Cow genome map
| Conread name: | Pla1-C0000023_G13 |
| Conread position: | 1-270 |
| Cow position: | chr10:16653005-16653274 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 70, 61 |
| Conread position: | 3-269 |
| Cow position: | chr10:14339332-14339598 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 96, 86 |
| Conread position: | 7-253 |
| Cow position: | chr10:22284834-22285080 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 112, 125 |
| Conread position: | 8-269 |
| Cow position: | chr10:14296649-14296910 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-283 |
| Cow position: | chr11:74322739-74323018 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 260, 0 |
| Conread position: | 1-289 |
| Cow position: | chr11:74337685-74337397 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-293 |
| Cow position: | chr11:74294487-74294198 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 258, 0 |
| Conread position: | 1-296 |
| Cow position: | chr11:74359966-74359671 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-268 |
| Cow position: | chr11:74302898-74303163 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-268 |
| Cow position: | chr11:74315305-74315040 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-273 |
| Cow position: | chr11:75219750-75219488 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 255, 0 |
| Conread position: | 8-277 |
| Cow position: | chr11:75235311-75235045 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 194 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 255, 0 |
| Conread position: | 8-287 |
| Cow position: | chr11:75247183-75246907 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 0 |
| Conread position: | 11-221 |
| Cow position: | chr18:30657909-30657696 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 196, 0 |
| Conread position: | 3-266 |
| Cow position: | chr19:20703880-20704143 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 14, 22 |
| Conread position: | 3-276 |
| Cow position: | chr19:20837519-20837794 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 14, 22 |
| Conread position: | 3-289 |
| Cow position: | chr19:18456130-18456413 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 66, 57 |
| Conread position: | 4-253 |
| Cow position: | chr19:18513600-18513849 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 213, 205 |
| Conread position: | 4-262 |
| Cow position: | chr19:18678871-18679129 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 65, 51 |
| Conread position: | 4-289 |
| Cow position: | chr19:18693942-18694224 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 65, 57 |
| Conread position: | 4-307 |
| Cow position: | chr19:18495273-18495573 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 289, 261 |
| Conread position: | 4-307 |
| Cow position: | chr19:18715820-18716122 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 288, 260 |
| Conread position: | 7-266 |
| Cow position: | chr19:18481413-18481672 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-262 |
| Cow position: | chr19:18445823-18446076 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 67, 52 |
| Conread position: | 9-263 |
| Cow position: | chr19:20692480-20692734 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 7, 16 |
| Conread position: | 3-315 |
| Cow position: | chr2:86441994-86441681 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 261, 81 |
| Conread position: | 4-289 |
| Cow position: | chr2:86480129-86480411 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 261, 0 |
| Conread position: | 7-290 |
| Cow position: | chr2:86493525-86493805 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 200, 215 |
| Conread position: | 1-289 |
| Cow position: | chr23:24609604-24609319 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 250, 0 |
| Conread position: | 3-205 |
| Cow position: | chr25:23329651-23329853 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 31-293 |
| Cow position: | chr25:34486951-34487210 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 231, 0 |
| Conread position: | 32-247 |
| Cow position: | chr25:23353241-23353026 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-211 |
| Cow position: | chr29:21188186-21188394 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 126, 136 |
| Conread position: | 3-253 |
| Cow position: | chr29:21176959-21177209 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-289 |
| Cow position: | chr29:21207754-21208037 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 126, 136 |
| Conread position: | 5-257 |
| Cow position: | chr29:18876993-18876737 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 4-274 |
| Cow position: | chr3:19766794-19767065 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 134, 122 |
| Conread position: | 4-273 |
| Cow position: | chr4:58712882-58712611 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 122, 128 |
| Conread position: | 6-253 |
| Cow position: | chr4:58669165-58668918 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 206, 225 |
| Conread position: | 6-291 |
| Cow position: | chr5:26164973-26165255 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 249, 0 |
| Conread position: | 9-269 |
| Cow position: | chr5:26091917-26092177 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-291 |
| Cow position: | chr5:26181455-26181731 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 243, 0 |
| Conread position: | 1-296 |
| Cow position: | chr7:32802452-32802159 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 208 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 7, 262 |
| Conread position: | 1-318 |
| Cow position: | chr7:32786011-32785694 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 219 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 7, 262 |
| Conread position: | 3-264 |
| Cow position: | chr7:32696249-32696510 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-199 |
| Cow position: | chr7:8766688-8766493 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-253 |
| Cow position: | chr7:54143827-54143581 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 112, 125 |
| Conread position: | 7-273 |
| Cow position: | chr7:8781937-8781669 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 248, 0 |
| Conread position: | 9-207 |
| Cow position: | chr7:32741855-32741657 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-208 |
| Cow position: | chr7:32747994-32747797 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-221 |
| Cow position: | chr7:32757282-32757069 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 196, 0 |
| Conread position: | 11-221 |
| Cow position: | chr7:32765151-32764938 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 152, 162 |
| Conread position: | 11-313 |
| Cow position: | chr7:32688266-32687965 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 197, 209 |
| Conread position: | 22-290 |
| Cow position: | chr7:32730765-32730500 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 182, 210 |
| Conread position: | 31-254 |
| Cow position: | chr7:7292570-7292347 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 171, 194 |
| Conread position: | 31-290 |
| Cow position: | chr7:8794196-8793940 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 231, 0 |
| Conread position: | 31-299 |
| Cow position: | chr7:8731136-8730872 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 176, 191 |
| Conread position: | 33-290 |
| Cow position: | chr7:32773906-32774160 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 33-299 |
| Cow position: | chr7:7196899-7197161 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 212, 0 |
| Conread position: | 34-290 |
| Cow position: | chr7:7224910-7225163 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 196, 185 |
| Conread position: | 44-261 |
| Cow position: | chr7:26857534-26857317 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 32, 22 |
| Conread position: | 4-199 |
| Cow position: | chrX:16725727-16725921 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 32-290 |
| Cow position: | chrX:16704816-16705071 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 197, 187 |
| Conread position: | 32-290 |
| Cow position: | chrX:16713103-16713358 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 219, 0 |
| Conread position: | 33-199 |
| Cow position: | chrX:16740339-16740505 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 33-261 |
| Cow position: | chrX:16705332-16705559 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 196, 186 |
| Conread position: | 33-290 |
| Cow position: | chrX:16705710-16705964 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 196, 186 |