061614-28061823 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 58, 173 |
| Conread position: | 625-840 |
| Cow position: | chr21:45301184-45300973 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 123, 13 |
| Conread position: | 629-874 |
| Cow position: | chr21:3219579-3219330 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 107, 60 |
| Conread position: | 240-886 |
| Cow position: | chr22:11964839-11965482 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 38 |
| Conread position: | 618-841 |
| Cow position: | chr22:37186376-37186154 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 126, 57 |
| Conread position: | 619-829 |
| Cow position: | chr22:28808057-28807845 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 124, 188 |
| Conread position: | 618-836 |
| Cow position: | chr23:29025320-29025095 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 625-836 |
| Cow position: | chr23:4540145-4539935 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 122, 164 |
| Conread position: | 625-850 |
| Cow position: | chr25:22709917-22709686 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 33 |
| Conread position: | 618-840 |
| Cow position: | chr26:27506466-27506241 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 71, 150 |
| Conread position: | 625-836 |
| Cow position: | chr26:26474092-26473883 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 65, 30 |
| Conread position: | 618-836 |
| Cow position: | chr27:29016832-29016617 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 72, 130 |
| Conread position: | 617-878 |
| Cow position: | chr28:14450608-14450339 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 67, 189 |
| Conread position: | 618-841 |
| Cow position: | chr28:22841767-22841541 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 129, 191 |
| Conread position: | 636-831 |
| Cow position: | chr28:23233441-23233242 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 73, 163 |
| Conread position: | 623-836 |
| Cow position: | chr29:45388054-45387841 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 122, 39 |
| Conread position: | 625-840 |
| Cow position: | chr29:24398295-24398079 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 120, 67 |
| Conread position: | 625-848 |
| Cow position: | chr29:44590022-44590249 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 122, 100 |
| Conread position: | 633-848 |
| Cow position: | chr29:40447379-40447600 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 113, 55 |
| Conread position: | 606-858 |
| Cow position: | chr3:69060675-69060431 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 618-841 |
| Cow position: | chr3:12752685-12752911 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 58, 192 |
| Conread position: | 618-842 |
| Cow position: | chr3:8401572-8401344 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 621-842 |
| Cow position: | chr3:38029910-38030133 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 126, 58 |
| Conread position: | 625-840 |
| Cow position: | chr3:3665504-3665286 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 88, 184 |
| Conread position: | 629-835 |
| Cow position: | chr3:29264195-29264404 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 155 |
| Conread position: | 618-827 |
| Cow position: | chr4:15759605-15759815 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 126, 182 |
| Conread position: | 618-836 |
| Cow position: | chr4:41660997-41660782 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 175, 70 |
| Conread position: | 625-834 |
| Cow position: | chr4:49836324-49836534 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 122, 91 |
| Conread position: | 625-851 |
| Cow position: | chr4:34731869-34732098 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 90 |
| Conread position: | 630-836 |
| Cow position: | chr4:16838707-16838915 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 60, 77 |
| Conread position: | 618-834 |
| Cow position: | chr5:29695872-29695649 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 618-836 |
| Cow position: | chr5:24600845-24601062 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 113, 72 |
| Conread position: | 618-840 |
| Cow position: | chr5:28989160-28988937 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 58, 177 |
| Conread position: | 618-840 |
| Cow position: | chr6:42473380-42473605 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 50, 44 |
| Conread position: | 630-834 |
| Cow position: | chr6:44577920-44577717 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 119, 27 |
| Conread position: | 618-839 |
| Cow position: | chr7:21405254-21405028 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 95 |
| Conread position: | 625-840 |
| Cow position: | chr7:4757836-4758052 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 122, 68 |
| Conread position: | 630-841 |
| Cow position: | chr7:66693654-66693444 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 11, 50 |
| Conread position: | 675-849 |
| Cow position: | chr7:11361793-11361971 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 618-834 |
| Cow position: | chr8:53944599-53944824 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 618-841 |
| Cow position: | chr8:48411721-48411495 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 129, 196 |
| Conread position: | 585-841 |
| Cow position: | chrX:40771380-40771127 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 161, 23 |
| Conread position: | 618-856 |
| Cow position: | chrX:5382246-5382005 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 20 |
| Conread position: | 625-836 |
| Cow position: | chrX:37340270-37340047 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 0 |